View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7225_low_6 (Length: 231)

Name: NF7225_low_6
Description: NF7225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7225_low_6
NF7225_low_6
[»] chr4 (63 HSPs)
chr4 (19-231)||(12691974-12692201)
chr4 (1-231)||(1645706-1645951)
chr4 (7-231)||(14351733-14351972)
chr4 (7-231)||(23942752-23942988)
chr4 (1-231)||(29628625-29628869)
chr4 (19-231)||(24629408-24629635)
chr4 (8-231)||(21067220-21067458)
chr4 (1-231)||(9423815-9424060)
chr4 (19-231)||(24628952-24629182)
chr4 (19-231)||(21220306-21220533)
chr4 (1-106)||(23943199-23943304)
chr4 (12-231)||(50398506-50398740)
chr4 (7-231)||(3169144-3169383)
chr4 (11-231)||(53996082-53996317)
chr4 (38-231)||(4127431-4127640)
chr4 (19-111)||(44471300-44471392)
chr4 (19-111)||(49998709-49998801)
chr4 (19-111)||(50814800-50814892)
chr4 (12-111)||(50398961-50399060)
chr4 (27-231)||(4127872-4128092)
chr4 (19-111)||(7678597-7678689)
chr4 (12-111)||(51331249-51331348)
chr4 (1-111)||(13613855-13613964)
chr4 (19-111)||(35871701-35871792)
chr4 (23-106)||(15306070-15306153)
chr4 (22-112)||(23091489-23091579)
chr4 (19-111)||(23350258-23350350)
chr4 (19-111)||(44470850-44470941)
chr4 (1-231)||(21067675-21067914)
chr4 (19-111)||(1464220-1464312)
chr4 (20-111)||(33764933-33765024)
chr4 (25-111)||(14571702-14571788)
chr4 (19-111)||(4185788-4185880)
chr4 (19-111)||(17029403-17029495)
chr4 (27-111)||(27029350-27029434)
chr4 (23-111)||(43928943-43929030)
chr4 (22-111)||(27026576-27026664)
chr4 (15-111)||(31817823-31817919)
chr4 (19-111)||(17628584-17628676)
chr4 (23-111)||(27578436-27578524)
chr4 (19-111)||(8467783-8467867)
chr4 (19-111)||(20306139-20306228)
chr4 (70-111)||(14572176-14572217)
chr4 (19-111)||(17028947-17029039)
chr4 (127-231)||(23943337-23943440)
chr4 (20-111)||(23976194-23976286)
chr4 (36-106)||(4186245-4186315)
chr4 (22-111)||(31817376-31817465)
chr4 (69-109)||(39902478-39902518)
chr4 (23-112)||(42838695-42838787)
chr4 (124-231)||(50399088-50399195)
chr4 (122-215)||(53854900-53854993)
chr4 (19-111)||(27578884-27578976)
chr4 (19-54)||(14571663-14571698)
chr4 (36-111)||(52048659-52048733)
chr4 (69-111)||(41869991-41870033)
chr4 (7-112)||(44831069-44831179)
chr4 (118-231)||(8467889-8468001)
chr4 (19-56)||(27578261-27578298)
chr4 (23-88)||(33294871-33294936)
chr4 (19-67)||(11828460-11828508)
chr4 (118-230)||(17028813-17028925)
chr4 (19-111)||(17629041-17629132)
[»] chr1 (45 HSPs)
chr1 (19-231)||(20054517-20054744)
chr1 (19-231)||(20054973-20055200)
chr1 (19-231)||(20055429-20055656)
chr1 (19-231)||(20055885-20056112)
chr1 (19-231)||(20056341-20056568)
chr1 (19-231)||(20057244-20057471)
chr1 (19-231)||(20054061-20054288)
chr1 (19-231)||(20845642-20845869)
chr1 (19-231)||(20057700-20057927)
chr1 (1-228)||(43057486-43057728)
chr1 (7-231)||(12883462-12883701)
chr1 (19-231)||(38340844-38341071)
chr1 (22-227)||(52250148-52250368)
chr1 (19-231)||(16451914-16452141)
chr1 (19-231)||(16461067-16461294)
chr1 (19-231)||(20056797-20057015)
chr1 (1-231)||(30872913-30873157)
chr1 (19-224)||(50002688-50002908)
chr1 (1-231)||(43057028-43057272)
chr1 (7-111)||(2634997-2635101)
chr1 (20-111)||(20060322-20060413)
chr1 (19-111)||(35759589-35759681)
chr1 (19-170)||(35760895-35761061)
chr1 (1-112)||(7548163-7548274)
chr1 (36-170)||(20061189-20061338)
chr1 (1-231)||(50003038-50003283)
chr1 (1-111)||(50002248-50002358)
chr1 (19-112)||(46693716-46693809)
chr1 (16-111)||(12728064-12728160)
chr1 (23-111)||(51372859-51372947)
chr1 (36-111)||(2328388-2328463)
chr1 (7-111)||(2634539-2634643)
chr1 (20-227)||(31822645-31822867)
chr1 (19-111)||(16907307-16907399)
chr1 (19-111)||(23180803-23180895)
chr1 (22-86)||(52250641-52250705)
chr1 (22-86)||(52250978-52251042)
chr1 (1-59)||(35009959-35010017)
chr1 (36-108)||(16440577-16440649)
chr1 (51-111)||(31823097-31823157)
chr1 (19-101)||(16410704-16410786)
chr1 (118-229)||(2634864-2634975)
chr1 (20-111)||(10820665-10820758)
chr1 (118-170)||(35759703-35759755)
chr1 (1-102)||(7229906-7230007)
[»] chr5 (53 HSPs)
chr5 (1-231)||(10926909-10927154)
chr5 (1-231)||(10927366-10927611)
chr5 (19-231)||(2193754-2193981)
chr5 (19-231)||(21886127-21886354)
chr5 (19-231)||(34371550-34371777)
chr5 (1-231)||(34372006-34372251)
chr5 (23-231)||(34867728-34867951)
chr5 (1-231)||(27646798-27647043)
chr5 (1-111)||(1821979-1822089)
chr5 (19-231)||(17445436-17445663)
chr5 (14-231)||(39146877-39147109)
chr5 (19-231)||(42788627-42788853)
chr5 (19-111)||(2474478-2474570)
chr5 (1-228)||(20039438-20039679)
chr5 (19-231)||(18304369-18304596)
chr5 (19-111)||(2474032-2474124)
chr5 (19-111)||(8642015-8642107)
chr5 (1-104)||(29680070-29680173)
chr5 (1-111)||(3886564-3886674)
chr5 (19-111)||(189141-189233)
chr5 (1-111)||(3887020-3887130)
chr5 (19-111)||(8391303-8391394)
chr5 (19-111)||(22556609-22556701)
chr5 (19-111)||(22557042-22557134)
chr5 (22-231)||(15512996-15513221)
chr5 (19-111)||(18750177-18750269)
chr5 (10-231)||(5066863-5067098)
chr5 (23-104)||(11757266-11757347)
chr5 (19-111)||(20858522-20858614)
chr5 (19-111)||(30684537-30684629)
chr5 (19-111)||(30719786-30719878)
chr5 (23-109)||(4657979-4658064)
chr5 (118-227)||(1880023-1880132)
chr5 (19-111)||(32574639-32574731)
chr5 (36-111)||(4673469-4673544)
chr5 (62-111)||(16370732-16370781)
chr5 (74-112)||(39801498-39801536)
chr5 (78-111)||(2058696-2058729)
chr5 (118-170)||(3887152-3887204)
chr5 (118-170)||(8642129-8642181)
chr5 (118-170)||(22975105-22975157)
chr5 (23-111)||(42429218-42429306)
chr5 (123-174)||(30719905-30719956)
chr5 (20-54)||(30720242-30720276)
chr5 (118-159)||(1821916-1821957)
chr5 (31-84)||(5785901-5785954)
chr5 (111-180)||(8391409-8391478)
chr5 (70-111)||(11160713-11160754)
chr5 (70-111)||(24182277-24182318)
chr5 (118-170)||(2473958-2474010)
chr5 (118-170)||(3886696-3886748)
chr5 (118-170)||(22556535-22556587)
chr5 (19-111)||(43356601-43356693)
[»] chr8 (54 HSPs)
chr8 (24-231)||(10844821-10845043)
chr8 (19-231)||(22026317-22026544)
chr8 (19-231)||(27925837-27926064)
chr8 (1-231)||(32292335-32292580)
chr8 (1-231)||(33852221-33852466)
chr8 (19-231)||(22548976-22549203)
chr8 (19-231)||(41659086-41659312)
chr8 (7-231)||(8080311-8080550)
chr8 (19-231)||(22548530-22548757)
chr8 (1-111)||(6464873-6464983)
chr8 (26-231)||(28375042-28375262)
chr8 (19-231)||(27022319-27022546)
chr8 (7-231)||(28453277-28453515)
chr8 (19-231)||(12827235-12827462)
chr8 (1-228)||(2043999-2044241)
chr8 (19-111)||(25144845-25144937)
chr8 (19-111)||(25147609-25147701)
chr8 (7-111)||(41913043-41913147)
chr8 (1-111)||(22840493-22840602)
chr8 (22-109)||(10844599-10844686)
chr8 (19-111)||(17103154-17103246)
chr8 (19-109)||(12100766-12100856)
chr8 (17-111)||(21316088-21316182)
chr8 (19-108)||(34308460-34308549)
chr8 (23-111)||(25148040-25148128)
chr8 (1-111)||(27819209-27819319)
chr8 (7-112)||(15818985-15819089)
chr8 (23-106)||(31283636-31283719)
chr8 (15-111)||(15567533-15567629)
chr8 (63-231)||(27021904-27022091)
chr8 (19-108)||(34308916-34309009)
chr8 (1-95)||(25307855-25307947)
chr8 (23-108)||(3745177-3745262)
chr8 (7-111)||(1297080-1297184)
chr8 (1-111)||(30527445-30527555)
chr8 (10-111)||(22705245-22705335)
chr8 (122-228)||(29971500-29971606)
chr8 (118-231)||(22840624-22840737)
chr8 (127-231)||(6465014-6465118)
chr8 (74-112)||(6466782-6466820)
chr8 (22-88)||(10729670-10729736)
chr8 (63-111)||(6466330-6466378)
chr8 (1-112)||(30334871-30334982)
chr8 (36-111)||(3744711-3744786)
chr8 (68-111)||(15568035-15568078)
chr8 (111-170)||(25144771-25144830)
chr8 (19-94)||(34687920-34687995)
chr8 (1-59)||(10729748-10729806)
chr8 (118-159)||(17103091-17103132)
chr8 (73-106)||(17429578-17429611)
chr8 (118-174)||(27819341-27819397)
chr8 (36-92)||(28912848-28912904)
chr8 (1-33)||(32292092-32292124)
chr8 (126-174)||(44041885-44041933)
[»] scaffold0047 (3 HSPs)
scaffold0047 (1-231)||(18098-18342)
scaffold0047 (1-231)||(17561-17806)
scaffold0047 (163-231)||(17819-17887)
[»] chr2 (42 HSPs)
chr2 (19-231)||(41754227-41754454)
chr2 (19-231)||(25337978-25338205)
chr2 (22-231)||(29804620-29804844)
chr2 (12-231)||(33174896-33175129)
chr2 (1-231)||(1706980-1707224)
chr2 (1-231)||(15619836-15620081)
chr2 (1-231)||(16379331-16379576)
chr2 (1-231)||(25434019-25434264)
chr2 (1-111)||(16379010-16379120)
chr2 (36-231)||(18098876-18099086)
chr2 (19-231)||(33770948-33771166)
chr2 (19-231)||(8256464-8256691)
chr2 (12-231)||(33174443-33174675)
chr2 (1-231)||(27882889-27883134)
chr2 (7-231)||(1912463-1912701)
chr2 (19-112)||(11388259-11388352)
chr2 (1-111)||(38898875-38898985)
chr2 (19-111)||(30966763-30966855)
chr2 (1-231)||(15639678-15639917)
chr2 (19-112)||(11394606-11394698)
chr2 (19-111)||(5399798-5399890)
chr2 (19-111)||(24818399-24818491)
chr2 (20-111)||(30966307-30966398)
chr2 (122-231)||(18448017-18448126)
chr2 (23-112)||(29259605-29259694)
chr2 (20-107)||(83094-83181)
chr2 (21-111)||(30963703-30963793)
chr2 (22-111)||(13191047-13191136)
chr2 (19-111)||(30963244-30963336)
chr2 (63-174)||(1953150-1953276)
chr2 (23-105)||(30961868-30961950)
chr2 (21-111)||(8073965-8074055)
chr2 (129-231)||(18098667-18098769)
chr2 (19-111)||(16542058-16542151)
chr2 (30-111)||(20502096-20502176)
chr2 (118-230)||(16378877-16378988)
chr2 (62-105)||(9909171-9909214)
chr2 (19-78)||(32377697-32377756)
chr2 (81-111)||(8181394-8181424)
chr2 (122-179)||(11388179-11388235)
chr2 (74-111)||(18447954-18447991)
chr2 (23-111)||(37552640-37552726)
[»] chr6 (53 HSPs)
chr6 (7-230)||(17850857-17851095)
chr6 (19-231)||(20850259-20850486)
chr6 (1-231)||(11062224-11062468)
chr6 (1-231)||(2720526-2720772)
chr6 (1-231)||(6330875-6331120)
chr6 (1-230)||(17851313-17851557)
chr6 (28-231)||(2681206-2681424)
chr6 (36-231)||(3652424-3652634)
chr6 (12-230)||(21311910-21312143)
chr6 (19-231)||(23986298-23986525)
chr6 (19-109)||(16520043-16520133)
chr6 (19-231)||(20896669-20896896)
chr6 (19-111)||(13492405-13492497)
chr6 (23-111)||(13492862-13492950)
chr6 (19-109)||(9352137-9352227)
chr6 (10-231)||(20126154-20126390)
chr6 (7-231)||(14771688-14771927)
chr6 (19-111)||(7911951-7912043)
chr6 (19-111)||(7912383-7912475)
chr6 (19-111)||(13191494-13191586)
chr6 (19-111)||(17027512-17027604)
chr6 (44-225)||(27334105-27334301)
chr6 (44-225)||(27394845-27395041)
chr6 (118-231)||(3652917-3653030)
chr6 (12-231)||(21311453-21311687)
chr6 (19-111)||(17731090-17731186)
chr6 (31-111)||(15929655-15929735)
chr6 (22-228)||(2890823-2891042)
chr6 (19-231)||(23776379-23776605)
chr6 (1-111)||(33774965-33775077)
chr6 (7-111)||(20735768-20735872)
chr6 (1-111)||(9440272-9440382)
chr6 (1-111)||(1991626-1991736)
chr6 (19-85)||(28780209-28780275)
chr6 (1-85)||(2891256-2891340)
chr6 (11-111)||(20732651-20732751)
chr6 (23-111)||(28065820-28065911)
chr6 (50-111)||(31821704-31821765)
chr6 (19-106)||(12194406-12194493)
chr6 (45-111)||(15929272-15929338)
chr6 (17-111)||(17205412-17205505)
chr6 (1-49)||(3652658-3652706)
chr6 (19-111)||(3885071-3885160)
chr6 (46-112)||(30729847-30729913)
chr6 (118-191)||(31821787-31821860)
chr6 (118-173)||(9440404-9440459)
chr6 (41-111)||(10964377-10964447)
chr6 (23-105)||(33470916-33470998)
chr6 (1-34)||(3653052-3653085)
chr6 (23-111)||(32292958-32293044)
chr6 (122-170)||(9440527-9440575)
chr6 (23-111)||(9440842-9440930)
chr6 (118-230)||(33775099-33775211)
[»] chr3 (49 HSPs)
chr3 (1-231)||(37044973-37045218)
chr3 (19-231)||(28561684-28561911)
chr3 (1-231)||(30529625-30529870)
chr3 (1-231)||(39640875-39641120)
chr3 (7-231)||(2911033-2911272)
chr3 (19-231)||(14813887-14814114)
chr3 (19-231)||(39653102-39653329)
chr3 (19-231)||(50347684-50347911)
chr3 (7-112)||(4067329-4067434)
chr3 (19-231)||(16811319-16811546)
chr3 (1-231)||(20885080-20885324)
chr3 (1-111)||(25238647-25238757)
chr3 (19-231)||(11180015-11180241)
chr3 (12-223)||(25230222-25230448)
chr3 (12-223)||(25237809-25238035)
chr3 (19-226)||(13150080-13150302)
chr3 (12-231)||(25230679-25230913)
chr3 (12-231)||(25238266-25238500)
chr3 (19-231)||(32227202-32227429)
chr3 (19-111)||(31284257-31284349)
chr3 (19-111)||(13150535-13150627)
chr3 (19-111)||(32386715-32386807)
chr3 (12-111)||(25248184-25248283)
chr3 (19-217)||(32227453-32227665)
chr3 (22-231)||(16810863-16811087)
chr3 (19-111)||(8067353-8067445)
chr3 (31-202)||(25239070-25239256)
chr3 (20-111)||(14820227-14820318)
chr3 (12-107)||(25802522-25802617)
chr3 (22-170)||(41472300-41472462)
chr3 (23-111)||(27187315-27187403)
chr3 (39-111)||(32796936-32797008)
chr3 (12-111)||(7493954-7494053)
chr3 (1-111)||(25802967-25803077)
chr3 (7-111)||(7477264-7477368)
chr3 (19-111)||(29224397-29224489)
chr3 (20-111)||(41474070-41474161)
chr3 (162-231)||(39653558-39653627)
chr3 (122-226)||(13155303-13155405)
chr3 (127-216)||(14820107-14820196)
chr3 (19-95)||(53150793-53150869)
chr3 (36-111)||(26309987-26310062)
chr3 (118-231)||(25803099-25803212)
chr3 (118-170)||(31284371-31284423)
chr3 (118-169)||(7477191-7477242)
chr3 (118-169)||(7493881-7493932)
chr3 (69-111)||(3890051-3890093)
chr3 (69-111)||(3899873-3899915)
chr3 (61-111)||(31103983-31104033)
[»] chr7 (56 HSPs)
chr7 (1-231)||(2611615-2611860)
chr7 (19-231)||(34405572-34405799)
chr7 (1-231)||(679755-679999)
chr7 (1-231)||(35474084-35474329)
chr7 (1-170)||(42515091-42515275)
chr7 (19-231)||(2189082-2189309)
chr7 (19-231)||(36422190-36422417)
chr7 (19-195)||(42515518-42515709)
chr7 (19-231)||(28495792-28496019)
chr7 (1-231)||(6747561-6747806)
chr7 (19-111)||(2941738-2941830)
chr7 (12-111)||(46425814-46425913)
chr7 (19-216)||(2193209-2193421)
chr7 (19-109)||(2465808-2465898)
chr7 (17-111)||(6719053-6719147)
chr7 (19-111)||(9125032-9125124)
chr7 (19-111)||(13125117-13125209)
chr7 (19-109)||(2465999-2466089)
chr7 (1-111)||(9623281-9623390)
chr7 (126-231)||(10430701-10430806)
chr7 (12-228)||(29357430-29357660)
chr7 (23-111)||(18833359-18833447)
chr7 (7-111)||(25182434-25182538)
chr7 (7-111)||(29038989-29039093)
chr7 (19-98)||(28495589-28495668)
chr7 (1-231)||(35527084-35527328)
chr7 (1-111)||(26421723-26421833)
chr7 (36-111)||(11517387-11517462)
chr7 (1-108)||(22529198-22529305)
chr7 (121-231)||(43233351-43233461)
chr7 (19-100)||(13122486-13122567)
chr7 (23-111)||(5406573-5406661)
chr7 (2-111)||(31406552-31406657)
chr7 (127-230)||(26957661-26957764)
chr7 (19-88)||(7646459-7646528)
chr7 (127-231)||(2463580-2463684)
chr7 (122-231)||(3305411-3305520)
chr7 (15-111)||(26421282-26421378)
chr7 (13-111)||(7461326-7461423)
chr7 (19-85)||(7646514-7646580)
chr7 (46-111)||(16192392-16192457)
chr7 (151-231)||(16811966-16812046)
chr7 (31-111)||(36015404-36015484)
chr7 (36-111)||(1628786-1628861)
chr7 (118-196)||(28495703-28495781)
chr7 (1-70)||(3305311-3305380)
chr7 (23-111)||(37672233-37672321)
chr7 (63-111)||(43233486-43233534)
chr7 (19-67)||(43776271-43776319)
chr7 (36-111)||(11372524-11372599)
chr7 (48-107)||(31743834-31743893)
chr7 (118-170)||(2941852-2941904)
chr7 (63-112)||(6585680-6585731)
chr7 (188-231)||(6719228-6719271)
chr7 (185-231)||(29039173-29039219)
chr7 (121-170)||(9124958-9125007)
[»] scaffold0243 (1 HSPs)
scaffold0243 (19-231)||(1158-1385)
[»] scaffold0333 (2 HSPs)
scaffold0333 (19-231)||(4499-4726)
scaffold0333 (19-231)||(4954-5186)
[»] scaffold0168 (1 HSPs)
scaffold0168 (19-231)||(2680-2907)
[»] scaffold0499 (1 HSPs)
scaffold0499 (19-176)||(2032-2204)
[»] scaffold0002 (2 HSPs)
scaffold0002 (19-226)||(154700-154922)
scaffold0002 (122-226)||(151583-151685)
[»] scaffold0024 (1 HSPs)
scaffold0024 (19-111)||(105793-105885)
[»] scaffold0322 (2 HSPs)
scaffold0322 (19-111)||(19039-19131)
scaffold0322 (118-170)||(18216-18268)
[»] scaffold0040 (1 HSPs)
scaffold0040 (19-111)||(2191-2283)
[»] scaffold0022 (4 HSPs)
scaffold0022 (19-111)||(162659-162751)
scaffold0022 (1-111)||(69778-69888)
scaffold0022 (19-88)||(163167-163236)
scaffold0022 (19-85)||(163115-163181)
[»] scaffold0020 (1 HSPs)
scaffold0020 (19-111)||(107444-107536)
[»] scaffold0018 (1 HSPs)
scaffold0018 (19-111)||(10373-10465)
[»] scaffold0557 (2 HSPs)
scaffold0557 (12-111)||(2178-2277)
scaffold0557 (122-220)||(699-797)
[»] scaffold0389 (1 HSPs)
scaffold0389 (23-98)||(13518-13593)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-112)||(26142-26235)
[»] scaffold0005 (3 HSPs)
scaffold0005 (25-111)||(245588-245674)
scaffold0005 (70-111)||(245159-245200)
scaffold0005 (19-54)||(245678-245713)
[»] scaffold0088 (1 HSPs)
scaffold0088 (72-228)||(23614-23785)
[»] scaffold0442 (1 HSPs)
scaffold0442 (127-231)||(2443-2547)
[»] scaffold0391 (1 HSPs)
scaffold0391 (1-111)||(14814-14924)
[»] scaffold0664 (1 HSPs)
scaffold0664 (49-170)||(3993-4129)
[»] scaffold0277 (1 HSPs)
scaffold0277 (19-85)||(14683-14749)
[»] scaffold0007 (2 HSPs)
scaffold0007 (67-111)||(142303-142347)
scaffold0007 (118-170)||(142369-142421)
[»] scaffold0101 (1 HSPs)
scaffold0101 (73-111)||(45459-45497)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-54)||(246728-246781)


Alignment Details
Target: chr4 (Bit Score: 114; Significance: 6e-58; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 12691974 - 12692201
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  12691974 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 12692073  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  12692074 gccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 12692173  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  12692174 gtcgtgccttgtgcaccggcgaccactc 12692201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 1645706 - 1645951
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||| |    
T  1645706 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtaat 1645805  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  ||| |||| ||||||| |||| ||||| |||  ||||||||| | ||||||||||||||||| |||||    
T  1645806 accaaacaattcttataagtcttccttcaaccatgtagtcccatacctacacggcctcaagattcctctcattccgatgtgattcggttcctctagaagc 1645905  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||| |||||| || |||| ||||||||||||||||||||||||||    
T  1645906 tgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactc 1645951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 14351972 - 14351733
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||| ||||  | |||||||||||||||||||||||||||||||| ||||||||||    
T  14351972 atccaaagactactcgaagtcaaacacgcttaactgtggagttcttatggaataggataccaaaaagaagatgcatcttgttgatatagatagtaccaaa 14351873  T
Q  107 caatt---------------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
     || |               ||||  |||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||  ||| |||| ||||||    
T  14351872 aaactcttacaagccttccttcaaccatgcagactcatacatgcacgacctcaggatccctctcattctggtgtgattcggtttgtctagaagttgtcgg 14351773  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||| || |||| |||||||||||||||||| |||||||    
T  14351772 gagccgctcattgtcgtgccttgtgcaccggcaaccactc 14351733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 23942752 - 23942988
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  23942752 atccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaa 23942851  T
Q  107 caat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    ||||               |||||  ||| |||  ||||||| |||| || ||||||| ||||||||| | ||||||||||||||||| ||||||||| |    
T  23942852 caattcttataagctttccttcaaccatgtagttccatacctacacggccccaggatccctctcattccgatgtgattcggttcctctagaagctgtcag 23942951  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||   || |||| ||||||||||||||||||||||||||    
T  23942952 gag---ctcattgtcgtgccttgtgcaccggcgaccactc 23942988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 29628625 - 29628869
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||  ||||||||| | ||||  |||||||||||||||||||||    
T  29628625 tcacccatccaaagactactccaagtcaaacacgcttaactgtggagttcttatggaatgggctaccaaaca-aagacacatcttgttgatataggtagt 29628723  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  ||| |||||||||||| |||| |||||||||| ||||||||  | ||||||||||||||||| |||||    
T  29628724 accaaacaattcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcatttcgatgtgattcggttcctctagaagc 29628823  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||| | ||||||| |||| ||||||||||||||||||||||||||    
T  29628824 tgtcagaagccactcattggcgtgccttgtgcaccggcgaccactc 29628869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 24629408 - 24629635
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||||||||||||||| ||||||||||| ||||||| |||  || |||| |||||||||||||||||||||||||||||||||||||||||||           
T  24629408 ctccaagtcaagcacgcttaactgtggaattcttatggaacgaggtaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 24629507  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            | ||  |||||||| ||||||| ||||||||||||| | ||||||||| ||||||||||||||||||| |||||||||  ||||| || |||    
T  24629508 gcattcctttaaccatgcagtcccatacctacacgacctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaagagccgctcatt 24629607  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||| ||||||||||||||    
T  24629608 gtcgtgccttgtgaaccggcgaccactc 24629635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 231
Target Start/End: Complemental strand, 21067458 - 21067220
Alignment:
Q  8 tccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaac 107  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||| |||||| |||||||  ||||||||||||||||||||||||| |||||||||||     
T  21067458 tccaaagactactccaagtcaagcacgcttaattgtggagtacttttagaatgagctaccggaaagaagatgcatcttgttgatatatgtagtaccaaat 21067359  T
Q  108 aat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcggg 192  Q
    |||               |||||  |||||||||||||| ||||||||||| ||||| ||||||||| ||||||||||| ||| |||  ||| |||||||    
T  21067358 aattattattagtcttccttcaaccatgcagtctcatacatgcacgacctcgggatccctctcattccggtgtgattcgattcgtctataagttgtcggg 21067259  T
Q  193 agccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||| || |||  ||||||||||||| ||||||||||||    
T  21067258 agccgctcattatcgtgccttgtgcatcggcgaccactc 21067220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 9423815 - 9424060
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||| ||||||||||||| ||||||||  |||| |||| | ||||||| ||||  ||||| | |||||||||||||||||||||||||||||||    
T  9423815 tcacccatcctaagactactccaattcaagcacacttaattgtgaaattcttatggaatgggctactagaaagaagatgcatcttgttgatataggtagt 9423914  T
Q  101 accaaacaatt---------------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    |||||||||||               ||||  |||||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||| ||||     
T  9423915 accaaacaattattataagccttctttcaaccatgcagtcccatacatgcacgacctcaggatccctctcattccggtgtgattcggttcgtctagaagt 9424014  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
     |||||||||||||  ||| |||||||||||||||| |||||||||    
T  9424015 cgtcgggagccactctttgtcgtgccttgtgcaccgacgaccactc 9424060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 24628952 - 24629182
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||  ||||||  ||||||||||||||||||||||||||||||||||||||||||            
T  24628952 ctccaagtcaagcacgcttaactgtggagttcttatggaacgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 24629051  T
Q  111 ----------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccactt 200  Q
              || ||  |||||||| ||||||| |||| |||||||| | ||||||||| ||||||||||||||||||  ||||||||| |||||| ||     
T  24629052 gcctaattcctttaaccatgcagtcccatacctacacggcctcaggaaccctctcattccggtgtgattcggttcctcaagaagctgtcaggagccgctc 24629151  T
Q  201 attgccgtgccttgtgcaccggcgaccactc 231  Q
    |||| ||||||||||||||||||||||||||    
T  24629152 attgtcgtgccttgtgcaccggcgaccactc 24629182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 21220306 - 21220533
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    ||||||||||| |||| ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||            
T  21220306 ctccaagtcaaacacgcttaactgtgtagttcttatagaatgagttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 21220405  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||  ||| |||||||| || | ||||| |||| ||||||||||| ||||||||||||||||| ||||||| |||||||| || |||    
T  21220406 gcattccttcaaccatatagtttcatacctacatggcctcatgatccctctcattctgatgtgattcggttcctctagaagctgccgggagccgctcatt 21220505  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||| | ||||||||    
T  21220506 gtcgtgccttgtgcaccagtgaccactc 21220533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23943199 - 23943304
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  23943199 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagt 23943298  T
Q  101 accaaa 106  Q
    ||||||    
T  23943299 accaaa 23943304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 231
Target Start/End: Original strand, 50398506 - 50398740
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat- 110  Q
    |||| |||||||||||||||||| |||||| |||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  50398506 aagaatactccaagtcaagcacgcttaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 50398605  T
Q  111 --------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagcc 196  Q
                  |||||  ||| ||||  |||||| |||| |||||||||| ||||||||| | |||||||||| |  ||| |||| |||||||||||    
T  50398606 cttataagccttccttcaaccatgtagtcctatacctacacggcctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtcgggagcc 50398705  T
Q  197 acttattgccgtgccttgtgcaccggcgaccactc 231  Q
     || |||| | ||||||||||||||||||||||||    
T  50398706 gctcattgtcatgccttgtgcaccggcgaccactc 50398740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 3169383 - 3169144
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| || |  | |||||||||||||||||||||||||||||||||||||||||||    
T  3169383 atccaaagactactccaagtcaagcacgcttaagtgtggagttcttatggattgggttaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 3169284  T
Q  107 caat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    ||||               |||||  ||| |||| ||||||| |||| ||||| |||  ||||||||| | |||||||||||||||||  |||||||| |    
T  3169283 caatttttataagtcttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcattccgatgtgattcggttcctctataagctgtcag 3169184  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||| | || |||| |||| |||||||||||| ||||||||    
T  3169183 gagtcgctcattgtcgtgtcttgtgcaccggtgaccactc 3169144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 53996082 - 53996317
Alignment:
Q  11 aaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat 110  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||    
T  53996082 aaagactactccaagtcaagcacacttaactgtggagttcttatggaatgagataccaaaaagaagatgaatcttgttgatataggtagtaccaaacaat 53996181  T
Q  111 ---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagc 195  Q
                   |||||  ||| |||| |||| || ||   ||||||||||  |||||||| | |||||||||||||||||  ||| ||| ||||||    
T  53996182 ttttataagcattccttcaaccatgtagtcccatatctacatagcctcaggatccttctcattccgatgtgattcggttcctctaaaagttgttgggagc 53996281  T
Q  196 cacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    | || |||| ||||||||||||||||||||||||||    
T  53996282 cgctcattgtcgtgccttgtgcaccggcgaccactc 53996317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 231
Target Start/End: Original strand, 4127431 - 4127640
Alignment:
Q  38 aactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat---------------ttcaatgatgca 122  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||               |||||  ||| |    
T  4127431 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaactatgta 4127530  T
Q  123 gtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctc-tggaagctgtcgggagccacttattgccgtgccttgtgcaccg 221  Q
    ||| ||||||| || | |||||||||| ||||||||| | |||||||||||||||| | |||| ||||||||||| || |||| ||||||||||||||||    
T  4127531 gtcccatacctacatggcctcaggatccctctcattccgatgtgattcggttcctcttagaagttgtcgggagccgctcattgtcgtgccttgtgcaccg 4127630  T
Q  222 gcgaccactc 231  Q
    ||||||||||    
