View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7224_low_9 (Length: 388)

Name: NF7224_low_9
Description: NF7224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7224_low_9
NF7224_low_9
[»] scaffold0302 (2 HSPs)
scaffold0302 (11-376)||(7070-7435)
scaffold0302 (11-376)||(128-493)
[»] scaffold0225 (1 HSPs)
scaffold0225 (11-376)||(25311-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (11-376)||(14825-15190)
scaffold0162 (11-376)||(11198-11563)
[»] chr8 (32 HSPs)
chr8 (11-376)||(16875559-16875924)
chr8 (11-376)||(21848801-21849166)
chr8 (11-376)||(20650819-20651184)
chr8 (11-376)||(22436255-22436620)
chr8 (11-376)||(23155506-23155869)
chr8 (11-352)||(21195004-21195344)
chr8 (28-351)||(23902141-23902464)
chr8 (52-306)||(24631171-24631425)
chr8 (34-117)||(16414302-16414385)
chr8 (109-339)||(22422454-22422684)
chr8 (113-339)||(22988719-22988945)
chr8 (178-339)||(22131672-22131833)
chr8 (109-308)||(20394695-20394894)
chr8 (109-339)||(23652030-23652260)
chr8 (159-320)||(17672635-17672796)
chr8 (159-339)||(18858566-18858746)
chr8 (109-287)||(22376015-22376193)
chr8 (159-320)||(20016875-20017036)
chr8 (271-351)||(22317158-22317238)
chr8 (227-339)||(15535372-15535484)
chr8 (227-339)||(30311824-30311936)
chr8 (107-339)||(31569402-31569634)
chr8 (67-198)||(23887158-23887289)
chr8 (240-338)||(19482757-19482855)
chr8 (109-339)||(19979956-19980186)
chr8 (227-320)||(19114698-19114791)
chr8 (135-260)||(20390167-20390292)
chr8 (67-203)||(19869818-19869954)
chr8 (227-339)||(21920428-21920540)
chr8 (178-320)||(32602152-32602295)
chr8 (172-320)||(21323904-21324051)
chr8 (159-339)||(22041816-22041996)
[»] chr7 (44 HSPs)
chr7 (11-376)||(7825775-7826140)
chr7 (11-376)||(27105804-27106169)
chr7 (11-376)||(27172156-27172521)
chr7 (11-353)||(4441826-4442168)
chr7 (11-351)||(13457935-13458275)
chr7 (11-351)||(17925550-17925890)
chr7 (11-167)||(13378969-13379123)
chr7 (24-351)||(15716946-15717273)
chr7 (58-333)||(17143353-17143628)
chr7 (256-352)||(14938245-14938341)
chr7 (256-352)||(15365838-15365934)
chr7 (107-339)||(48813378-48813609)
chr7 (170-339)||(11770430-11770599)
chr7 (159-320)||(11235391-11235552)
chr7 (107-320)||(11386533-11386746)
chr7 (159-320)||(14334327-14334488)
chr7 (159-320)||(15159235-15159396)
chr7 (227-339)||(12689414-12689526)
chr7 (107-339)||(15626437-15626669)
chr7 (124-251)||(15122170-15122297)
chr7 (169-320)||(16948638-16948789)
chr7 (227-337)||(15596-15706)
chr7 (159-320)||(8709536-8709697)
chr7 (178-339)||(11551299-11551460)
chr7 (107-320)||(19614607-19614820)
chr7 (107-260)||(26092902-26093055)
chr7 (13-221)||(39178-39386)
chr7 (107-263)||(12204904-12205060)
chr7 (227-339)||(14956466-14956578)
chr7 (227-339)||(15147131-15147243)
chr7 (107-263)||(19149200-19149356)
chr7 (107-263)||(20748599-20748755)
chr7 (169-320)||(10872621-10872772)
chr7 (169-320)||(13023289-13023440)
chr7 (159-338)||(44789529-44789708)
chr7 (107-260)||(26116694-26116847)
chr7 (107-260)||(49154293-49154446)
chr7 (107-263)||(14139668-14139824)
chr7 (107-263)||(23503974-23504130)
chr7 (159-266)||(13688026-13688133)
chr7 (107-266)||(13966772-13966931)
chr7 (169-319)||(13675385-13675535)
chr7 (107-191)||(14262349-14262433)
chr7 (107-263)||(18052057-18052213)
[»] chr6 (39 HSPs)
chr6 (11-376)||(16380539-16380904)
chr6 (11-376)||(1646980-1647345)
chr6 (11-376)||(16648135-16648500)
chr6 (11-376)||(23997998-23998363)
chr6 (11-376)||(14130219-14130584)
chr6 (11-376)||(16099759-16100130)
chr6 (11-377)||(23025912-23026257)
chr6 (194-376)||(18836257-18836439)
chr6 (234-376)||(18577959-18578101)
chr6 (234-376)||(19985805-19985947)
chr6 (256-376)||(16234778-16234898)
chr6 (256-351)||(21928979-21929074)
chr6 (149-339)||(18965599-18965789)
chr6 (159-338)||(2873117-2873296)
chr6 (124-339)||(18406223-18406438)
chr6 (67-254)||(23085993-23086180)
chr6 (22-178)||(14643664-14643817)
chr6 (124-337)||(23080258-23080471)
chr6 (159-320)||(24294096-24294257)
chr6 (227-339)||(22828737-22828849)
chr6 (107-266)||(19881158-19881317)
chr6 (169-305)||(14378240-14378376)
chr6 (169-305)||(14379790-14379926)
chr6 (159-339)||(18196047-18196227)
chr6 (159-339)||(19866474-19866654)
chr6 (124-339)||(20634219-20634434)
chr6 (155-260)||(19487582-19487687)
chr6 (124-317)||(22760734-22760927)
chr6 (229-338)||(28261581-28261690)
chr6 (229-338)||(28284226-28284335)
chr6 (229-338)||(28340330-28340439)
chr6 (227-339)||(27564215-27564327)
chr6 (124-339)||(25608140-25608355)
chr6 (240-326)||(18796490-18796576)
chr6 (240-338)||(27189224-27189322)
chr6 (240-338)||(27259918-27260016)
chr6 (127-376)||(34643868-34644117)
chr6 (169-265)||(15461197-15461293)
chr6 (227-339)||(16926020-16926132)
[»] chr5 (31 HSPs)
chr5 (11-376)||(23507484-23507849)
chr5 (11-376)||(21935391-21935756)
chr5 (11-376)||(24583010-24583375)
chr5 (271-376)||(23505044-23505149)
chr5 (59-188)||(20250535-20250664)
chr5 (108-254)||(21409074-21409220)
chr5 (67-339)||(20466358-20466630)
chr5 (109-339)||(23473082-23473312)
chr5 (159-320)||(14998090-14998251)
chr5 (159-320)||(37289847-37290008)
chr5 (159-320)||(22136542-22136703)
chr5 (159-320)||(22331238-22331399)
chr5 (159-320)||(27612228-27612389)
chr5 (159-338)||(40710636-40710815)
chr5 (227-337)||(22349776-22349886)
chr5 (159-320)||(27520280-27520441)
chr5 (229-338)||(27666911-27667020)
chr5 (124-320)||(29474389-29474585)
chr5 (109-320)||(21337595-21337806)
chr5 (124-339)||(25428288-25428503)
chr5 (169-251)||(22463876-22463958)
chr5 (159-320)||(41772716-41772877)
chr5 (227-339)||(18780969-18781081)
chr5 (229-320)||(19771834-19771925)
chr5 (178-320)||(16358376-16358518)
chr5 (109-339)||(26737028-26737258)
chr5 (178-320)||(34568368-34568510)
chr5 (169-266)||(20344192-20344289)
chr5 (169-198)||(20777891-20777920)
chr5 (107-260)||(21562323-21562476)
chr5 (159-320)||(27683751-27683912)
[»] chr3 (47 HSPs)
chr3 (11-376)||(30139321-30139686)
chr3 (11-376)||(30148872-30149237)
chr3 (11-376)||(8272659-8273024)
chr3 (11-376)||(15611618-15611983)
chr3 (11-369)||(6151113-6151471)
chr3 (11-376)||(13965612-13965978)
chr3 (11-376)||(25767833-25768198)
chr3 (11-317)||(15948730-15949036)
chr3 (256-376)||(12795751-12795871)
chr3 (256-377)||(18915240-18915361)
chr3 (260-376)||(16258658-16258774)
chr3 (199-338)||(6710865-6711004)
chr3 (256-376)||(55514237-55514357)
chr3 (159-339)||(15340811-15340991)
chr3 (159-339)||(15400925-15401105)
chr3 (124-320)||(15723307-15723503)
chr3 (109-339)||(15261172-15261402)
chr3 (132-257)||(55498486-55498611)
chr3 (172-320)||(11950318-11950466)
chr3 (107-254)||(11889636-11889783)
chr3 (276-375)||(18751459-18751558)
chr3 (159-320)||(13254251-13254412)
chr3 (127-320)||(14874875-14875068)
chr3 (159-320)||(15346653-15346814)
chr3 (178-339)||(16693706-16693867)
chr3 (227-339)||(6602278-6602390)
chr3 (169-320)||(20060472-20060623)
chr3 (172-339)||(41179074-41179241)
chr3 (223-320)||(10007161-10007258)
chr3 (107-320)||(14088244-14088457)
chr3 (107-320)||(15014112-15014325)
chr3 (227-340)||(16805423-16805536)
chr3 (107-260)||(28755949-28756102)
chr3 (169-320)||(15587810-15587961)
chr3 (229-338)||(5423408-5423517)
chr3 (223-320)||(10907771-10907868)
chr3 (107-320)||(13970465-13970678)
chr3 (159-338)||(16755109-16755288)
chr3 (229-320)||(48427008-48427099)
chr3 (178-320)||(16637334-16637476)
chr3 (11-41)||(17200484-17200514)
chr3 (256-338)||(53383523-53383605)
chr3 (229-338)||(3687486-3687595)
chr3 (169-266)||(16328067-16328164)
chr3 (220-320)||(12179909-12180009)
chr3 (240-320)||(12359005-12359085)
chr3 (89-265)||(13318829-13319005)
[»] chr1 (26 HSPs)
chr1 (11-376)||(20829485-20829850)
chr1 (11-339)||(20926992-20927320)
chr1 (11-350)||(41215949-41216288)
chr1 (11-183)||(20527147-20527319)
chr1 (37-350)||(21200998-21201311)
chr1 (19-125)||(22133857-22133963)
chr1 (11-80)||(35930918-35930987)
chr1 (159-320)||(21838907-21839068)
chr1 (159-320)||(21832259-21832420)
chr1 (159-320)||(33389270-33389431)
chr1 (159-320)||(51331734-51331895)
chr1 (178-339)||(19108306-19108467)
chr1 (107-260)||(31538186-31538339)
chr1 (107-260)||(37679097-37679250)
chr1 (107-260)||(48424921-48425074)
chr1 (107-260)||(52987789-52987942)
chr1 (169-251)||(20855011-20855093)
chr1 (119-337)||(21862574-21862792)
chr1 (240-338)||(41351984-41352082)
chr1 (229-338)||(16348907-16349016)
chr1 (178-339)||(17043275-17043436)
chr1 (227-320)||(21026130-21026223)
chr1 (227-339)||(21234040-21234152)
chr1 (159-339)||(24792857-24793037)
chr1 (172-305)||(20834154-20834287)
chr1 (172-320)||(24097857-24098005)
[»] scaffold0076 (2 HSPs)
scaffold0076 (11-376)||(42175-42540)
scaffold0076 (107-320)||(31797-32010)
[»] scaffold0077 (1 HSPs)
scaffold0077 (11-376)||(26290-26655)
[»] chr2 (34 HSPs)
chr2 (11-376)||(24829749-24830114)
chr2 (6-376)||(22279622-22279992)
chr2 (11-376)||(24568229-24568594)
chr2 (11-376)||(22760130-22760495)
chr2 (11-350)||(25130152-25130491)
chr2 (59-335)||(10037941-10038217)
chr2 (59-335)||(10098326-10098602)
chr2 (256-376)||(12639039-12639159)
chr2 (107-320)||(30010841-30011054)
chr2 (107-260)||(23112369-23112522)
chr2 (107-320)||(30209574-30209787)
chr2 (124-320)||(27372842-27373038)
chr2 (109-339)||(24818889-24819119)
chr2 (107-260)||(1065384-1065537)
chr2 (178-339)||(21143769-21143930)
chr2 (159-320)||(24711607-24711768)
chr2 (159-320)||(41607094-41607255)
chr2 (227-339)||(24875527-24875639)
chr2 (107-266)||(23098675-23098834)
chr2 (169-320)||(24263943-24264094)
chr2 (159-320)||(10870423-10870584)
chr2 (159-320)||(27219589-27219750)
chr2 (107-339)||(27789294-27789526)
chr2 (178-320)||(23189492-23189633)
chr2 (172-265)||(27208894-27208987)
chr2 (227-320)||(44384347-44384440)
chr2 (107-263)||(12575983-12576139)
chr2 (178-338)||(16926915-16927075)
chr2 (178-338)||(17000555-17000715)
chr2 (229-320)||(22323635-22323726)
chr2 (169-320)||(23295508-23295659)
chr2 (178-320)||(9485789-9485931)
chr2 (107-320)||(23278349-23278562)
chr2 (227-339)||(24706259-24706371)
[»] scaffold0008 (3 HSPs)
scaffold0008 (11-376)||(132513-132878)
scaffold0008 (177-376)||(25743-25942)
scaffold0008 (11-122)||(25938-26049)
[»] chr4 (26 HSPs)
chr4 (11-376)||(15291179-15291544)
chr4 (37-377)||(12340912-12341252)
chr4 (256-377)||(14999200-14999321)
chr4 (256-370)||(9292727-9292841)
chr4 (67-340)||(14696035-14696308)
chr4 (64-306)||(8322850-8323092)
chr4 (159-320)||(14301888-14302049)
chr4 (118-260)||(8707913-8708055)
chr4 (107-263)||(15323216-15323372)
chr4 (124-320)||(40474982-40475178)
chr4 (159-320)||(8051532-8051693)
chr4 (159-320)||(23957689-23957850)
chr4 (109-308)||(14849225-14849424)
chr4 (107-260)||(3262911-3263064)
chr4 (159-320)||(27713278-27713439)
chr4 (107-260)||(44659983-44660136)
chr4 (227-339)||(14682490-14682602)
chr4 (107-339)||(51604909-51605141)
chr4 (227-338)||(8388336-8388447)
chr4 (124-339)||(15145759-15145974)
chr4 (67-221)||(18547696-18547850)
chr4 (107-263)||(15072358-15072514)
chr4 (229-320)||(12478542-12478633)
chr4 (227-314)||(18225423-18225510)
chr4 (229-320)||(19776772-19776863)
chr4 (107-263)||(15001482-15001638)
[»] scaffold0124 (2 HSPs)
scaffold0124 (11-376)||(5830-6197)
scaffold0124 (220-320)||(14173-14273)
[»] scaffold0266 (1 HSPs)
scaffold0266 (11-376)||(7885-8250)
[»] scaffold0170 (1 HSPs)
scaffold0170 (11-376)||(34002-34367)
[»] scaffold0120 (2 HSPs)
scaffold0120 (11-376)||(24093-24458)
scaffold0120 (124-339)||(7974-8189)
[»] scaffold0218 (2 HSPs)
scaffold0218 (11-377)||(1976-2342)
scaffold0218 (15-351)||(26270-26605)
[»] scaffold0610 (1 HSPs)
scaffold0610 (11-376)||(6953-7318)
[»] scaffold0876 (2 HSPs)
scaffold0876 (11-376)||(970-1335)
scaffold0876 (256-376)||(4451-4571)
[»] scaffold0022 (3 HSPs)
scaffold0022 (11-371)||(8850-9210)
scaffold0022 (214-337)||(40588-40711)
scaffold0022 (214-337)||(74308-74431)
[»] scaffold1488 (1 HSPs)
scaffold1488 (11-353)||(827-1168)
[»] scaffold0387 (1 HSPs)
scaffold0387 (11-353)||(15998-16340)
[»] scaffold0692 (1 HSPs)
scaffold0692 (11-376)||(1908-2264)
[»] scaffold0021 (3 HSPs)
scaffold0021 (11-376)||(31447-31811)
scaffold0021 (69-376)||(7131-7438)
scaffold0021 (11-306)||(21871-22165)
[»] scaffold0561 (1 HSPs)
scaffold0561 (11-347)||(7029-7361)
[»] scaffold0467 (1 HSPs)
scaffold0467 (11-254)||(1645-1888)
[»] scaffold0092 (1 HSPs)
scaffold0092 (22-297)||(103-378)
[»] scaffold0369 (1 HSPs)
scaffold0369 (11-149)||(6888-7026)
[»] scaffold0635 (1 HSPs)
scaffold0635 (59-335)||(8853-9129)
[»] scaffold0269 (1 HSPs)
scaffold0269 (234-376)||(2181-2323)
[»] scaffold0244 (1 HSPs)
scaffold0244 (234-376)||(25024-25166)
[»] scaffold0462 (1 HSPs)
scaffold0462 (11-115)||(2117-2221)
[»] scaffold1486 (1 HSPs)
scaffold1486 (255-376)||(91-212)
[»] scaffold0023 (3 HSPs)
scaffold0023 (255-376)||(54210-54331)
scaffold0023 (118-340)||(2636-2858)
scaffold0023 (124-266)||(151137-151279)
[»] scaffold0011 (2 HSPs)
scaffold0011 (276-377)||(181840-181941)
scaffold0011 (109-340)||(24655-24886)
[»] scaffold0310 (1 HSPs)
scaffold0310 (256-376)||(13093-13213)
[»] scaffold0335 (1 HSPs)
scaffold0335 (256-374)||(10979-11097)
[»] scaffold0647 (1 HSPs)
scaffold0647 (107-339)||(2853-3085)
[»] scaffold0293 (1 HSPs)
scaffold0293 (118-338)||(14423-14643)
[»] scaffold0083 (1 HSPs)
scaffold0083 (67-339)||(9114-9386)
[»] scaffold0080 (1 HSPs)
scaffold0080 (159-339)||(11411-11591)
[»] scaffold0001 (1 HSPs)
scaffold0001 (109-320)||(494991-495202)
[»] scaffold0719 (1 HSPs)
scaffold0719 (33-95)||(4785-4847)
[»] scaffold0102 (1 HSPs)
scaffold0102 (256-350)||(46682-46776)
[»] scaffold0074 (1 HSPs)
scaffold0074 (109-339)||(5066-5295)
[»] scaffold0058 (2 HSPs)
scaffold0058 (76-376)||(27337-27636)
scaffold0058 (145-234)||(76482-76571)
[»] scaffold0007 (1 HSPs)
scaffold0007 (124-330)||(84656-84862)
[»] scaffold0454 (1 HSPs)
scaffold0454 (159-320)||(8911-9072)
[»] scaffold0016 (1 HSPs)
scaffold0016 (107-260)||(176464-176617)
[»] scaffold0621 (1 HSPs)
scaffold0621 (124-339)||(3386-3601)
[»] scaffold0010 (2 HSPs)
scaffold0010 (113-320)||(3887-4094)
scaffold0010 (107-260)||(40453-40606)
[»] scaffold0004 (1 HSPs)
scaffold0004 (113-260)||(201594-201741)
[»] scaffold0509 (1 HSPs)
scaffold0509 (109-263)||(10858-11012)
[»] scaffold0138 (1 HSPs)
scaffold0138 (109-339)||(7209-7439)
[»] scaffold0040 (1 HSPs)
scaffold0040 (109-266)||(16904-17061)
[»] scaffold0445 (1 HSPs)
scaffold0445 (107-339)||(1969-2201)
[»] scaffold0379 (1 HSPs)
scaffold0379 (112-339)||(6014-6241)
[»] scaffold0028 (6 HSPs)
scaffold0028 (227-374)||(16855-17002)
scaffold0028 (306-372)||(104892-104958)
scaffold0028 (227-374)||(10393-10540)
scaffold0028 (107-320)||(48634-48847)
scaffold0028 (268-310)||(94051-94093)
scaffold0028 (178-338)||(45106-45266)
[»] scaffold1602 (1 HSPs)
scaffold1602 (109-339)||(189-419)
[»] scaffold0342 (1 HSPs)
scaffold0342 (109-339)||(15343-15573)
[»] scaffold0282 (1 HSPs)
scaffold0282 (109-339)||(14601-14831)
[»] scaffold0018 (3 HSPs)
scaffold0018 (109-339)||(10863-11093)
scaffold0018 (109-339)||(17055-17285)
scaffold0018 (231-320)||(24542-24631)
[»] scaffold0270 (2 HSPs)
scaffold0270 (109-266)||(5898-6055)
scaffold0270 (109-266)||(13028-13185)
[»] scaffold0037 (1 HSPs)
scaffold0037 (178-339)||(115172-115333)
[»] scaffold0029 (2 HSPs)
scaffold0029 (107-320)||(114532-114745)
scaffold0029 (217-339)||(108041-108163)
[»] scaffold0730 (1 HSPs)
scaffold0730 (107-339)||(121-353)
[»] scaffold0585 (1 HSPs)
scaffold0585 (107-263)||(5209-5365)
[»] scaffold0431 (1 HSPs)
scaffold0431 (227-339)||(9320-9432)
[»] scaffold0403 (1 HSPs)
scaffold0403 (124-263)||(8402-8541)
[»] scaffold0190 (1 HSPs)
scaffold0190 (169-320)||(31501-31652)
[»] scaffold0122 (1 HSPs)
scaffold0122 (124-339)||(38085-38300)
[»] scaffold0006 (1 HSPs)
scaffold0006 (67-266)||(103260-103459)
[»] scaffold0465 (1 HSPs)
scaffold0465 (11-69)||(13649-13707)
[»] scaffold0319 (1 HSPs)
scaffold0319 (109-339)||(720-950)
[»] scaffold0042 (2 HSPs)
scaffold0042 (111-337)||(22661-22887)
scaffold0042 (227-339)||(38060-38172)
[»] scaffold0017 (1 HSPs)
scaffold0017 (161-339)||(195661-195839)
[»] scaffold0206 (1 HSPs)
scaffold0206 (172-265)||(25141-25234)
[»] scaffold0148 (1 HSPs)
scaffold0148 (107-316)||(974-1183)
[»] scaffold0109 (2 HSPs)
scaffold0109 (178-339)||(40107-40268)
scaffold0109 (227-339)||(14365-14477)
[»] scaffold0104 (1 HSPs)
scaffold0104 (169-305)||(24202-24338)
[»] scaffold2004 (1 HSPs)
scaffold2004 (124-339)||(946-1161)
[»] scaffold0540 (1 HSPs)
scaffold0540 (124-266)||(6468-6610)
[»] scaffold0331 (1 HSPs)
scaffold0331 (67-308)||(16058-16298)
[»] scaffold0309 (1 HSPs)
scaffold0309 (109-266)||(16668-16825)
[»] scaffold0235 (2 HSPs)
scaffold0235 (212-305)||(9682-9775)
scaffold0235 (212-305)||(19896-19989)
[»] scaffold0228 (1 HSPs)
scaffold0228 (124-317)||(20214-20407)
[»] scaffold0089 (1 HSPs)
scaffold0089 (107-260)||(14833-14986)
[»] scaffold0575 (1 HSPs)
scaffold0575 (124-320)||(3554-3750)
[»] scaffold0126 (1 HSPs)
scaffold0126 (169-305)||(42905-43041)
[»] scaffold0044 (1 HSPs)
scaffold0044 (178-338)||(16113-16273)
[»] scaffold0084 (1 HSPs)
scaffold0084 (124-339)||(7175-7390)
[»] scaffold0072 (1 HSPs)
scaffold0072 (169-320)||(53018-53169)
[»] scaffold0035 (1 HSPs)
scaffold0035 (107-254)||(42227-42374)
[»] scaffold0012 (1 HSPs)
scaffold0012 (109-320)||(217542-217753)
[»] scaffold0501 (1 HSPs)
scaffold0501 (227-337)||(4150-4260)
[»] scaffold0149 (2 HSPs)
scaffold0149 (169-266)||(5532-5629)
scaffold0149 (169-266)||(9963-10060)
[»] scaffold0079 (1 HSPs)
scaffold0079 (227-308)||(35481-35562)
[»] scaffold0034 (1 HSPs)
scaffold0034 (220-305)||(3186-3271)
[»] scaffold0020 (1 HSPs)
scaffold0020 (107-320)||(99682-99895)
[»] scaffold0676 (1 HSPs)
scaffold0676 (212-308)||(7999-8095)
[»] scaffold0333 (1 HSPs)
scaffold0333 (227-339)||(17608-17720)
[»] scaffold0256 (1 HSPs)
scaffold0256 (227-339)||(23314-23426)
[»] scaffold0243 (1 HSPs)
scaffold0243 (124-320)||(25082-25278)
[»] scaffold0239 (1 HSPs)
scaffold0239 (175-339)||(10974-11138)
[»] scaffold0222 (1 HSPs)
scaffold0222 (240-320)||(9034-9114)
[»] scaffold0215 (1 HSPs)
scaffold0215 (227-339)||(28811-28923)
[»] scaffold0130 (1 HSPs)
scaffold0130 (227-339)||(44883-44995)
[»] scaffold0056 (1 HSPs)
scaffold0056 (227-339)||(3593-3705)


Alignment Details
Target: scaffold0302 (Bit Score: 294; Significance: 1e-165; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 7435 - 7070
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 7236  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  7235 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 7136  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||| ||||||||| ||||||||||| |  ||||||||||||||||||||    
T  7135 aagtgagtttccttggtcatttgatttctaagggtggtatttatgtggatccttctaaggttgatg 7070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 493 - 128
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  493 atcaccagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 394  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  393 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 294  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  293 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttttctaagtgtgagttttggttgaagg 194  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||| ||||||||| ||||||||||| |  ||||||||||||||||||||    
T  193 aagtgagtttccttggtcatttgatttctaagggtggtatttatgtggatccttctaaggttgatg 128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 25676 - 25311
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 25477  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  25476 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 25377  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  25376 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 25311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 282; Significance: 1e-158; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 15190 - 14825
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 14991  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  14990 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 14891  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  14890 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 14825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 11198 - 11563
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||||| |||||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 11397  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | |||| ||||||||||||||||||    
T  11398 tctgaggaagagcataatgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttatataagtgtgagttttggttgaagg 11497  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| |||||| |||||||||| |||||||||||||  ||||||||| ||||||||||    
T  11498 aagtgagtttccttggtcaagtgatttctaagggtggtatttctgtggatccttcaaaggttgatg 11563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 16875559 - 16875924
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16875758  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  16875759 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 16875858  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  16875859 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 16875924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 21848801 - 21849166
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| |||||| |||||||||||||||| | |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 21849000  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| | ||||||||||||||||    
T  21849001 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgggagttttggttgaagg 21849100  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||| | ||||||||||||||||| |||||||||||||  ||||||||| ||||| ||||    
T  21849101 aagtgagttttcttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggtggatg 21849166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 20650819 - 20651184
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||| |||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||| || || || ||||||||||||||| |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||     
T  20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgttttgtagtggtgttcatagatgatattttggtgtattcgaaa 20651018  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  20651019 tctgaggaggagcatgccgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagatttggttgaagg 20651118  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  |||||| ||||| |||||||    
T  20651119 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccgtctaaagttgatg 20651184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 22436620 - 22436255
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||| ||||||||||| |||||||||||||||||||||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||||||| ||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 22436421  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||| ||||| |||||||||||||||| ||||||| |||||| || ||||| || ||||||||||||||||||||| ||||||||||||||  ||    
T  22436420 tctgaggagaagcatgctgagcatttgaggatagtgttgcgagtcttaaaggagaatcagttatgtgctaagttgtctaagtgtgagttttggttgtggg 22436321  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| ||||||||||||   |||||| || ||||||||||    
T  22436320 aagtgagtttccttggtcatgtgatttctaagggtggtatttccgtggatccgtcgaaggttgatg 22436255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 23155506 - 23155869
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||||||||| ||||||||||||||| | | ||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaa 23155603  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||     
T  23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttattgatgatattttagtgtattcgaag 23155703  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||| |||  |||||||||||||||||||||| |||||||||| || || || ||||||||||||||||||||| ||||||||||||||||||    
T  23155704 tctgaggaggatcatgttgagcatttgaggattgtgttgtaagtcttgaaggataatcagttatgtgctaagttgtctaagtgtgagttttggttgaagg 23155803  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| | ||||||||||||||| || ||||||||||  |||||| || ||||||||||    
T  23155804 aagtgagtttccttagtcatgtgatttctaaggatggtatttctgcggatccgtcgaaggttgatg 23155869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 11 - 352
Target Start/End: Original strand, 21195004 - 21195344
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| | |||||| ||||||||||| |||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    || |||||||  ||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||     
T  21195104 tgtgccaggta-cttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtatttatagatgctattttggtgtattcgaaa 21195202  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||    
T  21195203 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtattgaaggagaaccagttatgtgctaagttgtctaagagtgagttttggttgcagg 21195302  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtattt 352  Q
    |||| ||||||| ||||||||||||||||  |||||||||||    
T  21195303 aagtaagtttccttggtcatgtgatttctcagggtggtattt 21195344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 28 - 351
Target Start/End: Complemental strand, 23902464 - 23902141
Alignment:
Q  28 aaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtcttta 127  Q
    |||| |||||||||||||||||||| ||||  ||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||| |    
T  23902464 aaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttca 23902365  T
Q  128 tggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattc 227  Q
    ||||||| |||||||||||||||||||||| | ||||||||||| |||| |||||||| ||||||||||||||||||||||| | ||||||||||||| |    
T  23902364 tggaatatatgaatagaatatttcatccttttctggaccgttttatggtagtgtttatcgatgatattttggtgtattcgaagtttgaggaggagcatgc 23902265  T
Q  228 tgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggt 327  Q
    |||||||||||||||| ||||||  |||||||| || ||  | || |||||||||| ||| ||| | ||| ||||||||   ||||||||||||| ||||    
T  23902264 tgagcatttgaggattatgttgcgtgtcttgaaggaaaattagttgtgtgctaagtggtcgaagtgcgagctttggttgcgagaagtgagtttccttggt 23902165  T
Q  328 catgtgatttctacgggtggtatt 351  Q
    ||||||||||||| ||||||||||    
T  23902164 catgtgatttctaagggtggtatt 23902141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 306
Target Start/End: Original strand, 24631171 - 24631425
Alignment:
Q  52 gtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttc 151  Q
    ||||||||||| |||||| | ||||||||||||||| | ||| ||||||| ||  |||||| || |||  | |||||||||||||||||||  ||||| |    
T  24631171 gtgttctgaactaggtatagtcactatgagtattctgtaatgtcatttggtgtgactaatgtgctaggattatttatggaatacatgaatatgatattcc 24631270  T
Q  152 atccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgca 251  Q
    ||  ||||| ||| |  | |||||| ||||| ||||| ||||| ||||||| |||||| || |||||||||||| | |||||| ||| ||| |||| |||    
T  24631271 attattattgggatcagtgtgtggttgtgttcatagacgatatcttggtgtcttcgaagtcggaggaggagcatgcagagcatctgatgatcgtgtcgca 24631370  T
Q  252 agtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
       |||||| |||||  |||| | ||| | ||||| |||| ||||||||||||||    
T  24631371 gaccttgaaggagaagaaattgtatgccatgttgtttaagtgtgagttttggttg 24631425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 16414385 - 16414302
Alignment:
Q  34 gaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgcca 117  Q
    |||||||||||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  16414385 gaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaatgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 22422454 - 22422684
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || || || |||||||||||| | || || |    
T  22422454 aatgcgccaggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactcca 22422553  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    | || || || || |||  ||| ||||||| |||||| |||||||| |||||||||||  || | | |||||| || || ||| |||| || ||||||||    
T  22422554 agtccgaagaagaacatgttgaacatttgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaattatggttgaa 22422653  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || |||||||||| ||| ||||| ||||||    
T  22422654 agaggtgagtttccttggccatgttatttct 22422684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 339
Target Start/End: Complemental strand, 22988945 - 22988719
Alignment:
Q  113 cgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattc 212  Q
    ||||| |||| ||||||||||||||||||   || |||||| | | |||||| ||||| ||||| ||||| || |||||||||||| | ||||| ||  |    
T  22988945 cgccacgtgtgtttatggaatacatgaatcacatttttcatgcatttttggatcgtttcgtggttgtgttcatcgatgatattttgatatattccaagac 22988846  T
Q  213 tgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaa 312  Q
    ||| || || ||| |||||||||||| |||||| ||||||||  ||||||||||  |  | | |||||| ||||| ||| |||| || |||||||| ||     
T  22988845 tgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagag 22988746  T
Q  313 gtgagtttccatggtcatgtgatttct 339  Q
    |||||||| | ||| ||||| ||||||    
T  22988745 gtgagttttcttggccatgttatttct 22988719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 22131672 - 22131833
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||||||| |||||| |||||||| |||||||||||  || | | ||    
T  22131672 gtgtttatcgatgatattttgatctactccaagactgaagaagaacatgctgagcatttgaagattgtcttgcaagtgttgaaagagaagaaactttatg 22131771  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    |||| ||||||||| |||| || |||||||||||||| ||||| | ||| ||||| ||||||    
T  22131772 ctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttggccatgttatttct 22131833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 308
Target Start/End: Original strand, 20394695 - 20394894
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||| || ||||| |||||||||||||||||| | || |||||| ||||||| || || ||||| || ||||| || || ||||||||| | || || |    
T  20394695 aatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttagatcgctttgttgttgtgttcattgacgatattttgatatactcta 20394794  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    | ||||| || || ||| | |||||||||| |||||| ||||||||  ||||||||||  | |||| ||| |||||||| ||| |||| || ||||||||    
T  20394795 agtctgaagaagaacatgccgagcatttgaagattgttttgcaagtgctgaaagagaaaaagttatatgccaagttgtcaaagtgtgaattctggttgaa 20394894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 23652260 - 23652030
