View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7226_high_1 (Length: 639)

Name: NF7226_high_1
Description: NF7226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7226_high_1
NF7226_high_1
[»] chr7 (22 HSPs)
chr7 (23-307)||(31281364-31281649)
chr7 (331-627)||(31281671-31281967)
chr7 (434-488)||(8615021-8615075)
chr7 (439-491)||(8683065-8683117)
chr7 (431-487)||(24991780-24991836)
chr7 (437-492)||(25888894-25888949)
chr7 (437-491)||(39801701-39801755)
chr7 (414-456)||(42219376-42219418)
chr7 (427-468)||(3584222-3584263)
chr7 (427-488)||(18714446-18714507)
chr7 (450-491)||(37251199-37251240)
chr7 (427-488)||(42043068-42043129)
chr7 (437-486)||(46987086-46987135)
chr7 (442-486)||(3533025-3533069)
chr7 (431-491)||(5352324-5352384)
chr7 (427-491)||(8237634-8237698)
chr7 (427-491)||(10244722-10244786)
chr7 (442-486)||(21050239-21050283)
chr7 (415-463)||(21928108-21928156)
chr7 (427-463)||(25149406-25149442)
chr7 (439-487)||(34885873-34885921)
chr7 (427-491)||(37930039-37930103)
[»] chr3 (19 HSPs)
chr3 (414-485)||(20079723-20079794)
chr3 (414-486)||(47377338-47377410)
chr3 (446-492)||(22843458-22843504)
chr3 (437-486)||(8113574-8113623)
chr3 (414-491)||(18870714-18870791)
chr3 (414-491)||(45431943-45432020)
chr3 (416-491)||(5349523-5349598)
chr3 (428-483)||(40575612-40575667)
chr3 (429-463)||(12746361-12746395)
chr3 (437-491)||(33633330-33633384)
chr3 (442-491)||(1149086-1149135)
chr3 (427-492)||(5428438-5428503)
chr3 (442-491)||(16980371-16980420)
chr3 (427-491)||(24120422-24120487)
chr3 (442-491)||(53996294-53996343)
chr3 (427-463)||(10922310-10922346)
chr3 (423-467)||(22365991-22366035)
chr3 (427-491)||(22722397-22722461)
chr3 (427-491)||(38130961-38131025)
[»] chr8 (21 HSPs)
chr8 (414-492)||(17704007-17704085)
chr8 (427-463)||(24696008-24696044)
chr8 (437-491)||(13286126-13286180)
chr8 (437-485)||(15438454-15438502)
chr8 (437-485)||(15529758-15529806)
chr8 (442-481)||(11603854-11603893)
chr8 (414-463)||(18147479-18147528)
chr8 (437-486)||(19778065-19778114)
chr8 (414-463)||(21589190-21589239)
chr8 (442-487)||(30623292-30623337)
chr8 (414-463)||(33743598-33743647)
chr8 (442-491)||(37015853-37015902)
chr8 (427-468)||(42208471-42208512)
chr8 (427-467)||(6898136-6898176)
chr8 (427-463)||(10601786-10601822)
chr8 (427-491)||(11708981-11709045)
chr8 (415-463)||(13357431-13357479)
chr8 (415-463)||(15020784-15020832)
chr8 (439-491)||(23816785-23816837)
chr8 (427-491)||(27587216-27587280)
chr8 (439-491)||(44293570-44293622)
[»] chr6 (16 HSPs)
chr6 (418-463)||(2692238-2692283)
chr6 (427-471)||(3808120-3808164)
chr6 (427-463)||(6864135-6864171)
chr6 (439-491)||(7083006-7083058)
chr6 (427-467)||(8809325-8809365)
chr6 (437-491)||(655761-655815)
chr6 (415-464)||(1918448-1918497)
chr6 (437-486)||(4450262-4450311)
chr6 (427-464)||(8130461-8130498)
chr6 (442-491)||(8810635-8810684)
chr6 (414-491)||(9923235-9923312)
chr6 (427-468)||(31971547-31971588)
chr6 (414-462)||(1606659-1606707)
chr6 (423-467)||(6142719-6142763)
chr6 (427-463)||(8637439-8637475)
chr6 (431-487)||(18254107-18254163)
[»] chr4 (30 HSPs)
chr4 (414-491)||(7230275-7230352)
chr4 (437-491)||(19854560-19854614)
chr4 (427-485)||(37921747-37921805)
chr4 (437-486)||(7922262-7922311)
chr4 (414-491)||(50362128-50362205)
chr4 (414-486)||(54500569-54500641)
chr4 (432-491)||(36203231-36203290)
chr4 (425-456)||(42594572-42594603)
chr4 (414-481)||(56551581-56551648)
chr4 (437-491)||(10303523-10303577)
chr4 (427-485)||(11286783-11286841)
chr4 (442-492)||(31780739-31780789)
chr4 (427-497)||(37193238-37193308)
chr4 (442-491)||(6087742-6087791)
chr4 (442-471)||(6520086-6520115)
chr4 (414-491)||(12322668-12322745)
chr4 (414-467)||(16733508-16733561)
chr4 (442-491)||(34247435-34247484)
chr4 (442-486)||(10006340-10006384)
chr4 (427-463)||(16304100-16304136)
chr4 (427-491)||(19479479-19479543)
chr4 (435-487)||(19908691-19908743)