T  4127631 gcgaccactc 4127640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 44471300 - 44471392
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||| ||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44471300 ctccaaatcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 44471392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 49998801 - 49998709
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||| |||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49998801 ctccaagtcaaacacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 49998709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 50814800 - 50814892
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  50814800 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaatt 50814892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 50398961 - 50399060
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| ||||||||||||| |||| ||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  50398961 aagaatactccaagtcaaacacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcgtgttgatataggtagtaccaaacaatt 50399060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 231
Target Start/End: Original strand, 4127872 - 4128092
Alignment:
Q  27 caagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat---------------t 111  Q
    |||||||| |||||| || ||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||               |    
T  4127872 caagcacgcttaactctgaagttcttatggaattggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttcct 4127971  T
Q  112 tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctc-tggaagctgtcgggagccacttattgccgtgc 210  Q
    ||||  ||  |||||||| ||| || | |||||||||| ||||||||| | ||||||||| |||||| | |||||||| ||||||| || |||| |||||    
T  4127972 tcaaccatatagtctcatgcctacatggcctcaggatccctctcattccgatgtgattcgattcctcttagaagctgttgggagccgctcattgtcgtgc 4128071  T
Q  211 cttgtgcaccggcgaccactc 231  Q
    |||||||||||||||||||||    
T  4128072 cttgtgcaccggcgaccactc 4128092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 7678597 - 7678689
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||  ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  7678597 ctccaagtcaagcacacttaactgtggagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaatt 7678689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 51331249 - 51331348
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| |||||||||||||||||| |||||||||||||||||||  ||| ||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  51331249 aagaatactccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgtatcttgttgatatagatagtaccaaacaatt 51331348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 13613855 - 13613964
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||| |||||||||| |||| |||||||||||||||||||||||| | |||||  |||||||||||||||||||||||||||| ||    
T  13613855 tcacccatccaaagactagtccaagtcaaacacgcttaactgtggagttcttatagaatgaactacc-gaaagaagatgcatcttgttgatataggtggt 13613953  T
Q  101 accaaacaatt 111  Q
    | |||||||||    
T  13613954 atcaaacaatt 13613964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 35871792 - 35871701
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  35871792 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaa-atgcatcttgttgatataggtggtaccaaacaatt 35871701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 15306070 - 15306153
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  15306070 aagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaa 15306153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 23091489 - 23091579
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattt 112  Q
    ||||||||||| | |||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  23091489 caagtcaagcatgcttaactgtggagtttttatagaataagctaccagaaagaagatgcatcttgttaatatatgtagtaccaaacaattt 23091579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 23350258 - 23350350
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||| || ||||||||| |||  ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  23350258 ctccaagtcaagcacgcttaactatgaagttcttatggaaggagctaccgaaaagaagatgcatcttgttgatataggaagtaccaaacaatt 23350350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 44470850 - 44470941
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| || ||| || | |||||||||||||||||||||||||||||||||||||||    
T  44470850 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagttacgaaca-gaagatgcatcttgttgatataggtagtaccaaacaatt 44470941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 21067914 - 21067675
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||| ||||   ||||||||   || ||| |||||||||||||||||||     
T  21067914 tcacccatccaaagactacttcaagtcaagcacgcttaactgtgaagttcttatggaatggactaccaaa---aaaatgtatcttgttgatataggtagc 21067818  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  |||||||| |||||||||||| |||| ||||   |  ||||||||||||||||||||| |||  ||      
T  21067817 accaaacaattcttataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggat---ttccattctggtgtgattcggttcgtctataatt 21067721  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| || |||| |||||||| |||||||||||||||||    
T  21067720 tgtcgggagccgctcattgtcgtgccttctgcaccggcgaccactc 21067675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 1464312 - 1464220
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||| ||||||| | || |||| |||||||||  ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1464312 ctccaagttaagcacgctaaattgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 1464220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 33765024 - 33764933
Alignment:
Q  20 tccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||| ||||||||| |||| |||| |||||||||| ||| |||||| |||||||||||||||||||||| ||||||||| |||||||||||    
T  33765024 tccaaatcaagcacgcttaagtgtgaagttcttataaaatgagctacaaaaaagaagatgcatcttgttggtataggtagcaccaaacaatt 33764933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 14571702 - 14571788
Alignment:
Q  25 gtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||| ||||||||||||||||||| |  |  |||||  |||||||||||||||||||||||||||||||||||||||||||    
T  14571702 gtcaagcacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 14571788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 4185880 - 4185788
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||   |||||||| |||||||| |||||| ||||||||||||||||||||||||||||| |||| || ||| |||||||||    
T  4185880 ctccaagtcaagcatacttaactgtagagttcttgtagaatgagctaccaaaaagaagatgcatcttgttggtatatgtggtatcaaacaatt 4185788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 17029495 - 17029403
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||| ||||||  ||||||||||||||||||| |||| || ||||||||  || |||||||||||||||||||||||||| ||||||||    
T  17029495 ctccaagttaagcactcttaactgtggagttcttatggaataaggtaccaaaagtaatatgcatcttgttgatataggtagtactaaacaatt 17029403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 27029434 - 27029350
Alignment:
Q  27 caagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||  ||||||||||||||||||| ||||  |||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  27029434 caagcacacttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaataatt 27029350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 43928943 - 43929030
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||| |||| |||||| ||||||| ||| || ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  43928943 aagtcaagcacgtttaattgtggatttcttat-gaaataactaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaatt 43929030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 27026664 - 27026576
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||| ||||||  | ||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  27026664 caagtcaagcacgcttaactacgtagttcttatggaatgggctaccaaaaa-aagatgcatcttgttgatataggtagtatcaaacaatt 27026576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 31817823 - 31817919
Alignment:
Q  15 actactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||| ||||||||||||| |||||| || |||||||||  |||   ||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  31817823 actactacaagtcaagcacgcttaactatgaagttcttatgaaatggactaccgaaaagaagatgcatcttgttggtataggtagtaccgaacaatt 31817919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 17628676 - 17628584
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||| ||||| | ||||||||| ||||||| |  |  |||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  17628676 ctccaagtcaggcacgctcaactgtggaattcttatgggttgggctatcgaaaagaagatgcatcttgttggtataggtagtaccaaacaatt 17628584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 27578436 - 27578524
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||| |||||| |||||||||||| |  |  | |||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  27578436 aagtcaagcacgcttaactatggagttcttatggtttgggataccgaaaagaagatgcatcttgttgatataggtagcaccaaataatt 27578524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 8467783 - 8467867
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||          |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  8467783 ctccaagtcaagcacgcttaactgtggagttctgg--------gctaccgaaaagaagatgcatcttgttggtataggtagtaccaaacaatt 8467867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 20306139 - 20306228
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||| ||| |||||||||  |||  | |||||||||||   |||||||||||||||||| |||||||||||||||    
T  20306139 ctccaagtcaagcacgcttaaccgtgtagttcttatgaaatgggataccaaaaaga---tgcatcttgttgatatagatagtaccaaacaatt 20306228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 14572176 - 14572217
Alignment:
Q  70 aaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14572176 aaagaagatgcatcttgttgatataggtagtaccaaacaatt 14572217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 17029039 - 17028947
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||  |||||| || ||||||||| |||| |||||   |||| |||| ||||||||||||||||||||| ||| |||||||    
T  17029039 ctccaagtcaagcactcttaactatgaagttcttatggaataagctaggtaaaataagacgcatcttgttgatataggtagcacctaacaatt 17028947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 23943337 - 23943440
Alignment:
Q  127 catacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgac 226  Q
    ||||||| |||| |||||||||| || ||||| || ||||||||||||||||| |||||||||  ||||| || |||| |||||||  | ||||||||||    
T  23943337 catacctacacg-cctcaggatccctatcattttgatgtgattcggttcctctagaagctgtcaagagccgctcattgtcgtgcctcatacaccggcgac 23943435  T
Q  227 cactc 231  Q
    |||||    
T  23943436 cactc 23943440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 23976194 - 23976286
Alignment:
Q  20 tccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaa-agaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||| |||||||||||||| ||||    || ||||  |||| |||||||||||||||||  |||||||||||||||||||||    
T  23976194 tccaagtcaagcacgtttaactgtggagtttttatgattttggctatgaaaaaagaagatgcatcttgttagtataggtagtaccaaacaatt 23976286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 4186315 - 4186245
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    ||||||||| |||||||||  |||  |||||||||||||||||| |||||||| || ||||||||||||||    
T  4186315 ttaactgtgtagttcttatgcaatgggctaccaaaaagaagatgaatcttgttcatgtaggtagtaccaaa 4186245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 31817376 - 31817465
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||| |||| |||| ||| |||||||||  ||||  ||| |  |||||||||||||| |||||| |||||||||||||||||||||    
T  31817376 caagtcaaacacgcttaattgtagagttcttaaggaatgggctgcggaaaagaagatgcattttgttggtataggtagtaccaaacaatt 31817465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 39902478 - 39902518
Alignment:
Q  69 aaaagaagatgcatcttgttgatataggtagtaccaaacaa 109  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  39902478 aaaagaagatgcatcttgttgatatagatagtaccaaacaa 39902518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 42838787 - 42838695
Alignment:
Q  23 aagtcaagcacgattaactgtgga-gttcttatagaattagctacc-aaaaagaa-gatgcatcttgttgatataggtagtaccaaacaattt 112  Q
    ||||||| |||| ||||||||| | |||||||| |||| | ||| | |||||||| ||||||| |||||||||||||||||||||||||||||    
T  42838787 aagtcaaacacgcttaactgtgaaagttcttatggaatgaactatcgaaaaagaaagatgcattttgttgatataggtagtaccaaacaattt 42838695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 50399088 - 50399195
Alignment:
Q  124 tctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggc 223  Q
    |||||||||| ||||  ||||||||| ||||||||| | |||||||||| |  ||| |||| |||| | |||| || |||| | |||||||||||| |||    
T  50399088 tctcatacctacacggtctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtcagaagccgctcattgtcatgccttgtgcactggc 50399187  T
Q  224 gaccactc 231  Q
    ||||||||    
T  50399188 gaccactc 50399195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 53854900 - 53854993
Alignment:
Q  122 agtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgt 215  Q
    |||||||||||| |||  | ||| |||| ||||||||| | ||||||||||||| |||  ||||||||||||||| || |||| || |||||||    
T  53854900 agtctcatacctacactgcttcatgatccctctcattccgatgtgattcggttcgtctataagctgtcgggagccgctcattgtcgagccttgt 53854993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 27578884 - 27578976
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||| ||||||| ||||||||| ||||||||| ||    |||||  |||||||||||  |||  |||||||| ||||||||||||||||    
T  27578884 ctccaagttaagcacgcttaactgtgtagttcttatggatagggctactgaaaagaagatgtgtctaattgatatatgtagtaccaaacaatt 27578976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 14571663 - 14571698
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttat 54  Q
    |||||||||||||||| |||||||||||||||||||    
T  14571663 ctccaagtcaagcacgcttaactgtggagttcttat 14571698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 52048659 - 52048733
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||| |||| |  ||| |||| ||||||||||||||||  |||| |||||| |||||||||    
T  52048659 ttaactgtggagttcttatggaatgacttac-aaaatgaagatgcatcttgttagtatacgtagtatcaaacaatt 52048733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 41870033 - 41869991
Alignment:
Q  69 aaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||| |||||||||||||||||||| || ||||||    
T  41870033 aaaagaagatgcgtcttgttgatataggtagtatcatacaatt 41869991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 44831179 - 44831069
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaact-----gtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagta 101  Q
    ||||||||||||||  |||||||||||| ||||||     ||| ||||| |||  |||  |||||| ||||||| || |||||||||  | |||||||||    
T  44831179 atccaaagactactataagtcaagcacgtttaacttaactgtgaagttcatatgaaatgggctaccgaaaagaatatacatcttgttagtttaggtagta 44831080  T
Q  102 ccaaacaattt 112  Q
    |||||||||||    
T  44831079 ccaaacaattt 44831069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 8467889 - 8468001
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgc 217  Q
    ||| ||||||||||||||||   ||||||||| || |||||||| |||| ||||||| | || ||||||| | |||||| |  | || | ||||||||||    
T  8467889 atgtagtctcatacctgcacagtctcaggatccctttcattctgatgtggttcggttgc-ctagaagctgccaggagccgcgcaatgtcatgccttgtgc 8467987  T
Q  218 accggcgaccactc 231  Q
    || |||||||||||    
T  8467988 actggcgaccactc 8468001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 27578261 - 27578298
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatag 56  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  27578261 ctccaagtcaagcacgcttaactgtgaagttcttatag 27578298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 33294871 - 33294936
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgtt 88  Q
    ||||| |||||| || |||||||||||||||| || | | |||| ||||||||||||||| |||||    
T  33294871 aagtcgagcacgctttactgtggagttcttatggagtgaactacaaaaaagaagatgcattttgtt 33294936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 11828460 - 11828508
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctacc 67  Q
    |||||||| ||||||| ||||||||||||||||||| |||  |||||||    
T  11828460 ctccaagtaaagcacgcttaactgtggagttcttatggaaggagctacc 11828508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 230
Target Start/End: Complemental strand, 17028925 - 17028813
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgc 217  Q
    |||||||| ||||| |||| | | |||||||| ||||||||| | |||||||| |||   || |||||||   |||||| || |||| | ||||||||||    
T  17028925 atgcagtcccatacatgcaaggcttcaggatccctctcattccgatgtgattcagtttgcctagaagctgcaaggagcctctcattgtcatgccttgtgc 17028826  T
Q  218 accggcgaccact 230  Q
    |||| ||||||||    
T  17028825 accgccgaccact 17028813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 17629132 - 17629041
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||| | |||| |||||| ||||| | || |  ||| | |||||||||| ||||||| ||  |||||||||||||||||||||    
T  17629132 ctccaagtcaagcatgcttaa-tgtggaattcttttggattgggcttctaaaaagaagaggcatcttattagtataggtagtaccaaacaatt 17629041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20054517 - 20054744
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  20054517 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20054616  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  20054617 gccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 20054716  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  20054717 gtcgtgccttgtgcaccggcgaccactc 20054744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20054973 - 20055200
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  20054973 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20055072  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  20055073 gccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 20055172  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  20055173 gtcgtgccttgtgcaccggcgaccactc 20055200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20055429 - 20055656
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  20055429 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20055528  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  20055529 gccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 20055628  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  20055629 gtcgtgccttgtgcaccggcgaccactc 20055656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20055885 - 20056112
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  20055885 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20055984  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  20055985 gccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 20056084  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  20056085 gtcgtgccttgtgcaccggcgaccactc 20056112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20056341 - 20056568
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  20056341 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20056440  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  20056441 gccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 20056540  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  20056541 gtcgtgccttgtgcaccggcgaccactc 20056568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20057244 - 20057471
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  20057244 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20057343  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  20057344 gccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 20057443  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  20057444 gtcgtgccttgtgcaccggcgaccactc 20057471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20054061 - 20054288
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||| ||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||           
T  20054061 ctcctagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20054160  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            ||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  20054161 gccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 20054260  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  20054261 gtcgtgccttgtgcaccggcgaccactc 20054288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20845642 - 20845869
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||           
T  20845642 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaacaaacaattcttataa 20845741  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            ||||  ||||||||||||||||||||| |||||||| |  |||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  20845742 gccttccttcaaccatgcagtctcatacctgcacggcctcaggaaccgtctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 20845841  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  20845842 gtcgtgccttgtgcaccggcgaccactc 20845869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20057700 - 20057927
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa--------- 109  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||             
T  20057700 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20057799  T
Q  110 ------tttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
          ||||||  |||||||| |||||||||||| |||||||| | ||||||||  |||||||||| |||||||| ||||||||  |||||| || |||    
T  20057800 gccttctttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcatttcggtgtgattcagttcctctagaagctgttaggagccgctcatt 20057899  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  20057900 gtcgtgccttgtgcaccggcgaccactc 20057927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 43057486 - 43057728
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||| |||||||||||| |||| ||||||||||||||||||| ||||  |||||| |||||||||||||||||||| |||||||||||    
T  43057486 tcaccgatccaaagaccactccaagtcaatcacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagt 43057585  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  ||| |||||||||||| |||| |||||||||| ||||||||| | |||||||||||||||||  ||||    
T  43057586 accaaacaattcttataagccttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcattccgatgtgattcggttcctctaaaagc 43057685  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgacca 228  Q
    ||||||||||| || |||| | |||||||||||||||||||||    
T  43057686 tgtcgggagccgctcattggcatgccttgtgcaccggcgacca 43057728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 12883701 - 12883462
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    ||||||| |||||| |||||||| |||  |||||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  12883701 atccaaaaactacttcaagtcaaacacacttaactgtggagtttttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaa 12883602  T
Q  107 caat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    ||||               |||||| |||||||| |||||||||||  |||| |||||  |||||||| ||||||||||||||| ||| ||||||||||     
T  12883601 caattcttataagtattccttcaatcatgcagtcccatacctgcacagcctcgggatccatctcattccggtgtgattcggttcgtctagaagctgtcga 12883502  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||| || |||| |||||||||||||||| |||||||||    
T  12883501 gagccgctcattgtcgtgccttgtgcaccgacgaccactc 12883462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 38341071 - 38340844
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||| ||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||            
T  38341071 ctccaagtcaagcacgcttaactgtgaagttcttatggaatgagctaccgaaatgaagatgcatcttgttgatataggtagtaccaaacaattcttataa 38340972  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| |||||||| |  |||||||| ||||||||||||||||||| ||||||||| | |||| || |||    
T  38340971 gccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccatctcattccggtgtgattcggttcctctagaagctgtcagtagccgctcatt 38340872  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||| ||||||||    
T  38340871 gtcgtgccttgtgcaccggtgaccactc 38340844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 52250368 - 52250148
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat----------- 110  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||               
T  52250368 caagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcc 52250269  T
Q  111 ----ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgcc 206  Q
        ||| |  ||| |||| ||||||| || | ||||| |||| ||||||||| ||||||||||||||||||| |||||||||||||||| || |||| |    
T  52250268 ttccttcgaccatgtagtcccatacctacaaggcctcatgatccctctcattccggtgtgattcggttcctctagaagctgtcgggagccgctcattgtc 52250169  T
Q  207 gtgccttgtgcaccggcgacc 227  Q
    |||||||||||||||||||||    
T  52250168 gtgccttgtgcaccggcgacc 52250148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 16451914 - 16452141
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| | ||||| ||||||||||||||||||||||||||||||||||| ||||||            
T  16451914 ctccaagtcaagcacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 16452013  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| | ||||| || | |||||||||| ||||||||| | ||||||||| ||||||| |||||||||||||||| || |||    
T  16452014 gctttccttcaaccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcatt 16452113  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  16452114 gtcgtgccttgtgcaccggcgaccactc 16452141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 16461067 - 16461294
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| | ||||| ||||||||||||||||||||||||||||||||||| ||||||            
T  16461067 ctccaagtcaagcacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 16461166  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| | ||||| || | |||||||||| ||||||||| | ||||||||| ||||||| |||||||||||||||| || |||    
T  16461167 gctttccttcaaccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcatt 16461266  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  16461267 gtcgtgccttgtgcaccggcgaccactc 16461294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20056797 - 20057015
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttcaatga 118  Q
    ||||||||||| |||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||   || |    
T  20056797 ctccaagtcaaacacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattctcat-a 20056895  T
Q  119 tgcagtc--tcatacctgca-----cgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgcc 211  Q
     ||  ||  |||  ||||||       ||||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||| ||||||    
T  20056896 agccttccttcaaccctgcagtcccatacctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgcc 20056995  T
Q  212 ttgtgcaccggcgaccactc 231  Q
    ||||||||||||||||||||    
T  20056996 ttgtgcaccggcgaccactc 20057015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 30872913 - 30873157
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||| ||||||||||| | |||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  30872913 tcacccatccaaagactactgcaagtcaagcatgcttaattgtggagttcttatagaatggactaccaaaaagaagatgcatcttgttgatataggtagt 30873012  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    | ||||||||               |||||  || |||||||||||||||||| |||||| ||| ||||||||| ||||||||||||||| ||| |||      
T  30873013 atcaaacaattcttaaaagtcttccttcaaccatacagtctcatacctgcacggcctcagaatccctctcattccggtgtgattcggttcgtctagaaat 30873112  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||| | |||| || |||| |||||||||||||||| |||||||||    
T  30873113 tgtc-gaagccgctcattgtcgtgccttgtgcaccgacgaccactc 30873157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 50002688 - 50002908
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    ||||||||||| |||| |||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  50002688 ctccaagtcaaacacgcttaactatggagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 50002787  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| ||| ||| |||| |||||||||| ||||||||| | |||||||||| |||||| |||| ||||||||||| || |||    
T  50002788 gccttccttcaaccatgcagtcccatgcctacacggcctcaggatctctctcattccgatgtgattcggctcctctagaagatgtcgggagccgctcatt 50002887  T