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||| || ||||| |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || || || ||||||| |||| | || || |    
T  23652260 aatgcacctggtgtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgttttcattgatgatactttgatttactcca 23652161  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  |||| ||||| ||| |||||||||||| |||||| || ||||| |||||||||||  |  ||| |||||| ||||||||| |||| |||||||||||    
T  23652160 agactgaagaggaacatgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctatatgctaaattgtctaagtgtgaattttggttgaa 23652061  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || || ||||| | ||| ||||| ||||||    
T  23652060 agaggtaagttttcttggccatgtcatttct 23652030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 17672635 - 17672796
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  17672635 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 17672734  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  17672735 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 17672796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 339
Target Start/End: Complemental strand, 18858746 - 18858566
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || || |||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  18858746 tttggatcggtttgtggttgtgtttatcgacgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 18858647  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||| | ||| ||||| ||||||    
T  18858646 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 18858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 287
Target Start/End: Original strand, 22376015 - 22376193
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||| |||||||| |||||||| ||||||||| | || |||||| | | |||||| ||||||||||| ||||| || || ||||||||  | || || |    
T  22376015 aatgcaccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgttttgtggttgtgttcatcgacgatatttttatatactcca 22376114  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtc 287  Q
    |  |||| || || ||| |||||||||||| |||||| ||||||||  ||||||||||  | |||| |||||| |||||    
T  22376115 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaaattgtc 22376193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 20016875 - 20017036
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  20016875 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 20016974  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  20016975 aaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 20017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 351
Target Start/End: Complemental strand, 22317238 - 22317158
Alignment:
Q  271 ttatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatt 351  Q
    ||||||||||||||||| ||| ||||||||||||||  | ||||  |||||| |||| |||||||||||| ||||||||||    
T  22317238 ttatgtgctaagttgtcgaagtgtgagttttggttgcggaaagttggtttccttggtaatgtgatttctaagggtggtatt 22317158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 15535484 - 15535372
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||| ||||| | |||    
T  15535484 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttgg 15535385  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  15535384 ccatgttatttct 15535372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 30311824 - 30311936
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||| ||||| | |||    
T  30311824 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttgg 30311923  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  30311924 ccatgttatttct 30311936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 31569402 - 31569634
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||||||| || | |||||    
T  31569402 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 31569501  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    |||  |||| || |||||| | || ||| |||| |||||| ||||||| |||||||||||  | || | ||| || ||||| ||  ||||||||||| |     
T  31569502 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 31569601  T
Q  307 aaggaagtgagtttccatggtcatgtgatttct 339  Q
    |  ||||||||||||| ||||||| | ||||||    
T  31569602 agtgaagtgagtttccttggtcatattatttct 31569634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 23887289 - 23887158
Alignment:
Q  67 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 166  Q
    |||||||| || ||||||||  ||||||| || || ||  |||||||||||| ||| |||||||| |||||||||   || |||||| ||||||| || |    
T  23887289 tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaatcatatttttcatgcttatttagatc 23887190  T
Q  167 gttttgtggtggtgtttatagatgatattttg 198  Q
    | || ||||| ||||| || ||||||||||||    
T  23887189 gcttcgtggttgtgttcatcgatgatattttg 23887158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 19482757 - 19482855
Alignment:
Q  240 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||| | ||||||||| |||||    
T  19482757 gattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggtcatgttatttc 19482855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 19980186 - 19979956
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| || || |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| || ||||||||| | || || |    
T  19980186 aatgcgcctggagtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgacgatattttgatttactcca 19980087  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  |||| || || ||| ||||| || ||| |||||| |||||||| |||||||||||  |||| | |||||| || ||||||  ||| || ||||||||    
T  19980086 agactgaagaagaacatgctgagaatctgaagattgtcttgcaagtgttgaaagagaagaaattttatgctaaattatctaagtatgatttctggttgaa 19979987  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || || ||||| | ||| ||||| ||||||    
T  19979986 agaggtaagttttcttggccatgttatttct 19979956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 19114791 - 19114698
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  19114791 ctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 19114698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 260
Target Start/End: Complemental strand, 20390292 - 20390167
Alignment:
Q  135 catgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcat 234  Q
    |||||||||||| || ||| |||  ||||| || |||||||| |||||||| ||||| || ||| | ||||| ||  |||| || |||||| | ||||||    
T  20390292 catgaatagaattttccatgctttcttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagactgaagaagagcatgcggagcat 20390193  T
Q  235 ttgaggattgtgttgcaagtcttgaa 260  Q
    || | ||||||||||||||| |||||    
T  20390192 ttaaagattgtgttgcaagtgttgaa 20390167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 19869954 - 19869818
Alignment:
Q  67 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 166  Q
    ||||| || |||||||||||  ||||||| |||||||| || || |||||||| || |||||||| || ||||| ||||| || ||||| ||||| || |    
T  19869954 tatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaacagaattttccatccgtatttagatc 19869855  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgta 203  Q
      || || || || || || |||||||||||||||||    
T  19869854 agttcgttgtagtattcattgatgatattttggtgta 19869818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 21920428 - 21920540
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| |||||||| || | |||    
T  21920428 ctgagcatttgaagttagttttgcaagtgttgaaagagaagaaactttatgcgaaattgtctaagtgtgagttctggttgaaagaagtgagctttcttgg 21920527  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  21920528 acatgttatttct 21920540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 320
Target Start/End: Complemental strand, 32602295 - 32602152
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  32602295 gtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 32602196  T
Q  278 ctaagttgtctaagcgtgagtt-ttggttgaaggaagtgagttt 320  Q
    |||| ||||| ||| |||| || ||||||||| ||||| |||||    
T  32602195 ctaaattgtcaaagtgtgaattcttggttgaaagaagtaagttt 32602152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 320
Target Start/End: Original strand, 21323904 - 21324051
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaat 271  Q
    ||||| |||||||| ||||| ||| || | ||||| ||  |||| || |||||| | || ||| ||| ||||||||||||| | |||||||||||  | |    
T  21323904 gtggttgtgtttatcgatgacattctgatctattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaattttgaaagagaa-aagt 21324002  T
Q  272 tatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    | | |||||||||||| ||| ||||||| ||||| |  |||||||||||    
T  21324003 tgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 21324051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 339
Target Start/End: Complemental strand, 22041996 - 22041816
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || || ||||| |||||||| || ||||||||| |||| || ||  |||| || || ||| |||||||| ||| |||||| |||||||  |||    
T  22041996 tttggatcggttcgtggttgtgtttatcgacgatattttgatgtactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagcgttg 22041897  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    ||||||||  || | | |||||| || |||||| | || || |||||||| ||| | ||||| | ||| ||||| ||||||    
T  22041896 aaagagaagaaactttatgctaaattatctaagtgagaattctggttgaaagaaataagttttcttggccatgttatttct 22041816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 7826140 - 7825775
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 7825941  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  7825940 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 7825841  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  7825840 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 7825775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 27105804 - 27106169
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 27106003  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  27106004 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 27106103  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  27106104 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 27106169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 27172521 - 27172156
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 27172322  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  27172321 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 27172222  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  27172221 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 27172156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 4442168 - 4441826
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |  ||||||||| |||||| ||||||||| |||||||||| |||||||| ||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||| |||||||| ||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||     
T  4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 4441969  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||| ||||||||||   |||||||||||||| ||||||| ||||||||| || || |  ||||||||||||||||| ||| ||||||||||||||  ||    
T  4441968 tctggggaggagcatgtcgagcatttgaggatggtgttgcgagtcttgaaggaaaatcggttatgtgctaagttgtcgaagtgtgagttttggttgcggg 4441869  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttc 353  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  4441868 aagtgagtttccttggtcatgtgatttctaagggtggtatttc 4441826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 13458275 - 13457935
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||||| | ||||| ||||||||||||| ||    
T  13458275 atcattagattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaa 13458176  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||| |||||||| |||||||||| ||| ||||||| |  ||| |||||||||||||||||||| ||||||||||||||||||||||      
T  13458175 tgcgccaggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtggtggtgtttatcgatgatattttggtgtattcgagg 13458076  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    || ||||||||| || ||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||||||||| ||||||||||||||  ||    
T  13458075 tcagaggaggagtatgctgagcatttgaggattgtgttgcgtgtcttgaaagagaatcatttatgtgctaagttgtctaagtgtgagttttggttgcggg 13457976  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatt 351  Q
    |||||||||||| || |||||||||||| | || |||||||    
T  13457975 aagtgagtttccttgatcatgtgatttcgaaggatggtatt 13457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 17925890 - 17925550
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||  ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||||||| ||||| ||     
T  17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtggtggtgtttatagattatattttggtatattcaaag 17925691  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||  ||||||||||  || |||||| || ||||||||||  |||||||| ||||| || ||||||||||||||||||||| |||| |||||||||   |    
T  17925690 tctagggaggagcatgttgtgcatttaagaattgtgttgcgcgtcttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttggttgcgtg 17925591  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatt 351  Q
    |||||||||||| ||||||||||||||| | ||||||||||    
T  17925590 aagtgagtttccttggtcatgtgatttcgaagggtggtatt 17925550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 13379123 - 13378969
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||||||||| ||||||||||||||||||| ||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa 13379026  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccg 167  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||    
T  13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 24 - 351
Target Start/End: Original strand, 15716946 - 15717273
Alignment:
Q  24 agtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtc 123  Q
    |||||||||||| |||||||||||||| | |||| |||| || ||||| |||||||| |||||| | |||||||||||  || |||||| |||  |||||    
T  15716946 agtgaaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtc 15717045  T
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    || |||||||| |||||||||||||| ||||||| | ||||||  ||| |||| ||||||||||| ||||| ||||| ||||| |  || ||||||||||    
T  15717046 ttcatggaatatatgaatagaatattccatccttttctggaccagtttttggtagtgtttatagacgatatcttggtttattcaatgtcggaggaggagc 15717145  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || |||| ||||| ||||  ||||||||   |||||| |||||  | || | |||||| ||||| ||| |||||||||| ||| ||||||||||||| |     
T  15717146 atgctgaacattttaggaccgtgttgcagaccttgaaggagaagaagttgtttgctaatttgtcgaagtgtgagttttgattgcaggaagtgagttttct 15717245  T
Q  324 tggtcatgtgatttctacgggtggtatt 351  Q
    ||||||||||||||| | ||| ||||||    
T  15717246 tggtcatgtgatttcaaagggcggtatt 15717273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 58 - 333
Target Start/End: Original strand, 17143353 - 17143628
Alignment:
Q  58 tgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctt 157  Q
    ||||||||||||||||||||||| ||||||  |||| ||||||| ||  ||||| |||| |||||||| |||||||| ||||||||||| || |||||||    
T  17143353 tgaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctt 17143452  T
Q  158 atttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtctt 257  Q
    ||||||| |  |||||||||||||||||||| ||||| |||||||||||||| || |||||||| ||| | |||||| |||||||||||||||     ||    
T  17143453 atttggatcagtttgtggtggtgtttatagacgatatcttggtgtattcgaagtcagaggaggatcatgcggagcatatgaggattgtgttgcgtacgtt 17143552  T
Q  258 gaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtg 333  Q
    ||| |||||  | || | || ||||||||| ||| ||||||||||||||   |||| |||||||| ||||||||||    
T  17143553 gaaggagaagaagttgtttgataagttgtcgaagtgtgagttttggttgcgtgaagggagtttccttggtcatgtg 17143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 14938341 - 14938245
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtattt 352  Q
    |||||||| || || || |||||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||||||  ||||||||||    
T  14938341 ttgaaagacaatcagttgtgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttggtcatgtgatttctaaaggtggtattt 14938245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 15365934 - 15365838
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtattt 352  Q
    |||||||| || || || |||||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||||||  ||||||||||    
T  15365934 ttgaaagacaatcagttgtgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttggtcatgtgatttctaaaggtggtattt 15365838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 48813378 - 48813609
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    ||||||||||| |||| |||||||| ||||||||| | || |||||| ||||||| || || || ||||| ||||| || |||||||||||| | || ||    
T  48813378 ctaatgcgccaagtgtgtttatggagtacatgaattgtatttttcatgcttatttagatcgcttcgtggttgtgttcattgatgatattttgatatactc 48813477  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     || ||||| || || ||| |||||||||||| |||||||||||||||  |||| |||||  | |||| ||| || ||||| ||| |||| || ||||||    
T  48813478 taagtctgaagaagaacatgctgagcatttgaagattgtgttgcaagtgctgaaggagaagaagttatatgccaa-ttgtcaaagtgtgaattctggttg 48813576  T
Q  307 aaggaagtgagtttccatggtcatgtgatttct 339  Q
    || || |||||||| | ||| ||||| ||||||    
T  48813577 aatgaggtgagttttcttggccatgttatttct 48813609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 339
Target Start/End: Original strand, 11770430 - 11770599
Alignment:
Q  170 ttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacca 269  Q
    ||||||| ||||| || |||||||||||| | || || || |||||||  || ||| |||||||||||| |||||| |||||||| |||||||||||  |    
T  11770430 ttgtggttgtgttcatcgatgatattttgatatactccaagtctgagggagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaa 11770529  T
Q  270 attatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
     |||| || ||| ||||||||| |||| || |||||||| || || ||||| | ||| ||||| ||||||    
T  11770530 gttatatgttaaattgtctaagtgtgaattctggttgaaagaggtaagttttcttggccatgttatttct 11770599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 11235391 - 11235552
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  11235391 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 11235490  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  11235491 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 11235552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 11386533 - 11386746
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||||||||| |||||||| || | ||| ||||| |||||| ||| | ||||  | || |||||||||||||| |||||||||||  | |||||    
T  11386533 ctaatgcgccaggtgtatttatggagtataagaacagaatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 11386632  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     ||  |||| || |||||| | |||||| |||||||||| || || ||  ||||||||||  | || | |||||||||||| ||  |||| || |||||     
T  11386633 taagactgaagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggtta 11386732  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  11386733 agtgaagtgagttt 11386746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 14334488 - 14334327
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  14334488 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 14334389  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  14334388 aaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 14334327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 15159235 - 15159396
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  15159235 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttg 15159334  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  15159335 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 15159396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 12689526 - 12689414
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | |||    
T  12689526 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttgg 12689427  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  12689426 ccatgttatttct 12689414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 15626669 - 15626437
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    ||||||| |||||||| |||||||| ||||||||  | || |||||| ||||||| || || || ||||| | ||| || |||||||||||  | || |     
T  15626669 ctaatgcaccaggtgtatttatggagtacatgaaccgtatttttcatgcttatttagatcgcttcgtggttgcgttcatcgatgatattttaatatacta 15626570  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     || ||||| || || |||   ||| |||||| |||||| ||||||||  ||||||||||  | |||| |||||||||||| ||| |||| || ||||||    
T  15626569 taagtctgaagaagaacatgtcgagtatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttg 15626470  T
Q  307 aaggaagtgagtttccatggtcatgtgatttct 339  Q
    || || |||||||||| ||| ||| | ||||||    
T  15626469 aatgaggtgagtttccttggccatattatttct 15626437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 251
Target Start/End: Original strand, 15122170 - 15122297
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||||||||||||||| || |||| || |||||||||    |||||||| ||||| ||| | ||||| ||||||||||| || |  ||||||||||    
T  15122170 tttatggaatacatgaataggatttttcgtctttatttggattagtttgtggtcgtgttcatataagatatcttggtgtattcaaagttggaggaggagc 15122269  T
Q  224 attctgagcatttgaggattgtgttgca 251  Q
     | | |||||| |||| |||||||||||    
T  15122270 ttgcggagcatatgagaattgtgttgca 15122297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 16948638 - 16948789
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| |||||||| ||||||||| || | ||||| ||    || ||||||||  | |||||| ||| |||||||||||||||||||||||| ||      
T  16948638 tttgtggttgtgtttattgatgatattctgatttattctaaaatcgaagaggagcacgcagagcatctgaagattgtgttgcaagtcttgaaagaaaaga 16948737  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    | || | ||||||| |||| ||| ||||||||||||| |  |||||||||||    
T  16948738 agttgtatgctaagctgtcaaagtgtgagttttggttaagtgaagtgagttt 16948789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 337
Target Start/End: Original strand, 15596 - 15706
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||||||||| ||||| | |||    
T  15596 ctgagcatctgatgattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttgg 15695  T
Q  327 tcatgtgattt 337  Q
     ||||| ||||    
T  15696 ccatgttattt 15706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 8709697 - 8709536
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || ||| |||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  8709697 tttggatcggtttatggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 8709598  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  8709597 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 8709536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 11551299 - 11551460
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    ||||| || |||||||||||| | ||||| ||  |||| || || |||  ||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  11551299 gtgttcatcgatgatattttgatttattccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 11551398  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    | || ||||||||| |||| || |||||||| ||||||||||| | ||| ||||| ||||||    
T  11551399 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 11551460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 320
Target Start/End: Complemental strand, 19614820 - 19614607
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  19614820 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 19614721  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    ||   ||||||| |||||| | || ||| |||||||||| |||||||| |||||||||||  | || | ||| || ||||| ||| | |||||||||||     
T  19614720 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 19614621  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  19614620 agtgaagtgagttt 19614607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 26092902 - 26093055
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  26092902 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 26093001  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  26093002 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 26093055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 39178 - 39386
Alignment:
Q  13 catcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatg 112  Q
    ||||||||  |||||||| ||||||||||||  || || |  ||| ||||  | ||||| || |||||||||||  ||||||| |||||||| || || |    
T  39178 catcagatacgagtgaagtcggaagatatattgaagactgccttcagaacccgttatggtcattatgagtattcggtgatgccttttggagtgtccaacg 39277  T
Q  113 cgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattc 212  Q
    ||||||| || |||||||| || ||||| ||||| || ||||| ||||| || |  || || || || || || ||||||||||||||||| || || ||    
T  39278 cgccaggagtttttatggagtatatgaacagaattttccatccatatttagatcagttcgttgtagtattcattgatgatattttggtgtactctaaatc 39377  T
Q  213 tgaggagga 221  Q
     ||||||||    
T  39378 agaggagga 39386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 263
Target Start/End: Original strand, 12204904 - 12205060
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||| ||||    | |||||| |||||||| |||||||| ||  | ||||     
T  12204904 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatctgtggtcgtgtttattgatgatatcttaatttattt 12205003  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
     ||  |||| || |||||| | |||||| |||  |||||||||||||| ||||||||    
T  12205004 taagactgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaaga 12205060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 14956578 - 14956466
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| ||||||||||| | |||    
T  14956578 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttgg 14956479  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  14956478 ccatgttatttct 14956466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 15147131 - 15147243
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||||||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| || || ||||| | |||    
T  15147131 ctgagcatttgaagattgttttgcaagtgttgaaagagaagaaactttatgcaaaattgtctaagtgtgagttctggttgaaagaggtaagttttcttgg 15147230  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  15147231 ccatgttatttct 15147243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 263
Target Start/End: Complemental strand, 19149356 - 19149200
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||| |||| || ||| ||||| ||||    |||||||| |||||||| ||||| || ||  | |||||    
T  19149356 ctaatgcgcctggtgtgtttatggagtatatgaattgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 19149257  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
     ||  |||| || |||||| | |||||| ||| ||||||||||||||| ||||||||    
T  19149256 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaga 19149200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 263
Target Start/End: Complemental strand, 20748755 - 20748599
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||| ||||    |||||||| |||||||| ||||| || ||  | |||||    
T  20748755 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 20748656  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
     ||  |||| || |||||| | |||||| ||| ||||||||||||||| ||||||||    
T  20748655 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaga 20748599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 10872772 - 10872621
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||      
T  10872772 tttgtggtcgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 10872673  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    || | | | |||| ||||||||| |||| || |||||||| |||||||||||    
T  10872672 aactttatcctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10872621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 13023440 - 13023289
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||||||||||| ||||||| |||| | ||||| ||  |||| ||||||||| | || ||| |||| ||||| |||||||| |||||||| ||      
T  13023440 tttgtggtggtgtttattgatgataatttgatttattctaagactgaagaggagcatgcagaacatctgagaattgtattgcaagttttgaaagaaaaga 13023341  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    | || | ||| |||||||| ||  ||||||| ||||| |  |||||||||||    
T  13023340 agttgtatgccaagttgtcaaaatgtgagttgtggttaagtgaagtgagttt 13023289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 44789529 - 44789708
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || ||||||||  ||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||    
T  44789529 tttggatcggtttgtggttatgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 44789628  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| || |||||||||| ||| ||||| |||||    
T  44789629 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 44789708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 26116694 - 26116847
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| |||||||| ||||||||| |||| || ||| ||| | ||||    ||| | ||||||||||| || ||||||||  | |||||    
T  26116694 ctaacgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttcttgtggtgtttattgacgatattttaatctattc 26116793  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| |||||||||||||| |||||    
T  26116794 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaa 26116847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 49154446 - 49154293
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||  ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  49154446 ctaatgcgcctggtgtttttatggggtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 49154347  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  49154346 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 49154293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 263
Target Start/End: Complemental strand, 14139824 - 14139668
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| |||||||||||| | |||||    
T  14139824 ctaacgcgcctggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattttgatttattc 14139725  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
     ||  |||| || |||||| | || ||| |||| |||||||||||||| ||||||||    
T  14139724 taagactgaagaagagcatgcagaacatctgagaattgtgttgcaagtattgaaaga 14139668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 263
Target Start/End: Original strand, 23503974 - 23504130
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||||||| || | |||||    
T  23503974 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 23504073  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
    |||  |||| || |||||| | || ||| |||| |||||||||||||| ||||||||    
T  23504074 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 23504130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 13688133 - 13688026