chr4 (427-487)||(20383487-20383547)
chr4 (427-491)||(20799396-20799460)
chr4 (442-486)||(21317355-21317399)
chr4 (441-485)||(22279536-22279580)
chr4 (414-462)||(42344607-42344655)
chr4 (437-485)||(46676510-46676558)
chr4 (438-486)||(56088086-56088134)
chr4 (442-486)||(56497625-56497669)
[»] chr1 (16 HSPs)
chr1 (414-491)||(1794591-1794668)
chr1 (428-491)||(34632164-34632227)
chr1 (414-468)||(46707890-46707944)
chr1 (414-485)||(15854077-15854148)
chr1 (436-491)||(28032279-28032334)
chr1 (437-491)||(52441523-52441577)
chr1 (437-486)||(9639829-9639878)
chr1 (415-488)||(34521180-34521253)
chr1 (437-486)||(38448878-38448927)
chr1 (427-460)||(49868037-49868070)
chr1 (427-463)||(6000145-6000181)
chr1 (427-491)||(11014227-11014291)
chr1 (442-486)||(17283951-17283995)
chr1 (428-464)||(27687615-27687651)
chr1 (427-491)||(33153882-33153946)
chr1 (442-486)||(34733400-34733444)
[»] chr5 (25 HSPs)
chr5 (414-479)||(23218967-23219032)
chr5 (414-467)||(31305875-31305928)
chr5 (439-491)||(1642329-1642381)
chr5 (427-471)||(18557869-18557913)
chr5 (428-488)||(20927637-20927697)
chr5 (414-486)||(37614416-37614488)
chr5 (436-487)||(9123856-9123907)
chr5 (442-485)||(13409429-13409472)
chr5 (427-493)||(16701583-16701649)
chr5 (437-491)||(18331702-18331756)
chr5 (414-463)||(3389185-3389234)
chr5 (414-491)||(5485181-5485258)
chr5 (442-491)||(18489093-18489142)
chr5 (442-491)||(30893928-30893977)
chr5 (442-491)||(36321511-36321560)
chr5 (414-491)||(37932325-37932402)
chr5 (427-491)||(10704333-10704397)
chr5 (442-486)||(16133082-16133126)
chr5 (435-463)||(17046357-17046385)
chr5 (442-486)||(17338720-17338764)
chr5 (443-491)||(19248474-19248522)
chr5 (427-463)||(22394058-22394094)
chr5 (427-491)||(22522803-22522867)
chr5 (442-486)||(27679498-27679542)
chr5 (443-491)||(40056608-40056656)
[»] chr2 (26 HSPs)
chr2 (414-463)||(36359337-36359386)
chr2 (435-491)||(7206120-7206176)
chr2 (414-462)||(32204568-32204616)
chr2 (440-487)||(14944161-14944208)
chr2 (442-489)||(20120738-20120785)
chr2 (437-487)||(4056789-4056839)
chr2 (414-488)||(13000683-13000757)
chr2 (427-468)||(4138009-4138050)
chr2 (446-491)||(4238754-4238799)
chr2 (437-486)||(24593376-24593425)
chr2 (437-486)||(28771582-28771631)
chr2 (414-463)||(30045476-30045525)
chr2 (414-463)||(30050639-30050688)
chr2 (414-463)||(30141683-30141732)
chr2 (440-493)||(30762510-30762563)
chr2 (437-486)||(39068720-39068769)
chr2 (414-463)||(43004671-43004720)
chr2 (442-486)||(18231490-18231534)
chr2 (439-487)||(18324908-18324956)
chr2 (442-486)||(19179067-19179111)
chr2 (442-486)||(22608527-22608571)
chr2 (427-491)||(29544622-29544686)
chr2 (415-491)||(35820291-35820367)
chr2 (442-486)||(37320534-37320578)
chr2 (427-467)||(42181305-42181345)
chr2 (427-491)||(44526123-44526187)
[»] scaffold0712 (1 HSPs)
scaffold0712 (423-467)||(7234-7278)
[»] scaffold0709 (1 HSPs)
scaffold0709 (423-467)||(7252-7296)
[»] scaffold1619 (1 HSPs)
scaffold1619 (427-464)||(1053-1090)
[»] scaffold0896 (1 HSPs)
scaffold0896 (442-491)||(3136-3185)
[»] scaffold0533 (1 HSPs)
scaffold0533 (438-486)||(8864-8912)
[»] scaffold0334 (1 HSPs)
scaffold0334 (427-491)||(5177-5241)
[»] scaffold0117 (1 HSPs)
scaffold0117 (438-486)||(18293-18341)
[»] scaffold0026 (1 HSPs)
scaffold0026 (437-489)||(75322-75374)
[»] scaffold0025 (1 HSPs)
scaffold0025 (431-491)||(64213-64273)
[»] scaffold0011 (1 HSPs)
scaffold0011 (427-491)||(185258-185322)


Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 23 - 307
Target Start/End: Original strand, 31281364 - 31281649
Alignment:
Q  23 tgttaagtaatttgctgtttattactttattcttttaccttttgggatctaaagtcaaaattgcatgcagttgtacaaacaatgtatttctcaaatcgcc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31281364 tgttaagtaatttgctgtttattactttattcttttaccttttgggatctaaagtcaaaattgcatgcagttgtacaaacaatgtatttctcaaatcgcc 31281463  T