Q  204 gccgtgccttgtgcaccggcg 224  Q
    | | ||||||||||| |||||    
T  50002888 gtcatgccttgtgcatcggcg 50002908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 43057028 - 43057272
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||| |||| ||||||| |||| ||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||||||||||||    
T  43057028 tcacccatccaaagaccactctaagtcaatcacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagt 43057127  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    | ||||||||               |||||  ||| |||| ||||||| |||| ||| |||||| | ||||||||| ||||||||||||||||| |||      
T  43057128 atcaaacaattcttctaagccttccttcaaccatgtagtcacatacctacacggccttaggatc-ccctcattctgatgtgattcggttcctctagaaat 43057226  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||| | || |||| | |||||||||||||||| |||||||    
T  43057227 tgtcgggagtcgctcattgtcatgccttgtgcaccggcaaccactc 43057272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 2635101 - 2634997
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    ||||||||| ||||||||| ||| |||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  2635101 atccaaagattactccaagccaaacacgcttaactgtggagttcttattgaatgagctaccgaaaagaagatgcatcttgttggtataggtagtaccaaa 2635002  T
Q  107 caatt 111  Q
    |||||    
T  2635001 caatt 2634997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 20060322 - 20060413
Alignment:
Q  20 tccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||  ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20060322 tccaagtcaagcacacttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 20060413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 35759589 - 35759681
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||| || ||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35759589 ctccaagtcaagcacgtttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 35759681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 35760895 - 35761061
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||||||||||||||| ||||||  |||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||           
T  35760895 ctccaagtcaagcacgcttaactacggagttctcatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 35760994  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
            ||||  ||||||||||||||||||||| |||||||||| ||||||||| | ||||||||    
T  35760995 gctttccttcaaccatgcagtctcatacctgcacggcctcaggatccctctcattccgatgtgattc 35761061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 7548274 - 7548163
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||| ||| |||| ||||||||||||||  |||  |||||||||||||| ||||||||||||||||||| || |    
T  7548274 tcacccatccaaagactactccaagtcaagtacgcttaattgtggagttcttatcaaatgggctaccaaaaagaatatgcatcttgttgatatagttaat 7548175  T
Q  101 accaaacaattt 112  Q
    ||||||||||||    
T  7548174 accaaacaattt 7548163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 20061189 - 20061338
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat---------------ttcaatgatg 120  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||               |||||  |||    
T  20061189 ttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 20061288  T
Q  121 cagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||||||    
T  20061289 cagtcccatacctgcacgacctcaggatccctctcattctgatgtgattc 20061338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 50003038 - 50003283
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||| | | |||||||||||||||| ||||||||| ||||||| | |||| ||||||  ||||||||||||||||||||||||||||||||    
T  50003038 tcacccatccaaaaattgctccaagtcaagcacgcttaactgtgaagttcttttggaatgagctactgaaaagaagatgcatcttgttgatataggtagt 50003137  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||| ||||||               || ||  ||||||||  ||||||||| | |||||||||| ||||||||| | ||||||||||||||| | |||||    
T  50003138 acccaacaattattataagtctccctttaaccatgcagtcctatacctgcatggcctcaggatccctctcattccgatgtgattcggttcctttagaagc 50003237  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| |  |||  | |||||| ||||||| |||||||||    
T  50003238 tgtcgggagccgcacattatcatgccttttgcaccgacgaccactc 50003283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 50002248 - 50002358
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    |||||||||| || | | |||||||||||||||  | ||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||    
T  50002248 tcaccaatcccaaaattgctccaagtcaagcacactcaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgataaaggtagt 50002347  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  50002348 accaaacaatt 50002358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 46693716 - 46693809
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattt 112  Q
    |||||||||||||||| |||||||||||||| ||||  ||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46693716 ctccaagtcaagcacgcttaactgtggagttattatgaaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattt 46693809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 12728160 - 12728064
Alignment:
Q  16 ctactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt-accaaacaatt 111  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||  |||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  12728160 ctactccaagtcaagcatgcttaactgtggagttcttatggaatgtgctaccgaaaagaagatgcatcttgttgatataggcagtaaccaaacaatt 12728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 51372859 - 51372947
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||| |||| |||||||||||||| |||||||||||||| ||||||||    
T  51372859 aagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaataagatgcatcttgtcgatataggtagtactaaacaatt 51372947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 2328463 - 2328388
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2328463 ttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttaatataggtagtaccaaacaatt 2328388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 2634643 - 2634539
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||| ||||   ||| | ||||||||||||||||||||  ||||| ||||||||||    
T  2634643 atccaaagactactccaagtcaagcacgtttaacagtgaagttcttattgaatagactatcgaaaagaagatgcatcttgtttgtatagctagtaccaaa 2634544  T
Q  107 caatt 111  Q
    |||||    
T  2634543 caatt 2634539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 227
Target Start/End: Original strand, 31822645 - 31822867
Alignment:
Q  20 tccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat--------- 110  Q
    ||||||||||  ||| ||||||||||||||||| | || | ||||||| |||||||||||||| ||||||||||| ||||||||||| |||             
T  31822645 tccaagtcaaaaacgcttaactgtggagttcttttggattgagctaccgaaaagaagatgcatattgttgatatatgtagtaccaaataattcttataaa 31822744  T
Q  111 ------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattg 204  Q
          |||||  ||| |||||||||||| |||| ||||| |||| ||||||||||| ||||||| |||| |||| |||||||| ||||||| || |||     
T  31822745 tcttccttcaaccatgtagtctcatacctacacggcctcatgatccctctcattctgatgtgatttggttgctctagaagctgttgggagccgctcatta 31822844  T
Q  205 ccgtgccttgtgcaccggcgacc 227  Q
     |||||||| |||||| ||||||    
T  31822845 tcgtgccttctgcaccagcgacc 31822867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 16907399 - 16907307
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||| |||| |||||| |||||||||| ||||||   | ||  ||||||||||| |||||||||||||||||||||||||||||||    
T  16907399 ctccaagtcaaacacgcttaactatggagttcttgtagaatggaccactgaaaagaagatgtatcttgttgatataggtagtaccaaacaatt 16907307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 23180895 - 23180803
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||| |||||| ||||||| ||||  |||| | || ||||||| |||||||||||||||||||||||||| |||||    
T  23180895 ctccaagtcaagcacgcttaattgtggaattcttatggaatgggctagcgaatagaagatacatcttgttgatataggtagtaccaagcaatt 23180803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 52250705 - 52250641
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttg 86  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  52250705 caagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 52251042 - 52250978
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttg 86  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  52251042 caagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35009959 - 35010017
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaat 59  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  35009959 tcacccatccaaagactactccaagtcaagcacgcttaaccgtggagttcttatggaat 35010017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 16440577 - 16440649
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaca 108  Q
    |||||| || |||| ||||||||| ||||||||||||||| ||||||||||||| ||| ||||||| ||||||    
T  16440577 ttaactttgaagttattatagaatgagctaccaaaaagaatatgcatcttgttgttatcggtagtagcaaaca 16440649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 31823097 - 31823157
Alignment:
Q  51 ttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| |||| |||||||||||||||||||||| || |||||||||||||||||||| ||||    
T  31823097 ttatggaatgagctaccaaaaagaagatgcattttattgatataggtagtaccaaataatt 31823157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 16410704 - 16410786
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagta 101  Q
    ||||||||||| || | |||||| || ||||||| ||||||  ||||||||||| |||||||||||||||| ||| |||||||    
T  16410704 ctccaagtcaaacatgtttaactttgaagttcttctagaataggctaccaaaaacaagatgcatcttgttggtattggtagta 16410786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 2634975 - 2634864
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgc 217  Q
    |||||||| ||||||||||| |||||| |||| ||||||||| | ||||||||| ||   || |||| ||   ||||||||  |||| | ||||||||||    
T  2634975 atgcagtcccatacctgcacaacctcatgatccctctcattccgatgtgattcgatttgcctagaagttgctaggagccacacattgtcatgccttgtgc 2634876  T
Q  218 accggcgaccac 229  Q
    ||||||||||||    
T  2634875 accggcgaccac 2634864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 10820758 - 10820665
Alignment:
Q  20 tccaagtcaagcacgattaactgtggagttcttatagaattagctacc--aaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||| ||||||||| | |||||||  ||| ||  | |  ||||| |||||| ||||| |||||||||||||||||||||||||    
T  10820758 tccaagtcaagcacgcttaactgtgaatttcttatgaaatgagtcatcgaaaaaaaaagatgtatcttattgatataggtagtaccaaacaatt 10820665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 35759703 - 35759755
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||| |||||||||||| |||||||||| ||||||||| | ||||||||    
T  35759703 atgcagtcccatacctgcacggcctcaggatccctctcattccgatgtgattc 35759755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7229906 - 7230007
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    |||||||||| || | | ||||||||||| || | ||| || ||||||||||||  ||| | ||||| ||| |||||||| || ||||||||||| ||||    
T  7229906 tcaccaatcctaaaattgctccaagtcaaacatgcttatctatggagttcttatgtaatgaactaccgaaatgaagatgcttcgtgttgatatagttagt 7230005  T
Q  101 ac 102  Q
    ||    
T  7230006 ac 7230007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 9e-57; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 10926909 - 10927154
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||   ||||||||| ||||||||||||||||||||||||||||    
T  10926909 tcacccatccaaagactactccaagtcaagcacgtttaactgtggagttcttatggaatggactaccaaaaggaagatgcatcttgttgatataggtagt 10927008  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  ||| |||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||  ||||    
T  10927009 accaaacaattcttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctcattctgatgtgattcggttcctctataagc 10927108  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||||||||| ||| |||| |||||||||||||||| ||| |||||    
T  10927109 tgtcgggagctactcattgtcgtgccttgtgcaccgacgatcactc 10927154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 10927366 - 10927611
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  10927366 tcacccatccaaagactactccaagtcaagcacgtttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagt 10927465  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  ||| |||||||||||| |||| ||||| |||| ||||||||| | |||||||||||||||||  |||     
T  10927466 accaaacaattcttataagccttccttcaaccatgtagtctcatacctacacggcctcaagatccctctcattccgatgtgattcggttcctctataagt 10927565  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||| ||||||  || |||| |||||||||||||||| ||| |||||    
T  10927566 tgttgggagctgctcattgtcgtgccttgtgcaccgacgatcactc 10927611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 2193981 - 2193754
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||            
T  2193981 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 2193882  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| || | ||||| |||| ||||||||| || |||||||||||||||| |||||||||||||||| || |||    
T  2193881 gccttccttcaaccatgtagtcccatacctacaaggcctcatgatccctctcattccggcgtgattcggttcctctagaagctgtcgggagccgctcatt 2193782  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  2193781 gtcgtgccttgtgcaccggcgaccactc 2193754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 21886127 - 21886354
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||||||||||||||  |||||| |||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||           
T  21886127 ctccaagtcaagcacacttaactttggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataa 21886226  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            ||||  |||||||| ||||||||||| ||||||||| | ||||||||| ||||||||||||||||||| ||||||  | |||||| || |||    
T  21886227 gccttccttcaaccatgcagtcccatacctgcacaacctcaggaaccctctcattccggtgtgattcggttcctctagaagctaccaggagccgctcatt 21886326  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  21886327 gtcgtgccttgtgcaccggcgaccactc 21886354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 34371777 - 34371550
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| |||||||||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  34371777 ctccaagtcaagcacgcttaactgtggtgttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaa 34371678  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| || ||||| ||| |||  ||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  34371677 gcattccttcaaccatgcagtcccacacctgtacggccttgggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 34371578  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  34371577 gtcgtgccttgtgcaccggcgaccactc 34371550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 34372251 - 34372006
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    |||||||||| || | | |||||||||||||||| ||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||    
T  34372251 tcaccaatcccaaaattgctccaagtcaagcacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagt 34372152  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  ||| |||| ||||| || ||| |||  ||| | ||||||||||||||||||||||||||||| |||||    
T  34372151 accaaacaattcttttaagcattccttcaaccatgtagtcccatacttgtacggccttgggaaccctctcattctggtgtgattcggttcctctagaagc 34372052  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||| |||||| || |||| | ||||||||||||||||||||||||    
T  34372051 tgtcaggagccgctcattgtcctgccttgtgcaccggcgaccactc 34372006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 231
Target Start/End: Complemental strand, 34867951 - 34867728
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt----------- 111  Q
    |||| ||||||| |||||| ||||||||||||  ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||               
T  34867951 aagttaagcacgcttaactatggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcct 34867852  T
Q  112 ----tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccg 207  Q
        ||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||| ||| ||||||||| |||||| || |||| ||    
T  34867851 tccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcttctagaagctgtcaggagccgctcattgtcg 34867752  T
Q  208 tgccttgtgcaccggcgaccactc 231  Q
    ||||||||||||||||||| ||||    
T  34867751 tgccttgtgcaccggcgactactc 34867728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 27646798 - 27647043
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| || |||||||||||||||| |||||||| |||||||||||||||||||  |||  |||||||||||||||||||||||||||| ||||||||||    
T  27646798 tcacccatgcaaagactactccaagacaagcacgcttaactgtggagttcttatgaaatgggctaccaaaaagaagatgcatcttgttgttataggtagt 27646897  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  ||| || | ||||||| |||| ||  |||||| ||||||||| | ||||||||||||||||| |||||    
T  27646898 accaaacaattcttataagccttccttcaaccatgtagccccatacctacacggccctaggatccctctcattccgatgtgattcggttcctctagaagc 27646997  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| |  |||| |||||||||||||||||| |||||||    
T  27646998 tgtcgggagccgcacattggcgtgccttgtgcaccggcaaccactc 27647043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1822089 - 1821979
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  1822089 tcacccatccaaagactactccaagtcaagcacgcttaaatgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagt 1821990  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  1821989 accaaacaatt 1821979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 17445436 - 17445663
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||| ||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||            
T  17445436 ctccaagtcaagcacgcttaactgtggatttcttatggaatgagctaccgataagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 17445535  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||| ||| |||| |||||||||| ||||||||  | ||||||||||||||||| |||| ||| ||||||| || |||    
T  17445536 gccttccttcaaccatgtagtcccatgcctacacggcctcaggatccctctcatttcgatgtgattcggttcctctagaagttgttgggagccgctcatt 17445635  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    ||| |||||||||||||| |||||||||    
T  17445636 gccatgccttgtgcaccgtcgaccactc 17445663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 39147109 - 39146877
Alignment:
Q  14 gactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat--- 110  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||| |||||| ||||||||       
T  39147109 gactactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttaatataagtagtatcaaacaattct 39147010  T
Q  111 ------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccac 198  Q
                |||||  ||| |||| ||||||| |||| ||||| |||| ||||||||  | |||||||| |||||||| |||| |||| |||||| |    
T  39147009 tataagtctaccttcaaccatgtagtcccatacctacacggcctcatgatccctctcatttcgatgtgattcagttcctctagaagttgtcaggagccgc 39146910  T
Q  199 ttattgccgtgccttgtgcaccggcgaccactc 231  Q
    | |||| |||||||||||||||||||| |||||    
T  39146909 tcattgtcgtgccttgtgcaccggcgatcactc 39146877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 42788627 - 42788853
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa--------- 109  Q
    |||||||||||||||| ||||||||||||||||| | |||| ||||||| |||||||||||||||||||||||||||||||||||||||||             
T  42788627 ctccaagtcaagcacgcttaactgtggagttcttgtggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 42788726  T
Q  110 ------tttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
          ||||||  ||| |||| ||  ||| |||| |||||||||| ||||||||| | ||||||||||||||||| |||| ||||| ||||| || | |    
T  42788727 gtcttctttcaaccatgtagtcccaatcctacacggcctcaggatccctctcattccgttgtgattcggttcctctagaagttgtcgagagccgctca-t 42788825  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    |  |||||||||||||||||||||||||    
T  42788826 gttgtgccttgtgcaccggcgaccactc 42788853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 2474570 - 2474478
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2474570 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 2474478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 20039438 - 20039679
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||||||||||||||||||| |||||||||||  |||||||| |||||||||| ||||  |||||| ||||||| ||||||||||||||||||||||||    
T  20039438 tcaccaatccaaagactactctaagtcaagcacacttaactgtagagttcttatggaatgggctacc-aaaagaaaatgcatcttgttgatataggtagt 20039536  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  ||| ||||  |||||| |||| ||||| |||| ||||||||| | ||||||||||||  ||| |||||    
T  20039537 accaaacaattcttataagccttccttcaactatgtagtcctatacctacacggcctcatgatccctctcattccgatgtgattcggtttgtctagaagc 20039636  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgacca 228  Q
    ||||||||||  || |||| | |||||||||||||||||||||    
T  20039637 tgtcgggagctgctcattgtcatgccttgtgcaccggcgacca 20039679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 18304596 - 18304369
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    ||||||||||| || | ||||||||||| ||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||           
T  18304596 ctccaagtcaaacatgcttaactgtggaattcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtaccaaacaatttatataa 18304497  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            |||   ||| |||| ||||||| |||||||||||||||  |||||||| | ||||||| ||||| ||| |||||||||||||||| || |||    
T  18304496 gcttttcatcatccatgtagtcccatacctacacgacctcaggatccttctcattccgttgtgatttggttcgtctagaagctgtcgggagccgctcatt 18304397  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | |||| ||||||||||||||| |||||    
T  18304396 gtcgtgtcttgtgcaccggcgatcactc 18304369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 2474124 - 2474032
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  2474124 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggcagtaccaaacaatt 2474032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 8642015 - 8642107
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  8642015 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaataatt 8642107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 29680070 - 29680173
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||  |||  ||||||||||||||||||||||||||||||||||||| |    
T  29680070 tcacccatccaaagactactccaagtcaaacacgcttaactgtggagttcttatgtaatgggctaccaaaaagaagatgcatcttgttgatataggtatt 29680169  T
Q  101 acca 104  Q
    ||||    
T  29680170 acca 29680173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3886564 - 3886674
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||| | | ||||| ||||| |||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||    
T  3886564 tcacccatccaaaaattgctccacgtcaaacacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagt 3886663  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  3886664 accaaacaatt 3886674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 189233 - 189141
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||| | ||||||||||||||||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  189233 ctccaagtcaagcatgcttaactgtggagttcttatggaatgagctaccgaaaagaagatacatcttgttgatataggtagtaccaaacaatt 189141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3887020 - 3887130
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||| | | |||||||||||||||| ||||||||| ||||||||| |||| || |||| ||||||||||||||||||||||||||||||||    
T  3887020 tcacccatccaaaaattgctccaagtcaagcacgcttaactgtgaagttcttatggaatgagttaccgaaaagaagatgcatcttgttgatataggtagt 3887119  T
Q  101 accaaacaatt 111  Q
    |||||| ||||    
T  3887120 accaaataatt 3887130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 8391303 - 8391394
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  8391303 ctccaagtcaagcacgcttaactatggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatacagg-agtaccaaacaatt 8391394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 22556701 - 22556609
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||  |||| ||||||||| |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22556701 ctccaagtcagccacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 22556609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 22557134 - 22557042
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||| ||||| ||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  22557134 ctccaagtcaggcacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatattggtagtaccaaacaatt 22557042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 15512996 - 15513221
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat----------- 110  Q
    ||||||||||||| |||| |||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||| ||||||               
T  15512996 caagtcaagcacgtttaattgtggagttcttatggaatgagataccaaaaagaagatgcatcttgttgatattggtagtacc-aacaattcttataagca 15513094  T
Q  111 ------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattg 204  Q
          |||||  ||| |||| ||||||| |||  ||| | |||| ||||||||| | |||||||||||||||||  || |||||||||||| || |||     
T  15513095 tattccttcaaccatgtagtcccatacctacacagcctaatgatccctctcattccgatgtgattcggttcctctaaaaactgtcgggagccgctcatta 15513194  T
Q  205 ccgtgccttgtgcaccggcgaccactc 231  Q
     ||||||||||||||||||||||||||    
T  15513195 tcgtgccttgtgcaccggcgaccactc 15513221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 18750177 - 18750269
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||| |||||||| | |||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  18750177 ctccaagtcaagtacgattaattatggagttcttatggaataagctaccgaaaagaagatgcatctttttggtataggtagtaccaaacaatt 18750269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 231
Target Start/End: Original strand, 5066863 - 5067098
Alignment:
Q  10 caaagactactccaagtcaagcacgattaactgtggagttcttatagaattag-ctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaca 108  Q
    |||||||||||||||| ||| |||| |||| ||||||||| |||| ||| ||| ||||||||||||| ||||||||||||||||||| || |||||||||    
T  5066863 caaagactactccaaggcaaacacgtttaattgtggagtttttat-gaaatagactaccaaaaagaaaatgcatcttgttgatatagataataccaaaca 5066961  T
Q  109 at---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcggga 193  Q
    ||               || ||| || ||||||||||| |||||| |||| ||||| ||||||||||||||||||||| ||  ||| |||| || || ||    
T  5066962 attcttataagttttcctttaatcatacagtctcatacatgcacggcctcgggatctctctcattctggtgtgattcgatttgtctagaagttg-cgaga 5067060  T
Q  194 gccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||| || ||||  ||| |||| ||||||||||||||||    
T  5067061 gccgctcattgttgtgtcttgcgcaccggcgaccactc 5067098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 11757266 - 11757347
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtacca 104  Q
    |||||||||||| ||||||||||||||||||| || | | ||||| |||||||||||||| ||||||||||| |||||||||    
T  11757266 aagtcaagcacgcttaactgtggagttcttatggattgaactaccgaaaagaagatgcattttgttgatataagtagtacca 11757347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 20858522 - 20858614
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||   |||||| |||||||||||| |||| ||||||  ||||||||| |||||||||||||||||  | ||||||||||||    
T  20858522 ctccaagtcaagcaaccttaactatggagttcttatggaatgagctacagaaaagaagaagcatcttgttgatatagaaaataccaaacaatt 20858614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 30684537 - 30684629
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||  |||||| ||||||||||||||||||| |  | | ||||| ||||||||||||||||||||  ||||| |||||||||||||||    
T  30684537 ctccaagttgagcacgcttaactgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttatagatagtaccaaacaatt 30684629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 30719786 - 30719878
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||  |||||| |||| |||||||||||||| |  | | ||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  30719786 ctccaagttgagcacgcttaattgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttataggtagtaccaaacaatt 30719878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 4657979 - 4658064
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa 109  Q
    |||||||||| ||| ||||||| ||||||||| ||||   |||||||||||||||||||| |||||| ||||||||||| |||||||    