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  13688133 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttg 13688034  T
Q  259 aaagagaa 266  Q
    ||||||||    
T  13688033 aaagagaa 13688026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 266
Target Start/End: Original strand, 13966772 - 13966931
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||| ||  | |||||    
T  13966772 ctaacgcgcctggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 13966871  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
     ||   ||| ||||||||| | |||||| |||| ||||| |||||||| |||||||||||    
T  13966872 caagaatgaagaggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaa 13966931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 319
Target Start/End: Complemental strand, 13675535 - 13675385
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || ||||| ||||| ||| || | ||||| ||  |||| || |||||| | |||||| ||| |||||| |||||||| ||||| |||||      
T  13675535 tttgtggttgtatttattgatgacattctgatttattcaaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtattgaatgagaaaa 13675436  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtt 319  Q
    | || | |||||||||||| ||| ||||||| ||||| |  ||||||||||    
T  13675435 agttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagtt 13675385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 14262349 - 14262433
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatga 191  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||| ||||    |||||||| |||||||| |||||    
T  14262349 ctaatgcgcctggtgtgtttatggagtatatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatga 14262433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 263
Target Start/End: Original strand, 18052057 - 18052213
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||| ||| || | |||||    
T  18052057 ctaacgcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 18052156  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
    |||  |||| || |||||| | || ||| |||| |||||||||||||| ||||||||    
T  18052157 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 18052213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 16380539 - 16380904
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16380738  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  16380739 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 16380838  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  16380839 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 16380904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 1646980 - 1647345
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||     
T  1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgacattttggtgtattcgaag 1647179  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    | |||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||  || ||||| |||||||||||| ||||||||||||||||||    
T  1647180 tttgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagataaccggttgtgtgccaagttgtctaagtgtgagttttggttgaagg 1647279  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  1647280 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 1647345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 16648135 - 16648500
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16648334  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || || || |||||||||||| ||||||||||||||||||    
T  16648335 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 16648434  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||| ||||| ||||||||||    
T  16648435 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggacccttccaaggttgatg 16648500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 23998363 - 23997998
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||     
T  23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattgaaag 23998164  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    || ||||| |||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||||||||||||| |||    
T  23998163 tccgaggaagagcatgctgaacatttgaggattgtgttgtaagtcttgaaagagaaccagttatgtgccaagttgtctaagtgtgagttttggttggagg 23998064  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||   |||||||| ||||||||||    
T  23998063 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtagatccttccaaggttgatg 23997998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 14130584 - 14130219
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||| | ||||| |||||||| |||| ||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    || || ||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtggtggtgtttagagatgatattttggtgtattcgaag 14130385  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    | ||||||||||||| |||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||   |    
T  14130384 tttgaggaggagcatgctgagcatttgaggattgtgttacgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgtgag 14130285  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| |||||||||||||||||  ||||||||||||  |||||| |  ||||||||||    
T  14130284 aagtgagtttccttggtcatgtgatttctaaaggtggtatttctgtggatccgttgaaggttgatg 14130219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 16100130 - 16099759
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||| |||||||||||||||||||||||||||   |||  ||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
Q  111 tgcgccaggtgtctttat------ggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtat 204  Q
    || |||||||||||||||      ||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtggtggtgtttatagatgataatttggtgtat 16099931  T
Q  205 tcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggt 304  Q
    ||||| ||| ||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  16099930 tcgaagtctaaggaggagcacgctgagcatttaaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggt 16099831  T
Q  305 tgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    || ||||||||| ||||| ||||||||||||||||| ||||||||||| |  ||||||||| ||||||||||    
T  16099830 tgcaggaagtgaatttccttggtcatgtgatttctaagggtggtatttatgtggatccttcgaaggttgatg 16099759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 377
Target Start/End: Original strand, 23025912 - 23026257
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||   ||   ||||||||||||||||||||||||||||| |||||||||||||||||| |      
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatat-- 23026009  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
                       ||||| |||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||| |||     
T  23026010 -------------------gaatatatgaatagaatatttcatccttttatgaaccgttttgtggtggtgtttatagatgatattttggtgtatttgaag 23026090  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| ||  |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||  ||    
T  23026091 tctgaggaggagcatgcttcgcatttgaggattgtgttgcgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcggg 23026190  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatgt 377  Q
    |||||||||||| ||||||||||||||||| ||||||||||||   |||||| || |||||||||||    
T  23026191 aagtgagtttccttggtcatgtgatttctaagggtggtatttccgtggatccgtcgaaggttgatgt 23026257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 194 - 376
Target Start/End: Original strand, 18836257 - 18836439
Alignment:
Q  194 ttttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcg 293  Q
    ||||||||||||| || |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| |    
T  18836257 ttttggtgtattcaaaatctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttggaagagaaccagttatgtgctaagttatctaagtg 18836356  T
Q  294 tgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    ||||||||||||||||| |||||| |||| |||||| |||||||||| |||||||||||||  |||||| |||||||||||||    
T  18836357 tgagttttggttgaagggagtgagcttccttggtcacgtgatttctaagggtggtatttctgtggatccgtctaaggttgatg 18836439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 234 - 376
Target Start/End: Complemental strand, 18578101 - 18577959
Alignment:
Q  234 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtg 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  18578101 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagtatgagttttggttgaaggaagtgagtttccttggtcatgtg 18578002  T
Q  334 atttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    ||||||| |||||||||||||   |||||||||||||||||||    
T  18578001 atttctaagggtggtatttctgcagatccttctaaggttgatg 18577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 234 - 376
Target Start/End: Original strand, 19985805 - 19985947
Alignment:
Q  234 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtg 333  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||||||||    
T  19985805 tttgaggattgtgttgcaggtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagcgagttttcttggtcatgtg 19985904  T
Q  334 atttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    ||||||| |||||||||||||  ||||||||||||||||||||    
T  19985905 atttctaagggtggtatttctgtggatccttctaaggttgatg 19985947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 256 - 376
Target Start/End: Complemental strand, 16234898 - 16234778
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 355  Q
    ||||| ||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||||||  |||||||||||||||| |||||||||||||     
T  16234898 ttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttggttgaaggaagggagtttcctgggtcatgtgatttctaagggtggtatttctg 16234799  T
Q  356 gggatccttctaaggttgatg 376  Q
     ||||||| ||||||||||||    
T  16234798 tggatcctcctaaggttgatg 16234778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 21929074 - 21928979
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatt 351  Q
    ||||| ||||| || || |||||||||||||| ||| ||||||||||||||  ||||| |||||||| ||||||||||||||||| ||||||||||    
T  21929074 ttgaaggagaatcagttgtgtgctaagttgtcaaagtgtgagttttggttgcgggaagggagtttccttggtcatgtgatttctaagggtggtatt 21928979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 339
Target Start/End: Original strand, 18965599 - 18965789
Alignment:
Q  149 ttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgtt 248  Q
    ||||| ||||||| || || ||||| ||  |||| || |||||||||||| | ||| | || ||||| || || |||||||||||||||| |||||| ||    
T  18965599 ttcatgcttatttagatcgctttgttgttttgttcattgatgatattttgatatatgctaagtctgaagaagaacattctgagcatttgaagattgtttt 18965698  T
Q  249 gcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
     |||||  ||||||||||  | |||| |||||||||||| ||| |||| || |||||||| || |||||||||| ||| ||| | ||||||    
T  18965699 tcaagtgatgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggtgagtttccttggccatattatttct 18965789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 2873117 - 2873296
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || ||||||||  ||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  2873117 tttggatcggtttgtggttatgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 2873216  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    || |||||  |  | | |||||| ||||||||| |||| ||||||||||| ||||||||||||| ||| ||||| |||||    
T  2873217 aaggagaagaagctttatgctaaattgtctaagtgtgaattttggttgaaagaagtgagtttccttggccatgttatttc 2873296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 124 - 339
Target Start/End: Original strand, 18406223 - 18406438
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||||||||| || || || |||||||||||| | || || ||  |||| || || |    
T  18406223 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccaagactgaagaagaac 18406322  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || ||||||||||||   | || |||||||| |||||||||||  || ||| |||||| |||| |||| |||| || |||||||| |||||||| || |     
T  18406323 atgctgagcatttgaaactggttttgcaagtgttgaaagagaagaaactatatgctaaattgtttaagtgtgaattctggttgaaagaagtgagctttct 18406422  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  18406423 tggacatgttatttct 18406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 254
Target Start/End: Original strand, 23085993 - 23086180
Alignment:
Q  67 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 166  Q
    |||||||| ||||| |||||  ||||||| || || ||  | |||||||| ||||| |||||||| ||||||||| | || |||||| | |||||||| |    
T  23085993 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatc 23086092  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagt 254  Q
    | || ||||| ||||| || |||||||||||| | || || || | ||| || || ||| |||||||||||| |||||| ||||||||    
T  23086093 gcttcgtggttgtgttcatcgatgatattttgatatactctaagtatgaagaagaacatgctgagcatttgaagattgttttgcaagt 23086180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 178
Target Start/End: Original strand, 14643664 - 14643817
Alignment:
Q  22 agagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtg 121  Q
    ||||||||| |||| ||||| ||||| || |  ||| |||| || ||||||||||  || |||||| ||||||||||||| ||  || ||||||  ||||    
T  14643664 agagtgaagacggaggatatttccaagactgcattccgaactagatatggacact--ga-tattctgtgatgccatttggtgttactgatgcgcatggtg 14643760  T
Q  122 tctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtgg 178  Q
    |||| |||||||| ||||||||||| || |||||||||||||| |  ||||||||||    
T  14643761 tcttcatggaatatatgaatagaatcttccatccttatttggatcagtttgtggtgg 14643817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 124 - 337
Target Start/End: Complemental strand, 23080471 - 23080258
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | | | || ||||| ||||| ||||| || |||||||||||| | || || || |||||||| || |    
T  23080471 tttatggagtacatgaatcgcatttttcatgcatttctagatcgtttcgtggttgtgttcatcgatgatattttgatttactccaagtctgaggaagaac 23080372  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || |||||||||||| |||||| ||||||||  ||||||||||  || | | |||||| || || |||  ||| || |||||||| || ||||||||||     
T  23080371 atgctgagcatttgaagattgttttgcaagtgctgaaagagaagaaactttatgctaaattatcaaagtttgaattctggttgaaagaggtgagtttcct 23080272  T
Q  324 tggtcatgtgattt 337  Q
    ||| ||||| ||||    
T  23080271 tggccatgttattt 23080258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 24294096 - 24294257
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  24294096 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 24294195  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  24294196 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 24294257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 22828737 - 22828849
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | |||    
T  22828737 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttgg 22828836  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  22828837 ccatgttatttct 22828849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 266
Target Start/End: Complemental strand, 19881317 - 19881158
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||||| || |||||| ||||  ||||    |||||||| ||||| || ||||| |||||| | |||||    
T  19881317 ctaatgcgcctggtgtgttcatggagtatatgaataggatttttcatgcttacctggataaatttgtggttgtgttcattgatgacattttgatctattc 19881218  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    ||   ||||||| |||||| | || ||| |||||||||| |||||||| |||||||||||    
T  19881217 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaa 19881158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 305
Target Start/End: Original strand, 14378240 - 14378376
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || ||||| ||||||| | || | ||||| ||  |||| ||||||||| | |||||| ||| |||||| ||||||||||||||||||||      
T  14378240 tttgtggttgtatttattgatgatagtctgatttattctaagactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaa 14378339  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggtt 305  Q
    | || | ||| |||||||| ||  |||||||||||||    
T  14378340 agttgtatgccaagttgtcgaaatgtgagttttggtt 14378376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 305
Target Start/End: Original strand, 14379790 - 14379926
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || ||||| ||||||| | || | ||||| ||  |||| ||||||||| | |||||| ||| |||||| ||||||||||||||||||||      
T  14379790 tttgtggttgtatttattgatgatagtctgatttattctaagactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaa 14379889  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggtt 305  Q
    | || | ||| |||||||| ||  |||||||||||||    
T  14379890 agttgtatgccaagttgtcgaaatgtgagttttggtt 14379926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 339
Target Start/End: Original strand, 18196047 - 18196227
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| ||||||||||| ||||| ||  ||||||||||| | || || || || || || |||||| || ||||||||| |||||| ||||||||  ||    
T  18196047 tttggatcgttttgtggttgtgttcatttatgatattttgatatactccaagtccgaagaagagcatgctaagcatttgaagattgttttgcaagtgctg 18196146  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    ||||||||  |  ||| |||||| ||||| |||  ||| ||||||||||| || |||| ||| | ||| ||||| ||||||    
T  18196147 aaagagaagaagctatatgctaaattgtcaaagtatgaattttggttgaaagatgtgaattttcttggccatgttatttct 18196227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 339
Target Start/End: Complemental strand, 19866654 - 19866474
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| || ||||| |||||||||||| | || || ||  ||||  | || ||| |||||||| ||| |||||| |||||||| |||    
T  19866654 tttggatcgctttgtggttgtttttatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttg 19866555  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    ||||||||  || | | ||||||  | |||||||||||||| |||||||| || || ||||| | ||| ||||| ||||||    
T  19866554 aaagagaagaaactttatgctaaactatctaagcgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 19866474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 339
Target Start/End: Original strand, 20634219 - 20634434
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || || || ||| | || || |    
T  20634219 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttattgatgatattttgatttactccaagtctaaagaagaac 20634318  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || |||||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||||||| |||| || |||||||| |||||||| || |     
T  20634319 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 20634418  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  20634419 tggacatgttatttct 20634434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 19487582 - 19487687
Alignment:
Q  155 cttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagt 254  Q
    |||||||||| || |||||||| || ||||| ||||| || ||| | ||||| || ||||| || |||||| | |||||||| | |||||||||||||||    
T  19487582 cttatttggatcggtttgtggttgtttttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcatttaaagattgtgttgcaagt 19487681  T
Q  255 cttgaa 260  Q
     |||||    
T  19487682 gttgaa 19487687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 317
Target Start/End: Original strand, 22760734 - 22760927
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || |||||  ||||||||||| | || || || ||||| || ||||    
T  22760734 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttattaatgatattttgatttactccaagtctgaagaagagc 22760833  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgag 317  Q
    || |||||||||||| | | || ||| |||| |||||||||||  |  | | ||| || ||||||||| |||| || |||||||| ||||||||    
T  22760834 atgctgagcatttgaagctggttttgtaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgag 22760927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 338
Target Start/End: Original strand, 28261581 - 28261690
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 328  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| ||||||||||||| ||| |    
T  28261581 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggcc 28261680  T
Q  329 atgtgatttc 338  Q
    |||| |||||    
T  28261681 atgttatttc 28261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 338
Target Start/End: Complemental strand, 28284335 - 28284226
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 328  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| ||||||||||||| ||| |    
T  28284335 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggcc 28284236  T
Q  329 atgtgatttc 338  Q
    |||| |||||    
T  28284235 atgttatttc 28284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 338
Target Start/End: Original strand, 28340330 - 28340439
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 328  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| ||||||||||||| ||| |    
T  28340330 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggcc 28340429  T
Q  329 atgtgatttc 338  Q
    |||| |||||    
T  28340430 atgttatttc 28340439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 27564215 - 27564327
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| |||| || |||||||| ||||| ||||| | |||    
T  27564215 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaagtaagttttcttgg 27564314  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  27564315 ccatgttatttct 27564327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 339
Target Start/End: Original strand, 25608140 - 25608355
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || || || || ||||| |||||||||||| | || || || ||||| || ||      
T  25608140 tttatggagtacatgaattgcatctttcatgcatttttggatcgattcgtagttgtttttattgatgatattttgatttactccaagtctgaagaagaag 25608239  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || |||||||||||| |||||| || ||||| |||||||||||  |  | | |||||| ||||| ||| |||| || |||||||| || || ||||| |     
T  25608240 atgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagaggtaagttttct 25608339  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  25608340 tggccatgttatttct 25608355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 326
Target Start/End: Complemental strand, 18796576 - 18796490
Alignment:
Q  240 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    ||||||||||||||| |||||||||||  | || | ||| || ||||| ||| ||||||| ||||| || ||||||||||| |||||    
T  18796576 gattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaaatgaagtgagttttcatgg 18796490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 338
Target Start/End: Complemental strand, 27189322 - 27189224
Alignment:
Q  240 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    |||||| || ||||| |||||||||||  || | | |||||| ||||| ||| |||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  27189322 gattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtccaagtgtgaattctggttgaaagaagtgagtttccttggccatgttatttc 27189224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 27259918 - 27260016
Alignment:
Q  240 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    |||||| || ||||| |||||||||||  || | | |||||| ||||| ||| |||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  27259918 gattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtccaagtgtgaattctggttgaaagaagtgagtttccttggccatgttatttc 27260016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 376
Target Start/End: Original strand, 34643868 - 34644117
Alignment:
Q  127 atggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcatt 226  Q
    ||||| || ||||||||||| |||||| ||||| ||||    |||||||| ||||  || ||||| |||||| | |||||||   | ||||| ||||||     
T  34643868 atggagtatatgaatagaatttttcatgcttatctggataaatttgtggttgtgtacattgatgacattttgatctattcgacaacggaggaagagcatg 34643967  T
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    | || ||| | || |||||||||||||| |||||||||||  | || | ||| || ||||| ||| ||||||| ||||| |  ||||| ||||||| |||    
T  34643968 cagaacatctaagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtaagtttccttgg 34644067  T
Q  327 tcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
     ||| | ||||||    |||||||| |   ||||||||| ||||||||||    
T  34644068 ccatattatttctggaagtggtattgcagtggatccttcaaaggttgatg 34644117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 15461293 - 15461197
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagaga 265  Q
    ||||||||||||||||||||||||||| || | ||||| ||  |||| ||||| ||  | || || |||| ||||||||||||  | ||||||||||    
T  15461293 tttgtggtggtgtttatagatgatattctgatttattctaaaactgaagaggaacacgccgaacacttgaagattgtgttgcagattttgaaagaga 15461197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 16926020 - 16926132
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| ||||| |||||| |||| || |||||||| || || ||||| | |||    
T  16926020 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaagttatctaagtgtgaattctggttgaaagaggtaagttttcttgg 16926119  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  16926120 ccatgtcatttct 16926132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 282; Significance: 1e-158; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 23507849 - 23507484
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 23507650  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||||||||| ||||||||||||||||||    
T  23507649 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaaccagtgatgtgcaaagttgtctaagtgtgagttttggttgaagg 23507550  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |  ||||||||||||||||||||    
T  23507549 aagtgagtttccttggtcatgtgatttctaagggtggtatttatgtggatccttctaaggttgatg 23507484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 21935391 - 21935756
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 21935590  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  21935591 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 21935690  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  21935691 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 21935756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 24583375 - 24583010
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| |||||  |||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 24583176  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    | |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| || || || |||||||||||| ||||||||||||||||||    
T  24583175 tttgaggaagagcatgctgagcatttgagaattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 24583076  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||  |||||||| ||||||||||    
T  24583075 aagtgagtttccttggtcatgtgatttctaagggtggtatttctatagatccttccaaggttgatg 24583010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 23505149 - 23505044
Alignment:
Q  271 ttatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaagg 370  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |  ||||||||| ||||    
T  23505149 ttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtggatccttcaaagg 23505050  T
Q  371 ttgatg 376  Q
    ||||||    
T  23505049 ttgatg 23505044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 20250535 - 20250664
Alignment:
Q  59 gaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctta 158  Q
    |||| ||||||||||| |||||||||| ||| ||||||||||| ||| |||| | | |||||  |||||||||||| |||||||| || || ||||||||    
T  20250535 gaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaatatatgaataggattttccatcctta 20250634  T
Q  159 tttggaccgttttgtggtggtgtttataga 188  Q
    |||||| |  |||||||||||| |||||||    
T  20250635 tttggatcaatttgtggtggtgcttataga 20250664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 108 - 254
Target Start/End: Complemental strand, 21409220 - 21409074
Alignment:
Q  108 taatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcg 207  Q
    |||||||||||| || ||||||||||| |||||| | || |||||| ||||| | || |||||||| || |||||||||||||||||| ||   || ||     
T  21409220 taatgcgccaggagtatttatggaatatatgaattgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatattctgaaatactct 21409121  T
Q  208 aattctgaggaggagcattctgagcatttgaggattgtgttgcaagt 254  Q
    || ||||||||||| ||| | ||||||||||| ||||| ||||||||    
T  21409120 aagtctgaggaggaacatgccgagcatttgagaattgttttgcaagt 21409074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 20466358 - 20466630
Alignment:
Q  67 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 166  Q
    |||||||| || || |||||  ||||||| ||||| ||  ||||||| || ||||| |||||| | ||||||||| | || |||||| | ||||| || |    
T  20466358 tatggacattacgaatattcagtgatgccttttggtgttactaatgcaccgggtgtgtttatgaagtacatgaatcgtatttttcatgcgtatttagatc 20466457  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | || ||||| ||| | || |||||||||||| | || || || ||||| || || |||  ||||||||||| |||||| ||||||||  |||| |||||    
T  20466458 gcttcgtggttgtgatcatcgatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaa 20466557  T
Q  267 ccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
      | |||| ||| |||||||| ||| ||||||| |||||||| || |||||||| | ||| ||||| ||||||    
T  20466558 gaagttatatgccaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttatttct 20466630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 23473312 - 23473082
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| | |||||| ||||||||| | || |||||| | | |||||| ||||| ||||| ||||| || || ||||||||| |||| || |    
T  23473312 aatgcgccaggtgtgtctatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatgtactcaa 23473213  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    | ||||| || || ||| |||||| ||| |   |||| ||||||||  ||||||||||  | |||| |||||| ||||| ||| ||||||| | ||||||    
T  23473212 agtctgaagaagaacatgctgagcgtttaaaagttgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgagttctagttgaa 23473113  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || |||||||| | ||| ||||| ||||||    
T  23473112 tgaggtgagttttcttggccatgttatttct 23473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 14998090 - 14998251
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| ||||| ||| |||||||| ||| |||||| |||||||| |||    
T  14998090 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaggaacatgctgagcatctgaagattgttttgcaagtgttg 14998189  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  14998190 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 14998251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 37289847 - 37290008
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  37289847 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 37289946  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  37289947 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 37290008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 22136703 - 22136542