Q  123 cgatttagataagacgggtcaaattt-aaaaagtaaaactacattttggacgttctattttaatcggactaacaaaaatgtgtgcattgaagaactacat 221  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||| ||||||||||||||    
T  31281464 cgattaagataagacgggtcaaatttaaaaaagtaaaactacattttggacgttctatcttaatcgaacgaacaaaaatgtgtgcgttgaagaactacat 31281563  T
Q  222 gcagttttaaatgcattcaatccacatcctatcttttgtgacattagcagtggaataaaaaattttaaatttattcttaattgtga 307  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||| || |||||||||||||||||||||    
T  31281564 acagttttaaatgcattcaattcacatcctatcttttgtgacattagcagtataataaaaatttctaaatttattcttaattgtga 31281649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 331 - 627
Target Start/End: Original strand, 31281671 - 31281967
Alignment:
Q  331 gctagacttgcgttacgagattaacccatctcctggatttacttacgtaaaaggtaaagtagacgcacaaaatannnnnnnnatgtggtggccaatgttt 430  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |         ||||||| ||||| ||||    
T  31281671 gctagacttgcgttacgagattaacccatctcttgaatttacttacgtaaaaggtaaagtagacgcacaaatttttttttttatgtggtcgccaaggttt 31281770  T
Q  431 gaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaaggatccacaaaatattttaacgcagctaaagaagggtggtaa 530  Q
    ||||| | || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31281771 gaatcccagaccttgcatatattatgcattgtttttaccaagagagctaagctcacaaggatccacaaaatattttaacgcaactaaagaagggtggtaa 31281870  T
Q  531 acatgctacaattgaatggattagttatggttttcaagagttgatcaaaaccaatttcaaggtcaagcaataggctataacagtaactattcatctc 627  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31281871 acatgctacaattgaatggattagttatggttttcaagagttgatcaaaaccaatttcaaggtcaagcaataggctataacaataactattcatctc 31281967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 434 - 488
Target Start/End: Complemental strand, 8615075 - 8615021
Alignment:
Q  434 tctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaa 488  Q
    ||||||| |||||||||||||||||||||| |||| ||  |||||||||||||||    
T  8615075 tctcggaccttgcatatattatgcattgtccttaccaactgagctaagctcacaa 8615021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 491
Target Start/End: Complemental strand, 8683117 - 8683065
Alignment:
Q  439 gatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||||| ||||    
T  8683117 gatcttgcatatattatgcattgtctataccaactgagctaagctcacgagga 8683065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 24991836 - 24991780
Alignment:
Q  431 gaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcaca 487  Q
    ||||| || |||||||||||||||||||||||| |||| ||  ||||||||||||||    
T  24991836 gaatcccgtatcttgcatatattatgcattgtccttaccaactgagctaagctcaca 24991780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 492
Target Start/End: Complemental strand, 25888949 - 25888894
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcacaaggat 492  Q
    |||| |||||||||||||||||| ||| |||| ||  |||||||||||||||||||    
T  25888949 cggaccttgcatatattatgcatcgtccttaccaactgagctaagctcacaaggat 25888894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 39801755 - 39801701
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  39801755 cggatcttgcatatattatgcattgtccataccaactgagctaagctcacgagga 39801701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 414 - 456
Target Start/End: Original strand, 42219376 - 42219418
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatg 456  Q
    |||||||||| ||||||||| |||||| |||||||||||||||    
T  42219376 tgtggtggccgatgtttgaacctcggaccttgcatatattatg 42219418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 468
Target Start/End: Complemental strand, 3584263 - 3584222
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttac 468  Q
    |||||||||||| | |||||||||||||||||||||| ||||    
T  3584263 gtttgaatctcgtaccttgcatatattatgcattgtccttac 3584222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 488
Target Start/End: Complemental strand, 18714507 - 18714446
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaa 488  Q