T  4657979 aagtcaagcatgat-aactgtgaagttcttatggaatggactaccaaaaagaagatgcatgttgttgttataggtagtatcaaacaa 4658064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 1880132 - 1880023
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgc 217  Q
    |||||||| |||| |||||||  |||  |||| ||||||||||||||||||| ||||  ||| |||| ||| ||||| |||| |||| |||||||| |||    
T  1880132 atgcagtcacataactgcacggtctcgagatccctctcattctggtgtgatttggtttgtctagaagttgttgggagtcactcattgtcgtgccttatgc 1880033  T
Q  218 accggcgacc 227  Q
    ||||||||||    
T  1880032 accggcgacc 1880023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 32574639 - 32574731
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||| || |||| ||||||  |  ||||||||||  ||||||||| |||||  |||||||||||||||||||||    
T  32574639 ctccaagtcaagcacgcttaactatgaagttattatagtttgggctaccaaaagaaagatgcattttgtttgtataggtagtaccaaacaatt 32574731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 4673469 - 4673544
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||| |||| |  |||||||||||| |||||||||||||||| ||||  ||||||| ||||    
T  4673469 ttaactgtggagttcttatggaatgaaataccaaaaagaatatgcatcttgttgatacaggtgctaccaaataatt 4673544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 16370732 - 16370781
Alignment:
Q  62 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  16370732 gctaccaaaaagaagatacgtcttgttgatataagtagtaccaaacaatt 16370781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 112
Target Start/End: Original strand, 39801498 - 39801536
Alignment:
Q  74 aagatgcatcttgttgatataggtagtaccaaacaattt 112  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  39801498 aagatgcatcttgttgatataggtagtaccaaacgattt 39801536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 111
Target Start/End: Original strand, 2058696 - 2058729
Alignment:
Q  78 tgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||||||||||||||||||    
T  2058696 tgcatcttgttgatataggtagtaccaaacaatt 2058729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 3887152 - 3887204
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||| |||||||| ||| |||||||||||||||||||| | ||||||||    
T  3887152 atgcagtcccatacctgtacggcctcaggatcactctcattccgatgtgattc 3887204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 8642129 - 8642181
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||    
T  8642129 atgcagtcccatacctgcacggccttaggatccctctcattctgatgtgattc 8642181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 22975105 - 22975157
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||| |||||||||||| |||||||||| ||||||||| | ||||||||    
T  22975105 atgcagtcacatacctgcacggcctcaggatccctctcattccgatgtgattc 22975157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 42429306 - 42429218
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||  |||||| || |||||||||  ||   |||||  ||||||| |||||| ||||||||| ||||||||||||||||||    
T  42429306 aagtcaagcacccttaactatgaagttcttatgtaacgggctacggaaaagaatatgcatattgttgataaaggtagtaccaaacaatt 42429218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 30719905 - 30719956
Alignment:
Q  123 gtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggtt 174  Q
    ||| ||||| ||||| ||||||||||| ||||||||||| ||||||||||||    
T  30719905 gtcccatacttgcacaacctcaggatccctctcattctgatgtgattcggtt 30719956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 30720242 - 30720276
Alignment:
Q  20 tccaagtcaagcacgattaactgtggagttcttat 54  Q
    |||||||||||||||||||||||| ||||||||||    
T  30720242 tccaagtcaagcacgattaactgtagagttcttat 30720276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 1821957 - 1821916
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattc 159  Q
    ||||||||||||||||||||||||| | |||| |||||||||    
T  1821957 atgcagtctcatacctgcacgaccttaagatctctctcattc 1821916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 5785901 - 5785954
Alignment:
Q  31 cacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatct 84  Q
    |||| ||||||||||||||||||  |||  |||||||||||||| |||||||||    
T  5785901 cacgcttaactgtggagttcttacggaacgagctaccaaaaagatgatgcatct 5785954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 8391409 - 8391478
Alignment:
Q  111 ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctg 180  Q
    |||||| ||| |||||||| ||| |||| |||||| ||| ||||||||| | |||||||||||| |||||    
T  8391409 ttcaatcatgtagtctcatgcctacacggcctcagaatccctctcattccgatgtgattcggtttctctg 8391478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 11160713 - 11160754
Alignment:
Q  70 aaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||| |||||||||||||| |||| |||||||||||||||    
T  11160713 aaagaatatgcatcttgttgacatagatagtaccaaacaatt 11160754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 24182277 - 24182318
Alignment:
Q  70 aaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||||||| ||||| |||||||||| ||||    
T  24182277 aaagaagatgcatcttgttggtatagatagtaccaaataatt 24182318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 2474010 - 2473958
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||||||| |||| ||||||| |||||| ||||||||| | ||||||||    
T  2474010 atgcagtctcatgcctgtacgaccttaggatccctctcattccgatgtgattc 2473958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 3886696 - 3886748
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||| ||||| || |||||||||||||| ||||||||| | ||||||||    
T  3886696 atgcagtcccatacttgtacgacctcaggatccctctcattccgatgtgattc 3886748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 22556587 - 22556535
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||| |||||||||||| |||||||| | ||||||||| | ||||||||    
T  22556587 atgcagtcccatacctgcacggcctcaggaaccctctcattccgatgtgattc 22556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 43356601 - 43356693
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||| ||| |||| |||| | ||||||| ||||||||    |||  ||||||||||||||| |||||| | ||||| |||||||||||||    
T  43356601 ctccaagccaaacacgtttaattatggagtttttatagaaaggtctaataaaaagaagatgcatattgttggtttaggttgtaccaaacaatt 43356693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 24 - 231
Target Start/End: Complemental strand, 10845043 - 10844821
Alignment:
Q  24 agtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------------ 111  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||                
T  10845043 agtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcttt 10844944  T
Q  112 ---tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgt 208  Q
       ||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||| |||    
T  10844943 ccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgt 10844844  T
Q  209 gccttgtgcaccggcgaccactc 231  Q
    |||||||||||||||||||||||    
T  10844843 gccttgtgcaccggcgaccactc 10844821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 22026544 - 22026317
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  22026544 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 22026445  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| ||||| || | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  22026444 gccttcattcaaccatgcagtcccatacctgcacggcctcacgaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 22026345  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | | ||||||||||||||||||||||||    
T  22026344 gtcatgccttgtgcaccggcgaccactc 22026317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 27926064 - 27925837
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  27926064 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 27925965  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  27925964 tccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 27925865  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||| ||||||||||    
T  27925864 gtcgtgccttgtgcaccagcgaccactc 27925837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 32292580 - 32292335
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |||| ||||||||||||||| ||||||||||||| ||||    
T  32292580 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatgggctagcaaaaagaagatgcaacttgttgatatagatagt 32292481  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  |||||||| ||||| |||||| |||||||| | ||||||||| ||||||||||||||||||| ||| |    
T  32292480 accaaacaattcttataagcattccttcaaccatgcagtcccatacttgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaaac 32292381  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||| || |||| |||||||||||||||||||| |||||    
T  32292380 tatcgggagccgctcattgtcgtgccttgtgcaccggcgatcactc 32292335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 33852221 - 33852466
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| |||| |||| ||||||||| ||||  ||||||||||||||||| ||||||||| |||||||||||    
T  33852221 tcacccatccaaagactactccaagtcaagcacgcttaattgtgaagttcttatggaatgggctaccaaaaagaagatacatcttgttaatataggtagt 33852320  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  || ||||||||||||||||||  ||| ||||| |||||||||||||||||||| |||||||| ||||     
T  33852321 accaaacaattcttataagttttccttcaaccatacagtctcatacctgcacggtctcgggatccctctcattctggtgtgattcagttcctcttgaagt 33852420  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||| || |||| ||||||||||||||||||||||||||    
T  33852421 tatcgggagccgctcattgtcgtgccttgtgcaccggcgaccactc 33852466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 22548976 - 22549203
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| |||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  22548976 ctccaagtcaagcacgcttaactgtggagtttttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 22549075  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||  ||||||||   ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  22549076 gtcttccttcaaccatgcagtcacatacctgcacagcctcaggaagcctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 22549175  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  22549176 gtcgtgccttgtgcaccggcgaccactc 22549203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 41659086 - 41659312
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    ||||||||||| |||| |||||||||||||||||||  ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||           
T  41659086 ctccaagtcaaacacgcttaactgtggagttcttatgtaatgagctatcgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 41659185  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            ||||  |||||||| |||||||||||||| |||||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||| |||    
T  41659186 gtcttccttcaaccatgcagtcccatacctgcacgacatcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcgggagccactcatt 41659285  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | |||| |||||||||||||||||||||    
T  41659286 gtcgtg-cttgtgcaccggcgaccactc 41659312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 8080311 - 8080550
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||    
T  8080311 atccaaagactactccaagtcaagcacgcttaactgtgaagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaa 8080410  T
Q  107 caat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    ||||               |||||  ||| |||| ||||||| |||| | |||||||| ||||||||| | |||||||| |||||||| ||||||||       
T  8080411 caattcttatcagctttccttcaaccatgtagtcccatacctacacggcttcaggatccctctcattccgatgtgattcagttcctctagaagctgttaa 8080510  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||| || |||| ||||||||||||||||||||||||||    
T  8080511 gagccgctcattgtcgtgccttgtgcaccggcgaccactc 8080550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 22548530 - 22548757
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| |||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  22548530 ctccaagtcaagcacgcttaactgtggagttattatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 22548629  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||  |||||||| | ||||||||| ||||||||| ||||||||| ||||||||| |||||| || |||    
T  22548630 aacttccttcaaccatgcagtcacatacctgcacagcctcaggaaccctctcattccggtgtgattaggttcctctagaagctgtcaggagccgctcatt 22548729  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    |  ||||||||||||| |||||||||||    
T  22548730 gtagtgccttgtgcactggcgaccactc 22548757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 6464873 - 6464983
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||||||    
T  6464873 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttgttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagt 6464972  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  6464973 accaaacaatt 6464983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 26 - 231
Target Start/End: Original strand, 28375042 - 28375262
Alignment:
Q  26 tcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-------------- 111  Q
    ||||||||| |||||| || || | |||| |||  ||||||| ||||||||||||||||||||||| |||||||||||||||||||                  
T  28375042 tcaagcacgcttaactatgaagctgttatggaaagagctaccgaaaagaagatgcatcttgttgatgtaggtagtaccaaacaattcttataagccttcc 28375141  T
Q  112 -tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgc 210  Q
     ||||| ||||||||||||||||||||| |||||||||| |||||||| |||||||||||| ||| ||| |||||||||||||||| || |||| |||||    
T  28375142 ttcaatcatgcagtctcatacctgcacggcctcaggatccctctcattatggtgtgattcgtttcgtctagaagctgtcgggagccgctaattgtcgtgc 28375241  T
Q  211 cttgtgcaccggcgaccactc 231  Q
    ||||||||||| |||||||||    
T  28375242 cttgtgcaccgacgaccactc 28375262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 27022319 - 27022546
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa--------- 109  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||| || |||| ||||||||| ||||||||||||||||||||||||||             
T  27022319 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctgccgaaaataagatgcatgttgttgatataggtagtaccaaacaattcttataa 27022418  T
Q  110 ------tttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
          ||||||  ||| |||| ||||||| || | ||||| |||| ||||||||| | |||||||||| |||||| |||||||||||||||| || |||    
T  27022419 gccttctttcaaccatgtagtcccatacctacatggcctcaagatccctctcattccgatgtgattcggctcctctagaagctgtcgggagccgctcatt 27022518  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  27022519 gtcgtgccttgtgcaccggcgaccactc 27022546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 28453515 - 28453277
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||| ||||  ||||||| ||||||||||||||||||| ||||||||||||  |||    
T  28453515 atccaaagactactccaagtcaagcacgcttaactgtagagttcttatggaatgggctaccataaagaagatgcatcttgttaatataggtagtataaaa 28453416  T
Q  107 caa---------------tttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    |||               ||||||  ||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| | || |||  ||| ||||||    
T  28453415 caattcttataagttttctttcaaccatgaagtctcatacctgcacgacctcgggatccctctcattccggtgtgattcag-tcatctaaaagttgtcgg 28453317  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||| || |||| |||||||||||||||||| |||||||    
T  28453316 gagccgctcattgtcgtgccttgtgcaccggcaaccactc 28453277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 12827235 - 12827462
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||            
T  12827235 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 12827334  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  | | |||| ||||||| || | |||||||||| ||||||||| || |||||||||||| ||| ||||| ||| |||||| || |||    
T  12827335 gccttccttcaaccaagtagtcccatacctacaaggcctcaggatccctctcattccggcgtgattcggttcttctagaagcagtcaggagccgctcatt 12827434  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | |||||||||||||||||||| |||||    
T  12827435 gtcgtgccttgtgcaccggcgatcactc 12827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 2044241 - 2043999
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||| |||| ||||  |||||||||||||| ||||||||||||||||||||||||    
T  2044241 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttattatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagt 2044142  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    | ||||||||               |||||  ||| |||||||||||| |||  |||||||||| ||||||||| | |||||||| |||||||| ||||     
T  2044141 atcaaacaattcttataagccttccttcaaccatgtagtctcatacctacacagcctcaggatccctctcattccgatgtgattctgttcctctagaagt 2044042  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgacca 228  Q
    |||||| ||||  | |||  ||||  |||||||||||||||||    
T  2044041 tgtcggaagccgttaattatcgtgttttgtgcaccggcgacca 2043999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 25144937 - 25144845
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  25144937 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgctgatataggtagtaccaaacaatt 25144845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 25147701 - 25147609
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  25147701 ctccaagtcaagcacgattaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagcaccaaacaatt 25147609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 41913147 - 41913043
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||| ||||||    
T  41913147 atccaaagactacttcaagtcaagcacgcttaactgcggagttcttatggaatgggctaccaaaaagaagacgcatcttgttgatataggtagcaccaaa 41913048  T
Q  107 caatt 111  Q
    |||||    
T  41913047 caatt 41913043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 22840493 - 22840602
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||| || |||||||||| ||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||    
T  22840493 tcacccatccaaagactaatctaagtcaagcatgatta-ctgtggagttcttatggaatgagctaacaaaaagaagatgcatcttgttgatatagatagt 22840591  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  22840592 accaaacaatt 22840602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 10844599 - 10844686
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa 109  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  10844599 caagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaa 10844686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 17103246 - 17103154
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||| ||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  17103246 ctccaagtcaagcacgcttaaccgtggagttcttatggaatgagctaccgaaaagaagatgcagcttgttgatataggcagtaccaaacaatt 17103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 12100856 - 12100766
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa 109  Q
    |||||||||||||||| ||||||||| |||||||||  ||| ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  12100856 ctccaagtcaagcacgcttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaa 12100766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 21316088 - 21316182
Alignment:
Q  17 tactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||||  |||||||||||||||||||  ||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  21316088 tactccaagtcaagcacacttaactgtggagttcttatgaaatgagctactgaaaagacgatgcatcttgttgatataggtagtaccaaacaatt 21316182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 34308460 - 34308549
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaca 108  Q
    ||||||| |||||||| |||| |||||||||||||| ||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  34308460 ctccaagccaagcacgcttaagtgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaaca 34308549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 25148128 - 25148040
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||  |||||||||||    
T  25148128 aagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtaagaccaaacaatt 25148040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 27819209 - 27819319
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||| ||||||| ||||||| |||  |||||||||||||| |||| |||| |||||   |||||||||||||| |||||||||||||||||    
T  27819209 tcacccatccaaatactactcaaagtcaaacacacttaactgtggagtttttatggaatgagctattgaaaagaagatgcattttgttgatataggtagt 27819308  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  27819309 accaaacaatt 27819319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 15818985 - 15819089
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||| |||||||||||||||||   ||||||||| ||||||||| ||||  |||||| ||||||||||||||| |||||||||| |||||||||||    
T  15818985 atccaaagcctactccaagtcaagcaaatttaactgtg-agttcttatggaatgtgctaccgaaaagaagatgcatcatgttgatatatgtagtaccaaa 15819083  T
Q  107 caattt 112  Q
    ||||||    
T  15819084 caattt 15819089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 31283636 - 31283719
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||  ||||||||||||||||||| ||||  |||||| |||||||||||||||||||| |||||||||||||||||    
T  31283636 aagtcaagcacacttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaa 31283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 15567533 - 15567629
Alignment:
Q  15 actactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||| |||||||||||| |||||||||||  ||| | ||||||||||||||||| ||||||||| |||| |||||  |||||||||    
T  15567533 actactccaagtcaaacacgattaactgcggagttcttatgaaatgaactaccaaaaagaagatgtatcttgttggtatatgtagtgtcaaacaatt 15567629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 27021904 - 27022091
Alignment:
Q  63 ctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt---------------tcaatgatgcagtctcatacctgcacgacctcagga 147  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||               ||||  ||||||||| |||||| || | ||||||||    
T  27021904 ctaccgaaaagaagatgcatcttgttgatataagtagtaccaaacaattcttataagccttccttcaaccatgcagtcttatacctacatggcctcagga 27022003  T
Q  148 tcactctcattct----ggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    || |||||||||     | |||||||||| |||||| |||| |||||||||||||| |||| ||||||||||||||| ||||||||||    
T  27022004 tccctctcattcattccgatgtgattcggctcctctagaagttgtcgggagccactcattgtcgtgccttgtgcacccgcgaccactc 27022091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 34308916 - 34309009
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttg----atataggtagtaccaaaca 108  Q
    ||||||| |||||||| ||||||||||||||||||| ||||  |||||| |||||||||||||||||||||    |||||||||||||||||||    
T  34308916 ctccaagccaagcacgcttaactgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatatatataggtagtaccaaaca 34309009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25307947 - 25307855
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatatag 95  Q
    ||||| ||||||||||||| |||||||||||| | |||||||||||||||||| |||||  ||||||||||  |||||| |||||||||||||||    
T  25307947 tcacccatccaaagactacaccaagtcaagcaagcttaactgtggagttcttacagaatgggctaccaaaa--aagatgtatcttgttgatatag 25307855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 3745262 - 3745177
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaca 108  Q
    |||||||||||| || ||||||||||| |||| ||||  ||||||||||||||||||||| |||||| |||||||||||| |||||    
T  3745262 aagtcaagcacgcttgactgtggagttattatggaatgggctaccaaaaagaagatgcatattgttggtataggtagtactaaaca 3745177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 1297184 - 1297080
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    ||||||||| |||| |||||||| |||  |||||| ||||||||||||| |||  | |||| ||||||| ||  ||||||||| ||||||||||||||||    
T  1297184 atccaaagattacttcaagtcaaacacacttaactatggagttcttatataatgggataccgaaaagaatataaatcttgttggtataggtagtaccaaa 1297085  T
Q  107 caatt 111  Q
    |||||    
T  1297084 caatt 1297080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 30527445 - 30527555
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||||| ||||| ||||||| ||   |||||||||||||||||||  |||  |||||| ||||||||||| ||||| ||||| || || ||    
T  30527445 tcacccatccaaagattactcaaagtcaaacaatcttaactgtggagttcttatgaaatgggctacccaaaagaagatgtatcttattgatgtaagtggt 30527544  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  30527545 accaaacaatt 30527555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 22705335 - 22705245
Alignment:
Q  10 caaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa 109  Q
    ||||||||||||||||||||||||| ||||||||        ||| ||||  | |||||||||||   ||||||||||||||||||||||||||||||||    
T  22705335 caaagactactccaagtcaagcacgcttaactgt--------tatggaatgggttaccaaaaaga---tgcatcttgttgatataggtagtaccaaacaa 22705247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 29971500 - 29971606
Alignment:
Q  122 agtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccg 221  Q
    |||||||||||| |||| ||||||||||  ||  |||||| |||||||| |||| |||  || ||||||||| ||||| |||||| |||||| |||||||    
T  29971500 agtctcatacctacacggcctcaggatccttccaattctgatgtgattcagttcgtctaaaaactgtcgggaaccactcattgccatgccttatgcaccg 29971599  T
Q  222 gcgacca 228  Q
    | |||||    
T  29971600 gtgacca 29971606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 22840624 - 22840737
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgc 217  Q
    ||| |||||||||||| ||   |||||||||| ||||||||| | |||||||| ||| |||| |||| | ||||||||| || |||  |||| ||| |||    
T  22840624 atgtagtctcatacctacaaagcctcaggatctctctcattccgatgtgattcagttactctagaagttatcgggagccgctcattatcgtgtcttatgc 22840723  T
Q  218 accggcgaccactc 231  Q
    ||||||||||||||    
T  22840724 accggcgaccactc 22840737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 6465014 - 6465118
Alignment:
Q  127 catacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgac 226  Q
    ||||||| |||| ||||| |||  |||||||||   ||||||||| || |||| |||| ||| ||||||| || |||  |||||||||||||||||||||    
T  6465014 catacctacacggcctcatgattcctctcattccaatgtgattcgattactctagaagttgttgggagccgctcattatcgtgccttgtgcaccggcgac 6465113  T
Q  227 cactc 231  Q
    |||||    
T  6465114 cactc 6465118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 112
Target Start/End: Complemental strand, 6466820 - 6466782
Alignment:
Q  74 aagatgcatcttgttgatataggtagtaccaaacaattt 112  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  6466820 aagatgcatcttgttggtataggtagtaccaaacaattt 6466782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 10729670 - 10729736
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgtt 88  Q
    |||| |||||||  |||| |||||||| ||||| ||||  |||||||||||||||||||||||||||    
T  10729670 caagccaagcacccttaattgtggagtccttatggaataggctaccaaaaagaagatgcatcttgtt 10729736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 6466378 - 6466330
Alignment:
Q  63 ctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||| ||||||||| ||||||| |||| ||||||||||||||||    
T  6466378 ctaccaaaaggaagatgcaacttgttggtataagtagtaccaaacaatt 6466330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 30334871 - 30334982
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaatt-agctaccaaaaagaagatgcatcttgttgatataggtag 99  Q
    ||||| ||||||| | || | |||||||| |||  |||||| || |||| |||| ||||| ||||| | ||||||||||| ||||||||| |||||||||    
T  30334871 tcacctatccaaataatatttcaagtcaaacacatttaactatgaagttattat-gaattgagctatcgaaaagaagatgtatcttgttggtataggtag 30334969  T
Q  100 taccaaacaattt 112  Q
    || ||||||||||    
T  30334970 tatcaaacaattt 30334982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 3744786 - 3744711
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| ||| ||||||||||  |||  ||||||||||||||| ||||| |||||| ||||||||||  |||||||||    
T  3744786 ttaattgtagagttcttatgaaatgtgctaccaaaaagaaggtgcatattgttggtataggtagtgtcaaacaatt 3744711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 15568035 - 15568078
Alignment:
Q  68 aaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||    
T  15568035 aaaaaaaagatgcatcttgttgatataggtcataccaaacaatt 15568078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 170
Target Start/End: Complemental strand, 25144830 - 25144771
Alignment:
Q  111 ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||| ||||| || |||||||||||||||||  |||| ||||||||||| ||||||||    
T  25144830 ttcaatcatgcaatcccatacctgcacgacctcgagatctctctcattctgatgtgattc 25144771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 34687995 - 34687920
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatata 94  Q
    ||||||||||  |||  |||||| |||| ||||||| |||| | ||||||||||||||||||||||| ||| ||||    