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || || |||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  22136703 tttggatcggtttgtggttgtgtttatcgacgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 22136604  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  22136603 aaagagaagaaactttttgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 22136542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 22331238 - 22331399
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  22331238 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 22331337  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  22331338 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 22331399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 27612389 - 27612228
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || || ||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  27612389 tttggatcggttcgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttg 27612290  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  27612289 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27612228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 338
Target Start/End: Complemental strand, 40710815 - 40710636
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||    
T  40710815 tttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 40710716  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| || |||||||||| ||| ||||| |||||    
T  40710715 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 40710636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 337
Target Start/End: Complemental strand, 22349886 - 22349776
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | |||    
T  22349886 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttgg 22349787  T
Q  327 tcatgtgattt 337  Q
     ||||| ||||    
T  22349786 ccatgttattt 22349776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 27520441 - 27520280
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||  | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||    
T  27520441 tttggatcggtttgtggttgtgtttatcgacgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 27520342  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  27520341 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27520280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 338
Target Start/End: Original strand, 27666911 - 27667020
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 328  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||||| ||| |    
T  27666911 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttggcc 27667010  T
Q  329 atgtgatttc 338  Q
    |||| |||||    
T  27667011 atgttatttc 27667020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 124 - 320
Target Start/End: Original strand, 29474389 - 29474585
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| || |||||| | || |||||| | | |||||| |  |||||||| |||||||| |||||||||||| | || || ||  |||| || || |    
T  29474389 tttatggagtatatgaatcgcatctttcatgcatttttggatcagtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 29474488  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    || |||||||| ||| |||||| |||||||| |||||||||||  || | | || ||| || || ||| |||| || |||||||| |||||||||||    
T  29474489 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgataaattatcgaagtgtgaattctggttgaaagaagtgagttt 29474585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 320
Target Start/End: Original strand, 21337595 - 21337806
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||||||||||||| | || |||||| | | ||||||  | || ||||| || || || || ||||||||| | || || |    
T  21337595 aatgcgccaggtgtgtttatggaatacatgaatcgtatttttcatgcgtttttggatagcttagtggttgtattcatcgacgatattttgatttactcca 21337694  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    | | ||| || || ||| ||||||| |||| |||||| ||||||||  ||||||||||  || | | |||||| || || ||| |||| || ||||||||    
T  21337695 agtttgaagaagaacatgctgagcacttgaagattgttttgcaagtgctgaaagagaagaaactttatgctaaattatcaaagtgtgaattctggttgaa 21337794  T
Q  309 ggaagtgagttt 320  Q
     || ||||||||    
T  21337795 agaggtgagttt 21337806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 339
Target Start/End: Complemental strand, 25428503 - 25428288
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | ||||||||| || ||||| || ||||| |||||||||||| | || || || ||||| || || |    
T  25428503 tttatggagtacatgaatcgcatctttcatgcatttttggaccgattcgtggttgtttttattgatgatattttgatttactccaagtctgaagaagaac 25428404  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || ||||||||||||   | || |||||||| |||||||||||  |  | | ||| || ||||||||| |||| || | |||||| |||||||| || |     
T  25428403 atgctgagcatttgaatctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctagttgaaagaagtgagctttct 25428304  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  25428303 tggacatgttatttct 25428288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 22463958 - 22463876
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgca 251  Q
    ||||||||||| |||||||||||||||||| | ||||| ||  |||| ||||||||| | || || |||| ||||||||||||    
T  22463958 tttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagcatgcagaacacttgaagattgtgttgca 22463876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 41772877 - 41772716
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||| ||| | || || ||  |||| || || ||| | |||||| ||| |||||| |||||||| |||    
T  41772877 tttggatcggtttgtggttgtgtttatcgacgatatcttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttg 41772778  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  | || | |||||| ||||||||  |||| || |||||||| |||||||||||    
T  41772777 aaagagaagaatttttatgctaaattgtctaaatgtgaattctggttgaaagaagtgagttt 41772716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 18781081 - 18780969
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || || ||||||||||| ||||| | |||    
T  18781081 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttttgcgaaattgtctaagtgtgaattctgattgaaggaagtaagttttcttgg 18780982  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  18780981 ccatgttatttct 18780969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 320
Target Start/End: Complemental strand, 19771925 - 19771834
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  19771925 gagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 19771834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 320
Target Start/End: Complemental strand, 16358518 - 16358376
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16358518 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 16358419  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||| ||||||||| |||| || |||||||| |||||||||||    
T  16358418 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 16358376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 26737028 - 26737258
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||| || ||||| |||||||| |||||||||  ||| |||||| | | ||| || ||||| ||||| ||||| || |||||||||||| | || || |    
T  26737028 aatgcacctggtgtgtttatggagtacatgaatcaaatttttcatgcatttttagatcgtttcgtggttgtgttcatcgatgatattttgatttactcca 26737127  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    | || || || || ||| |||| ||||||| |||| | ||||||||  ||||||| ||  | |||| |||||| || || ||| |||| || ||||||||    
T  26737128 agtccgaagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagataagaagttatatgctaaattatcaaagtgtgaattctggttgaa 26737227  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || || ||||| | ||| ||||| ||||||    
T  26737228 agaggtaagttttcttggccatgttatttct 26737258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 320
Target Start/End: Complemental strand, 34568510 - 34568368
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  34568510 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 34568411  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||| ||||||||| |||| || |||||||| |||||||||||    
T  34568410 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 34568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 20344289 - 20344192
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    ||||| ||||||||||| |||||||| ||  | ||||| ||   ||| ||||||||| | |||||| |||| ||||| |||||||| |||||||||||    
T  20344289 tttgttgtggtgtttattgatgatatcttaatttattccaagaatgaagaggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaa 20344192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Complemental strand, 20777920 - 20777891
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttg 198  Q
    ||||||||||||||||||||||||||||||    
T  20777920 tttgtggtggtgtttatagatgatattttg 20777891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 21562323 - 21562476
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||| | ||||| |||||||| |||||||||||||| || ||| | ||||| ||  | ||||| || |||||||||||||| ||  || | |||||    
T  21562323 ctaatgcgtctggtgtgtttatggagtacatgaatagaattttccatgcctatttagattggtttgtagttgtgtttatagatgacatcctgatttattc 21562422  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||  |||| || |||||| | |||||||| |  |||||||| ||||| |||||    
T  21562423 taagactgaagaagagcatgcagagcatttaaaaattgtgtttcaagtgttgaa 21562476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 27683751 - 27683912
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| ||  |||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  27683751 tttggatcggtttgtggttgtgtttatcgacaatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttg 27683850  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    | ||||||  |  | | |||||| ||||||||| |||| || ||||| || |||||||||||    
T  27683851 agagagaagaagctttatgctaaattgtctaagtgtgaattctggttcaaagaagtgagttt 27683912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 30139686 - 30139321
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 30139487  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  30139486 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 30139387  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  30139386 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 30139321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 30149237 - 30148872
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 30149038  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  30149037 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 30148938  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  30148937 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 30148872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 8272659 - 8273024
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 8272858  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || || || |||||||||||| ||||||||||||||||||    
T  8272859 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 8272958  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  8272959 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 8273024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 15611983 - 15611618
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 15611784  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||| |||||||| |||||||| ||||  || ||||| |||||||||||||||||||||||||||||||    
T  15611783 tctgaggaagagcatgctgagcatttgaggattgtcttgcaagttttgaaagataaccggttgtgtgccaagttgtctaagcgtgagttttggttgaagg 15611684  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  15611683 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 15611618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 11 - 369
Target Start/End: Original strand, 6151113 - 6151471
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||     
T  6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaa 6151312  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  6151313 tctgaggaggagcatgctgagcatctgacgattgtgttgcaagtgttgaaggagaaccagttatgtgctaagttgtctaagtgcgagttttggttgaagg 6151412  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaag 369  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  |||||| ||||||    
T  6151413 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccgtctaag 6151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 13965612 - 13965978
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||| ||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 13965811  T
Q  211 tctgagg-aggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaag 309  Q
    ||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||| || | ||| || ||||||||| |||||||||||||||||    
T  13965812 tctgaggaagaagcatgctgagcatttgaggattgtgttgcaagacttgaaagagaaccagttgtctgccaatttgtctaagtgtgagttttggttgaag 13965911  T
Q  310 gaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  13965912 gaagtgagttttcttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 13965978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 25768198 - 25767833
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||||||||||||||| || || |||||||||||||||| ||||  ||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    | ||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||     
T  25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcaaaa 25767999  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  25767998 tctgagaaggagcatgctgagcatttgaggattatgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 25767899  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||  ||||||||||| |  ||||||||| || |||||||    
T  25767898 aagtgagtttccttggtcatgtgatttctcagggtggtatttatgtggatccttcgaaagttgatg 25767833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 11 - 317
Target Start/End: Original strand, 15948730 - 15949036
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||  ||||||||||||||||||| ||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||     
T  15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccgatttgtggtggttttcatagatgatattttggtgtattcgaag 15948929  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||| || || || |||||||||||| |||| |||||||||||||    
T  15948930 tctgaggaagagcatgttgagcatctgaggattgtgttgcaagtcttgaaagagaaccagttgtgagccaagttgtctaagtgtgaattttggttgaagg 15949029  T
Q  311 aagtgag 317  Q
    |||||||    
T  15949030 aagtgag 15949036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 256 - 376
Target Start/End: Complemental strand, 12795871 - 12795751
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 355  Q
    ||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||| ||||||||     
T  12795871 ttgaaagagaaccaattgtgtgccaagttgtctaagtgtgagtcttggttgaaggaagtgagttttcttggtcatgtgatttctaagggtagtatttctg 12795772  T
Q  356 gggatccttctaaggttgatg 376  Q
     ||||||||||||||||||||    
T  12795771 tggatccttctaaggttgatg 12795751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 377
Target Start/End: Complemental strand, 18915361 - 18915240
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 355  Q
    ||||| |||||| | ||||||||||||||||| ||| |||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||     
T  18915361 ttgaaggagaactagttatgtgctaagttgtccaagtgtgaattttggttgaaggaagtaagtttccttggtcatgtgatttctaagggtggtatttctg 18915262  T
Q  356 gggatccttctaaggttgatgt 377  Q
      |||||||| |||||||||||    
T  18915261 ttgatccttccaaggttgatgt 18915240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 260 - 376
Target Start/End: Complemental strand, 16258774 - 16258658
Alignment:
Q  260 aagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctaggga 359  Q
    ||||||| || || ||||| |||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    |||    
T  16258774 aagagaatcagttgtgtgcaaagttgtctaagtgcgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttacgtgga 16258675  T
Q  360 tccttctaaggttgatg 376  Q
    |||||||||||||||||    
T  16258674 tccttctaaggttgatg 16258658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 199 - 338
Target Start/End: Original strand, 6710865 - 6711004
Alignment:
Q  199 gtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagt 298  Q
    |||||||| || || |||||||||||| ||||||||||||||||||||||||  || ||||| ||||| || || | |||||||||||||||| ||||||    
T  6710865 gtgtattcaaagtcagaggaggagcatgctgagcatttgaggattgtgttgcgtgttttgaaggagaatcagttgtttgctaagttgtctaagtgtgagt 6710964  T
Q  299 tttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    |||||||   |||||||||||||| |||| ||||||||||    
T  6710965 tttggttttgggaagtgagtttccttggttatgtgatttc 6711004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 376
Target Start/End: Original strand, 55514237 - 55514357
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 355  Q
    ||||| ||||| || ||||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||| ||||||||| ||      
T  55514237 ttgaaggagaatcatttatgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtggtatctccg 55514336  T
Q  356 gggatccttctaaggttgatg 376  Q
     |||||| || ||||||||||    
T  55514337 tggatccatcaaaggttgatg 55514357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 159 - 339
Target Start/End: Complemental strand, 15340991 - 15340811
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||| ||| |||    
T  15340991 tttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcgagtgttg 15340892  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    ||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | ||| ||||| ||||||    
T  15340891 aaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 15340811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 159 - 339
Target Start/End: Original strand, 15400925 - 15401105
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||| ||| |||    
T  15400925 tttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcgagtgttg 15401024  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    ||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | ||| ||||| ||||||    
T  15401025 aaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 15401105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 124 - 320
Target Start/End: Original strand, 15723307 - 15723503
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| || |||||| | || |||||| | | |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || |    
T  15723307 tttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 15723406  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    || |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||| ||| |||| || |||||||| |||||||||||    
T  15723407 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagtgagttt 15723503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 15261402 - 15261172
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || || || |||||||||||| | ||||| |    
T  15261402 aatgcgccaggtgtgtttatggagtacatgaatcgtatctttcatgcgtttttggatcgtttcgtggttgtattcatcgatgatattttgatatattcca 15261303  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  |||| || || ||| |||||||||||| |||||| ||||||||  |||| |||||  |  | | |||||| ||||  ||| |||| || ||||||||    
T  15261302 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagaagctttatgctaaattgtaaaagtgtgaattctggttgaa 15261203  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || |||||||| | ||| ||||| ||||||    
T  15261202 agaggtgagttttcttggccatgttatttct 15261172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 55498611 - 55498486
Alignment:
Q  132 atacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgag 231  Q
    ||||||||| || || || ||||||||||||||    ||  ||||||||||||| |||||||| || ||||||||||| || |||||| ||||| | |||    
T  55498611 atacatgaaaaggattttccatccttatttggatatgttcatggtggtgtttatcgatgatatcttagtgtattcgaagtcggaggagcagcatgcagag 55498512  T
Q  232 catttgaggattgtgttgcaagtctt 257  Q
    ||||| ||||||||||||||| ||||    
T  55498511 catttcaggattgtgttgcaaatctt 55498486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 320
Target Start/End: Original strand, 11950318 - 11950466
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaat 271  Q
    ||||| |||||||| ||||||||| || | ||||| ||  |||| || |||||| | || ||||||| ||||||||||||||| |||||||||||  | |    
T  11950318 gtggttgtgtttattgatgatattctgatttattctaagactgaagaagagcatgcagaacatttgaagattgtgttgcaagtattgaaagagaagaagt 11950417  T
Q  272 tatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    | | |||||||||||| ||| ||||||| ||||| |  |||||||||||    
T  11950418 tgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 11950466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 11889636 - 11889783
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||||||||| || ||||||||||||||| | || |||||| | ||||| || || || ||||| ||||| || |||||||||||| | || ||    
T  11889636 ctaatgcgccaggtgtgttcatggaatacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcattgatgatattttgatatactc 11889735  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagt 254  Q
     || | | |||| || ||| |||||||||||| |||||| ||||||||    
T  11889736 taagtttaaggaagaacatgctgagcatttgaagattgttttgcaagt 11889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 18751558 - 18751459
Alignment:
Q  276 tgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgat 375  Q
    |||||||||||| ||| ||||||||| ||||  |||||||||||||| | ||||||||||||||| ||||||||| |||  |||||| |  |||||||||    
T  18751558 tgctaagttgtcgaagtgtgagtttttgttgcgggaagtgagtttcctttgtcatgtgatttctaagggtggtatctctgtggatccgttgaaggttgat 18751459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 13254412 - 13254251
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  13254412 tttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 13254313  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  13254312 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 13254251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 320
Target Start/End: Original strand, 14874875 - 14875068
Alignment:
Q  127 atggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcatt 226  Q
    ||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || || ||  |||| || || |||     
T  14874875 atggagtacatgaatcgcatctttcatgcctttttggatcgattcgtggttgtttttatcgatgatattttgatttactccaagactgaagaagaacatg 14874974  T
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| ||||||| |||||||| ||||| |||||    
T  14874975 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaagtaagttt 14875068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 15346653 - 15346814
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  15346653 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 15346752  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  15346753 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 15346814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 16693867 - 16693706
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    ||||||||||| || |||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  || | | ||    
T  16693867 gtgtttatagacgaaattttgatatactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 16693768  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    |||| ||||||||| ||||||| |||||||| ||||| ||||| | ||||||||| ||||||    
T  16693767 ctaaattgtctaagtgtgagttctggttgaaagaagtaagttttcttggtcatgttatttct 16693706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 6602390 - 6602278
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||||| |||    
T  6602390 ctgagcatctgacgattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttgg 6602291  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  6602290 ccatgttatttct 6602278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 20060472 - 20060623
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| | |||||| ||| |||||| |||||||| |||||||||||      
T  20060472 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaaga 20060571  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    || | | ||| || ||||||||| |||| ||||||||||| |||||||||||    
T  20060572 aactttatgccaaattgtctaagtgtgaattttggttgaaagaagtgagttt 20060623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 339
Target Start/End: Complemental strand, 41179241 - 41179074
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaat 271  Q
    |||||||| ||||| ||||||||| || | ||||||||  |||| || |||||||| || ||| |||| |||||| ||||||| |||||||||||  | |    
T  41179241 gtggtggtatttattgatgatattctgatttattcgaagactgaagaagagcattcagaacatctgagaattgtgctgcaagttttgaaagagaagaagt 41179142  T
Q  272 tatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    | | ||| || ||||| ||  ||||||||||| | |  ||||||||||||| ||||||| | ||||||    
T  41179141 tgtatgccaaattgtcgaaatgtgagttttggctaagtgaagtgagtttccttggtcatattatttct 41179074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 10007258 - 10007161
Alignment:
Q  223 cattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  10007258 cattctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10007161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 320
Target Start/End: Complemental strand, 14088457 - 14088244
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  14088457 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 14088358  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    ||   ||||||| |||||| | || ||| |||||||||| |||||||| |||||||||||  | || | ||| || ||||| ||| | |||||||||||     
T  14088357 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 14088258  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  14088257 agtgaagtgagttt 14088244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 15014112 - 15014325
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| || || ||||||||||| |||||| | || |||||| |||||||||| || ||||| || |||||||||||||||||| |  | || ||    
T  15014112 ctaacgcgcctggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatcgatttgttgttgtgtttatagatgatattctaatatactc 15014211  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     ||  | |||||||| ||| | |||||||  || ||||| ||||||||  |||| |||||  | |||| ||| ||||| || ||| | || || ||||||    
T  15014212 taagaccgaggaggaacatgccgagcattgtagaattgttttgcaagtgctgaaggagaagaagttatatgccaagttatcgaagtgcgaattctggttg 15014311  T
Q  307 aaggaagtgagttt 320  Q
    || |||||||||||    
T  15014312 aacgaagtgagttt 15014325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 340
Target Start/End: Original strand, 16805423 - 16805536
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||| ||||| | |||    
T  16805423 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttgg 16805522  T
Q  327 tcatgtgatttcta 340  Q
     ||||| |||||||    
T  16805523 ccatgttatttcta 16805536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 28756102 - 28755949
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||| ||  | |||||    
T  28756102 ctaatgcgccgggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 28756003  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| |||||||||||||| |||||    
T  28756002 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaa 28755949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 15587810 - 15587961
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| |||||||| || ||||||||| | || || ||  |||| || || |||  ||||||| ||| |||||| || ||||| |||||||||||      
T  15587810 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgttgagcatctgaagattgtcttacaagtgttgaaagagaaga 15587909  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  15587910 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 15587961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 338
Target Start/End: Original strand, 5423408 - 5423517
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 328  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || | |||||| ||||||||||||| ||| |    
T  5423408 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattcttgttgaatgaagtgagtttccttggcc 5423507  T
Q  329 atgtgatttc 338  Q
    |||| |||||    
T  5423508 atgttatttc 5423517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 10907868 - 10907771
Alignment:
Q  223 cattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  10907868 cattttgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10907771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 13970465 - 13970678
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  13970465 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 13970564  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    ||   ||||||| |||||| | || ||| ||||| |||| |||||||| |||||||||||  | || | ||| || ||||| ||| | |||||||||||     
T  13970565 gagaactgaggaagagcatgcagaacatctgagggttgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 13970664  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  13970665 agtgaagtgagttt 13970678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 16755109 - 16755288
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| | || ||||||| |||||| || ||||| |||    
T  16755109 tttggatcggtttgtggttgtgtttattgacgatattttgatttactccaagactgaagaagaacatgcggaacatttgaagattgttttacaagtgttg 16755208  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    ||||||||  || | | |||||| |||| |  | |||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  16755209 aaagagaagaaactttatgctaaattgtttgtgtgtgaattctggttgaatgaagtgagtttccttggccatgttatttc 16755288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 320
Target Start/End: Complemental strand, 48427099 - 48427008
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  48427099 gagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 48427008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 320
Target Start/End: Complemental strand, 16637476 - 16637334
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16637476 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 16637377  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||| ||||||||| |||| || |||||||| |||||||||||    
T  16637376 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 16637334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 41
Target Start/End: Complemental strand, 17200514 - 17200484
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatat 41  Q
    |||||||||||||||||||||||||||||||    
T  17200514 atcatcagattagagtgaaggcggaagatat 17200484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 53383523 - 53383605
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  53383523 ttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttggccatgttatttc 53383605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 338
Target Start/End: Complemental strand, 3687595 - 3687486
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 328  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | |||||| || |||||| |||| || |||||||| ||||||||||| |  ||||    
T  3687595 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaagtgagttttctaggtc 3687496  T
Q  329 atgtgatttc 338  Q
    |||| |||||    
T  3687495 atgttatttc 3687486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 16328067 - 16328164
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    ||||| ||||||||||| |||||||||||  | ||||| ||   ||| ||||||||| | |||||| |||| ||||| |||||||  |||||||||||    
T  16328067 tttgttgtggtgtttattgatgatattttaatctattctaagaatgaagaggagcatgcagagcatctgagaattgtattgcaagatttgaaagagaa 16328164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 12180009 - 12179909
Alignment:
Q  220 gagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtt 319  Q
    |||||| | |||||| ||| ||||||||||||| | |||||||| ||  | || | |||||||||||| ||| ||||||| ||||| |  ||||||||||    
T  12180009 gagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagtt 12179910  T
Q  320 t 320  Q
    |    
T  12179909 t 12179909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 12359005 - 12359085
Alignment:
Q  240 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| |||||||| |||||||||||  | || | |||||||||||| ||| ||||||| ||||| |  |||||||||||    
T  12359005 gattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 12359085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 265
Target Start/End: Original strand, 13318829 - 13319005
Alignment:
Q  89 tgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttataga 188  Q
    |||||||||| || ||  |||||||||| ||||| || ||||| || |||||  |||| |||||| ||| | ||||    ||||||||||| ||||| ||    
T  13318829 tgatgccattcggtgttactaatgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttttctggataaatttgtggtggtatttattga 13318928  T
Q  189 tgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagaga 265  Q
    |||||||||  | ||||| ||  || | ||||||||| | || ||| ||| |||| |||||||| | ||||||||||    
T  13318929 tgatattttaatttattccaagactaaagaggagcatgcagaacatctgaagattatgttgcaaattttgaaagaga 13319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 282; Significance: 1e-158; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 20829485 - 20829850
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 20829684  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  20829685 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 20829784  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  20829785 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 20829850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 11 - 339
Target Start/End: Complemental strand, 20927320 - 20926992
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||     
T  20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtggtggtgttcatagatgatattttggtgtattcgaag 20927121  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  20927120 tctgaggaagagcatgatgagcatttgaggattgtgttgcaagtcttgaaggagaatcagttatgtgctaagttatctaagtgtgagttttggttgaagg 20927021  T
Q  311 aagtgagtttccatggtcatgtgatttct 339  Q
    |||||| ||||| |||||| |||||||||    
T  20927020 aagtgattttccttggtcacgtgatttct 20926992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 350
Target Start/End: Original strand, 41215949 - 41216288
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||||| || ||| |||| |||||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||     
T  41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgttttatggtggtgtttattgatgatattttggtgtattcgaag 41216148  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||    |||||| |||||||||| ||| ||||||||||||||  ||    
T  41216149 tctgaggaggagcatgctgagcatttgaggattgtgttgcgagtcttgaaggagaattggttatgttctaagttgtcgaagtgtgagttttggttgcggg 41216248  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtat 350  Q
    |||||||||||| | ||||| ||||||||| |||| ||||    
T  41216249 aagtgagtttccttagtcatatgatttctaagggtagtat 41216288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 20527319 - 20527147
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||| ||||||||||||||| ||||||| |||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20527319 atcatctgattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20527220  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgttt 183  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20527219 tgcaccaggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttt 20527147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 37 - 350
Target Start/End: Original strand, 21200998 - 21201311
Alignment:
Q  37 gatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaataca 136  Q
    |||||||||||||| | |||| ||||||| ||||| |||||||| |||||| ||||||||||| | ||  ||||| ||||  ||||||| |||||||| |    
T  21200998 gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatata 21201097  T
Q  137 tgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcattt 236  Q
    ||||||||||||||||||||||| || || | ||||||| ||  |||||||||||||| |||||||||||||| |  ||||||||||||  | ||||| |    
T  21201098 tgaatagaatatttcatccttatctgtactggtttgtggaggcttttatagatgatatcttggtgtattcgaagttggaggaggagcatgttaagcatct 21201197  T
Q  237 gaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatt 336  Q
    |||||||||||||||   |||||| || ||  | || | |||||| ||||| ||| |||| |||||| || |||||||||| || | |||||||||||||    
T  21201198 gaggattgtgttgcataccttgaaggataagaagttgtttgctaacttgtcgaagtgtgaattttggctgcaggaagtgagcttacctggtcatgtgatt 21201297  T
Q  337 tctacgggtggtat 350  Q
    || | |||||||||    
T  21201298 tcgatgggtggtat 21201311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
Q  19 attagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccag 118  Q
    |||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag 22133956  T
Q  119 gtgtctt 125  Q
    |||||||    
T  22133957 gtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatga 80  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 21839068 - 21838907
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  21839068 tttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 21838969  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  21838968 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 21838907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 21832420 - 21832259
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  21832420 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 21832321  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  21832320 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 21832259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 33389270 - 33389431
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  33389270 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 33389369  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  33389370 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 33389431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 51331734 - 51331895
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| | |||||| ||| |||||| |||||||| |||    
T  51331734 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgcggagcatctgaagattgttttgcaagtgttg 51331833  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  | || | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  51331834 aaagagaagaagttttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 51331895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 19108467 - 19108306
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| |||||||||||| | || || ||  ||||  | || ||| |||||||| ||| |||||| || ||||| |||||||||||  || | | ||    
T  19108467 gtgtttatcgatgatattttgatttactctaagactgaaaaagaacatgctgagcatctgaagattgtcttccaagtgttgaaagagaagaaactttatg 19108368  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    | || ||||||||| ||||||| |||||||| ||||||||||| | ||| ||||| ||||||    
T  19108367 ccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 19108306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 31538186 - 31538339
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  31538186 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 31538285  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  31538286 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 31538339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 37679250 - 37679097
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| ||||||||| |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  37679250 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 37679151  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||| ||||| | |||||| |||| ||||| |||||||| |||||    
T  37679150 caagaatgaggagaagcatgcagagcatctgagaattgtattgcaagtgttgaa 37679097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 48425074 - 48424921
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  48425074 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 48424975  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  48424974 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 48424921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 52987942 - 52987789
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  52987942 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 52987843  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  52987842 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 52987789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 20855011 - 20855093
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgca 251  Q
    ||||||||||| |||||||||||||||||| | ||||| ||  |||| ||||||||| | || || |||| ||||||||||||    
T  20855011 tttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagcatgcagaacacttgaagattgtgttgca 20855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 337
Target Start/End: Original strand, 21862574 - 21862792
Alignment:
Q  119 gtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgagga 218  Q
    |||| ||||||||  |||||||| | || |||||| | | |||||||||||| ||||| || ||||| ||||| |||||  | || || ||  |||||||    
T  21862574 gtgtgtttatggagcacatgaatcgcatttttcatgcatttttggaccgtttcgtggttgtttttattgatgacattttaatttactccaagactgagga 21862673  T
Q  219 ggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagt 318  Q
     || ||| |||||||||||| ||| || |||||||| || ||||||||  |  | | |||||| || |||||| |||| || |||||||| || ||||||    
T  21862674 agaacatgctgagcatttgaagatggttttgcaagtgttcaaagagaagaagctttatgctaaattatctaagtgtgaattctggttgaaagaggtgagt 21862773  T
Q  319 ttccatggtcatgtgattt 337  Q
    || | ||| ||||| ||||    
T  21862774 tttcttggacatgttattt 21862792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 41351984 - 41352082
Alignment:
Q  240 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||| | ||||||||| |||||    
T  41351984 gattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggtcatgttatttc 41352082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 338
Target Start/End: Original strand, 16348907 - 16349016
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 328  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||| |  ||||    
T  16348907 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggtc 16349006  T
Q  329 atgtgatttc 338  Q
    |||| |||||    
T  16349007 atgttatttc 16349016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 17043275 - 17043436
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| |||||||||||| | || || ||  || | || || ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  17043275 gtgtttatcgatgatattttgatttactccaagactaaagaagaacatgctgagcatatgaagattgtcttgcaagtattgaaagagaagaaactttatg 17043374  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    |||| ||||| ||| |||| || |||||||| ||||| ||||| | ||| ||||| ||||||    
T  17043375 ctaaattgtcaaagtgtgaattctggttgaaagaagtaagttttcttggccatgttatttct 17043436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 21026223 - 21026130
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||||||  | |||||| ||||||| |||||||| |||||||||||    
T  21026223 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaaatatctaagtgtgagttctggttgaaagaagtgagttt 21026130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 21234040 - 21234152
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||| ||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||| ||||| | |||    
T  21234040 ctgaacatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttgg 21234139  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  21234140 ccatgttatttct 21234152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 339
Target Start/End: Original strand, 24792857 - 24793037
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || || ||||| || ||||| |||||||||||| | || || ||  |||| || || |||  ||||||| ||| |||||| |||||||| |||    
T  24792857 tttggatcggttcgtggttgtttttattgatgatattttgatttactccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttg 24792956  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    ||||| ||  || | | |||||| || |||||| ||||||| |||||||| ||||| ||||| | ||| ||||| ||||||    
T  24792957 aaagaaaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaagtaagttttcttggccatgttatttct 24793037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 305
Target Start/End: Original strand, 20834154 - 20834287
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaat 271  Q
    ||||| |||||||| ||||||||| || | ||||| ||  |||| || || ||| | || ||||||| ||||||||||||| | |||||||||||    |    
T  20834154 gtggttgtgtttattgatgatattctgatttattcaaagactgaagaagaacatgcagaacatttgaagattgtgttgcaaattttgaaagagaaaaggt 20834253  T
Q  272 tatgtgctaagttgtctaagcgtgagttttggtt 305  Q
    | | |||||||||||| ||| ||||||| |||||    
T  20834254 tgtatgctaagttgtcgaagtgtgagttctggtt 20834287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 320
Target Start/End: Original strand, 24097857 - 24098005
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaat 271  Q
    |||||||| ||||| ||||| ||| || | ||||| ||  |||| ||||||||| | ||  || ||| |||||| ||| ||||||||||||| ||  | |    
T  24097857 gtggtggtatttattgatgacattctgatctattctaagactgaagaggagcatgcagaaaatctgaagattgtattgtaagtcttgaaagaaaagaagt 24097956  T
Q  272 tatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    | | |||||||||||| ||| ||||||| ||||| |  |||||||||||    
T  24097957 tgtatgctaagttgtcaaagtgtgagttctggttaagtgaagtgagttt 24098005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 278; Significance: 1e-155; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 42540 - 42175
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 42341  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  42340 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 42241  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  42240 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 42175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 31797 - 32010
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  31797 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 31896  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    ||   ||||||| |||||| | || ||| |||||||||| |||||||| |||||||||||  | || | ||| || ||||| ||| | |||||||||||     
T  31897 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 31996  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  31997 agtgaagtgagttt 32010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 26290 - 26655
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 26489  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  26490 tctgaggaagagcatgctgaacatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 26589  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||  |||||| | |||||||||||    
T  26590 aagtgagtttccttggtcatgtgatttctaagggtggcatttctgtggatccatttaaggttgatg 26655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 270; Significance: 1e-151; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 24829749 - 24830114
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 24829948  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| | |||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||||||| ||||||||||||| ||||    
T  24829949 tctgaggaagagcatgcggagcatttgaggattgtgttgcaattcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttcaagg 24830048  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||   |||||||| ||||||||||    
T  24830049 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtagatccttccaaggttgatg 24830114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 6 - 376
Target Start/End: Complemental strand, 22279992 - 22279622
Alignment:
Q  6 tggacatcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagta 105  Q
    |||| |||||||||| ||||| ||| | ||| ||||||||||||| | |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  22279992 tggatatcatcagatcagagtaaagactgaatatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagta 22279893  T
Q  106 tctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtatt 205  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  22279892 tctaatgcgccatgtgtctttatggaatacatgaatagaatattttatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtatt 22279793  T
Q  206 cgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggtt 305  Q
    |||| ||  ||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| |||| ||||||||    
T  22279792 cgaaatcgaaggaggagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaaccagttatgtgcaaagttgtctaagtgtgaattttggtt 22279693  T
Q  306 gaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||||||  |||||| |||||||||||||    
T  22279692 gaaggaagtgagtttccttggtcatgtgatttctaagtgtggtatttctgtggatccgtctaaggttgatg 22279622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 24568229 - 24568594
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||  |||||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||     
T  24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtgttgtttatagattatattttggtgtattcgaag 24568428  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||  ||    
T  24568429 tctgaggaggagcatgttgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttagttgcggg 24568528  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |  |||||| |||| ||||||||    
T  24568529 aagtgagtttccttggtcatgtgatttctaagggtggtatttatgtggatccgtctagggttgatg 24568594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 22760130 - 22760495
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||||||||||  |    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||| ||||||||| ||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||     
T  22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtggtggtgtttatagatgatattttggtgtatttgaaa 22760329  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| || ||||| ||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||| || ||||||||||| |||    
T  22760330 tctgaggaggagcatgctaagcatctgaggattgtgttgcaagttttggaggagaaccagttatgtgctaagttgtctaagtgtaagttttggttgcagg 22760429  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| |||||||||||||| || ||||| ||||||   |||||| || ||||||||||    
T  22760430 aagtgagtttccttggtcatgtgatttttaagggtgatatttccgtggatccgtcgaaggttgatg 22760495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 11 - 350
Target Start/End: Complemental strand, 25130491 - 25130152
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||   ||||||| |||||||||||||||||| ||||||||||||| ||| ||||     
T  25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccgctttgtggtggtgtttatatatgatattttggtatatacgaag 25130292  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||| || ||||| |  ||||||||||||||||  ||| ||||||||||||||  |     
T  25130291 tctgaggaggagcatgctgagcatttgagggttgtgttgcgagtcttaaaggagaatcggttatgtgctaagttgttgaagtgtgagttttggttgcgga 25130192  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtat 350  Q
    |||||||||||  ||||||||||||||||| |||||||||    
T  25130191 aagtgagtttctttggtcatgtgatttctaagggtggtat 25130152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 335
Target Start/End: Original strand, 10037941 - 10038217
Alignment:
Q  59 gaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctta 158  Q
    ||||||||||||| |||||||| || | | ||||| ||||||| ||  |||||||||  |||||||| |||||||||||||||||||| || ||||||||    
T  10037941 gaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctta 10038040  T
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| |  ||| |||||||||||||||| ||||| ||| |||||||||| || |||||||||||| | |||||| | ||||||||||||||    |||    
T  10038041 tttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattgtgttgcatactttg 10038140  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgat 335  Q
    ||||||||  | || | || ||||||||| ||| ||||||||| ||||  |||||||||||||| ||||||||||||    
T  10038141 aaagagaataagttgtttgataagttgtcaaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtgat 10038217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 59 - 335
Target Start/End: Original strand, 10098326 - 10098602
Alignment:
Q  59 gaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctta 158  Q
    ||||||||||||| |||||||| || | | ||||| ||||||| ||  |||||||||  |||||||| |||||||||||||||||||| || ||||||||    
T  10098326 gaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctta 10098425  T
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| |  ||| |||||||||||||||| ||||| ||| |||||||||| || |||||||||||| | |||||| | ||||||||||||||    |||    
T  10098426 tttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcggagcatctaaggattgtgttgcatactttg 10098525  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgat 335  Q
    ||||||||  | || | || ||||||||  ||| ||||||||| ||||  |||||||||||||| ||||||||||||    
T  10098526 aaagagaataagttgtttgataagttgttaaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtgat 10098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 256 - 376
Target Start/End: Original strand, 12639039 - 12639159
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 355  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||     
T  12639039 ttgaaagagaatcagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 12639138  T
Q  356 gggatccttctaaggttgatg 376  Q
     |||||| |||||||| ||||    
T  12639139 tggatccgtctaaggtcgatg 12639159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 30010841 - 30011054
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    ||||||||||||| || |||||| |||| |||||| | || |||||| ||||| |||| |||||||| || ||||||||||||||||||||| | || ||    
T  30010841 ctaatgcgccaggagtgtttatgaaatatatgaatcgtatttttcatacttatctggatcgttttgttgtcgtgtttatagatgatattttgatatactc 30010940  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     || || |||||||| |||   ||||||||||| ||||| ||||||||  || |||||||  | |||| ||| ||||| || | | | || || ||||||    
T  30010941 caagtccgaggaggaacatgtcgagcatttgagaattgttttgcaagtgctgcaagagaagaagttatatgccaagttatcgatgtgcgaattctggttg 30011040  T
Q  307 aaggaagtgagttt 320  Q
    || |||||||||||    
T  30011041 aacgaagtgagttt 30011054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 23112522 - 23112369
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    ||||||||||  |||| |||||||| |||||||||||||| || ||| ||||| |||| |  ||||| || |||||||| |||||||| ||| | |||||    
T  23112522 ctaatgcgcctagtgtgtttatggagtacatgaatagaattttccatgcttatctggatcagtttgtagttgtgtttattgatgatatcttgatttattc 23112423  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||  |||| || |||||| | |||||||| | ||||||||||||||| |||||    
T  23112422 taagactgaagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaa 23112369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 30209574 - 30209787
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||  || || ||||||||||| ||||||   || |||||| ||||| |||| |||||||| || ||||||||||||||||||||| | || ||    
T  30209574 ctaatgcgctgggagtgtttatggaatatatgaatcatatttttcatacttatctggatcgttttgttgttgtgtttatagatgatattttgatatactc 30209673  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     || || |||||||| |||   || |||||||| ||||| || |||||  ||||||||||  | |||| ||| ||||| || ||| | || || ||||||    
T  30209674 caagtccgaggaggaacatgtcgaacatttgagaattgtttttcaagtgctgaaagagaagaagttatctgccaagttatcgaagtgcgaattctggttg 30209773  T
Q  307 aaggaagtgagttt 320  Q
    || |||||||||||    
T  30209774 aacgaagtgagttt 30209787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 320
Target Start/End: Complemental strand, 27373038 - 27372842
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    ||||||||||| |||||| | || || ||| | | |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || |    
T  27373038 tttatggaatatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 27372939  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    || |||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  27372938 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27372842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 24818889 - 24819119
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||| ||| ||||| | || |||||| | ||||| || || ||  |||| ||||| || |||||||||||| | || || |    
T  24818889 aatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactcta 24818988  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  |||| || || ||| ||||||||||||||||||| ||||||||  |||| |||||  |  | | |||||||||||| ||| ||||  | ||||||||    
T  24818989 agactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaa 24819088  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     ||||| ||||| | ||| ||||| ||||||    
T  24819089 tgaagtaagttttcttggccatgttatttct 24819119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 1065537 - 1065384
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| ||||||||| |||| || ||| ||| | ||||    ||||||||||| ||||| |||||||||||  | |||||    
T  1065537 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgtggtggtatttattgatgatattttaatctattc 1065438  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| || ||||||||||| |||||    
T  1065437 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 1065384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 21143769 - 21143930
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    ||||| || |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  21143769 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 21143868  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    | || ||||||||| ||||||| |||||||| ||||||||||| | ||| ||||| ||||||    
T  21143869 ccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 21143930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 24711768 - 24711607
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  24711768 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 24711669  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  24711668 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 24711607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 41607094 - 41607255
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  41607094 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 41607193  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  41607194 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 41607255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 24875527 - 24875639
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | |||    
T  24875527 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttgg 24875626  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  24875627 ccatgttatttct 24875639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 266
Target Start/End: Original strand, 23098675 - 23098834
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||||| || |||||| ||| | ||||  | || |||||||||||||| |||||||||||  | |||||    
T  23098675 ctaatgcgcctggtgtatttatggagtatatgaataggatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 23098774  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
     ||  |||| || |||||| | |||||| |||||||||| || || ||  ||||||||||    
T  23098775 taagactgaagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaa 23098834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 24264094 - 24263943
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| |||||||| || ||||||||| | || || ||  |||| ||||| |||  ||||||| ||| |||||| |||||||| |||||||||||      
T  24264094 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaggaacatgttgagcatctgaagattgttttgcaagtgttgaaagagaaga 24263995  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  24263994 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 24263943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 10870584 - 10870423
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||    
T  10870584 tttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 10870485  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  10870484 aaagagaagaaactttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10870423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 27219750 - 27219589
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||    
T  27219750 tttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 27219651  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  27219650 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27219589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 27789526 - 27789294
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||||||| || | |||||    
T  27789526 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 27789427  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    |||  |||| || |||||| | || ||| |||| |||||| ||||||| |||||||||||  | || | ||| || ||||| ||  ||||||||||| |     
T  27789426 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 27789327  T
Q  307 aaggaagtgagtttccatggtcatgtgatttct 339  Q
    |  ||||||||||||| ||||||| | ||||||    
T  27789326 agtgaagtgagtttccttggtcatattatttct 27789294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 320
Target Start/End: Complemental strand, 23189633 - 23189492