T  34687995 ctccaagtcagacacatttaactatggaattcttatggaataacctaccaaaaagaagatgcatctttttggtata 34687920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10729806 - 10729748
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaat 59  Q
    ||||| ||| ||||||||||||||||| | |||| |||| |||||||||||||| ||||    
T  10729806 tcacccatcaaaagactactccaagtctatcacgcttaattgtggagttcttatggaat 10729748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 17103132 - 17103091
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattc 159  Q
    ||||||||||||||||| ||| |||||||||| |||||||||    
T  17103132 atgcagtctcatacctgtacggcctcaggatctctctcattc 17103091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 17429611 - 17429578
Alignment:
Q  73 gaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||| |||||||||||||||||||||||||||    
T  17429611 gaagatacatcttgttgatataggtagtaccaaa 17429578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 27819341 - 27819397
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggtt 174  Q
    ||| |||||||||| |||| ||| ||| |||| ||||||||||| ||||||||||||    
T  27819341 atgaagtctcatacttgcatgacttcatgatccctctcattctgatgtgattcggtt 27819397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 28912848 - 28912904
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgata 92  Q
    |||||||||||||| |||||||||  | || |||||| |||||||||||||| ||||    
T  28912848 ttaactgtggagttattatagaatgggatatcaaaaataagatgcatcttgtcgata 28912904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32292124 - 32292092
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcac 33  Q
    ||||| |||||||||||||||||||||||||||    
T  32292124 tcacccatccaaagactactccaagtcaagcac 32292092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 44041933 - 44041885
Alignment:
Q  126 tcatacctgcacgacctcaggatcactctcattctggtgtgattcggtt 174  Q
    |||||||| ||| |||||| |||| ||||||||||| ||||||||||||    
T  44041933 tcatacctacacaacctcatgatccctctcattctgatgtgattcggtt 44041885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 18098 - 18342
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  18098 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaattagctaccaaaaa-aagatgcatcttgttgatataggtagt 18196  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    | ||||||||               |||||  ||| |||| ||||||| |||| |||||||||| ||||||||| | |||||||| |||||||| |||||    
T  18197 atcaaacaattcttataagtcttccttcaactatgtagtcacatacctacacggcctcaggatccctctcattccgatgtgattcagttcctctagaagc 18296  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| || |||| ||||||| ||||||| ||||||||||    
T  18297 tgtcgggagccgctcattgtcgtgcctggtgcaccagcgaccactc 18342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 17561 - 17806
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaatt-agctaccaaaaagaagatgcatcttgttgatataggtag 99  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||    
T  17561 tcacccatccaaagagtactccaagtcaagcacgcttaactgtggagttcttat-gaattgagctaccaaaaagaagatacatcctgttgatataggtag 17659  T
Q  100 taccaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaag 184  Q
    |||||||||||               |||||  ||| |||| ||||||| |||| |||||||||| ||||||||||| ||| ||||||||||||  ||||    
T  17660 taccaaacaattcttataagctttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcattctgatgtcattcggttcctcaagaag 17759  T
Q  185 ctgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
     ||||||||||| || |||| ||||||| ||||||||||||||||||    
T  17760 ttgtcgggagccgctcattgtcgtgcctggtgcaccggcgaccactc 17806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 17819 - 17887
Alignment:
Q  163 tgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||||||||| |||||||||||||||| || |||| ||||||| ||||||||||||||||||    
T  17819 tgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgcctcgtgcaccggcgaccactc 17887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 3e-53; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 41754454 - 41754227
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||            
T  41754454 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataa 41754355  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||||||||||||||||||||| ||||| || | ||||||||| |||||||||| |||||||| ||||||||| |||||| || |||    
T  41754354 gccttccttcaaccatgcagtctcatacctgcacggcctcaagaaccctctcattccggtgtgattcagttcctctagaagctgtcaggagccgctcatt 41754255  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  41754254 gtcgtgccttgtgcaccggcgaccactc 41754227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 25337978 - 25338205
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||| | ||||||||||||||||||||||||||||||||||| |||||||           
T  25337978 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 25338077  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            ||||  |||||||| ||||||||||||||||||||| | ||||||||| |||||||||| |||||||| ||||||||| |||||| || |||    
T  25338078 gccttccttcaaccatgcagtcccatacctgcacgacctcaggaaccctctcattccggtgtgattcagttcctctagaagctgtcaggagccgctcatt 25338177  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  25338178 gtcgtgccttgtgcaccggcgaccactc 25338205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 29804844 - 29804620
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat----------- 110  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||               
T  29804844 caagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcc 29804745  T
Q  111 ----ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgcc 206  Q
        |||||  ||| |||| ||||||| || | |||||||||| ||||||||| | ||||||||| ||||||| |||||||||||||||| || |||  |    
T  29804744 tgccttcaaccatgtagtcccatacctacaaggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcattatc 29804645  T
Q  207 gtgccttgtgcaccggcgaccactc 231  Q
    |||||||||||||||||||||||||    
T  29804644 gtgccttgtgcaccggcgaccactc 29804620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 231
Target Start/End: Complemental strand, 33175129 - 33174896
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat- 110  Q
    |||| ||||||||||||| |||| |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  33175129 aagaatactccaagtcaa-cacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 33175031  T
Q  111 --------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagcc 196  Q
                  |||||  ||| |||| ||||||| |||| |||||||||| ||||||||| | |||||||||| |  ||| |||| |||||||||||    
T  33175030 cttataagccttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtcgggagcc 33174931  T
Q  197 acttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||| |||| | ||||||||||||||||||||||||    
T  33174930 actcattgtcatgccttgtgcaccggcgaccactc 33174896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 1707224 - 1706980
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||| |||||||| |||  |||||||||||||||||||   ||  |||||||||||||||||||||||||||||||||||||||    
T  1707224 tcacccatccaaagactacttcaagtcaaacactcttaactgtggagttcttatgagatgggctaccaaaaagaagatgcatcttgttgatataggtagt 1707125  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||| ||| |||||||||||| |||   ||||||||| ||||||||| | ||||||||||||||||| |||      
T  1707124 accaaacaattcttataagtcttccttcaatcatgtagtctcatacctacacagtctcaggatc-ctctcattccgatgtgattcggttcctctagaaat 1707026  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| || |||| |||||||||||||||| |||||||||    
T  1707025 tgtcgggagccgctcattgtcgtgccttgtgcaccgacgaccactc 1706980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 15620081 - 15619836
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||||||||||| |||||||||||| |||| |||||||||||||| || |  | | |||||||||||||| ||||||||||||||||||||    
T  15620081 tcacccatccaaagactactcaaagtcaagcacgcttaattgtggagttcttatggattgggtttccaaaaagaagatgtatcttgttgatataggtagt 15619982  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  |||||||||||||| |||||| | || ||||| ||||||||||| ||| ||||||||| |||  ||||    
T  15619981 accaaacaattcttataagcttgccttcaactatgcagtctcatacttgcacggcatcgggatccctctcattctgatgtaattcggttcgtctataagc 15619882  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||| || |||| ||||||||||||||||||||||||||    
T  15619881 tatcgggagccgctcattgtcgtgccttgtgcaccggcgaccactc 15619836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 16379576 - 16379331
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  16379576 tcacccatccaaagattactccaagtcaaacacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagt 16379477  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  |||||||| |||||||||||| |||| ||||| |||||||||   | ||||||||||| | |  || |    
T  16379476 accaaacaattcgtataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggatccctctcattccaatttgattcggttcgtttataaac 16379377  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||| ||||||  || |||| ||||||||||||||||||||||||||    
T  16379376 tgttgggagctgctcattgtcgtgccttgtgcaccggcgaccactc 16379331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 25434019 - 25434264
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||  ||||||| |||| |||||||||||||||||| |||| ||    
T  25434019 tcacccatccaaagaccactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccagaaaggagatgcatcttgttgataaaggttgt 25434118  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    | ||||||||               |||||  ||| |||| |||||| ||||| |||||||||| ||||||||| ||||||||||||||| | | |||||    
T  25434119 atcaaacaattcttataagccttccttcaaccatgaagtcccataccagcacggcctcaggatccctctcattccggtgtgattcggttcgtttagaagc 25434218  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||| |||||| || |||| ||||||||||||||||||| ||||||    
T  25434219 tgtcaggagccgctcattgtcgtgccttgtgcaccggcggccactc 25434264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 16379120 - 16379010
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  16379120 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagt 16379021  T
Q  101 accaaacaatt 111  Q
    | |||||||||    
T  16379020 atcaaacaatt 16379010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 231
Target Start/End: Original strand, 18098876 - 18099086
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat---------------ttcaatgatg 120  Q
    |||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||               |||||  |||    
T  18098876 ttaactatggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaaccatg 18098975  T
Q  121 cagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcacc 220  Q
     |||||||||||| |||| |||||||||  ||||||||| | |||||||||||||||||  ||||||||||||||  || |||| |||||||||||||||    
T  18098976 tagtctcatacctacacggcctcaggattcctctcattccgatgtgattcggttcctctataagctgtcgggagctgctcattgtcgtgccttgtgcacc 18099075  T
Q  221 ggcgaccactc 231  Q
    ||||| |||||    
T  18099076 ggcgatcactc 18099086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 33771166 - 33770948
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttcaatga 118  Q
    |||||||||||||| | |||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||   || |    
T  33771166 ctccaagtcaagcatgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 33771067  T
Q  119 tgcagtc-tcatacctgca-----cgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgcct 212  Q
      |  || |||  ||||||       ||||||||| | ||||||||| |||||||||| |||||||| ||||||||| |||||| || |||| |||||||    
T  33771066 gcctttcttcaaccctgcagtcccatacctcaggaaccctctcattccggtgtgattcagttcctctagaagctgtcaggagccgctcattgtcgtgcct 33770967  T
Q  213 tgtgcaccggcgaccactc 231  Q
    |||||||||||||||||||    
T  33770966 tgtgcaccggcgaccactc 33770948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 8256691 - 8256464
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||            
T  8256691 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 8256592  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| || | | ||| |||| ||||||||| || |||||| | ||||||| |||||||||||||||| || |||    
T  8256591 gccttccttcaaccatgtagtcccatacctacaaggcttcaagatccctctcattccggcgtgatttgattcctctagaagctgtcgggagccgctcatt 8256492  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||| ||||    
T  8256491 gtcgtgccttgtgcaccggcgactactc 8256464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 231
Target Start/End: Complemental strand, 33174675 - 33174443
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||||  |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33174675 aagactactccaagtcaagcacgcttaactgcggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 33174576  T
Q  112 tcaatga-------------tgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccac 198  Q
       || |             || |||| ||||||| |||| | |||||||| ||||||||| | ||||||||||||| ||| |||||||||||||||| |    
T  33174575 cttataagccttccttcaactgtagtcccatacctacacggcatcaggatccctctcattccgatgtgattcggttcgtctagaagctgtcgggagccgc 33174476  T
Q  199 ttattgccgtgccttgtgcaccggcgaccactc 231  Q
    | |||| | ||||   |||||||||||||||||    
T  33174475 tcattgtcatgccccttgcaccggcgaccactc 33174443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 27882889 - 27883134
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||||||||||||||||||| |||| |||| |||||||||||||| |||    |||| |||||||||||||||||| ||||||||| || |    
T  27882889 tcacctatccaaagactactccaagtcaaacacgcttaattgtggagttcttatggaacggcctacaaaaaagaagatgcatcttattgatatagataat 27882988  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  |||||||||||||| |||||| |||||||||| ||||||||  ||||||||||||| | | | ||| |    
T  27882989 accaaacaattcttataagcattccttcaacaatgcagtctcatacatgcacggcctcaggatccctctcatttcggtgtgattcggtacgtgtagaatc 27883088  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    || |||||||| || |||| ||||||||||||||||||||||||||    
T  27883089 tgacgggagccgctcattgtcgtgccttgtgcaccggcgaccactc 27883134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 1912701 - 1912463
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  1912701 atccaaagagtactccaagtcaatcacgcttaactgtggagttcttatggaatgggctaccaaaa-gaagatgcatcttgttgatataggtagtaccaaa 1912603  T
Q  107 caa---------------tttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    |||               ||||||  ||| |||||||||||| ||  ||||||||||| ||||||||| | |||||||| ||||||||  ||||||| |     
T  1912602 caattcttataaatctactttcaaccatgtagtctcatacctacataacctcaggatccctctcattccgatgtgattcagttcctctaaaagctgttga 1912503  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||| || |||| ||| |||||||||| ||||| |||||    
T  1912502 gagccgctcattgtcgtaccttgtgcactggcgatcactc 1912463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 11388352 - 11388259
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattt 112  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11388352 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattt 11388259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38898875 - 38898985
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||||  |||  | |||||||||||| ||||||||||||||||||||||||    
T  38898875 tcacctatccaaagactactctaagtcaagcacgcttaactgtggagttcttatgaaatgtgttaccaaaaagaaaatgcatcttgttgatataggtagt 38898974  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  38898975 accaaacaatt 38898985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 30966855 - 30966763
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||| ||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30966855 ctccaagttaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 30966763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 15639917 - 15639678
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||||||| | || |  | | |||||||||||||| || |||||||||||||||||    
T  15639917 tcacccatccaaagactactccaagtcaagcacgcttaattgtggagttcttgtggattgggtttccaaaaagaagatgtatgttgttgatataggtagt 15639818  T
Q  101 accaaacaatttcaatga---tgcagtc------tcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    ||||||||||| | || |   |||  ||       ||||| | |||  |||| ||||| ||||||||||| ||| ||||||||| |||  ||||| ||||    
T  15639817 accaaacaattcctataagcgtgccttcaactatgcatacttccacagcctcgggatccctctcattctgatgtaattcggttcgtctataagctatcgg 15639718  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||| || |||| ||||||||||||||||||||||||||    
T  15639717 gagccgctcattgtcgtgccttgtgcaccggcgaccactc 15639678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 11394698 - 11394606
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattt 112  Q
    |||||||||||||||| ||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11394698 ctccaagtcaagcacgcttaactgtgaagttcttatggaat-agctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattt 11394606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 5399798 - 5399890
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||| || ||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5399798 ctccaagtcaagcacgcttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 5399890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 24818491 - 24818399
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  24818491 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaatt 24818399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 30966398 - 30966307
Alignment:
Q  20 tccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||| |||||| |||||||||||| |||| || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  30966398 tccaagtcaagcacgcttaactatggagttcttatggaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 30966307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 18448017 - 18448126
Alignment:
Q  122 agtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccg 221  Q
    |||| ||||||| |||| |||||||||| || |||||| | |||||||||||||||||  |||||||||||| || || |||| ||||||||||||||||    
T  18448017 agtcacatacctacacggcctcaggatccctatcattccgatgtgattcggttcctctaaaagctgtcgggaaccgctcattgtcgtgccttgtgcaccg 18448116  T
Q  222 gcgaccactc 231  Q
    ||||||||||    
T  18448117 gcgaccactc 18448126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 29259605 - 29259694
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattt 112  Q
    |||||||||||| |||||| || |||||||||  ||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  29259605 aagtcaagcacgcttaactatgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattt 29259694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 83181 - 83094
Alignment:
Q  20 tccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaac 107  Q
    ||||| |||| |||| |||||||| |||||||||| |||| |||||||||||| ||||| |||||||||| |||||||||||||||||    
T  83181 tccaaatcaaacacgcttaactgtagagttcttatggaatgagctaccaaaaaaaagattcatcttgttggtataggtagtaccaaac 83094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 30963703 - 30963793
Alignment:
Q  21 ccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||| |||||||||||||| |||| |  |  ||||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  30963703 ccaagtcaagcacgcttaactgtggagttattatggtttgggctaccagaaagaagatgcatcttgttgatataggtagaaccatacaatt 30963793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 13191136 - 13191047
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||   ||||| ||||||||||||| |||   ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  13191136 caagtcaagcacacataactatggagttcttataaaatggactaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaatt 13191047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 30963244 - 30963336
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaatt-agctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||||| || ||||||| || ||  ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  30963244 ctccaagtcaagcacgcttaactgttgaattcttat-gatttgggctaccaaaaataagatgcatcttgttgatataggtagtacctaacaatt 30963336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 174
Target Start/End: Complemental strand, 1953276 - 1953150
Alignment:
Q  63 ctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcagga 147  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||               |||||  ||||||||||||||||||||||| ||||||    
T  1953276 ctaccaaaaagaagatgcatctagttgatataggtagtaccaaacaattcttataggtcttccttcaaccatgcagtctcatacctgcacgacttcagga 1953177  T
Q  148 tcactctcattctggtgtgattcggtt 174  Q
    || ||||||||| | ||||||||||||    
T  1953176 tccctctcattccgatgtgattcggtt 1953150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 30961868 - 30961950
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaa 105  Q
    |||||||||||| ||||||||||||||||||| |  |  |||||| |||| || |||||||||||||||||||||||||||||    
T  30961868 aagtcaagcacgtttaactgtggagttcttatggtttcggctaccgaaaaaaatatgcatcttgttgatataggtagtaccaa 30961950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 8074055 - 8073965
Alignment:
Q  21 ccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||| | | ||| || ||||||||||||  |||  ||||| | |||||||||||||||||||| |||||||||||||||||||||    
T  8074055 ccaagtcaagaaggcttatctatggagttcttatgaaatgggctacaagaaagaagatgcatcttgttggtataggtagtaccaaacaatt 8073965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 18098667 - 18098769
Alignment:
Q  129 tacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgacca 228  Q
    ||||| |||| ||||||| |  ||||||||| | ||||||||| |||||||  ||||||||||||||| || | || |||||||||||||||||||| ||    
T  18098667 tacctacacggcctcagggttcctctcattccgatgtgattcgattcctctataagctgtcgggagccgctcaatgtcgtgccttgtgcaccggcgatca 18098766  T
Q  229 ctc 231  Q
    |||    
T  18098767 ctc 18098769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 16542151 - 16542058
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaa-gatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||| |||  |||||||| ||||| |||| |||| |||||  ||||| || ||| ||||||||||||||||||||||| ||||||||    
T  16542151 ctccaagtcaaacacatttaactgtagagtttttatggaatgagctataaaaaaaaaagatacatcttgttgatataggtagtacaaaacaatt 16542058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 20502176 - 20502096
Alignment:
Q  30 gcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||| |||| |||| |||||||||  |||  ||||||||||| |||| |||||||||||||||||  ||||||||||||||    
T  20502176 gcacgtttaattgtgaagttcttatgaaatgggctaccaaaaa-aagaagcatcttgttgatatagaaagtaccaaacaatt 20502096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 230
Target Start/End: Complemental strand, 16378988 - 16378877
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgc 217  Q
    |||||||||||||| |||||| |||| | ||| ||||||||| ||||||| ||||||| |||  || ||||  ||| || || |||| |||| ||| |||    
T  16378988 atgcagtctcatacttgcacggcctcggaatccctctcattccggtgtga-tcggttcatctataaactgttaggaaccgctcattgtcgtgtcttatgc 16378890  T
Q  218 accggcgaccact 230  Q
    |||||||||||||    
T  16378889 accggcgaccact 16378877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 9909214 - 9909171
Alignment:
Q  62 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaa 105  Q
    ||||||||||||||| || ||||||||| |||||||||||||||    
T  9909214 gctaccaaaaagaagttgaatcttgttggtataggtagtaccaa 9909171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 32377697 - 32377756
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagat 78  Q
    |||||||||||||| | ||||||||||||||||| | |||| ||||||| |||| |||||    
T  32377697 ctccaagtcaagcatgcttaactgtggagttcttttggaatgagctaccgaaaacaagat 32377756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 111
Target Start/End: Original strand, 8181394 - 8181424
Alignment:
Q  81 atcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||||||||||||||||||    
T  8181394 atcttgttgatataggtagtaccaaacaatt 8181424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 11388235 - 11388179
Alignment:
Q  122 agtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctct 179  Q
    |||||||||||| |||| | |||||||| ||||||||| | |||||||||||||||||    
T  11388235 agtctcatacctacacggcatcaggatc-ctctcattccgatgtgattcggttcctct 11388179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 18447954 - 18447991
Alignment:
Q  74 aagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  18447954 aagatgcatcttgttgatacaagtagtaccaaacaatt 18447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 37552726 - 37552640
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||| | ||||||||||| ||||||  ||||  ||| |||||||||||| ||||| | ||| |||| ||||||||||||||||    
T  37552726 aagtcaagcatgcttaactgtggaattcttacggaatgcgctgccaaaaagaaga-gcatcattttg-tatatgtagtaccaaacaatt 37552640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 1e-52; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 17851095 - 17850857
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||||||||||    
T  17851095 atccgaagactactccaagtcaagcacgcttaactgtggagttcttatagaatgggctaccagaaagaagatgcatcttgttgataaaggtagtaccaaa 17850996  T
Q  107 ca---------------atttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    ||                ||| ||  |||||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||| |||| ||||||    
T  17850995 catatcttatcagcattcttttaaccatgcagtcccatacttgcacgacctcaggatccctctcattccggtgtgattcggttcgtctagaagttgtcgg 17850896  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccact 230  Q
     |||| || |||| |||||||||||||||||||||||||    
T  17850895 aagccgctaattgtcgtgccttgtgcaccggcgaccact 17850857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 20850486 - 20850259
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||||||||||||||| |||||||| |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||           
T  20850486 ctccaagtcaagcacgcttaactgtagagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacaaaacaattcttataa 20850387  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            ||||  |||||||| |||||||||||| ||||| || | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  20850386 gccttccttcaaccatgcagtcccatacctgcacggcctcatgaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 20850287  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  20850286 gtcgtgccttgtgcaccggcgaccactc 20850259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 11062468 - 11062224
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  11062468 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagt 11062369  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    || ||||| |               |||||  ||| ||| |||||||| |||  |||||||||| |||||||   | ||||||||||||||||| ||| |    
T  11062368 acaaaacacttcttataagccttccttcaaccatgtagtttcatacctacacagcctcaggatc-ctctcatgtcgatgtgattcggttcctctagaaac 11062270  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| || |||| ||||||||||||||||| ||||||||    
T  11062269 tgtcgggagccgctcattgtcgtgccttgtgcaccggtgaccactc 11062224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 2720526 - 2720772
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctacc-aaaaagaagatgcatcttgttgatataggtag 99  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||| ||||||| ||||| ||||||  ||||||| ||||||||||    
T  2720526 tcacccatccaaagactactccaagtcaagcacacttaactgtggagttcttatggaatgagctaccaaaaaaaaagatgtgtcttgttaatataggtag 2720625  T
Q  100 taccaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaag 184  Q
    |||||||||||               |||||  |||||||||||||||||||||||||  ||||| ||||||||| ||| ||||| ||||| ||| ||||    
T  2720626 taccaaacaattcttataagtcttccttcaaccatgcagtctcatacctgcacgaccttgggatccctctcattccggtatgatttggttcgtctagaag 2720725  T
Q  185 ctgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||| | || | || |||| |||| |||||||||||||||||||||    
T  2720726 ctgtccgaagtcgctcattgtcgtgacttgtgcaccggcgaccactc 2720772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 6330875 - 6331120
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    |||||||||  |||| ||||| |||||||||||| |||||||||||||||||||  ||| ||||||| |||||||||||||| |||||||||||||||||    
T  6330875 tcaccaatcataagaatactcaaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatattgttgatataggtagt 6330974  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  ||| |||||||||||| |||| ||||||||||  |||||||| | |||||||||| |  ||| ||||     