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    ||||||||||| ||||||||| | || || ||  ||||||| || ||| |||||||| ||| |||||| || ||||| |||||||||||  || | | ||    
T  23189633 gtgtttatagacgatattttgatttactccaagactgaggaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 23189534  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||| ||||||||| |||| || ||||||||| |||| |||||    
T  23189533 ctaaattgtctaagtgtga-ttctggttgaagaaagtaagttt 23189492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 27208894 - 27208987
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagaga 265  Q
    ||||||||||||||||||||||||||| | ||||| ||  |||| |||| |||| | |||||  ||| ||||||||||||  | ||||||||||    
T  27208894 gtggtggtgtttatagatgatattttgatttattctaagactgaagaggtgcatgcagagcacctgaagattgtgttgcagattttgaaagaga 27208987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 44384347 - 44384440
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  44384347 ctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 44384440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 263
Target Start/End: Complemental strand, 12576139 - 12575983
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||| ||| || | |||||    
T  12576139 ctaacgcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttttggataaattcgtggtggtatttattgatgacattctgatttattc 12576040  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
    |||  |||| || |||||| | || ||| |||| |||||||||||||| ||||||||    
T  12576039 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 12575983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 16927075 - 16926915
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16927075 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 16926976  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    |||| ||||||||| |||| || |||||||| || |||||||||| ||| ||||| |||||    
T  16926975 ctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 16926915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 17000715 - 17000555
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  17000715 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 17000616  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    |||| ||||||||| |||| || |||||||| || |||||||||| ||| ||||| |||||    
T  17000615 ctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 17000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 320
Target Start/End: Original strand, 22323635 - 22323726
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  22323635 gagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 22323726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 23295659 - 23295508
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| |||||||| ||||| ||  || | ||||| ||  |||| || |||||| | || ||| ||| ||||||||| ||||| |||||||||||      
T  23295659 tttgtggttgtgtttattgatgacatcctgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttacaagttttgaaagagaaaa 23295560  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    | || | |||||||||||| ||| ||||||| ||||| |  |||||||||||    
T  23295559 agttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagttt 23295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 320
Target Start/End: Complemental strand, 9485931 - 9485789
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  9485931 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 9485832  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||| ||||||||| |||| || |||||||| |||||||||||    
T  9485831 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 9485789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 320
Target Start/End: Complemental strand, 23278562 - 23278349
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||||| ||||   ||| ||||| || ||||| ||||| ||| || | |||||    
T  23278562 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatctggataatttcgtggttgtttttattgatgacattctgatttattc 23278463  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     ||  |||| || |||||| | || ||| ||| ||||||||||||| | |||||||||||  | || | |||||||||||| ||| | ||||| |||||     
T  23278462 taagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgtcgaagtgcgagttctggtta 23278363  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  23278362 agtgaagtgagttt 23278349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 24706259 - 24706371
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||  ||||||| |||||||| || || ||||| | |||    
T  24706259 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaaatgtgagttctggttgaaagaggtaagttttcttgg 24706358  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  24706359 ccatgttatttct 24706371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 266; Significance: 1e-148; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 132513 - 132878
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||     
T  132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtggtggtctttatagatgatattttagtgtattcgaag 132712  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    | |||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  132713 tttgaggaagagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 132812  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  132813 aagtgagtttccttggtcatgtgatttctatgggtggtatttctgtggatccttctaaggttgatg 132878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 177 - 376
Target Start/End: Complemental strand, 25942 - 25743
Alignment:
Q  177 ggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgt 276  Q
    |||||| ||||||||||||||||| |||||||| |||||||| || ||| |||||||||||||||||||||||||||  ||||| ||||||||  |||||    
T  25942 ggtgttcatagatgatattttggtatattcgaaatctgaggaagaacatgctgagcatttgaggattgtgttgcaagatttgaaggagaaccagctatgt 25843  T
Q  277 gctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    ||||||||  ||||| |||||||||||||| ||||||| ||||||  ||||||||||||||||| ||||||||||| |  |||||| |||||||||||||    
T  25842 gctaagtttcctaagtgtgagttttggttgcaggaagtaagtttcattggtcatgtgatttctaagggtggtatttatgtggatccgtctaaggttgatg 25743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 26049 - 25938
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||| ||||||||||| ||||||  ||    
T  26049 atcatccgattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaa 25950  T
Q  111 tgcgccaggtgt 122  Q
    ||||||||||||    
T  25949 tgcgccaggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 15291179 - 15291544
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||     
T  15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggaccattttgtggtggtgttcatagatgatattttggtgtattcaaag 15291378  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || || || |||||||||||| ||||||||||||||||||    
T  15291379 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 15291478  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||   |||||||| ||||||||||    
T  15291479 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtagatccttccaaggttgatg 15291544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 37 - 377
Target Start/End: Original strand, 12340912 - 12341252
Alignment:
Q  37 gatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaataca 136  Q
    |||||||||||||||| |||| ||||  || |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| |||||||| |    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
Q  137 tgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcattt 236  Q
    ||||||| ||||| ||||||| | ||||| ||||||||||  | ||||| |||||||| || |||||| |||| || |||||||||||| |||||||| |    
T  12341012 tgaataggatattccatccttttctggactgttttgtggtaatatttatcgatgatatcttcgtgtatacgaagtcagaggaggagcatgctgagcatct 12341111  T
Q  237 gaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatt 336  Q
    ||||||||||||||  |||||||| || ||  | || | | ||||| | || ||  |||||||||||||   |||||| ||||||| ||||||| |||||    
T  12341112 gaggattgtgttgcgtgtcttgaaggaaaagaagttgttttctaagctttcaaattgtgagttttggttacgggaagtaagtttccttggtcatatgatt 12341211  T
Q  337 tctacgggtggtatttctagggatccttctaaggttgatgt 377  Q
    |  | |||||||||| | | |||||| || | |||||||||    
T  12341212 ttgaagggtggtattgcgatggatccatcaatggttgatgt 12341252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 256 - 377
Target Start/End: Complemental strand, 14999321 - 14999200
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 355  Q
    ||||| ||||| || || |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |     
T  14999321 ttgaaggagaatcagttctgtgctaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttttg 14999222  T
Q  356 gggatccttctaaggttgatgt 377  Q
     ||||||||| |||||||||||    
T  14999221 tggatccttccaaggttgatgt 14999200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 370
Target Start/End: Complemental strand, 9292841 - 9292727
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 355  Q
    ||||| ||||| || |||||||| |||||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||||||     
T  9292841 ttgaaggagaatcagttatgtgcgaagttgtctaagtgtgagttttggttgaaggaaatgactttccttggtcatgtgatttctaagggtggtatttctg 9292742  T
Q  356 gggatccttctaagg 370  Q
     ||||||||| ||||    
T  9292741 tggatccttcaaagg 9292727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 340
Target Start/End: Complemental strand, 14696308 - 14696035
Alignment:
Q  67 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 166  Q
    |||||||| ||| | |||||  ||||||| ||||| ||  | |||||||||||||| |||||||| ||||||||    || |||||| | ||||||||      
T  14696308 tatggacattattaatattcagtgatgccttttggtgttacaaatgcgccaggtgtgtttatggagtacatgaactctatttttcatgcgtatttggatt 14696209  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | || ||||| ||||| || |||||||||||| | || ||||| || || || || ||| |||||||||||| |||||| ||||||||  ||||||||||    
T  14696208 gcttcgtggttgtgttcattgatgatattttgatatactcgaagtccgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaa 14696109  T
Q  267 ccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttcta 340  Q
      | |||| |||||||||||| ||| ||||||| |||||||| || |||||||| | ||| ||||| |||||||    
T  14696108 gaatttatatgctaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttatttcta 14696035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 64 - 306
Target Start/End: Original strand, 8322850 - 8323092
Alignment:
Q  64 aggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttgg 163  Q
    ||||||||||||||| | |||||  | ||||| |||||  |  |||||||| |||  || |||||||||||||  ||||  || |||||||| |||| ||    
T  8322850 aggtatggacactataaatattcggtaatgccgtttggtatgactaatgcgtcagacgtatttatggaatacacaaatatgatctttcatccctattcgg 8322949  T
Q  164 accgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
    | |  |||||||||||||| ||||| |||||||||||||||||||| |  |||||||||||| | |||||| |||| ||||| ||| |  ||||||| ||    
T  8322950 atcagtttgtggtggtgttcatagacgatattttggtgtattcgaagttggaggaggagcatgcagagcatctgagaattgtattggagatcttgaagga 8323049  T
Q  264 gaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    |||  |||| | |||||||||||| ||| |||| || ||||||    
T  8323050 gaagaaattgtatgctaagttgtcgaagtgtgatttctggttg 8323092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 14301888 - 14302049
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  14301888 tttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 14301987  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  14301988 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 14302049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 8708055 - 8707913
Alignment:
Q  118 ggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgagg 217  Q
    ||||| |||||||| |||||||||||||| || ||| |||||||||| || |||||||| |||||||| ||||| || ||| | ||||| || ||||| |    
T  8708055 ggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagtctgaag 8707956  T
Q  218 aggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
    | |||||| | ||||||| ||   ||||||||||||| |||||    
T  8707955 aagagcatgcagagcattagaaagttgtgttgcaagtgttgaa 8707913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 263
Target Start/End: Complemental strand, 15323372 - 15323216
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| ||||||||||||||||||||||| || ||| ||||| ||||    |||||||| |||||||| ||||||||| |  | |||||    
T  15323372 ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatattgtaatttattc 15323273  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
     ||   ||| || |||||| | |||||| |||  |||||||||||||| ||||||||    
T  15323272 taagagtgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaaga 15323216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 320
Target Start/End: Complemental strand, 40475178 - 40474982
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| || |||||| | || |||||| | | |||||| || |||||||| ||||| || |||||||||||| | || || ||  |||| || || |    
T  40475178 tttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgttcatcgatgatattttgatttactccaagactgaagaagaac 40475079  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    || |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||| ||| |||| || |||||||| |||||||||||    
T  40475078 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagtgagttt 40474982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 8051532 - 8051693
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  8051532 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 8051631  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  8051632 aaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 8051693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 23957850 - 23957689
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  23957850 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 23957751  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  23957750 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 23957689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 308
Target Start/End: Original strand, 14849225 - 14849424
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | |||||| || || ||||| ||||| || || ||||||||| | || || |    
T  14849225 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 14849324  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    | || || || || |||  ||||||||||| |||||| ||||||||  |||| |||||  | |||| |||||| ||||| ||| |||| || ||||||||    
T  14849325 agtccgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgctaaattgtcaaagtgtgaattctggttgaa 14849424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 3262911 - 3263064
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  3262911 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 3263010  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  3263011 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 3263064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 27713439 - 27713278
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  27713439 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 27713340  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  |  | | |||||| ||||||||| |||| || | |||||| |||||||||||    
T  27713339 aaagagaagaagctttatgctaaattgtctaagtgtgaattctagttgaaagaagtgagttt 27713278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 44659983 - 44660136
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| |||||||| ||||||||| |||| || ||| ||| | ||||    ||||| ||||||||||| || ||||||||  | |||||    
T  44659983 ctaacgcgcctggtgtatttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgacgatattttaatctattc 44660082  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| |||||||||||||| |||||    
T  44660083 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaa 44660136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 14682602 - 14682490
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| ||||||||||| | |||    
T  14682602 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttgg 14682503  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  14682502 ccatgttatttct 14682490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 51604909 - 51605141
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||||||| || | |||||    
T  51604909 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 51605008  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    |||  |||| || |||||| | || ||| |||| |||||| ||||||| |||||||||||  | || | ||| || ||||| ||  ||||||||||| |     
T  51605009 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 51605108  T
Q  307 aaggaagtgagtttccatggtcatgtgatttct 339  Q
    |  ||||||||||||| ||||||| | ||||||    
T  51605109 agtgaagtgagtttccttggtcatattatttct 51605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 8388447 - 8388336
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| || |||||||||| |||    
T  8388447 ctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaggtgagtttccttgg 8388348  T
Q  327 tcatgtgatttc 338  Q
     ||||| |||||    
T  8388347 ccatgttatttc 8388336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 339
Target Start/End: Original strand, 15145759 - 15145974
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || || ||  |||| || || |    
T  15145759 tttatggagtacatgaatcgtatctttcatgcatttttggatcgattcgtggttgtctttatcgatgatattttgatttactccaagactgaagaagaac 15145858  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || |||||||| |||  ||||| |||||||| ||||||||||   || | | |||||| || |||||| ||||||| |||||||| || || ||||| |     
T  15145859 atgctgagcatctgaacattgtcttgcaagtgttgaaagagaggaaactttatgctaaattatctaagtgtgagttctggttgaaagaggtaagttttct 15145958  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  15145959 tggccatgttatttct 15145974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 221
Target Start/End: Original strand, 18547696 - 18547850
Alignment:
Q  67 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 166  Q
    ||||| || |||||||||||  ||| ||| || ||| | ||||| |||||||| || |||||||| || ||||| ||||| || ||||| ||||| || |    
T  18547696 tatggtcattatgagtattcggtgaagcctttcggaatgtctaacgcgccaggagtgtttatggagtatatgaacagaatcttccatccgtatttagatc 18547795  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggagga 221  Q
      ||||| ||||| || || ||||||||||||||||| || || || ||||||||    
T  18547796 agtttgttgtggtattcattgatgatattttggtgtactctaaatcggaggagga 18547850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 263
Target Start/End: Complemental strand, 15072514 - 15072358
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| |||||||||||| | || ||| ||||| ||||    |||||||| |||||||| ||||||||  |  | |||||    
T  15072514 ctaatgcgcctggtgtgtttatggagtacatgaatagagttttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 15072415  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
     ||   |||  | |||||| | |||||| ||| ||||||||||||||| ||||||||    
T  15072414 taagaatgaataagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaga 15072358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 320
Target Start/End: Complemental strand, 12478633 - 12478542
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  12478633 gagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 12478542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 314
Target Start/End: Original strand, 18225423 - 18225510
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagt 314  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||    
T  18225423 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 18225510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 320
Target Start/End: Original strand, 19776772 - 19776863
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  19776772 gagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 19776863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 263
Target Start/End: Original strand, 15001482 - 15001638
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| | ||| |||||||| || |||||  |||| || ||| ||||| ||||    |||||||| |||||||| ||||| || ||| | |||||    
T  15001482 ctaatgcgcctgttgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 15001581  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
     ||   ||| || |||||| | || ||| ||||||||||||||||||| ||||||||    
T  15001582 taagattgaagaagagcatgcagaacatctgaggattgtgttgcaagtgttgaaaga 15001638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 264; Significance: 1e-147; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 5830 - 6197
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
Q  111 tgcgccaggtgtctttatggaa-tacatgaata-gaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcga 6029  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||    
T  6030 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 6129  T
Q  309 ggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| |  ||||||||| ||||||||||    
T  6130 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttttgtggatccttccaaggttgatg 6197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 14273 - 14173
Alignment:
Q  220 gagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtt 319  Q
    |||||| | |||||| ||| ||||||||||||| | |||||||| ||  | || | |||||||||||| ||| ||||||| ||||| |  ||||||||||    
T  14273 gagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagtt 14174  T
Q  320 t 320  Q
    |    
T  14173 t 14173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 7885 - 8250
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||     
T  7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttttggtggtgtttatagatgatattttagtgtattcgaag 8084  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    || ||||| ||||||  ||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  8085 tcggaggaagagcatgttgagcatctgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtctaagtgtgtgttttggttgaagg 8184  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| |||||||||||||||||  ||||||||| ||  |||||| |||||||||||||    
T  8185 aagtgagtttccttggtcatgtgatttctaatggtggtattgctgtggatccgtctaaggttgatg 8250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 34367 - 34002
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 34168  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||||| |||    
T  34167 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttgtctaagtgtgaattttggttggagg 34068  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||  |||||| |||||||||||||    
T  34067 aagtaagtttccttggtcatgtgatttctaagggtggtatttctgtggatccgtctaaggttgatg 34002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 262; Significance: 1e-146; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 24458 - 24093
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| || ||||||||||||||||||| ||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||| |||||||||| |||| || |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||     
T  24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtatattcgaaa 24259  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  24258 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagttttgaaggggaaccagttatgtgctaagttgtctaagtgtgagttttggttgcagg 24159  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  |||||| |||||||||||||    
T  24158 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccgtctaaggttgatg 24093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 339
Target Start/End: Complemental strand, 8189 - 7974
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||||||||| || || || |||||||||||| | || || |  ||||| || || |    
T  8189 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccatgtctgaagaagaac 8090  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || || ||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||||||| |||| || |||||||| |||||||| || |     
T  8089 atgctaagcatttgaagctagttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 7990  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  7989 tggacatgttatttct 7974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 259; Significance: 1e-144; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 11 - 377
Target Start/End: Original strand, 1976 - 2342
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||     
T  2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccattttgtggtggtgttaatagatgatattttggtgtattcaaag 2175  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||    
T  2176 tctgaggaagagcatgctgagcatttgaggattatgttgcaggtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttggagg 2275  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatgt 377  Q
    |||||||||||| |||||||||||||| || ||||||||||| |  |||||| ||||||||||||||    
T  2276 aagtgagtttccttggtcatgtgatttataagggtggtatttatgtggatccgtctaaggttgatgt 2342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 15 - 351
Target Start/End: Complemental strand, 26605 - 26270
Alignment:
Q  15 tcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcg 114  Q
    |||||| |||||||||||||||||||||||||| ||||  ||| |||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  26605 tcagatgagagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcg 26506  T
Q  115 ccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctg 214  Q
    ||||||||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||| |||||||  |||| |||||||||||||||||    |    
T  26505 ccaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtggtgatgtttatttatgacattttggtgtattcgaagatcg 26406  T
Q  215 aggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagt 314  Q
    ||||| |||||  |||||| ||||| |||||||||   ||||||||||| ||  | || |  |||||||| || ||| ||||||||||||||  ||||||    
T  26405 aggagtagcatgttgagca-ttgagaattgtgttgggtgtcttgaaagaaaagaagttgttagctaagttttcgaagtgtgagttttggttgcgggaagt 26307  T
Q  315 gagtttccatggtcatgtgatttctacgggtggtatt 351  Q
    || ||||| ||||||||||||||| |  |||||||||    
T  26306 gactttccttggtcatgtgatttcgaaaggtggtatt 26270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 6953 - 7318
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||| || || || ||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||| |||     
T  7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgttttatggtggtgtttataaatgatattttggtgtatttgaag 7152  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||    
T  7153 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcagg 7252  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||  |||||| |||||||||||||    
T  7253 aagtgagtttccttggtcatatgatttctaagggtggtatttctgtggatccgtctaaggttgatg 7318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 250; Significance: 1e-139; HSPs: 2)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 970 - 1335
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||| ||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||     
T  1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgttttatggtggtgtttatagatgatattttggtgtattcgaag 1169  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||| |||| ||     
T  1170 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtcttgaaggagaaccaattatgtgctaaattgtcgaagtgtgagttttagttgcaga 1269  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| | ||||||||||||||| ||||||||||| |  |||||| || ||||||||||    
T  1270 aagtgagtttcctttgtcatgtgatttctaagggtggtatttttgtggatccgtcgaaggttgatg 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 376
Target Start/End: Complemental strand, 4571 - 4451
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 355  Q
    ||||| ||||| || || |||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||| ||||| ||||| |     
T  4571 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtgttatttatt 4472  T
Q  356 gggatccttctaaggttgatg 376  Q
     ||||||||||||||||||||    
T  4471 tggatccttctaaggttgatg 4451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 249; Significance: 1e-138; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 11 - 371
Target Start/End: Original strand, 8850 - 9210
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||| || || ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8850 atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8949  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||| ||     
T  8950 tgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatcgttttgtgatggtgttcatagatgatattttggtgtattcaaag 9049  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||| |||||| |||||| ||||||||||||||||||    
T  9050 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaactagttatgtgttaagttatctaagtgtgagttttggttgaagg 9149  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggt 371  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| |||||    
T  9150 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggt 9210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 337
Target Start/End: Complemental strand, 40711 - 40588
Alignment:
Q  214 gaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaag 313  Q
    ||||| || ||| |||||||||||| || ||| |||||||| |||||||||||  || | | |||||| || |||||| |||| || |||||||| || |    
T  40711 gaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagagg 40612  T
Q  314 tgagtttccatggtcatgtgattt 337  Q
    ||||||| | ||| ||||| ||||    
T  40611 tgagttttcttggccatgttattt 40588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 337
Target Start/End: Complemental strand, 74431 - 74308
Alignment:
Q  214 gaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaag 313  Q
    ||||| || ||| |||||||||||| || ||| |||||||| |||||||||||  || | | |||||| || |||||| |||| || |||||||| || |    
T  74431 gaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagagg 74332  T
Q  314 tgagtttccatggtcatgtgattt 337  Q
    ||||||| | ||| ||||| ||||    
T  74331 tgagttttcttggccatgttattt 74308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 827 - 1168
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| ||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||     
T  927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggaccattttgtggtggtgtttatagatgata-tttggtgtattcgaag 1025  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||| ||||||||| |||    
T  1026 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtcgaagtgtgaattttggttgcagg 1125  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttc 353  Q
    |||||||||||| |||||| |||||||| | ||| ||||||||    
T  1126 aagtgagtttccttggtcacgtgatttcgaagggaggtatttc 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 16340 - 15998
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||| |||||| |||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||     
T  16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtggtgatgtttatagatgatattttggtgtattcgaag 16141  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| || | |||| ||||||||| |||    
T  16140 tctgaggaggagcatgttgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtttacgtgtgaattttggttgcagg 16041  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttc 353  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  16040 aagtgagtttccctggtcatgtgatttctaagggtggtatttc 15998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 238; Significance: 1e-131; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 1908 - 2264
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||| ||||| || |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||     
T  2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtggtggtgttcatagatgatattttggtgtattcgaaa 2107  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||          ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||  ||    
T  2108 tctgagga---------cgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttgtctaagtgtgagttttggttgcggg 2198  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  |||||| |||||||||||||    
T  2199 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccgtctaaggttgatg 2264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 218; Significance: 1e-120; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 31447 - 31811
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| | |||||||||||  |||||| ||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||     
T  31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaag 31646  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    | |||||| |||||| |||||||||||||||||||  ||| | ||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||  ||    
T  31647 tttgaggaagagcatgctgagcatttgaggattgt-atgcgaatcttgaacgagaaccagttatgtgctaagttgtcgaagtgtgagttttggttgcggg 31745  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    |||||||||||| ||||||||||||||||| ||||||||||||   |||||| || ||||||||||    
T  31746 aagtgagtttccttggtcatgtgatttctaagggtggtatttccgtggatccgtcgaaggttgatg 31811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 69 - 376
Target Start/End: Complemental strand, 7438 - 7131
Alignment:
Q  69 tggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgt 168  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| || ||||||| |||||||||||||||| || |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||||| ||| ||||||||||||||||| |||||||| |||||||||||||||  ||||||| |||||||||||||| ||||||| ||||||||||    
T  7338 tttgtggtggagttcatagatgatattttggtatattcgaaatctgaggaggagcatgttgagcatatgaggattgtgttgtaagtcttaaaagagaacc 7239  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaa 368  Q
    | ||||||||||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||||| |  |||||| |||||    
T  7238 agttatgtgctaagttgtctaagtgtgagttttggttgcaggaagtgagtttcctgggtcatgtgatttctaagggtggtatttatgtggatccgtctaa 7139  T
Q  369 ggttgatg 376  Q
    ||| ||||    
T  7138 ggtcgatg 7131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 11 - 306
Target Start/End: Original strand, 21871 - 22165
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| | |||||||||||  |||||| ||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||     
T  21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaag 22070  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    | |||||| |||||| |||||||||||||||||||  ||| | ||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||    
T  22071 tttgaggaagagcatgctgagcatttgaggattgt-atgcgaatcttgaacgagaaccagttatgtgctaagttgtcgaagtgtgagttttggttg 22165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 7029 - 7361
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    ||||||| |||||||||||||||||||||||||||||||| | ||||  |||||||||||||||||||| ||||||| ||||||||||||||||||| ||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaa 7228  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||||||||||||| ||||||||||     ||||| | | ||||||||| ||||| || ||||||| |||||||||||||  ||||||||||||  |||    
T  7229 tctgaggaggagcatgctgagcattt----tttgtgctacgagtcttgaaggagaatcagttatgtgttaagttgtctaagtttgagttttggttatagg 7324  T
Q  311 aagtgagtttccatggtcatgtgatttctacgggtgg 347  Q
    |||||||||||| ||||||||||||||| | ||||||    
T  7325 aagtgagtttccttggtcatgtgatttcgaagggtgg 7361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 1645 - 1888
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||| |||| ||||||||| |||||||||||||  | |||||||||||||| || ||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 1844  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  1845 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 1888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 378 - 103
Alignment:
Q  22 agagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtg 121  Q
    ||||||||||||||| |||||||||||| || |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  378 agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 279  T
Q  122 tctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggagga 221  Q
    |||| || || || |||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||    
T  278 tcttcatagagtatatgaatagaatatttcatccttatctgtactgttttgtggtggtgtttatagatgatattttggggtatttgaaatctgaggaaga 179  T
Q  222 gcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgag 297  Q
    |||| ||||||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||| |||||    
T  178 gcatgctgagcatttgaggattatgttgcaagtcttgaaggagaactagttatgtgctaagttgtctaagtgtgag 103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||| |||||||||||||||| ||||||   |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatt 149  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 335
Target Start/End: Complemental strand, 9129 - 8853
Alignment:
Q  59 gaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctta 158  Q
    ||||||||||||| |||||||| || | | ||||| ||||||| ||  |||||||||  |||||||| |||||||||||||||||||| || ||||||||    
T  9129 gaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctta 9030  T
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| |  ||| |||||||||||||||| ||||| ||| |||||||||| || |||||||||||| | |||||| | ||||||||||||||    |||    
T  9029 tttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattgtgttgcatactttg 8930  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgat 335  Q
    ||||||||  | || | || ||||||||| ||| ||||||||| ||||  |||||||||||||| ||||||||||||    
T  8929 aaagagaataagttgtttgataagttgtcaaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtgat 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 234 - 376
Target Start/End: Complemental strand, 2323 - 2181
Alignment:
Q  234 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtg 333  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||     
T  2323 tttgaggattgtgttgcaagccttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagttttcttggtcatgtt 2224  T
Q  334 atttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    ||||||| |||||||||||||  ||||||||||||||||||||    
T  2223 atttctaagggtggtatttctgtggatccttctaaggttgatg 2181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 234 - 376
Target Start/End: Original strand, 25024 - 25166
Alignment:
Q  234 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtg 333  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  25024 tttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgcaaagttatctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtg 25123  T
Q  334 atttctacgggtggtatttctagggatccttctaaggttgatg 376  Q
    ||||||| |||||||||||||  ||||||||||||||||||||    
T  25124 atttctaagggtggtatttctgtggatccttctaaggttgatg 25166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
Q  111 tgcgc 115  Q
    |||||    
T  2121 tgcgc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 255 - 376
Target Start/End: Complemental strand, 212 - 91
Alignment:
Q  255 cttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttct 354  Q
    |||||| ||||| || || ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||| |    
T  212 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaaaggtggtatttat 113  T
Q  355 agggatccttctaaggttgatg 376  Q
      ||||||||||||||||||||    
T  112 gtggatccttctaaggttgatg 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 74; Significance: 7e-34; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 255 - 376
Target Start/End: Original strand, 54210 - 54331
Alignment:
Q  255 cttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttct 354  Q
    |||||| ||||| || || ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||| |    
T  54210 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaatggtggtattttt 54309  T
Q  355 agggatccttctaaggttgatg 376  Q
      ||||||||||||||||||||    
T  54310 gtggatccttctaaggttgatg 54331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 340
Target Start/End: Original strand, 2636 - 2858
Alignment:
Q  118 ggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgagg 217  Q
    ||||| |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || || || |||||||||||| | || || || |||||||    
T  2636 ggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactccaagtctgagg 2735  T
Q  218 aggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgag 317  Q
    | || ||| |||||||||||| || |   |||||||| |||||||||||  || | | |||||| || || ||| |||| || |||||||| ||  ||||    
T  2736 aagaacatgctgagcatttgaagactagtttgcaagtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaattctggttgaaagagatgag 2835  T
Q  318 tttccatggtcatgtgatttcta 340  Q
    ||| | ||| ||||| |||||||    
T  2836 ttttcttggccatgttatttcta 2858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 266
Target Start/End: Complemental strand, 151279 - 151137
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| ||| |||||||  | || || || ||||| || || |    
T  151279 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgataatattttaatttactccaagtctgaagaagaac 151180  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    || |||||||||||| | | ||||||||||| |||||||||||    
T  151179 atgctgagcatttgaagctggtgttgcaagtgttgaaagagaa 151137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 181941 - 181840
Alignment:
Q  276 tgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgat 375  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |  |||||||||||||||||||    
T  181941 tgctaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtggatccttctaaggttgat 181842  T
Q  376 gt 377  Q
    ||    
T  181841 gt 181840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 109 - 340
Target Start/End: Original strand, 24655 - 24886
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| ||||| || |||||||||||| | || ||||    
T  24655 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggaacgtttcgtggttgtgttcatcgatgatattttgatatactcga 24754  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  |||| || || ||| |||||||||||| |||||| |||||||| |||||||||||  | |||| |||||| || || ||| |||| || ||||||||    
T  24755 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgctaaattatcaaagtgtgaattctggttgaa 24854  T
Q  309 ggaagtgagtttccatggtcatgtgatttcta 340  Q
     || || ||||| | ||| ||||| |||||||    
T  24855 agaggtaagttttcttggccatgttatttcta 24886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 256 - 376
Target Start/End: Original strand, 13093 - 13213
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 355  Q
    ||||| ||||| || || |||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||  |||||||||||||     
T  13093 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttcttagggtggtatttctg 13192  T
Q  356 gggatccttctaaggttgatg 376  Q
     ||||||||||||||||||||    
T  13193 tggatccttctaaggttgatg 13213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 374
Target Start/End: Original strand, 10979 - 11097
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 355  Q
    ||||| || ||||| ||||||||||||||||||||| | || ||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||| |     
T  10979 ttgaaggaaaaccagttatgtgctaagttgtctaagtgcgaattttggttgaagggagtgattttccttggtcatgtgatttctaagggtggtatttatg 11078  T
Q  356 gggatccttctaaggttga 374  Q
     ||||||||||||||||||    
T  11079 tggatccttctaaggttga 11097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 3085 - 2853
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    ||||||| || ||||| |||||||||||||||||| | || |||||| |||||||||| ||||| ||||| ||||| || |||||||||||| | || ||    
T  3085 ctaatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttggatcgtttcgtggttgtgttcatcgatgatattttgatataatc 2986  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     || ||||| || || ||| |||| ||||||| |||| | ||||||||  ||||||||||  | |||| |||| | ||||| ||| |||| || ||||||    
T  2985 taagtctgaagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagagaagaagttatatgctcaattgtcaaagtgtgaattctggttg 2886  T
Q  307 aaggaagtgagtttccatggtcatgtgatttct 339  Q
    || || |||||||||| ||| ||| | ||||||    
T  2885 aatgaggtgagtttccgtggccatattatttct 2853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 118 - 338
Target Start/End: Complemental strand, 14643 - 14423
Alignment:
Q  118 ggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgagg 217  Q
    ||||| |||||||||||||||||| |||| |||||| | | |||||| ||||| ||||| ||||| || || ||||||||| | || ||||| || || |    
T  14643 ggtgtgtttatggaatacatgaatcgaatttttcatgcgtttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactcgaagtccgaag 14544  T
Q  218 aggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgag 317  Q
    | |||||| |||||||||||| |||||| ||||||||  ||||||||||  |  ||| | |||| ||||| ||| ||||||| |||||||| || || ||    
T  14543 aagagcatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatattctaaattgtcaaagtgtgagttctggttgaatgaggttag 14444  T
Q  318 tttccatggtcatgtgatttc 338  Q
    ||| | ||| ||||| |||||    
T  14443 ttttcttggccatgttatttc 14423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 9114 - 9386
Alignment:
Q  67 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 166  Q
    |||||||| ||||| |||||  ||||||| || || ||  | |||||||||||||| |||||||| ||||||||| | || |||||| | ||||| || |    
T  9114 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatc 9213  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||| ||||| ||||| || |||||||||||| | || || || ||||| || || |||  |||||||||||||||||| ||||||||  |||| |||||    
T  9214 gtttcgtggttgtgttcatggatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaggattgttttgcaagtgctgaaggagaa 9313  T
Q  267 ccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
      | |||| ||| ||| |||| ||| |||| || |||||| | || |||||||| | ||| ||||| ||||||    
T  9314 gaagttatatgccaagctgtcaaagtgtgaattctggttggatgaggtgagttttcttggccatgttatttct 9386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 339
Target Start/End: Original strand, 11411 - 11591
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || || |||||||||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  11411 tttggatcggttcgtggtggtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttg 11510  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    ||||||||  |||| | |||||| ||||||||| |||| || |||||||||||||| ||||| | ||| ||||| ||||||    
T  11511 aaagagaagaaattttatgctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttggccatgttatttct 11591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 320
Target Start/End: Complemental strand, 495202 - 494991
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| ||||| || ||||||||| | || |||||| | | |||||| ||||||||||| ||||| || || ||||||||| | || ||||    
T  495202 aatgcgccaggtgtgtttattgagtacatgaatcgtatttttcatgcgtttttggatcgttttgtggttgtgttcatcgacgatattttgatatactcga 495103  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    | ||||| || || ||| ||||| |||||| |||||| ||||||||  ||||||||||  |  ||| |||||| ||||| |||  |||||| ||||||||    
T  495102 agtctgaagaagaacatgctgagtatttgaagattgttttgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtctgagttctggttgaa 495003  T
Q  309 ggaagtgagttt 320  Q
     || ||||||||    
T  495002 tgaggtgagttt 494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 4847 - 4785
Alignment:
Q  33 ggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgcc 95  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  4847 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 350
Target Start/End: Original strand, 46682 - 46776
Alignment:
Q  256 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtat 350  Q
    ||||| ||||| ||||| |||||||||||||||||| |||| |||||||||  |||||||||||||| ||||||||||||||||| | |||||||    
T  46682 ttgaaggagaatcaattgtgtgctaagttgtctaagtgtgaattttggttgcgggaagtgagtttccttggtcatgtgatttctaagagtggtat 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 5295 - 5066
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| || ||| | ||||||||| | || |||||| | |||||||| || |||||||| ||||| || || ||||||||| | || || |    
T  5295 aatgcgccaggtgtgttcatg-agtacatgaatcgtatttttcatgcgtatttggatcgctttgtggttgtgttcattgacgatattttgatatactcca 5197  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  |||| || || ||| |||||||||||| |||||| ||||||||  ||||||||||  | |||| ||| |||||||| ||| ||||||| ||||||||    
T  5196 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgcaaagttgtcaaagtgtgagttctggttgaa 5097  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || |||||||| | ||| ||||| ||||||    
T  5096 tgaggtgagttttcttggccatgttatttct 5066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 76 - 376
Target Start/End: Original strand, 27337 - 27636
Alignment:
Q  76 tatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtgg 175  Q
    ||||| |||||| ||||||| || || ||  |||||||||| || || ||| ||||||| |||||| | || |||||| ||||| | || |||||||| |    
T  27337 tatgaatattctgtgatgcctttcggtgttactaatgcgccgggagtatttgtggaatatatgaatcgtatttttcatacttatctagatcgttttgttg 27436  T
Q  176 tggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatg 275  Q
    | |||||||||||||||||  || | || || || ||||||||||| ||| | ||||||||||| ||||| ||||||||  ||||||||||  | ||||     
T  27437 ttgtgtttatagatgatatcctgatatactctaagtctgaggaggaacatgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttata 27536  T
Q  276 tgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgat 375  Q
    ||| ||||| || ||| | || || |||||||| | ||||||||| | ||||||| | ||||||    ||||||||  |  |||||| ||||||||||||    
T  27537 tgccaagttatcaaagtgagaattctggttgaacg-agtgagttttcttggtcatattatttctggtagtggtattgttgtggatccatctaaggttgat 27635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 76571 - 76482
Alignment:
Q  145 atatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcat 234  Q
    ||||| ||||||||| ||||||  ||| |||| ||||||||||| ||||| ||||||||||| || || ||||||||||||  |||||||    
T  76571 atattccatccttatctggaccagtttttggtagtgtttatagacgatatcttggtgtattcaaagtcagaggaggagcatgttgagcat 76482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 124 - 330
Target Start/End: Original strand, 84656 - 84862
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    ||||||||||| |||||| | || |||||| ||||| | || |||||||| || |||||||||||||||||| || | || || ||  |  |||||||||    
T  84656 tttatggaatatatgaatcgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatattatgatatactctaagaccaaggaggagc 84755  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || | ||||||||||| ||||| ||||||||  ||||||||||  | |||| ||| ||||| || ||| | || || ||||||||  ||||||||||||     
T  84756 atgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcaaagtgcgaattctggttgaacaaagtgagtttcct 84855  T
Q  324 tggtcat 330  Q
    |||||||    
T  84856 tggtcat 84862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 9072 - 8911
Alignment:
Q  159 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  9072 tttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 8973  T
Q  259 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  8972 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 8911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 176464 - 176617
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| |||||||||| || ||||| || || ||||| ||||| || ||| | |||||    
T  176464 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgttgttgtatttattgatgacatcttgatttattc 176563  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     || ||||| || |||||| | |||||||| | |||||||||| |||| |||||    
T  176564 taagtctgaagaagagcatgcagagcatttaaagattgtgttgtaagtgttgaa 176617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 339
Target Start/End: Complemental strand, 3601 - 3386
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||||||||| || || || |||||||||||| | || || || ||||| || || |    
T  3601 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccaactctgaagaagaac 3502  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || |||||||||||| | | || |||||| | |||||||||||  || | | |||||| || |||||| |||| || |||||||| ||||||||||| |     
T  3501 atgctgagcatttgaagctggttttgcaattgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaagtgagttttct 3402  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  3401 tggccatgttatttct 3386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 320
Target Start/End: Complemental strand, 4094 - 3887
Alignment:
Q  113 cgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattc 212  Q
    |||||||||| |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| ||||| || || ||||||||| | || || ||  |    
T  4094 cgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactccaagac 3995  T
Q  213 tgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaa 312  Q
    ||| || || ||| |||||||||||| |||||| ||||||||  ||||||||||  |  ||| |||||| ||||| ||| |||| || |||||||| ||     
T  3994 tgaagaagaacatgctgagcatttgaagattgtattgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtgtgaattctggttgaaagag 3895  T
Q  313 gtgagttt 320  Q
    ||||||||    
T  3894 gtgagttt 3887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 40453 - 40606
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  40453 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 40552  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  40553 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 40606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 260
Target Start/End: Original strand, 201594 - 201741
Alignment:
Q  113 cgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattc 212  Q
    |||| ||||| |||||||| |||||||||||||| || ||| |||||||||| || |||||||| |||||||| |||||||||||| | || || ||  |    
T  201594 cgccgggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgtggttgtgtttattgatgatattttgatatactctaagac 201693  T
Q  213 tgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
    ||| || || ||| | || ||||||| | ||||||||||||| |||||    
T  201694 tgaagaagaacatgcagaacatttgaaggttgtgttgcaagtgttgaa 201741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 263
Target Start/End: Complemental strand, 11012 - 10858
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| |||||||| |||||||||||||| || ||| |||||||||| |  ||||| || |||||||| ||||| || ||| | ||||| |    
T  11012 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcaatttgtagttgtgtttattgatgacatcttgatttattcta 10913  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
    |  |||| || |||||| | |||||||| | |||||| |||||||| ||||||||    
T  10912 agactgaagaagagcatacagagcatttaaagattgtattgcaagtgttgaaaga 10858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 7209 - 7439
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||| || ||||| |||||||| ||||||||| |||| |||||| | | |||||| |||||  |||| || || || ||||| |||||||| || || |    
T  7209 aatgcacctggtgtgtttatggagtacatgaatcgaatctttcatgcatttttggatcgtttcatggttgtattcatcgatgacattttggtttactcca 7308  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  |||| || || ||| |||||||||||| || ||| |||||||| |||||||||||  || | | |||||| ||||| ||| |||| || ||||||||    
T  7309 agactgaagaagaacatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaattctggttgaa 7408  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || |||||||| | ||| ||||| ||||||    
T  7409 tgaggtgagttttcttggccatgttatttct 7439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 266
Target Start/End: Complemental strand, 17061 - 16904
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | ||||| || || || ||||| ||||| || || ||||||||| | || || |    
T  17061 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 16962  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |  |||| || || ||| |||||||||||| |||||| |||||||| |||||||||||    
T  16961 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaa 16904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 1969 - 2201
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| ||||||||| | || |||||| | ||||| || || ||  |||| ||||| || |||||||||||| | || ||    
T  1969 ctaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactc 2068  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     || ||| | || || |||  ||||||||||| |||||| ||||||||  |||| |||||  | |||  ||| |||||||| ||| |||| || ||||||    
T  2069 taagtctcaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttaaatgccaagttgtcaaagtgtgaattctggttg 2168  T
Q  307 aaggaagtgagtttccatggtcatgtgatttct 339  Q
    || || |||||||| | ||||||||| ||||||    
T  2169 aatgaggtgagttttcttggtcatgttatttct 2201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 112 - 339
Target Start/End: Original strand, 6014 - 6241
Alignment:
Q  112 gcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaatt 211  Q
    ||||||||||| |||||||| ||||||||| | || || ||| | ||| | || ||||| ||||| ||||| || || ||||||||| | || || ||      
T  6014 gcgccaggtgtgtttatggagtacatgaatcgtattttccatgcatatctagatcgtttcgtggttgtgttcatcgacgatattttgatatactctaagg 6113  T
Q  212 ctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagga 311  Q
    |||| || || ||| ||||||| |||| |||||| ||||||||  ||||||||||  | |||| |||||||||||| ||| |||| || |||||||| ||    
T  6114 ctgaagaagaacatgctgagcaattgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatga 6213  T
Q  312 agtgagtttccatggtcatgtgatttct 339  Q
     || | ||| | ||||||||| ||||||    
T  6214 ggtcatttttcttggtcatgttatttct 6241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 6e-16; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 374
Target Start/End: Complemental strand, 17002 - 16855
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||  ||||||||||||| |||    
T  17002 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgagagaagtgagtttccttgg 16903  T
Q  327 tcatgtgatttctacgggtggtatttctagggatccttctaaggttga 374  Q
     ||||| |||||||  | ||||||| ||  |||||| ||||| |||||    
T  16902 ccatgttatttctagtgatggtattgctgtggatccatctaaagttga 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 372
Target Start/End: Original strand, 104892 - 104958
Alignment:
Q  306 gaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggtt 372  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||| |  |||||| |||||||||    
T  104892 gaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtggatccgtctaaggtt 104958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 374
Target Start/End: Complemental strand, 10540 - 10393
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| | | |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||  ||||||||||||| |||    
T  10540 ctgagcatctaaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgagagaagtgagtttccttgg 10441  T
Q  327 tcatgtgatttctacgggtggtatttctagggatccttctaaggttga 374  Q
     ||||| |||||||  | ||||||| ||  |||||| ||||| |||||    
T  10440 ccatgttatttctagtgatggtattgctgtggatccatctaaagttga 10393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 48634 - 48847
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  48634 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 48733  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    ||   ||||||| |||||| | || ||| |||||||||| |||||||| |||||||||||  | || | ||| || ||||| ||| | |||||||||||     
T  48734 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 48833  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  48834 agtgaagtgagttt 48847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 94051 - 94093
Alignment:
Q  268 caattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  94051 caattgtgtgctaagttgtctaagtgtgagttttggttgaagg 94093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 45266 - 45106
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    ||||| || |||||||||||| | || || ||  |||| || || ||| |||| ||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  45266 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgatcatctgaagattgtcttgcaagtattgaaagagaaaaaactttatg 45167  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    | || ||||||||| |||| || |||||||| || |||||||| | ||| ||||| |||||    
T  45166 ccaaattgtctaagtgtgaattctggttgaaagaggtgagttttcttggccatgttatttc 45106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 189 - 419
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||| || ||||| || ||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || || || ||||| |||||| | || || |    
T  189 aatgcacctggtgtgttgatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgttttcattgatgacattttgatttactcca 288  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  ||||||| || ||| |||||||||||| || |||||||||||| |||||||||||  |  | | |||||| ||||| ||| |||| || ||||||||    
T  289 agactgaggaagaacatgctgagcatttgaagactgtgttgcaagtgttgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaa 388  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || |||||||| | ||| ||||| ||||||    
T  389 tgaggtgagttttcttggccatgttatttct 419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 15343 - 15573
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||| |||||||||| ||||||||| | || |||||| | | |||||| ||||| ||| | ||||| || || ||||||||| | || || |    
T  15343 aatgcgccaggtatctttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtgattgtgttcatcgacgatattttgatatactcca 15442  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  |||| || || ||  |||||||||||| |||||| ||||||||  | ||||||||  | |||| |||||| ||||| ||| |||| || | ||||||    