T  6330975 accaaacaattcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatccatctcattccgatgtgattcggcttgtctagaagt 6331074  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| || |||| | ||||||||||||||||||||||||    
T  6331075 tgtcgggagccgctcattgtcatgccttgtgcaccggcgaccactc 6331120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 17851557 - 17851313
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||| ||||||||||||||||||||||| |||| |||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  17851557 tcacccatccgaagactactccaagtcaagcacgcttaattgtggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgataaaggtagt 17851458  T
Q  101 accaaaca---------------atttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||                ||| ||  |||||||| ||||| |||||| |||| ||||| ||||||||| ||||||||||||||| ||| ||||     
T  17851457 accaaacatatcttataagccttcttttaaccatgcagtcccatacttgcacggcctcgggatccctctcattccggtgtgattcggttcgtctagaagt 17851358  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccact 230  Q
    ||||   |||| || |||  |||||||||||||||||||| ||||    
T  17851357 tgtctaaagccgctaattatcgtgccttgtgcaccggcgaacact 17851313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 231
Target Start/End: Original strand, 2681206 - 2681424
Alignment:
Q  28 aagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat---------------tt 112  Q
    ||||||| |||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||               ||    
T  2681206 aagcacgcttaattgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatgggtagtaccaaacaattcttataagtcttcatt 2681305  T
Q  113 caatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgcct 212  Q
    |||  |||||||| || |||| |||| |||||||| | ||||||||| ||||||||||||||||||| ||| ||||| |||||| || |||| |||||||    
T  2681306 caaccatgcagtcccaaacctacacggcctcaggaaccctctcattccggtgtgattcggttcctctagaaactgtcaggagccgctcattgtcgtgcct 2681405  T
Q  213 tgtgcaccggcgaccactc 231  Q
    |||| ||||||||||||||    
T  2681406 tgtgtaccggcgaccactc 2681424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 3652634 - 3652424
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt---------------tcaatgatg 120  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| || ||||||               ||||  |||    
T  3652634 ttaactgtggagttcttatggaatgaactaccaaaaagaagatgcatcttgttgatataggtagtatcagacaattcttataagccttccttcaaccatg 3652535  T
Q  121 cagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcacc 220  Q
     |||| ||||||| |||  |||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||| || |||| |||||||||||||||    
T  3652534 tagtcccatacctacacagcctcaggatccctctcattccgatgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcacc 3652435  T
Q  221 ggcgaccactc 231  Q
    | |||||||||    
T  3652434 gacgaccactc 3652424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 230
Target Start/End: Complemental strand, 21312143 - 21311910
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat- 110  Q
    |||||| |||||||||||||||| |||||| |||| |||||||  |||  |||||||||||||||||||||||||||||||||||||||||| ||||||     
T  21312143 aagactgctccaagtcaagcacgtttaactatggatttcttatgaaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacctaacaatt 21312044  T
Q  111 --------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagcc 196  Q
                  |||||  ||||||||||||||||||||  ||||| || | |||||||||||||||||||| |||||| | |||||| ||||||| |    
T  21312043 cttataagccttccttcaaccatgcagtctcatacctgcacagcctcatgaaccctctcattctggtgtgattcagttcctttagaagctatcgggagtc 21311944  T
Q  197 acttattgccgtgccttgtgcaccggcgaccact 230  Q
     || ||||  ||||||||||||| ||||||||||    
T  21311943 gctcattgttgtgccttgtgcactggcgaccact 21311910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 23986298 - 23986525
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||||||||||||||  ||||||||| ||||||||| |  | ||||||| |||||||||||||||||||| ||||||||||||||||||||||           
T  23986298 ctccaagtcaagcacacttaactgtgaagttcttatggtttgagctaccgaaaagaagatgcatcttgttcatataggtagtaccaaacaattcttataa 23986397  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            ||||  ||| |||| ||||||| |||| |||| ||||| ||||||||| | ||||||||||||||||| |||||||||||||||| || |||    
T  23986398 gcctaccttcaaccatgtagtcccatacctacacggcctccggatccctctcattccgatgtgattcggttcctctagaagctgtcgggagccgctcatt 23986497  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | | |||||||||||||| |||||||||    
T  23986498 gtcatgccttgtgcaccgacgaccactc 23986525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 16520133 - 16520043
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa 109  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16520133 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaa 16520043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 20896669 - 20896896
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    ||||||| |||||||| ||||| ||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||            
T  20896669 ctccaagccaagcacgcttaaccgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20896768  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||||||||||| |||| ||| |||||| ||||||||| | |||||||||| |  ||| |||| ||||||||||| || |||    
T  20896769 gccttccttcaaccatgtagtctcatacctacacggcctaaggatccctctcattccgatgtgattcggcttgtctagaagttgtcgggagccgctcatt 20896868  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | | ||||||||||| ||||||||||||    
T  20896869 gtcatgccttgtgcaacggcgaccactc 20896896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 13492497 - 13492405
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || |||||||||    
T  13492497 ctccaagtcaagcacgcttaactgtggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatataggtaatatcaaacaatt 13492405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 13492950 - 13492862
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13492950 aagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 13492862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 9352227 - 9352137
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa 109  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  9352227 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaa 9352137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 231
Target Start/End: Original strand, 20126154 - 20126390
Alignment:
Q  10 caaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa 109  Q
    ||||||||||||||||||||||||| |||| |||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||| ||||| |    
T  20126154 caaagactactccaagtcaagcacgcttaattgtggaattcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacca 20126253  T
Q  110 t---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggag 194  Q
    |               |||||  ||| |||||||||||| |||  ||| |||||| ||||||||| | |||||||| | |  ||| |||| |||| ||||    
T  20126254 ttcttataagccttccttcaaccatgtagtctcatacctacacagccttaggatccctctcattccgatgtgattcagcttgtctagaagttgtcaggag 20126353  T
Q  195 ccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    || || |||| | ||||||||||||||||||||||||    
T  20126354 ccgctcattgtcatgccttgtgcaccggcgaccactc 20126390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 14771688 - 14771927
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    ||||||||||||||||| ||| |||||  ||||||||||||||||||| ||||    |||||||||||| ||| ||||||||||||||||||||||||||    
T  14771688 atccaaagactactccacgtctagcacacttaactgtggagttcttatggaatagattaccaaaaagaatatggatcttgttgatataggtagtaccaaa 14771787  T
Q  107 caat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    ||||               |||||  |||||||||||||||| |||| | || ||||| ||||||||| || |||||||| ||| ||  |||||||||||    
T  14771788 caattcttataagtcttccttcaaccatgcagtctcatacctacacggcttcgggatccctctcattccggcgtgattcgcttcatcaagaagctgtcgg 14771887  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||| | || |||| ||||||||| |||||||||| |||||    
T  14771888 gagtcgctcattgtcgtgccttgcgcaccggcgatcactc 14771927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 7912043 - 7911951
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||| |  |||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7912043 ctccaagtcaagcaagcataactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 7911951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 7912475 - 7912383
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||| |||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  7912475 ctccaagtcaagcacgtttaactatggagttcttatggaatgagctaccgaaaagaaaatgcatcttgttgatataggtagtaccaaacaatt 7912383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 13191494 - 13191586
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||| ||||||||| |||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13191494 ctccaagtcaagcacgcttaactgtgaagttcttatggaacgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 13191586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 17027512 - 17027604
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  17027512 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaatt 17027604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 27334301 - 27334105
Alignment:
Q  44 ggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat---------------ttcaatgatgcagtctca 128  Q
    ||||||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||               |||||  |||||||  ||    
T  27334301 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27334202  T
Q  129 tacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcga 225  Q
    ||||||||||||||||||| | ||||| ||| |||||||||| ||||||||  ||||||| ||||| |  | |||| ||||||||||||||||||||    
T  27334201 tacctgcacgacctcaggaaccctctcgttccggtgtgattcagttcctctataagctgttgggagtcgttcattgtcgtgccttgtgcaccggcga 27334105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 27395041 - 27394845
Alignment:
Q  44 ggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat---------------ttcaatgatgcagtctca 128  Q
    ||||||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||               |||||  |||||||  ||    
T  27395041 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27394942  T
Q  129 tacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcga 225  Q
    ||||||||||||||||||| | ||||| ||| |||||||||| ||||||||  ||||||| ||||| |  | |||| ||||||||||||||||||||    
T  27394941 tacctgcacgacctcaggaaccctctcgttccggtgtgattcagttcctctataagctgttgggagtcgttcattgtcgtgccttgtgcaccggcga 27394845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 3653030 - 3652917
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgc 217  Q
    |||||||| ||||||| |||  |||||||||| ||||||||| | ||||| ||||||| ||| |||||||||||||||| || |||| ||||||||||||    
T  3653030 atgcagtcccatacctacacagcctcaggatccctctcattccgatgtgagtcggttcatctagaagctgtcgggagccgctcattgtcgtgccttgtgc 3652931  T
Q  218 accggcgaccactc 231  Q
    ||||||||||||||    
T  3652930 accggcgaccactc 3652917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 231
Target Start/End: Complemental strand, 21311687 - 21311453
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat- 110  Q
    |||||||||| |||||||||||| ||||||| ||||||||||| |||| |||| |||||||||||||| |||||||| || |||||| |||||||||||     
T  21311687 aagactactcaaagtcaagcacgcttaactgcggagttcttatggaatgagcttccaaaaagaagatggatcttgtttatctaggtaataccaaacaatt 21311588  T
Q  111 --------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagcc 196  Q
                  |||||  |||||||| ||||| || ||| ||||| || | ||||||||| | ||||||||| || |||| |||||| ||| || ||    
T  21311587 cttataaggcttccttcaaccatgcagtcccatacttgtacggcctcatgaaccctctcattccgatgtgattcgttttctctagaagctttcgagaacc 21311488  T
Q  197 acttattgccgtgccttgtgcaccggcgaccactc 231  Q
     || |||| ||| ||||||||||||||||||||||    
T  21311487 tctcattgtcgttccttgtgcaccggcgaccactc 21311453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 17731090 - 17731186
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgc----atcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||| ||||||||||||| ||||| ||||||| ||||||||||||    |||||||||||||||||||||||||||||||    
T  17731090 ctccaagtcaagcacgcttaaatgtggagttcttaaagaatgagctaccgaaaagaagatgcatctatcttgttgatataggtagtaccaaacaatt 17731186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 15929735 - 15929655
Alignment:
Q  31 cacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| ||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  15929735 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaataatt 15929655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 228
Target Start/End: Original strand, 2890823 - 2891042
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat----------- 110  Q
    ||||||||||||| ||||||||||||||||||| ||||  |||||  ||||||||| ||||||| |||||||||||||| || ||||||               
T  2890823 caagtcaagcacgcttaactgtggagttcttatggaatgggctactgaaaagaagaagcatctttttgatataggtagtccctaacaattcttataaacc 2890922  T
Q  111 ----ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgcc 206  Q
        |||||  |||||||| |||||||||||| |||| ||||| ||||||||||  ||||||||| ||||||| ||| ||||| |||||| || |||| |    
T  2890923 ttccttcaaccatgcagtcccatacctgcacggcctcgggatc-ctctcattctaatgtgattcgattcctctagaa-ctgtcaggagccgctcattgtc 2891020  T
Q  207 gtgccttgtgcaccggcgacca 228  Q
    ||| ||||||||||||| ||||    
T  2891021 gtggcttgtgcaccggcaacca 2891042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 23776605 - 23776379
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||| ||| |||| |||| |||||||||  ||| ||||||| |||||||||||||||||||||||||||||||||||| || ||            
T  23776605 ctccaagtcaagtacgcttaa-tgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccagacgattcttataa 23776507  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| || | |||||||||  ||||||||| || ||||||| |||||||| ||||||||||| |||| || |||    
T  23776506 gtcttccttcaaccatgtagtcccatacctacaaggcctcaggatacctctcattccggcgtgattcagttcctctagaagctgtcggaagccgctcatt 23776407  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||| |||||| || ||||||||||||    
T  23776406 gtcgtaccttgtacatcggcgaccactc 23776379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33774965 - 33775077
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgca--tcttgttgatataggta 98  Q
    ||||| |||||||||||||| |||||||| |||  ||||||||||||||||||| ||||   ||| |||||||||||||||  |||||||||||||||||    
T  33774965 tcacccatccaaagactactgcaagtcaaacacacttaactgtggagttcttatggaatggactatcaaaaagaagatgcatctcttgttgatataggta 33775064  T
Q  99 gtaccaaacaatt 111  Q
    | |||| ||||||    
T  33775065 gcaccagacaatt 33775077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 20735872 - 20735768
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||| |||||||||| ||| |||  |||||| ||||||| |||||||||   ||||| |||||||||||||||||||||||||| |||||| ||||    
T  20735872 atccaaaggctactccaagccaaccacacttaactatggagtttttatagaatggactaccgaaaagaagatgcatcttgttgatataagtagtatcaaa 20735773  T
Q  107 caatt 111  Q
    |||||    
T  20735772 caatt 20735768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9440272 - 9440382
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||| | | |||||| ||||||||  ||||||||| ||||||||| || | ||||||| ||||||| |||||||||||||||||| |||||    
T  9440272 tcacccatccaaaaattgctccaaatcaagcacacttaactgtgaagttcttatggagtgagctaccgaaaagaaaatgcatcttgttgatataagtagt 9440371  T
Q  101 accaaacaatt 111  Q
    ||| |||||||    
T  9440372 accgaacaatt 9440382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1991736 - 1991626
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||| |||||||||| ||||  | | ||||||||| |||||||||  ||| ||||||| |||||||||||||||||||| | ||| ||| |    
T  1991736 tcacccatccaaaaactactccaaatcaataatgtttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgtttagatatgtaat 1991637  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  1991636 accaaacaatt 1991626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 28780275 - 28780209
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatctt 85  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||| ||||||||||||    
T  28780275 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 28780209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2891256 - 2891340
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatctt 85  Q
    ||||| |||||||||||||||||| ||||||||  |||||||||||||| |||| ||||  ||||||||||  ||||||||||||    
T  2891256 tcacccatccaaagactactccaaatcaagcacatttaactgtggagtttttatggaatgggctaccaaaacaaagatgcatctt 2891340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 20732751 - 20732651
Alignment:
Q  11 aaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat 110  Q
    |||||||||||||||||||||||  ||||| || ||||| |||| ||||  |||||| ||||||| |||||| || || ||||||||||||||||| |||    
T  20732751 aaagactactccaagtcaagcactcttaaccgtagagtttttattgaatgggctaccgaaaagaatatgcatattattaatataggtagtaccaaataat 20732652  T
Q  111 t 111  Q
    |    
T  20732651 t 20732651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 28065820 - 28065911
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaa---gatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||| || | |||| |||||||||||||| |||| |||||||||||| ||   ||||||||||||||||| || |||||||||||||||    
T  28065820 aagtcaaacatgcttaattgtggagttcttatggaataagctaccaaaaaaaaaaagatgcatcttgttgatagagatagtaccaaacaatt 28065911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 31821704 - 31821765
Alignment:
Q  50 cttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  31821704 cttatggaatgagctaccaaaaaaaagatgcatcttgttgatatagttagtaccaaataatt 31821765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 12194493 - 12194406
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    ||||| ||||| || | ||||||||||||||||||| |||| |  ||  |||||||||||||||||||||||||||| |||| |||||    
T  12194493 ctccatgtcaaacatgcttaactgtggagttcttatggaatgaattataaaaaagaagatgcatcttgttgatatagatagtgccaaa 12194406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 15929338 - 15929272
Alignment:
Q  45 gagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||| |||| ||||||| ||||||| ||||||||| |||||||||| | ||||||||||||    
T  15929338 gagttcttatggaatgagctaccgaaaagaatatgcatcttattgatataggcattaccaaacaatt 15929272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 17205505 - 17205412
Alignment:
Q  17 tactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||| ||||||| | |||||  |||||||||||| ||||  ||||||||||  |||||| ||||||||| || ||||||||||||||||||    
T  17205505 tactccaaatcaagcatgtttaacaatggagttcttatggaatgggctaccaaaac-aagatgaatcttgttggtaaaggtagtaccaaacaatt 17205412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3652706 - 3652658
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagtt 49  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  3652706 tcacccatccaaagactactccaagtcaagcaagcttaactgtggagtt 3652658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 3885071 - 3885160
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| | |||| || ||||||||| |||| ||||||||||   |||||| || |||||  |||| ||||||||||||||||    
T  3885071 ctccaagtcaagcacgttcaactttgaagttcttatggaataagctaccaaa---aagatgtattttgttagtatatgtagtaccaaacaatt 3885160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 30729847 - 30729913
Alignment:
Q  46 agttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattt 112  Q
    |||||||||||||||  ||||| ||||||||||  ||| |||| ||||| |||||||||||||||||    
T  30729847 agttcttatagaattgactacccaaaagaagatcaatcatgtttatatacgtagtaccaaacaattt 30729913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 31821787 - 31821860
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    ||| |||||||||||| || | ||||| |||| ||||||||| | |||||||||||| |||| |||||||||||    
T  31821787 atgtagtctcatacctacatggcctcatgatccctctcattccgatgtgattcggtttctctagaagctgtcgg 31821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 9440404 - 9440459
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggt 173  Q
    |||||||  |||||||||||||| |||||||| ||||||||| | |||||||||||    
T  9440404 atgcagttccatacctgcacgacttcaggatccctctcattccgatgtgattcggt 9440459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 10964447 - 10964377
Alignment:
Q  41 tgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||| |||| || | ||||||||||||||| ||  || || |||||||| ||||||||||||||||    
T  10964447 tgtggagtttttatggattaagctaccaaaaagaatatttattttattgatatatgtagtaccaaacaatt 10964377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 33470998 - 33470916
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaa 105  Q
    ||||||| ||||  |||||||||| |||||||  ||| | |||| |||||||| ||||||||||||  |||||||| ||||||    
T  33470998 aagtcaaacacgcataactgtggaattcttatgtaatgaactacaaaaaagaatatgcatcttgttagtataggtaataccaa 33470916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3653085 - 3653052
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacg 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  3653085 tcacccatccaaagactactccaagtcaagcacg 3653052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 32293044 - 32292958
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||  || |||||| |||||||||||||  ||  | ||| ||||| |||||| || |||||| |||||||||||||||||||||    
T  32293044 aagtcaagttcgcttaactatggagttcttata--atgtgttactaaaaacaagatgtattttgttggtataggtagtaccaaacaatt 32292958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 9440527 - 9440575
Alignment:
Q  122 agtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||| |||||||||||||| |||||||| ||||||||| | ||||||||    
T  9440527 agtcccatacctgcacgacttcaggatccctctcattccgatgtgattc 9440575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 9440842 - 9440930
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||| |||  ||||||||| ||||||||| |  |  |||||  ||||||| |||||||||||||||| | ||||||||||| ||||    
T  9440842 aagtcaaacacacttaactgtgaagttcttatggtttgggctactgaaaagaaaatgcatcttgttgataaaagtagtaccaaagaatt 9440930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 230
Target Start/End: Original strand, 33775099 - 33775211
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgc 217  Q
    |||| ||| ||||| |||||| ||||  ||||||||||||||  |||||||||| ||  | | ||| |||| ||||||  || |||  ||||||||||||    
T  33775099 atgcggtcacatacttgcacggcctcgcgatcactctcattccagtgtgattcgttttgtgtagaaactgttgggagctgctcattatcgtgccttgtgc 33775198  T
Q  218 accggcgaccact 230  Q
    |||| ||||||||    
T  33775199 accgacgaccact 33775211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 5e-52; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 37045218 - 37044973
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  | |||||||||||||||||| |||||||||||||||| |    
T  37045218 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatagggtaccaaaaagaagatgcaccttgttgatataggtatt 37045119  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||| | ||| |||| || |||| |||| |||||||||| ||||||||| | ||||||||||||||||| |||||    
T  37045118 accaaacaattcttataagcattccttcattcatgtagtcccacacctacacggcctcaggatccctctcattcagatgtgattcggttcctctagaagc 37045019  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| || |||| ||||||||||||||||| ||||||||    
T  37045018 tgtcgggagccgctcattggcgtgccttgtgcaccggtgaccactc 37044973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 28561911 - 28561684
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  28561911 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 28561812  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||||| |||||||| | ||||||||| |||||||||| |||||||| |||| |||| | |||| || |||    
T  28561811 gccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcagttcctctagaagttgtcagtagccgctcatt 28561712  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  28561711 gtcgtgccttgtgcaccggcgaccactc 28561684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 30529870 - 30529625
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| |||||| || ||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  30529870 tcacccatccaaagactactccaagtcaagcacgcttaactatgaagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagt 30529771  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    |||||| |||               |||||  ||| |||||||||||| |||  |||||||||| ||||||||| | |||||||| |||||||| ||||     
T  30529770 accaaaaaattcttataagccttacttcaaccatgtagtctcatacctacacagcctcaggatccctctcattccgatgtgattcagttcctctagaagt 30529671  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||  ||||||| |||||||||||||| | |||||||||    
T  30529670 tgtcgggagctgcttattgtcgtgccttgtgcactgacgaccactc 30529625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 39641120 - 39640875
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||    
T  39641120 tcaccaatccaaagactgctccaagtcaaacacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttattgatataggtagt 39641021  T
Q  101 accaaacaa---------------tttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    |||||||||                |||||  ||| |||||||||||| |||| |||||||||| ||||||||||| ||||||||| ||| |||  ||||    
T  39641020 accaaacaactcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatctctctcattctgatgtgattcgattcttctaaaagc 39640921  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||||||||||  | |||| | || ||||||||||| |||||||||    
T  39640920 tgtcgggagccgttcattgtcatgtcttgtgcaccgacgaccactc 39640875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 2911272 - 2911033
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| || ||||    
T  2911272 atccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccaaaaagaatatgcatcttgttgatataggtaatatcaaa 2911173  T
Q  107 caa---------------tttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgg 191  Q
    |||               ||||||  |||  ||| |||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||| ||||||||  |    
T  2911172 caatttttataaccattctttcaaccatgtggtcccatacctgcacggcctcgggatccctctcattcaggtgtgattcggttcgtctagaagctgttag 2911073  T
Q  192 gagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    || || ||||||  |||| |||||||||||||||||||||    
T  2911072 gatccgcttattatcgtgtcttgtgcaccggcgaccactc 2911033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 14814114 - 14813887
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||  ||||||| ||||||||||||||||| ||||||||||||||||||||||||            
T  14814114 ctccaagtcaagcacgcttaactgtggagttcttatggaacgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaattattataa 14814015  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           || ||  |||||||||||||||| |||| |||||||| | ||||||||| ||||||||||||||||||| |||||| || | |||| || |||    
T  14814014 gccttcctttaaccatgcagtctcatacctacacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctctcagaagccgctaatt 14813915  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  14813914 gtcgtgccttgtgcaccggcgaccactc 14813887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 39653329 - 39653102
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||||||||||||||  |||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||| | |||||||           
T  39653329 ctccaagtcaagcacacttaactgtggagttctcatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtatccaacaattcttataa 39653230  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            ||||  |||||||| |||||||||||| |||||||| | ||||||||| |||||||||| |||||||| ||||||||| |||||| || |||    
T  39653229 gctttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcagttcctctagaagctgtcaggagccgctcatt 39653130  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  39653129 gtcgtgccttgtgcaccggcgaccactc 39653102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 50347911 - 50347684
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||            
T  50347911 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 50347812  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  | | |||||||||| | || | |||||||||| ||||||||| || |||||||||||||||| |||||||||||||||| || |||    
T  50347811 gccttccttcaaccaagtagtctcatacatacaaggcctcaggatccctctcattccggcgtgattcggttcctctagaagctgtcgggagccgctcatt 50347712  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||| |||||||||||||||| |||||    
T  50347711 gtcgttccttgtgcaccggcgatcactc 50347684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 4067329 - 4067434
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4067329 atccaaagactactccaagtcaagcacgcttaactgtggagttcttatgtaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 4067428  T
Q  107 caattt 112  Q
    ||||||    
T  4067429 caattt 4067434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 16811546 - 16811319
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||| ||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||| ||||||            
T  16811546 ctccaagtcaagcacgcttaactgtggaattcttatggaatgagctaccgaaaagaagatgcatcttgttgaaataggtagtacccaacaattcttataa 16811447  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| || |||| |||| |||||||||| ||||||||| | ||||||||| ||||||| |||||||||||||||| || |||    
T  16811446 gccttccttcaaccatggagtcccaaacctacacggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcatt 16811347  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  16811346 gtcgtgccttgtgcaccggcgaccactc 16811319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 20885080 - 20885324
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||| |||||||||||||||||||| |||| |||||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||    
T  20885080 tcacccatccaaatactactccaagtcaagcacgcttaattgtggagttcttatggaatgtgctactaaaaagaagatgcatcttgttgatataggtagt 20885179  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    | ||||||||               |||||  ||| |||| ||||||| |||||||||| |||| ||||||||  | ||||||| ||||||||| ||||     
T  20885180 atcaaacaattcttataagtcttccttcaaccatgtagtcacatacctacacgacctcaagatccctctcattgcgatgtgatt-ggttcctctagaagt 20885278  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| || |||| |||||||||||||||||||| |||||    
T  20885279 tgtcgggagccgctcattggcgtgccttgtgcaccggcgatcactc 20885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 25238647 - 25238757
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| || ||||    
T  25238647 tcaccaatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgataaagatagt 25238746  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  25238747 accaaacaatt 25238757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 11180015 - 11180241
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||            
T  11180015 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 11180114  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| || | |||||||||| ||||||||| ||  ||||||||||||||| |||||||||||||||| || |||    
T  11180115 gccttccttcaaccatgtagtcccatacctacaaggcctcaggatccctctcattccgg-ctgattcggttcctctagaagctgtcgggagccgctcatt 11180213  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||| ||||||||||||||||||||||    
T  11180214 gtcgtaccttgtgcaccggcgaccactc 11180241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 25230222 - 25230448
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat- 110  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||  |||||||||||||||||| |||||||||||||||||||||||||| |||     
T  25230222 aagactactccaagtcaagcacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataatt 25230321  T
Q  111 --------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagcc 196  Q
                  |||||  ||| |||| ||||||| ||||||||||||||| ||||| ||| | ||||||| |||||||||  ||| |||||||||||    
T  25230322 cttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctccttccgatgtgatttggttcctctataagatgtcgggagcc 25230421  T
Q  197 acttattgccgtgccttgtgcaccggc 223  Q
     || |||| ||||||||||||||||||    
T  25230422 gctcattgtcgtgccttgtgcaccggc 25230448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 25237809 - 25238035
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat- 110  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||  |||||||||||||||||| |||||||||||||||||||||||||| |||     
T  25237809 aagactactccaagtcaagcacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataatt 25237908  T
Q  111 --------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagcc 196  Q
                  |||||  ||| |||| ||||||| ||||||||||||||| ||||| ||| | ||||||| |||||||||  ||| |||||||||||    
T  25237909 cttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctccttccgatgtgatttggttcctctataagatgtcgggagcc 25238008  T
Q  197 acttattgccgtgccttgtgcaccggc 223  Q
     || |||| ||||||||||||||||||    
T  25238009 gctcattgtcgtgccttgtgcaccggc 25238035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 13150080 - 13150302
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||  |||||||||||||||||||||||| |||||||||| ||||||            
T  13150080 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataa 13150179  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| || | |||||||| | ||||||||| || |||||||||||||||| |||||||||| ||||| || |||    
T  13150180 gccttccttcaaccatgtagtcccatacctacaaggcctcaggagccctctcattccggcgtgattcggttcctctagaagctgtcgagagccgctcatt 13150279  T
Q  204 gccgtgccttgtgcaccggcgac 226  Q
    | |||||||||||||||||||||    
T  13150280 gtcgtgccttgtgcaccggcgac 13150302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 231
Target Start/End: Original strand, 25230679 - 25230913
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat- 110  Q
    ||||||||||||||||||||||| |||| ||| |||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||||     
T  25230679 aagactactccaagtcaagcacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaatt 25230778  T
Q  111 --------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagcc 196  Q
                  |||||  ||| |||||||||||| || | |||||||||| |||||||||   ||||||| |||||||||  ||||||||||||||     
T  25230779 cttataaaccttccttcaaccatgtagtctcatacctacatggcctcaggatccctctcattccaatgtgatttggttcctctataagctgtcgggagct 25230878  T
Q  197 acttattgccgtgccttgtgcaccggcgaccactc 231  Q
     || |||| ||||||||||||||||| || |||||    
T  25230879 gctcattgtcgtgccttgtgcaccggagatcactc 25230913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 231
Target Start/End: Original strand, 25238266 - 25238500
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat- 110  Q
    ||||||||||||||||||||||| |||| ||| |||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||||     
T  25238266 aagactactccaagtcaagcacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaatt 25238365  T
Q  111 --------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagcc 196  Q
                  |||||  ||| |||||||||||| || | |||||||||| |||||||||   ||||||| |||||||||  ||||||||||||||     
T  25238366 cttataaaccttccttcaaccatgtagtctcatacctacatggcctcaggatccctctcattccaatgtgatttggttcctctataagctgtcgggagct 25238465  T
Q  197 acttattgccgtgccttgtgcaccggcgaccactc 231  Q
     || |||| ||||||||||||||||| || |||||    
T  25238466 gctcattgtcgtgccttgtgcaccggagatcactc 25238500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 32227202 - 32227429
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||||| ||||||            
T  32227202 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataa 32227301  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| || | ||| |||||| ||||||||| || |||||||||||||||| |||| ||| ||||||| || |||    
T  32227302 gccttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggcgtgattcggttcctctagaagttgttgggagccgctcatt 32227401  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    |  ||||||||||||| |||||||||||    
T  32227402 gttgtgccttgtgcactggcgaccactc 32227429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 31284257 - 31284349
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31284257 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 31284349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 13150535 - 13150627
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  13150535 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaatt 13150627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 32386715 - 32386807
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  32386715 ctccaagtcaagcacgcttaactgtggagttcttatggaattagctactgaaaagaagatgcatcttgttaatataggtagtaccaaacaatt 32386807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 25248283 - 25248184
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||||||| | ||| |||||||| |||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25248283 aagactactccaagtcaagcacgctgaaccgtggagttattatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 25248184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 32227665 - 32227453
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||||| |||||||||||||||||||| |||||||||||||| ||||||            
T  32227665 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataa 32227566  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| || | ||||| |||| ||||||||| || |||||||||||||||| |||||||||||||||| || |||    
T  32227565 gccttccttcaaccatgtagtcccatacctacaaggcctca-gatccctctcattccggcgtgattcggttcctctagaagctgtcgggagccgctcatt 32227467  T
Q  204 gccgtgccttgtgc 217  Q
    | ||||||||||||    
T  32227466 gtcgtgccttgtgc 32227453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 16811087 - 16810863
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt---------- 111  Q
    ||||||||||||  |||| |||| ||||||||| |||| ||||||| ||||||||||||||||||| ||||||| ||||||  |||||||              
T  16811087 caagtcaagcacacttaaatgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtagatatagttagtacgcaacaattcttataagcc 16810988  T
Q  112 -----tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgcc 206  Q
         ||||  |||||||| |||| || |||| ||||| |||| ||||||||| | ||||||||| ||||||| |||||||||||||||| || |||| |    
T  16810987 ttccatcaaccatgcagtcccatatctacacggcctcaagatccctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcattgtc 16810888  T
Q  207 gtgccttgtgcaccggcgaccactc 231  Q
    |||||||||||||||||||||||||    
T  16810887 gtgccttgtgcaccggcgaccactc 16810863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 8067445 - 8067353
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||| |||||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  8067445 ctccaagtcaagcacgcttaactatggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaatt 8067353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 202
Target Start/End: Original strand, 25239070 - 25239256
Alignment:
Q  31 cacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat---------------ttcaa 115  Q
    |||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| |||               |||||    
T  25239070 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagcgttccttcaa 25239169  T
Q  116 tgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttat 202  Q
      ||  |||| ||||||| ||||||||||| ||| ||||||| | ||||||||||| ||||||| |||||||||||||||| |||||    
T  25239170 ccatatagtcccatacctacacgacctcagaatccctctcataccggtgtgattcgattcctctagaagctgtcgggagccgcttat 25239256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 14820318 - 14820227
Alignment:
Q  20 tccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||| ||||||||||||||||||| |||  ||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  14820318 tccaagtcaagcacgcttaactgtggagttcttatggaacgagctaccgaaaataagatgcatcttgttgatataagtagtaccaaacaatt 14820227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 25802522 - 25802617
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaac 107  Q
    |||||||||||||||||| |||| ||||||||||| ||||||| ||||  |||| | |||||||||||||||||||||||||||||||||||||||    
T  25802522 aagactactccaagtcaaacacgcttaactgtggatttcttatggaatgggctatcgaaaagaagatgcatcttgttgatataggtagtaccaaac 25802617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 170
Target Start/End: Complemental strand, 41472462 - 41472300
Alignment:
Q  22 caagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat----------- 110  Q
    ||||||||||||| ||||| ||||||||||||| |||| | ||||| |||||||||||||||||||||||||| |||||||||||||||               
T  41472462 caagtcaagcacgtttaaccgtggagttcttatggaatgatctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagct 41472363  T
Q  111 ---ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
       |||||  ||||||||||||||||| |||||||||||||| ||||||||| | ||||||||    
T  41472362 tccttcaaccatgcagtctcatacctgtacgacctcaggatccctctcattccgatgtgattc 41472300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 27187315 - 27187403
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||| |||||||||||||||||||  ||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  27187315 aagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttagtgatataggtagtaccaaacaatt 27187403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 32796936 - 32797008
Alignment:
Q  39 actgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32796936 actgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 32797008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 7494053 - 7493954
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||| ||||||||||||||| | |||| |||||||||||||| |  |  |||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  7494053 aagacaactccaagtcaagcatgcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaaaaatt 7493954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 25802967 - 25803077
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||| ||||||| ||||||||||||||| ||||||  |||||||||||  |||  | |||| |||||||||| |||||||||  ||||||||||    
T  25802967 tcacccatcctaagactagtccaagtcaagcacgcttaactacggagttcttatgaaatgggataccgaaaagaagatacatcttgtttttataggtagt 25803066  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  25803067 accaaacaatt 25803077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 7477368 - 7477264
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||| |||||||||| |||||||||| | |||| |||||||||||||| |  |  |||||| ||||||||||| |||||||||||||| |||||||||||    
T  7477368 atcctaagactactctaagtcaagcatgcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgtatcttgttgatataagtagtaccaaa 7477269  T
Q  107 caatt 111  Q
     ||||    
T  7477268 aaatt 7477264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 29224489 - 29224397
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||| |||| ||||||||| |  |  |||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  29224489 ctccaagtcaagcacgcttaattgtgaagttcttatggtttgggctaccgaaaagaagatgcatcttgttagtataggtagtaccaaacaatt 29224397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 41474161 - 41474070
Alignment:
Q  20 tccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||| || ||||||||||| ||||||||| | | ||||||||||| ||  |||||||||||||||| |||| |||||||||    
T  41474161 tccaagtcaagcacgcttgactgtggagtttttatagaatgatccaccaaaaagaatatcaatcttgttgatataggaagtatcaaacaatt 41474070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 39653627 - 39653558
Alignment:
Q  162 gtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||| |||||||| ||||||||| |||||| || |||| ||||||||||||||||||||||||||    
T  39653627 gtgtgattcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactc 39653558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 13155303 - 13155405
Alignment:
Q  122 agtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccg 221  Q
    |||| ||||||| || | |||||||||| ||||||||  || |||||||||||||||| |||||||||| || || || |||| ||||||||||||||||    
T  13155303 agtcccatacctacaaggcctcaggatc-ctctcatttcggcgtgattcggttcctctagaagctgtcgaga-ccgctcattgtcgtgccttgtgcaccg 13155400  T
Q  222 gcgac 226  Q
    |||||    
T  13155401 gcgac 13155405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 14820196 - 14820107
Alignment:
Q  127 catacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtg 216  Q
    ||||||| ||||  ||||||| | ||||||||  ||||||||||||||||||| ||||||||| |||||| || |||  |||||||||||    
T  14820196 catacctacacgggctcaggaaccctctcattgcggtgtgattcggttcctctagaagctgtcaggagccgctcattatcgtgccttgtg 14820107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 53150793 - 53150869
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatatag 95  Q
    |||||||| ||||||| ||||||||| |||||||||  |||| |||||| |||| || |||||||||||| ||||||    
T  53150793 ctccaagttaagcacggttaactgtgaagttcttatgaaattggctaccgaaaaaaatatgcatcttgttaatatag 53150869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 26309987 - 26310062
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||| ||||||| || |||| |||||||| |||||||||||||||| ||| |||| |||||| |||| ||||    
T  26309987 ttaactgtcgagttctaatggaatgagctaccataaagaagatgcatctttttggtatatgtagtaacaaaaaatt 26310062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 25803099 - 25803212
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgc 217  Q
    |||||||| ||||||| |||||| | |||| | |||| |||| | | ||||||||||| ||| |||||||| || |||| || ||||   ||||||||||    
T  25803099 atgcagtcccatacctacacgacattaggaaccctcttattccgatatgattcggttcatctagaagctgttggaagccgctcattgttatgccttgtgc 25803198  T
Q  218 accggcgaccactc 231  Q
    ||| ||||||||||    
T  25803199 accagcgaccactc 25803212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 31284371 - 31284423
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||| |||||||||||||||||| |||| ||||||||| | ||||||||    
T  31284371 atgcagtcccatacctgcacgacctcaagatccctctcattccgatgtgattc 31284423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 7477242 - 7477191
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgatt 169  Q
    ||||||||||||||||||||||| | |||||| ||||||||| | |||||||    
T  7477242 atgcagtctcatacctgcacgactttaggatccctctcattccgatgtgatt 7477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 7493932 - 7493881
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgatt 169  Q
    ||||||||||||||||||||||| | |||||| ||||||||| | |||||||    
T  7493932 atgcagtctcatacctgcacgactttaggatctctctcattccgatgtgatt 7493881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 3890093 - 3890051
Alignment:
Q  69 aaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| ||||||||||||||||||||| |||||| |||||||||    
T  3890093 aaaaaaagatgcatcttgttgatatatgtagtagcaaacaatt 3890051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 3899915 - 3899873
Alignment:
Q  69 aaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| |||||||||||||||| |||| ||||||||||||||||    
T  3899915 aaaaaaagatgcatcttgttggtatatgtagtaccaaacaatt 3899873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 31103983 - 31104033
Alignment:
Q  61 agctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||| |||||||| |||| ||||| ||||| |||||||||    
T  31103983 agctaccaaaaagaaaatgcatctagttggtatagatagtatcaaacaatt 31104033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 2611615 - 2611860
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||| ||||||| |||||| |||||||||||||||||  |||||||||||||||||||||||||||| ||||| ||||    
T  2611615 tcacccatccaaagactactccaagtaaagcacgcttaactatggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgttatagatagt 2611714  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               ||| |  ||  |||||||||||| || |||||||||| | ||||||||| | |||||||| |||||||| |||||    
T  2611715 accaaacaattcttataagccttccttccaccatatagtctcatacctacatgacctcaggacccctctcattccgatgtgattcagttcctctagaagc 2611814  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| || |||| ||||||||||||||||||||||||||    
T  2611815 tgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactc 2611860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 34405572 - 34405799
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||| ||||||||||||||||||| ||||||            
T  34405572 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcctgttgatataggtagtacccaacaattcttataa 34405671  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| || | ||| |||||| ||||||||| ||||||||||||||||||| |||||||||||||||| || |||    
T  34405672 gccttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggtgtgattcggttcctctagaagctgtcgggagccgctcatt 34405771  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  34405772 gtcgtgccttgtgcaccggcgaccactc 34405799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 679999 - 679755
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||    
T  679999 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaatatgcatcttgttgatataggtagt 679900  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||| ||||||               ||||   ||| | || ||||||| ||||||||||||||| ||||||||||| |||||||| |||||||| |||||    
T  679899 acc-aacaattcttataagccttccttcagccatgtactcccatacctacacgacctcaggatccctctcattctgatgtgattcagttcctctagaagc 679801  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||  || |||| ||||| ||||||| ||||||||||||    
T  679800 tgtcgggagcagctcattgtcgtgctttgtgcatcggcgaccactc 679755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 35474084 - 35474329
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  35474084 tcacccatccaaagactactccaagtcaaacacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataagtagt 35474183  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    || |||||||               |||||  ||| |||||||||||| |||||||| |||||| ||||||||| |||||||||||  |  ||| ||||     
T  35474184 actaaacaattcttataagtctttcttcaaccatgtagtctcatacctacacgacctaaggatccctctcattccggtgtgattcgactgttctagaagt 35474283  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||||||| || || |||| |||||||||||||||| |||||||||    
T  35474284 tgtcgggaaccgctcattgtcgtgccttgtgcaccgacgaccactc 35474329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 42515275 - 42515091
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||    
T  42515275 tcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagt 42515176  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    ||||||||||               |||||| ||||||||||||||||||||| |||||||||| ||||||||| | ||||||||    
T  42515175 accaaacaattcttataagtcttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctcattccgatgtgattc 42515091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 2189309 - 2189082
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||           
T  2189309 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtgccaaacaattcttataa 2189210  T
Q  112 --------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
            ||||  |||||||| || ||||||||  |||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| || |||    
T  2189209 gccttctttcaaccatgcagtcccacacctgcacagcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcatt 2189110  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  2189109 gtcgtgccttgtgcaccggcgaccactc 2189082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 36422417 - 36422190
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||            
T  36422417 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 36422318  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| || | ||| |||||| ||||||||| || |||||||| ||||||| |||||||||||||||| || |||    
T  36422317 gccttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggcgtgattcgattcctctagaagctgtcgggagccgctcatt 36422218  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  36422217 gtcgtgccttgtgcaccggcgaccactc 36422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 42515709 - 42515518
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| |            
T  42515709 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacacttcttataa 42515610  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagc 195  Q
           |||||  ||| |||||||||||| |||| |||||||||| ||||||||||| ||||||||||||| ||| |||||||||||||||    
T  42515609 gccttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcattctgatgtgattcggttcgtctagaagctgtcgggagc 42515518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 28496019 - 28495792
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| |||| |            
T  28496019 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacagttcttataa 28495920  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| |||| ||||| |||| ||||||||| | ||||||||| ||||||| |||| ||| ||||||| || |||    
T  28495919 gccttccttcaaccatgtagtcccatacctacacggcctcaagatccctctcattccgatgtgattcgattcctctagaagttgttgggagccgctaatt 28495820  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    |  |||||||||||||||||||||||||    
T  28495819 gttgtgccttgtgcaccggcgaccactc 28495792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 6747561 - 6747806
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||   |||||||||||| |||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  6747561 tcacccatccaaagactacgataagtcaagcacgcttaactgtggagtttttatggaataggctaccaaaaagaagatgcatcttgttgatataggtagt 6747660  T
Q  101 accaaacaat---------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    ||||||||||               |||||  ||| ||| |||||||| |||| |||||||||| |||||||||   |||||||| | |  ||| ||||     
T  6747661 accaaacaattcttataatccttccttcaaccatgtagtatcatacctacacggcctcaggatccctctcattccaatgtgattcagcttgtctagaagt 6747760  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| || |||| | ||||||||||||||||||||||||    
T  6747761 tgtcgggagccgctcattgtcatgccttgtgcaccggcgaccactc 6747806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 2941738 - 2941830
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2941738 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 2941830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 46425913 - 46425814
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  46425913 aagactactccaagtcaagcacgcttaactgtggagttcttatggaataagataccgaaaagaagatgcatcttgttgatataggtaataccaaacaatt 46425814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 2193421 - 2193209
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||| ||||||||| ||||||||||||||| |||  ||| ||||||| || |||||||||||||||||||||||||||||||||||||||            
T  2193421 ctccaaatcaagcacgcttaactgtggagttcctatgaaatgagctaccgaatagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 2193322  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| ||||||||||||  ||||||| | ||||||||| ||||||||||||||||||| ||||||||| ||||||  | |||    
T  2193321 gccttccttcaaccatgcagtcccatacctgcacggtctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgttcatt 2193222  T
Q  204 gccgtgccttgtg 216  Q
    | |||||||||||    
T  2193221 gtcgtgccttgtg 2193209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 2465898 - 2465808
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa 109  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2465898 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaa 2465808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 6719053 - 6719147
Alignment:
Q  17 tactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||||| |||||| |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6719053 tactccaagtcaagcacgcttaactctggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 6719147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 9125124 - 9125032
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| ||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9125124 ctccgagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 9125032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 13125117 - 13125209
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  13125117 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaatt 13125209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 2466089 - 2465999
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaa 109  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  2466089 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcaacttgttgatataggtagtaccaaacaa 2465999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9623390 - 9623281
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||| |||||||||| |||| |||||||||||||||||||||||| | |||||  |||||||||||||||||||||||||||| ||    