T  15443 agactgaagaagaacaagctgagcatttgaagattgttttgcaagtgctaaaagagaaaaagttatatgctaaattgtcaaagtgtgaattctagttgaa 15542  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || |||||||| | ||| ||||| ||||||    
T  15543 agaggtgagttttcttggccatgtaatttct 15573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 14601 - 14831
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | ||||||  |||| ||||| ||||| || || ||||||||| | || || |    
T  14601 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatagtttcgtggttgtgttcatcgacgatattttgatatactcca 14700  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |   ||| || || |||  ||||||||||| |||||| ||||||||  ||||||||||  | |||| |||||| ||||| ||| |||| || | ||||||    
T  14701 agattgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgaattctagttgaa 14800  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     || |||||||| | ||| ||||| ||||||    
T  14801 agaggtgagttttcttggccatgttatttct 14831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 10863 - 11093
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||| ||| ||||| | || |||||| | ||||| || || ||  |||| ||||| || |||||||||||| | || || |    
T  10863 aatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactcta 10962  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  |||| || || ||| ||||||||||||||||||| ||||||||  |||| |||||  |  | | |||||||||||| ||| ||||  | ||||||||    
T  10963 agactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaa 11062  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     ||||| ||||| | ||| ||||| ||||||    
T  11063 tgaagtaagttttcttggccatgttatttct 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 17055 - 17285
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||| ||| ||||| | || |||||| | ||||| || || ||  |||| ||||| || |||||||||||| | || || |    
T  17055 aatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactcta 17154  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |  |||| || || ||| ||||||||||||||||||| ||||||||  |||| |||||  |  | | |||||||||||| ||| ||||  | ||||||||    
T  17155 agactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaa 17254  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     ||||| ||||| | ||| ||||| ||||||    
T  17255 tgaagtaagttttcttggccatgttatttct 17285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 320
Target Start/End: Original strand, 24542 - 24631
Alignment:
Q  231 gcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    |||||||| |||||| ||||||||  ||||||||||  | |||| |||||||||||| ||  |||| || |||||||| || ||||||||    
T  24542 gcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaaatgtgaattctggttgaatgaggtgagttt 24631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 266
Target Start/End: Complemental strand, 6055 - 5898
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||||||||||||| | ||  ||||  | | ||| || || || ||||| ||||| || |||||||||||| | || ||||    
T  6055 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 5956  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | || || || || ||| |||||||||||| |||||| || ||||| |||||||||||    
T  5955 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaa 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 266
Target Start/End: Complemental strand, 13185 - 13028
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||||||||||||| | ||  ||||  | | ||| || || || ||||| ||||| || |||||||||||| | || ||||    
T  13185 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 13086  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | || || || || ||| |||||||||||| |||||| || ||||| |||||||||||    
T  13085 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaa 13028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 115172 - 115333
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    ||||| || |||||||||||| | || || || ||||| || || ||| |||||||||||| |||||| ||||||||  |||| |||||  | |||| ||    
T  115172 gtgttcatcgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagtagttatatg 115271  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    | |||||||| ||| |||| ||||||||||| || |||||||| | ||| ||||| ||||||    
T  115272 ccaagttgtcaaagtgtgaattttggttgaaagaggtgagttttcttggccatgttatttct 115333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 107 - 320
Target Start/End: Complemental strand, 114745 - 114532
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || |||||||| ||||||||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  114745 ctaatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 114646  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     |   ||||||| |||||| | || ||| ||| |||||| |||||||| |||||||||||  |||| | ||| || ||||| ||| | ||||| |||||     
T  114645 aagaactgaggaagagcatgcagaacatctgatgattgtattgcaagtattgaaagagaagaaattgtatgccaaattgtcgaagtgcgagttctggtta 114546  T
Q  307 aaggaagtgagttt 320  Q
    || |||||||||||    
T  114545 aatgaagtgagttt 114532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 108041 - 108163
Alignment:
Q  217 gaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtga 316  Q
    ||||| ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| || || |    
T  108041 gaggaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaggtaa 108140  T
Q  317 gtttccatggtcatgtgatttct 339  Q
    |||| | ||| ||||| ||||||    
T  108141 gttttcttggccatgttatttct 108163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 121 - 353
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||||||||| |||||| ||||| ||||    |||||||| ||||  || ||||| |||||| | |||||    
T  121 ctaatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctggataaatttgtggtagtgtacattgatgacattttgatctattc 220  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
    ||   | ||||| |||||| | || ||| |||| |||||||||||||| |||||||||||  | || | ||| || ||||| ||| ||||||| |||||     
T  221 gacaacggaggaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 320  T
Q  307 aaggaagtgagtttccatggtcatgtgatttct 339  Q
    |  ||||| ||||||| ||| ||| | ||||||    
T  321 agtgaagtaagtttccttggccatattatttct 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 263
Target Start/End: Original strand, 5209 - 5365
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||| ||||    |||||||| |||||||| ||||||||  |  | |||||    
T  5209 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 5308  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
     ||   ||| || |||||| | |||||| ||| ||||||||||||||| ||||||||    
T  5309 taagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaga 5365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 9432 - 9320
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | |||    
T  9432 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttgg 9333  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  9332 ccatgttatttct 9320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 263
Target Start/End: Complemental strand, 8541 - 8402
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || ||||| |||||||||||| | || || || ||| |||| || |    
T  8541 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgtttttatcgatgatattttgatttactccaagtctaaggaagaac 8442  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
    ||||||||||||||| | | || |||||||| ||||||||    
T  8441 attctgagcatttgaagctggttttgcaagtgttgaaaga 8402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 31501 - 31652
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||||||||||| ||||||||| || | ||||| ||  |||| ||||||||| | |||||| ||| |||| | ||||||||||||||||| ||      
T  31501 tttgtggtggtgtttattgatgatattctgatttattctaagactgaagaggagcatgcagagcatctgaagattatattgcaagtcttgaaagaaaaga 31600  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    | || | ||| ||| |||| ||| ||||||| ||||| |  |||||||||||    
T  31601 agttgtatgcaaagctgtcaaagtgtgagttctggttaagtgaagtgagttt 31652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 339
Target Start/End: Original strand, 38085 - 38300
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || || || |||||||||||| | || |  || ||||| || || |    
T  38085 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgttttcattgatgatattttgatttactacaagtctgaagaagaac 38184  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || |||||||||||| | | || |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||| || |     
T  38185 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 38284  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  38285 tggacatgttatttct 38300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 103459 - 103260
Alignment:
Q  67 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 166  Q
    ||||||||||||||||||    ||||||| || || ||  | |||||||||||||| |||||||| | ||||||| | || |||||| | | |||||| |    
T  103459 tatggacactatgagtataaagtgatgcctttcggtgttgcaaatgcgccaggtgtgtttatggagtgcatgaatcgcatttttcatgcatttttggatc 103360  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||| ||||| || || || |||||||||||| | || || || |||||||| || ||| | || ||||||| || ||| ||||||||  ||||||||||    
T  103359 gtttcgtggtagtattcatcgatgatattttgatttactccaagtctgaggaagaacatgccgaacatttgaagactgttttgcaagtgctgaaagagaa 103260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  11 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtat 69  Q
    |||||||||||| |||||||||  |||||||||||||||||| |||| |||||||||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 950 - 720
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| || || |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || |  |    
T  950 aatgcgcctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgatgatattttgatttacttca 851  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    | ||||| || || ||| |||||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||||||| |||| || ||||||||    
T  850 agtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaacctttatgcgaaattgtctaagggtgaattctggttgaa 751  T
Q  309 ggaagtgagtttccatggtcatgtgatttct 339  Q
     |||||||| || | ||| ||||| ||||||    
T  750 agaagtgagctttcttggacatgttatttct 720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 337
Target Start/End: Complemental strand, 22887 - 22661
Alignment:
Q  111 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 210  Q
    |||||||||||| |||||||| ||||||||| | || |||||| | |||||||| |  || ||||| ||||| ||  ||||||||||| | || || ||     
T  22887 tgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatcacttcgtggttgtgttcatcaatgatattttgatatactctaag 22788  T
Q  211 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 310  Q
    ||||| || || ||  |||||||||||| |||||| ||||||||   ||| || ||  | |||| ||| |||||||| ||| ||||||| |||||||| |    
T  22787 tctgaagaagaacacactgagcatttgaagattgttttgcaagtgccgaaggaaaagaagttatatgccaagttgtcaaagtgtgagttctggttgaatg 22688  T
Q  311 aagtgagtttccatggtcatgtgattt 337  Q
    | || ||||| | ||| ||||| ||||    
T  22687 aggtaagttttcttggccatgttattt 22661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 38060 - 38172
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| ||||||| |||||||| || || ||||| | |||    
T  38060 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggtaagttttcttgg 38159  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  38160 ccatgttatttct 38172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 161 - 339
Target Start/End: Original strand, 195661 - 195839
Alignment:
Q  161 tggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
    |||| ||||||||||| || ||||| |||||||||||| | || || || ||||| || || ||| |||||||| ||| | |||| |||||||| |||||    
T  195661 tggatcgttttgtggttgtctttatcgatgatattttgatttactccaagtctgaagaagaacatgctgagcatctgaaggttgtcttgcaagtgttgaa 195760  T
Q  261 agagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    ||||||  || | | ||||||  | |||||| ||||||| |||||||| || || ||||| | ||| ||||| ||||||    
T  195761 agagaagaaactttatgctaaactatctaagtgtgagttctggttgaaagaggtaagttttcttggccatgtcatttct 195839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 25234 - 25141
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagaga 265  Q
    |||||||| |||||||||||||||||| | ||||| ||  |||| ||||||||| | ||||| |||| ||||||||||||  | ||||||||||    
T  25234 gtggtggtatttatagatgatattttgatttattctaagactgaagaggagcatgcagagcacttgaagattgtgttgcagattttgaaagaga 25141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 316
Target Start/End: Complemental strand, 1183 - 974
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| || || ||||||||||| |||||| | || |||||| |||||||||| |  ||||| || |||||||||||||||||| || | || ||    
T  1183 ctaacgcgccgggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatcagtttgttgttgtgtttatagatgatattatgatatactc 1084  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     ||  | || ||||| ||| | ||||||||||| ||||| ||||||||  |||| |||||  | |||| ||| || || || ||| |||| || ||||||    
T  1083 taagaccgaagaggaacatgcggagcatttgagaattgttttgcaagtactgaaggagaagaagttatatgccaaattatcgaagtgtgaattctggttg 984  T
Q  307 aaggaagtga 316  Q
    || |||||||    
T  983 aacgaagtga 974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 40268 - 40107
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| ||||| |||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  40268 gtgtttatcgatgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 40169  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
    |||| ||||||||| |||| || |||||||| ||||| ||||| | ||| ||||| ||||||    
T  40168 ctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttggccatgttatttct 40107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 14365 - 14477
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| |||| || || ||||||||||| ||||| | |||    
T  14365 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattttctaagtgtgaattctgtttgaaggaagtaagttttcttgg 14464  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  14465 ccatgttatttct 14477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 305
Target Start/End: Complemental strand, 24338 - 24202
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| |||||||| ||||||||| || | ||||| ||  |||| ||||||||| | || ||| ||| ||||||||||||||| || ||||| ||      
T  24338 tttgtggttgtgtttattgatgatattctgatttattctaagactgaagaggagcatgcagaacatctgaagattgtgttgcaagtattaaaagaaaaga 24239  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggtt 305  Q
    | || | |||||||||||| ||| ||||||| |||||    
T  24238 agttgtatgctaagttgtcgaagtgtgagttctggtt 24202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 339
Target Start/End: Original strand, 946 - 1161
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| |  |||||||| || || ||||||| ||||||| | || || || ||||| || || |    
T  946 tttatggagtacatgaatcgcatctttcatgcatttttggatcagtttgtggttgttttcatagatggtattttgatttactccaagtctgaagaagaac 1045  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    || |||||||||||| | | || |||||||| |||||||||||  |  | | |||||| || |||||| |||| || |||||||| || |||||||| |     
T  1046 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattatctaagtgtgaattctggttgaaagaggtgagttttct 1145  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  1146 tggacatgttatttct 1161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 266
Target Start/End: Original strand, 6468 - 6610
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || || || ||||| || || |    
T  6468 tttatggagtacatgaatcgcatctttcatgcgtttttggatcggttcgtggttgtttttatcgatgatattttgatttactccaagtctgaagaagaac 6567  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    || |||||||||||| | | || |||||||| |||||||||||    
T  6568 atgctgagcatttgaagctggttttgcaagtgttgaaagagaa 6610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 308
Target Start/End: Original strand, 16058 - 16298
Alignment:
Q  67 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 166  Q
    |||||||| |||||||||||  ||||||| || || ||  | || ||||||||||| |||||| | ||||||||| | || |||||| | ||| | || |    
T  16058 tatggacattatgagtattcagtgatgcctttgggtgttacaaacgcgccaggtgtgtttatgtagtacatgaatcgcatttttcatgcgtatctagatc 16157  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||| |||||  | || || |||||||||||| | || || ||  |||| |||||  || |||||||||||| |||| | |||||||| || || |||||    
T  16158 gtttcgtggttatattcatcgatgatattttgatatactctaagactgaagaggaatatgctgagcatttgaagatt-ttttgcaagtgttcaaggagaa 16256  T
Q  267 ccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
      | |||| |||||||||||| ||| |||| || ||||||||    
T  16257 gaagttatatgctaagttgtcaaagtgtgaattctggttgaa 16298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 266
Target Start/End: Complemental strand, 16825 - 16668
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||| ||||| || |||||||| ||||||||| | || |||||| |   |||||| || || |||||||| ||||| |||||||||||| | || || |    
T  16825 aatgcaccaggagtatttatggagtacatgaatcgcatctttcatgcacttttggatcggttcgtggtggtttttatcgatgatattttgatttactcca 16726  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | ||||| || || ||| |||||||||||| | | || ||| |||| |||||||||||    
T  16725 agtctgaagaagaacatgctgagcatttgaagctggttttgtaagtgttgaaagagaa 16668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 9682 - 9775
Alignment:
Q  212 ctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggtt 305  Q
    |||| ||||||||| | || ||||||| ||||||||||||| | |||||||||||  | || | |||||||||||| ||| ||||||| |||||    
T  9682 ctgaagaggagcatacagaacatttgaagattgtgttgcaaattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtt 9775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 19896 - 19989
Alignment:
Q  212 ctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggtt 305  Q
    |||| ||||||||| | || ||||||| ||||||||||||| | |||||||||||  | || | |||||||||||| ||| ||||||| |||||    
T  19896 ctgaagaggagcatacagaacatttgaagattgtgttgcaaattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtt 19989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 317
Target Start/End: Complemental strand, 20407 - 20214
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| |||||||||   || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || || ||  |||| || || |    
T  20407 tttatggagtacatgaatcatatctttcatgcatttttggatcggttcgtggttgtttttattgatgatattttgatttactccaagactgaagaagaac 20308  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgag 317  Q
    || |||||||||||| | | || |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||| ||||    
T  20307 atgctgagcatttgaagttggttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaattgag 20214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 14833 - 14986
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| |||||||| |||||||||  ||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  14833 ctaacgcgcctggtgtttttatggagtacatgaatctaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 14932  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  14933 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 14986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 320
Target Start/End: Complemental strand, 3750 - 3554
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||| ||||| | || |||||| | | |||||| ||||| ||||| || || || ||||| |||||| | || || ||  ||||||| || |    
T  3750 tttatggagtacgtgaatcgcatttttcatgcatttttggatcgtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaac 3651  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    || |||||||||||| || ||| ||| |||| |||||||||||  | || | |||||| ||||| ||| |||| || |||||||| || ||||||||    
T  3650 atgctgagcatttgaagactgttttggaagtgttgaaagagaaaaagttttatgctaaattgtcaaagtgtgaattatggttgaaagaggtgagttt 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 305
Target Start/End: Complemental strand, 43041 - 42905
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| |||||||| ||||||||| || | ||||| ||  |||| || |||||| | || ||| |||  |||||||||||| | |||||||||||      
T  43041 tttgtggttgtgtttattgatgatattctgatctattcaaagactgaagaagagcatgcagaacatctgaaaattgtgttgcaaatattgaaagagaaga 42942  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggtt 305  Q
    | || | |||||||||||| ||| ||||||| |||||    
T  42941 agttgtatgctaagttgtcgaagtgtgagttctggtt 42905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 16273 - 16113
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 277  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  16273 gtgtttattgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaaatttatg 16174  T
Q  278 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 338  Q
    |||| ||||||||| |||| || |||||||| ||| | ||||| | ||| ||||| |||||    
T  16173 ctaacttgtctaagtgtgaattctggttgaaagaattaagttttcttggccatgttatttc 16113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 339
Target Start/End: Complemental strand, 7390 - 7175
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | ||| || || || ||||| || ||||| |||||||||||| | || || ||  | ||||| || |    
T  7390 tttatggagtacatgaatcgtatctttcatgcatttttagatcggttcgtggttgtttttattgatgatattttgatttactccaagaccgaggaagaac 7291  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 323  Q
    ||  ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||||||| |||| || ||||| || ||||||||||| |     
T  7290 atgttgagcatttgaagttggttttgcaagtgttgaaagagaagaaactttatgcgaaattgtctaagtgtgaattctggttaaaagaagtgagttttct 7191  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  7190 tggacatgttatttct 7175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 53169 - 53018
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || ||||| ||||||||| || | ||||| ||  |||| || |||||| | || ||| ||| ||||||||||||| | |||||||||||      
T  53169 tttgtggttgtatttattgatgatattctgatttattctaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaa 53070  T
Q  269 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    | || | || ||||||||| ||| ||||||| ||||| |  |||||||||||    
T  53069 agttgtatgttaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 53018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 42227 - 42374
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||| |||| ||| || ||||||||||| ||||||   || |||||| |||||||||| || |||||  | |||||||||||||||||| || | || ||    
T  42227 ctaacgcgcaaggagtgtttatggaatatatgaatcatatttttcatgcttatttggatcgatttgtttttgtgtttatagatgatattctgatatactc 42326  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagt 254  Q
     ||  | |||||||| ||| | |||||||||||  |||| ||||||||    
T  42327 caagaccgaggaggaacatgccgagcatttgagatttgttttgcaagt 42374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 320
Target Start/End: Original strand, 217542 - 217753
Alignment:
Q  109 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||| |||||||| |||||||| |||||||||   || |||||| | | ||| || ||||| ||||| ||| | || |||||||||||| | || ||||    
T  217542 aatgccccaggtgtgtttatggagtacatgaatcatatttttcatgcgttttttgatcgtttcgtggttgtgatcattgatgatattttgatatactcga 217641  T
Q  209 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    | |  || || || |||  ||||||||||| |||||| ||||||||  ||||||||||  |  ||| || ||| ||||| ||| ||||||| | ||||||    
T  217642 agttcgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatatgttaaattgtcaaagtgtgagttctagttgaa 217741  T
Q  309 ggaagtgagttt 320  Q
     || ||||||||    
T  217742 tgaggtgagttt 217753  T

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Target: scaffold0501 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 337
Target Start/End: Complemental strand, 4260 - 4150
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| ||||||| |||||||| || || ||||| | |||    
T  4260 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggtaagttttcttgg 4161  T
Q  327 tcatgtgattt 337  Q
     ||||| ||||    
T  4160 ccatgttattt 4150  T

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Target: scaffold0149 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 5532 - 5629
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||||||| |||||||| ||||| || ||| | ||||| ||  |||| || |||||| | || ||| ||| ||||||||||||||| |||||||||||    
T  5532 tttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaagtgttgaaagagaa 5629  T

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Target: scaffold0149; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 9963 - 10060
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||||||| |||||||| ||||| || ||| | ||||| ||  |||| || |||||| | || ||| ||| ||||||||||||||| |||||||||||    
T  9963 tttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaagtgttgaaagagaa 10060  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 35562 - 35481
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| ||||||| ||||||||    
T  35562 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaa 35481  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 3186 - 3271
Alignment:
Q  220 gagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggtt 305  Q
    |||||| | |||||| ||| |||||| |||||||| |||||||||||  | || | |||||||||||| ||| ||||||| |||||    
T  3186 gagcatgcagagcatctgaagattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtt 3271  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 99682 - 99895
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||| |||| || ||| | ||| ||||    |||||||| |||||||| ||||| ||| || | |||||    
T  99682 ctaatgcgcctggtgtgttcatggagtatatgaatcgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacattctgatctattc 99781  T
Q  207 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 306  Q
     |   |||| || |||||| | || ||| ||| ||||||||||||| |  | ||||||||  | |||| |||||||||||| ||| ||||||| |||||     
T  99782 tagaactgaagaagagcatgcagaacatctgaagattgtgttgcaaattctaaaagagaaaaagttatatgctaagttgtcgaagtgtgagttctggtta 99881  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  99882 agtgaagtgagttt 99895  T

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Target: scaffold0676 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 8095 - 7999
Alignment:
Q  212 ctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 308  Q
    |||||||||| ||| |||| ||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||  ||||||| ||||||||    
T  8095 ctgaggaggaacatgctgaacatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaaatgtgagttctggttgaa 7999  T

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Target: scaffold0333 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 17720 - 17608
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||||||| | | || |||||||| |||||||||||  |  | | |||||| || |||||| |||| || |||||||| ||||||||||| | |||    
T  17720 ctgagcatttgaagctggttttgcaagtgttgaaagagaagaatctttatgctaaattatctaagtgtgaattctggttgaaagaagtgagttttcttgg 17621  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  17620 ccatgttatttct 17608  T

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Target: scaffold0256 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 23314 - 23426
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| || ||||| |||||||||||  || | | ||| ||  |||||||| |||| || |||||||| ||||||||||| | |||    
T  23314 ctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaactgtctaagtgtgaattctggttgaaagaagtgagttttcttgg 23413  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  23414 ccatgttatttct 23426  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 320
Target Start/End: Original strand, 25082 - 25278
Alignment:
Q  124 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 223  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||| |||||  | ||||| || ||||||||| | || || ||   |||||| || |    
T  25082 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttctttttattgacgatattttgatttactccaagattgaggaagaac 25181  T
Q  224 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    || |||||||||||| | | || |||||||| |||||||| ||  || | | |||||| || |||||| |||| || |||||||| ||| |||||||    
T  25182 atgctgagcatttgaagctggttttgcaagtgttgaaagataagaaactttatgctaaattatctaagtgtgaattctggttgaaagaattgagttt 25278  T

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Target: scaffold0239 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 339
Target Start/End: Original strand, 10974 - 11138
Alignment:
Q  175 gtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattat 274  Q
    ||||| ||||| |||||||||||  | ||||| ||  |||| ||||||||| | || ||| |||||||||| |||||||| || ||||||||  | || |    
T  10974 gtggtatttattgatgatattttaatttattctaagactgaagaggagcatgcagaacatctgaggattgtattgcaagtatttaaagagaagaagttgt 11073  T
Q  275 gtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 339  Q
     ||| || ||||| ||  ||||||||||| | |  ||||| ||||||| ||||||| | ||||||    
T  11074 atgccaaattgtcaaaatgtgagttttggctaagtgaagtaagtttccttggtcatattatttct 11138  T

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Target: scaffold0222 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 320
Target Start/End: Complemental strand, 9114 - 9034
Alignment:
Q  240 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||| ||||| |||||||||||  | || |||||||||||||| ||| ||||||| | ||| |  |||||||||||    
T  9114 gattgtgttacaagttttgaaagagaaaaagttgtgtgctaagttgtcgaagtgtgagttctagttaagtgaagtgagttt 9034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 28811 - 28923
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| || |||| |||||||| || || ||||| | |||    
T  28811 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtaagttatggttgaaagaggtaagttttcttgg 28910  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  28911 ccatgttatttct 28923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 44883 - 44995
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||||| |||||| | |||||||||||  || | | ||| || ||||||||| |||| || |||||||| || |||||||| | |||    
T  44883 ctgagcatctgaagattgtcttgcaaatgttgaaagagaagaaactttatgccaaattgtctaagtgtgacttctggttgaaagaggtgagttttcttgg 44982  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  44983 ccatgttatttct 44995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 3593 - 3705
Alignment:
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 326  Q
    |||||||| ||| |||| | |||||||| |||||||||||  || | | |||||| || |||||| ||||||| |||||||| || || ||||| | |||    
T  3593 ctgagcatctgaagattatcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggtaagttttcttgg 3692  T
Q  327 tcatgtgatttct 339  Q
     ||||| ||||||    
T  3693 ccatgttatttct 3705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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