T  9623390 tcacccatccaaagactagtccaagtcaaacacgcttaactgtggagttcttatagaatgaactacc-gaaagaagatgcatcttgttgatataggtggt 9623292  T
Q  101 accaaacaatt 111  Q
    | |||||||||    
T  9623291 atcaaacaatt 9623281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 10430806 - 10430701
Alignment:
Q  126 tcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcga 225  Q
    ||||||||||||| |||||||| | ||||||||| |||||||| |||||||||| ||||||||| |||||| || |||| ||||||||||||||||||||    
T  10430806 tcatacctgcacggcctcaggaaccctctcattccggtgtgatacggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcga 10430707  T
Q  226 ccactc 231  Q
    ||||||    
T  10430706 ccactc 10430701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 29357430 - 29357660
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat- 110  Q
    |||||||||| ||||||| |||| ||||||||| |||||||||  ||   |||| | ||||||||||||||||||||||||||| ||||||||||||||     
T  29357430 aagactactctaagtcaaacacggttaactgtgtagttcttatgaaacgggctatcgaaaagaagatgcatcttgttgatatagttagtaccaaacaatt 29357529  T
Q  111 --------------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagcc 196  Q
                  |||||  |||||||| ||||||||||||||||| ||||  ||||||||| |||||||||| |||| ||| |||| |||||||||||    
T  29357530 cttataaacattccttcaaccatgcagtcccatacctgcacgacctcgggatacctctcattc-ggtgtgattcagttcatctagaagttgtcgggagcc 29357628  T
Q  197 acttattgccgtgccttgtgcaccggcgacca 228  Q
     || |||| |||||||| |||| |||||||||    
T  29357629 gctcattgtcgtgccttatgcatcggcgacca 29357660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 18833447 - 18833359
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||| |||| |||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18833447 aagtcaaacacgcttaactgtggagttcttatgtaattagctaccgaaaagaagatgcatcttgttgatataggtagtactaaacaatt 18833359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 25182538 - 25182434
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    ||||||||||||||||||||||| |||  ||||||||| ||||||||| |||| || |||| |||| |||||| ||||||||||||||||||||||||||    
T  25182538 atccaaagactactccaagtcaaacacacttaactgtgaagttcttatggaatgagttaccgaaaataagatgtatcttgttgatataggtagtaccaaa 25182439  T
Q  107 caatt 111  Q
    |||||    
T  25182438 caatt 25182434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 29038989 - 29039093
Alignment:
Q  7 atccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaa 106  Q
    |||||||||||||||||||||||||||| |||| ||| |||||||||| ||||    || |||||||||||||||| |||||||||||||||||||||||    
T  29038989 atccaaagactactccaagtcaagcacgcttaaatgtagagttcttatggaatggattatcaaaaagaagatgcatgttgttgatataggtagtaccaaa 29039088  T
Q  107 caatt 111  Q
    |||||    
T  29039089 caatt 29039093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 28495589 - 28495668
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggta 98  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  28495589 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctacctaaaagaagatgcatcttgttgatataggta 28495668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 35527084 - 35527328
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| || ||||||||||||||||||||||| | ||||||||||||||| ||| ||||   ||||  ||||||| |||||||||||||||||||||||     
T  35527084 tcacccatgcaaagactactccaagtcaagcatgcttaactgtggagttcctatggaatggactactgaaaagaatatgcatcttgttgatataggtagc 35527183  T
Q  101 accaaacaa---------------tttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagc 185  Q
    |||||||||               ||||||  |  ||||| ||||  ||||||||||| ||||| ||||||||  ||||||||||||||| ||| |||||    
T  35527184 accaaacaattcttataagccttctttcaaccaaccagtcccatatttgcacgacctcgggatccctctcatttcggtgtgattcggttcgtctagaagc 35527283  T
Q  186 tgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||| ||||||| || |||| |||| ||||||||||| |||||||||    
T  35527284 tgttgggagccgctcattg-cgtgtcttgtgcaccgacgaccactc 35527328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 26421723 - 26421833
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||||||||||||||||||| ||| ||| |||| ||||||||| ||||||||| ||||  |||||| |||||||||| |||||||||| |||||| |||    
T  26421723 tcaccaatccaaagactactcgaagccaaacacgcttaactgtgtagttcttatggaatgggctaccgaaaagaagattcatcttgttggtatagggagt 26421822  T
Q  101 accaaacaatt 111  Q
    ||| |||||||    
T  26421823 acctaacaatt 26421833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 11517387 - 11517462
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||| ||||||||||| |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  11517387 ttaactgcggagttcttatggaatgagctaccgaaaagtagatgcatcttgttgatataggtagtaccaaacaatt 11517462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22529198 - 22529305
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||| ||||||| |  ||| || |||  |||||||||||||||||||| |||||| ||||    
T  22529198 tcacccatccaaagactactccaagtcaaacacgcttaactgtgaagttcttttgtaatgagttactgaaaagaagatgcatcttgtttatatagatagt 22529297  T
Q  101 accaaaca 108  Q
    ||||||||    
T  22529298 accaaaca 22529305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 43233461 - 43233351
Alignment:
Q  121 cagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcacc 220  Q
    ||||| ||||||| |||| ||||| |||| ||||||||  ||||||||||||||||||| ||||||||  |||||| || |||| |||||||| ||||||    
T  43233461 cagtcacatacctacacggcctcatgatccctctcatttcggtgtgattcggttcctctagaagctgttaggagccgctcattgtcgtgccttatgcacc 43233362  T
Q  221 ggcgaccactc 231  Q
    |||||||||||    
T  43233361 ggcgaccactc 43233351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 13122486 - 13122567
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    |||||| ||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||| |||||    
T  13122486 ctccaaatcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatatatgtagt 13122567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 5406573 - 5406661
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||| ||||||||||||||||||| |  |  || |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  5406573 aagtcaagcacgcttaactgtggagttcttatggtttgggcaaccaaaaataagatgcatcttgttgatataggtaataccaaacaatt 5406661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 31406552 - 31406657
Alignment:
Q  2 caccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagta 101  Q
    |||| ||||||||||||||||||    |||||| |||||||||||||||||||  ||   |||||| ||||||||||||||||||||||||||||||  |    
T  31406552 cacccatccaaagactactccaa----agcacgcttaactgtggagttcttatgaaacgggctaccgaaaagaagatgcatcttgttgatataggtaaca 31406647  T
Q  102 ccaaacaatt 111  Q
    ||||||||||    
T  31406648 ccaaacaatt 31406657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 26957661 - 26957764
Alignment:
Q  127 catacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgac 226  Q
    ||||||| |||  ||||| |||| ||||||||| | ||||||||||||||||| |||| ||||||||||| || |||| |||||||||||||||| ||||    
T  26957661 catacctacacagcctcaagatccctctcattccgatgtgattcggttcctctagaagttgtcgggagccgctcattgtcgtgccttgtgcaccgacgac 26957760  T
Q  227 cact 230  Q
    ||||    
T  26957761 cact 26957764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 7646459 - 7646528
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgtt 88  Q
    |||||||||||||||| ||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||    
T  7646459 ctccaagtcaagcacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtt 7646528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 2463684 - 2463580
Alignment:
Q  127 catacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgac 226  Q
    ||||||| || | |||||||| | ||||||||| |||||| |||||||||||| ||||||||  ||||||  | |||| |||||||||||||||||||||    
T  2463684 catacctacatggcctcaggaaccctctcattccggtgtgtttcggttcctctagaagctgttaggagccgttcattgtcgtgccttgtgcaccggcgac 2463585  T
Q  227 cactc 231  Q
    |||||    
T  2463584 cactc 2463580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 3305411 - 3305520
Alignment:
Q  122 agtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccg 221  Q
    |||| ||||| | |||| |||||||||| | ||||||  | ||||||||||||||||| |||||||||||||||  || |||| |||||||| | |||||    
T  3305411 agtcccatacttacacggcctcaggatccccctcatttcgatgtgattcggttcctctagaagctgtcgggagctgctcattgtcgtgccttatccaccg 3305510  T
Q  222 gcgaccactc 231  Q
    ||||||||||    
T  3305511 gcgaccactc 3305520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 26421282 - 26421378
Alignment:
Q  15 actactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| ||||| |||| |||| ||||||||||||||||||| ||||   ||||| |||| || ||||||||||||||||||||||||| ||| |||||    
T  26421282 actaatccaattcaaacacgtttaactgtggagttcttatggaatggactaccgaaaaaaatatgcatcttgttgatataggtagtatcaagcaatt 26421378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 7461326 - 7461423
Alignment:
Q  13 agactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| |||| |||| || |||| |||||||| |||||||||| |||| | ||||||||||||||||| |||||||| |||||| ||||| |||||||||    
T  7461326 agaccactctaagttaaacacgcttaactgtagagttcttat-gaatgaactaccaaaaagaagatgtatcttgtttatatagttagtatcaaacaatt 7461423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 7646580 - 7646514
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatctt 85  Q
    |||||||||||||||| ||||||||||||||||||| |||| || |||| |||| ||||||||||||    
T  7646580 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagttaccgaaaacaagatgcatctt 7646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 16192457 - 16192392
Alignment:
Q  46 agttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||| ||||  |||||||||| ||||||||||||||||||| |||||| ||||||||||||    
T  16192457 agttcttatggaatgggctaccaaaacgaagatgcatcttgttgatgtaggtaataccaaacaatt 16192392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 16811966 - 16812046
Alignment:
Q  151 ctctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||||| |||||||||||| || | ||||| |||||||||| || |||| |||| ||||||||||||| |||||||    
T  16811966 ctctcattctgatgtgattcggtttctttagaagccgtcgggagccgctcattggcgtgtcttgtgcaccggcaaccactc 16812046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 36015404 - 36015484
Alignment:
Q  31 cacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||| ||||||||| ||||||||| ||||  ||||   ||||||||| |||||||||||||||| ||||||||||||||||    
T  36015404 cacgtttaactgtgaagttcttatggaatgggctatttaaaagaagaggcatcttgttgatatatgtagtaccaaacaatt 36015484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 1628861 - 1628786
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||| |||||||||||| | ||  ||| | |||||||||||||||||||||||||| | |||||||||||||||    
T  1628861 ttaactatggagttcttatggtatgggcttcaaaaaagaagatgcatcttgttgatatcgatagtaccaaacaatt 1628786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 28495703 - 28495781
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagcc 196  Q
    ||| |||| ||||||| ||||||||||||||| ||||||||| | || |||||| ||||||| |||||||| |||||||    
T  28495703 atgtagtcccatacctacacgacctcaggatccctctcattccgatgggattcgattcctctagaagctgttgggagcc 28495781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3305311 - 3305380
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaa 70  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||| |||| ||||  ||| ||||||||||    
T  3305311 tcacccatccaaagactactccaaatcaagcacgcttaactgtgaagtttttatgtaatgagctaccaaa 3305380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 37672321 - 37672233
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||| |||| ||||||||| | |||||||  ||| | ||| |||||||||| |||||||||||| || | ||||||||||||||||    
T  37672321 aagtcaaacacgcttaactgtgtatttcttatgaaatcaactaacaaaaagaagttgcatcttgttggtacaagtagtaccaaacaatt 37672233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 43233534 - 43233486
Alignment:
Q  63 ctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  43233534 ctaccgaaaaaaagatgcatcttgttgatatagatagtaccaaacaatt 43233486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 43776271 - 43776319
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctacc 67  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  43776271 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctacc 43776319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 11372599 - 11372524
Alignment:
Q  36 ttaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||| |||||||||||| |  | |||||||||||| || ||||||| ||||| || ||||||||||||||||||    
T  11372599 ttaactttggagttcttatggtttgagctaccaaaaataacatgcatcatgttggtacaggtagtaccaaacaatt 11372524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 31743834 - 31743893
Alignment:
Q  48 ttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaac 107  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||| ||| |||||||    
T  31743834 ttcttatggaatgggctaccgaaaagaagatgcatcttgttgatatagatagcaccaaac 31743893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 2941852 - 2941904
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||| |||||||| ||| |||||||||| ||||||||||| ||||||||    
T  2941852 atgcagtcccatacctgtacggcctcaggatccctctcattctgatgtgattc 2941904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 6585731 - 6585680
Alignment:
Q  63 ctaccaaaaagaagatgcatctt--gttgatataggtagtaccaaacaattt 112  Q
    ||||||||| ||||||| |||||  |||||||||||||||||||||||||||    
T  6585731 ctaccaaaaggaagatgtatcttttgttgatataggtagtaccaaacaattt 6585680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 6719228 - 6719271
Alignment:
Q  188 tcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    ||||||||| || |||| ||||||||||||||||||||||||||    
T  6719228 tcgggagccgctcattggcgtgccttgtgcaccggcgaccactc 6719271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 29039173 - 29039219
Alignment:
Q  185 ctgtcgggagccacttattgccgtgccttgtgcaccggcgaccactc 231  Q
    |||||||||||| || |||| |||||||||||||||||||| |||||    
T  29039173 ctgtcgggagccgctcattgtcgtgccttgtgcaccggcgatcactc 29039219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 9125007 - 9124958
Alignment:
Q  121 cagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||||||||||||| ||||| |||| ||||||||| | ||||||||    
T  9125007 cagtctcatacctgcacggcctcaagatctctctcattccgatgtgattc 9124958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 1385 - 1158
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||            
T  1385 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaattcttataa 1286  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||| | |||||||| |  |||||||| ||||||||||||||||||| |||| |||| |||||| || |||    
T  1285 gccttccttcaaccatgcagtcccatacctgcatggcctcaggaaccgtctcattccggtgtgattcggttcctctagaagttgtcaggagccgctcatt 1186  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||||||||||    
T  1185 gtcgtgccttgtgcaccggcgaccactc 1158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 4726 - 4499
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||| ||||||  |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  4726 ctccaagttaagcacacttaactgtggagttcttataaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttctaa 4627  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  |||||||| |||||||||| | |||||||| | ||||| ||| | ||||||||||||||||| ||||||||| |||||| || |||    
T  4626 accttccttcaaccatgcagtcccatacctgcatggcctcaggaaccctctccttccgatgtgattcggttcctctagaagctgtcaggagccgctcatt 4527  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | ||||||||||||||||||| ||||||    
T  4526 gtcgtgccttgtgcaccggcggccactc 4499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 5186 - 4954
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt------- 111  Q
    |||||||| ||||||| |||||||||||||||||||  ||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||           
T  5186 ctccaagttaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttctct 5087  T
Q  112 -------------tcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccac 198  Q
                 ||||  |||||||| |||||||||| | |||||||| | ||||||||| ||||||||||||||||||| |||| |||| |||||| |    
T  5086 tttaaaccttccttcaaccatgcagtcccatacctgcatggcctcaggaaccctctcattccggtgtgattcggttcctctagaagttgtcaggagccgc 4987  T
Q  199 ttattgccgtgccttgtgcaccggcgaccactc 231  Q
    | |||| ||||||||||||||||||||||||||    
T  4986 taattgtcgtgccttgtgcaccggcgaccactc 4954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 2907 - 2680
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||| ||||||            
T  2907 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtacccaacaattcttataa 2808  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| |||| |||||||||| ||||||||  | ||||||||| ||||||| |||| |||||||||||||| |||    
T  2807 gccttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcatttcgatgtgattcgattcctctagaagttgtcgggagccactcatt 2708  T
Q  204 gccgtgccttgtgcaccggcgaccactc 231  Q
    | |||||||||||| |||||||||||||    
T  2707 gtcgtgccttgtgctccggcgaccactc 2680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 2032 - 2204
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  2032 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 2131  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcc 176  Q
           |||||  ||||||||||||||||||||| |||||||| | || |||||||||||||||||||||||    
T  2132 gccttccttcaaccatgcagtctcatacctgcacggcctcaggaaccctttcattctggtgtgattcggttcc 2204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 226
Target Start/End: Complemental strand, 154922 - 154700
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaat-------- 110  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||  |||||||||||||||||||||||| |||||||||| ||||||            
T  154922 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataa 154823  T
Q  111 -------ttcaatgatgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttatt 203  Q
           |||||  ||| |||| ||||||| || | |||||||| | ||||||||| || |||||||||||||||| |||||||||| ||||| || |||    
T  154822 gccttccttcaaccatgtagtcccatacctacaaggcctcaggagccctctcattccggcgtgattcggttcctctagaagctgtcgagagccgctcatt 154723  T
Q  204 gccgtgccttgtgcaccggcgac 226  Q
    | |||||||||||||||||||||    
T  154722 gtcgtgccttgtgcaccggcgac 154700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 151685 - 151583
Alignment:
Q  122 agtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccg 221  Q
    |||| ||||||| || | |||||||||| ||||||||  || |||||||||||||||| |||||||||| || || || |||| ||||||||||||||||    
T  151685 agtcccatacctacaaggcctcaggatc-ctctcatttcggcgtgattcggttcctctagaagctgtcgaga-ccgctcattgtcgtgccttgtgcaccg 151588  T
Q  222 gcgac 226  Q
    |||||    
T  151587 gcgac 151583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 105885 - 105793
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  105885 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaacaatt 105793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 19131 - 19039
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||||||||||||||||  ||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  19131 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaatt 19039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 18216 - 18268
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    |||||||| |||||||||||| |||| ||||| ||||||||| | ||||||||    
T  18216 atgcagtcccatacctgcacggcctctggatccctctcattccgatgtgattc 18268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 2191 - 2283
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| |||||| | |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2191 ctccaagtcaagcacgcttaactattgagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 2283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 69; Significance: 4e-31; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 162659 - 162751
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||| ||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  162659 ctccaagtcaagcacgcttaactgcggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaatt 162751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 69778 - 69888
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||||||||| |||||||| ||  |||||||||||||||||| |||| |||||   |||| |||||||||| ||||||||||||||||    
T  69778 tcacccatccaaagactactcctagtcaagcccgcataactgtggagttcttatggaatgagctaatgaaaaaaagatgcatcatgttgatataggtagt 69877  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  69878 accaaacaatt 69888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 163236 - 163167
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgtt 88  Q
    |||||||||||||||| ||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||    
T  163236 ctccaagtcaagcacgcttaactgtggaattcttaaagaatgagctaccgaaaagaagatgcatcttgtt 163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 163115 - 163181
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatctt 85  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||| ||||||||||||    
T  163115 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 163181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 107444 - 107536
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  107444 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatattggtagtatcaaacaatt 107536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 10465 - 10373
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  10465 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaatt 10373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 2277 - 2178
Alignment:
Q  12 aagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||| |||||||| | ||||||||||||||||||  ||||  ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  2277 aagactactccatgtcaagcatgcttaactgtggagttcttaaggaatgggctaccaaaaagaagatgcatcttgtttatatagggagtaccaaacaatt 2178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 797 - 699
Alignment:
Q  122 agtctcatacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcacc 220  Q
    |||| ||||||| || | |||||||||| ||||||||| | |||||||||||||||||  ||| ||||||||||| || |||| ||| |||||||||||    
T  797 agtcccatacctacatggcctcaggatccctctcattccgatgtgattcggttcctctataagttgtcgggagccgctcattgtcgtaccttgtgcacc 699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 13518 - 13593
Alignment:
Q  23 aagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggta 98  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  13518 aagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggta 13593  T

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Target: scaffold0036 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 26235 - 26142
Alignment:
Q  17 tactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattt 112  Q
    |||||||||||||||||  |||||||  ||||||||||| ||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  26235 tactccaagtcaagcacacttaactg--gagttcttataaaatgagctaccaaaaagaagatgcatcatgttgatatatgtagtaccaaaaaattt 26142  T

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Target: scaffold0005 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 245674 - 245588
Alignment:
Q  25 gtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||| ||||||||||||||||||| |  |  |||||  |||||||||||||||||||||||||||||||||||||||||||    
T  245674 gtcaagcacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 245588  T

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Target: scaffold0005; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 245200 - 245159
Alignment:
Q  70 aaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  245200 aaagaagatgcatcttgttgatataggtagtaccaaacaatt 245159  T

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Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 245713 - 245678
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttat 54  Q
    |||||||||||||||| |||||||||||||||||||    
T  245713 ctccaagtcaagcacgcttaactgtggagttcttat 245678  T

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Target: scaffold0088 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 228
Target Start/End: Complemental strand, 23785 - 23614
Alignment:
Q  72 agaagatgcatcttgttgatataggtagtaccaaacaatt---------------tcaatgatgcagtctcatacctgcacgacctcaggatcactctca 156  Q
    ||||||||||||||||||||||||||||||||||||||||               ||||  |||||||| |||||||||||| ||||| || | ||||||    
T  23785 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagaaccctctca 23686  T
Q  157 ttctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgacca 228  Q
    ||  ||||||||||||||||||| || ||  || |||||| || |||| |||||||||||||||||||||||    
T  23685 tttcggtgtgattcggttcctctagatgccatcaggagccgctcattgtcgtgccttgtgcaccggcgacca 23614  T

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Target: scaffold0442 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 2547 - 2443
Alignment:
Q  127 catacctgcacgacctcaggatcactctcattctggtgtgattcggttcctctggaagctgtcgggagccacttattgccgtgccttgtgcaccggcgac 226  Q
    ||||||| || | |||||||||| ||||||||||| |||||||||||||||||  ||| | ||||||||| || |||| ||||||||||||||||||||     
T  2547 catacctacatggcctcaggatccctctcattctgatgtgattcggttcctctataagttttcgggagccgctcattgtcgtgccttgtgcaccggcgat 2448  T
Q  227 cactc 231  Q
    |||||    
T  2447 cactc 2443  T

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Target: scaffold0391 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 14924 - 14814
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagt 100  Q
    ||||| |||||||||| |||||||||||| || | ||||||||| |||||||||  ||| |  |||| |||||| |||||||||| |||||||||||| |    
T  14924 tcacccatccaaagaccactccaagtcaaacatgcttaactgtgaagttcttattcaatgaattaccgaaaagacgatgcatcttattgatataggtatt 14825  T
Q  101 accaaacaatt 111  Q
    |||||||||||    
T  14824 accaaacaatt 14814  T

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Target: scaffold0664 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 3993 - 4129
Alignment:
Q  49 tcttatagaattagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatt---------------tcaatgatgcagtctcatacct 133  Q
    ||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||||||               ||||  |||||||| |||||||    
T  3993 tcttataaaatgggctaccaaaaagaagatgcatcttgttgatacaggtagtaccaaacaattcttataagcattccttcaacaatgcagtcccatacct 4092  T
Q  134 gcacgacctcaggatcactctcattctggtgtgattc 170  Q
    ||||| |||| ||||| ||||||||||||||||||||    
T  4093 gcacggcctcgggatccctctcattctggtgtgattc 4129  T

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Target: scaffold0277 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 14683 - 14749
Alignment:
Q  19 ctccaagtcaagcacgattaactgtggagttcttatagaattagctaccaaaaagaagatgcatctt 85  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||| |||| ||||||||||||    
T  14683 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 14749  T

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Target: scaffold0007 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 142303 - 142347
Alignment:
Q  67 caaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  142303 caaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 142347  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 142369 - 142421
Alignment:
Q  118 atgcagtctcatacctgcacgacctcaggatcactctcattctggtgtgattc 170  Q
    ||| |||| |||||||||||| |||||||||| ||||||||| | ||||||||    
T  142369 atgaagtcccatacctgcacggcctcaggatccctctcattccgatgtgattc 142421  T

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Target: scaffold0101 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 45497 - 45459
Alignment:
Q  73 gaagatgcatcttgttgatataggtagtaccaaacaatt 111  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  45497 gaagatacatcttgttgatataggtagtaccaaataatt 45459  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 246728 - 246781
Alignment:
Q  1 tcaccaatccaaagactactccaagtcaagcacgattaactgtggagttcttat 54  Q
    ||||| |||||||||||||||||| | |||||||||||| | | ||||||||||    
T  246728 tcacccatccaaagactactccaaattaagcacgattaattatagagttcttat 246781  T

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