    ||||||| | |||| |||||||||||||||||||||| |||| ||  |||||||||| ||||    
T  18714507 gtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctgacaa 18714446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 491
Target Start/End: Complemental strand, 37251240 - 37251199
Alignment:
Q  450 tattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  37251240 tattatgcattgtgtttactaagtgagctaagctcacgagga 37251199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 488
Target Start/End: Original strand, 42043068 - 42043129
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaa 488  Q
    |||||||||||||| |||  |||||||||||||||||  ||| ||  |||||||||||||||    
T  42043068 gtttgaatctcggaccttaaatatattatgcattgtccataccaactgagctaagctcacaa 42043129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Complemental strand, 46987135 - 46987086
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||| |||||||||||||||||||||| |||| ||  |||||||||||||    
T  46987135 cggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 46987086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Original strand, 3533025 - 3533069
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||||| |||||||  ||||||| |||||    
T  3533025 cttgcatatattatgcattgtccttactaactgagctaaactcac 3533069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 491
Target Start/End: Complemental strand, 5352384 - 5352324
Alignment:
Q  431 gaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||| |||| |||||||||| |||||| |||| ||  ||||||||||||| ||||    
T  5352384 gaatctcggaccttgtatatattatgtattgtccttaccaactgagctaagctcacgagga 5352324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 8237634 - 8237698
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| ||||||  ||| ||||||||||||||||| |||| || ||| |||||||||| ||||    
T  8237634 gtttgaacctcggactttgtatatattatgcattgtccttaccaacagaactaagctcacgagga 8237698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 10244786 - 10244722
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| | |||| ||||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  10244786 gtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 10244722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Original strand, 21050239 - 21050283
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||||| |||| ||  |||||||||||||    
T  21050239 cttgcatatattatgcattgtccttaccaactgagctaagctcac 21050283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 463
Target Start/End: Original strand, 21928108 - 21928156
Alignment:
Q  415 gtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||| ||| ||||||||||| || |||||||| |||||||||||||    
T  21928108 gtggtggtcaaggtttgaatctcagaccttgcataaattatgcattgtc 21928156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 463
Target Start/End: Complemental strand, 25149442 - 25149406
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||||| || ||||||||||||||||||||||||    
T  25149442 gtttgaatcccgaatcttgcatatattatgcattgtc 25149406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 487
Target Start/End: Complemental strand, 34885921 - 34885873
Alignment:
Q  439 gatcttgcatatattatgcattgtctttactaagagagctaagctcaca 487  Q
    |||||||||||||| |||||||||||| || ||  ||||||||||||||    
T  34885921 gatcttgcatatatcatgcattgtcttcaccaactgagctaagctcaca 34885873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 37930103 - 37930039
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||| || ||| |||||||||||||||||||| |||| ||  ||| ||||||||| ||||    
T  37930103 gtttgaatcccgaatcctgcatatattatgcattgtccttaccaactgagataagctcacgagga 37930039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 485
Target Start/End: Complemental strand, 20079794 - 20079723
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctca 485  Q
    |||||||||| | |||||||||| |||||||||||||||||| |||||||| ||||||  ||| ||||||||    
T  20079794 tgtggtggccgaggtttgaatcttggatcttgcatatattatacattgtctctactaactgagttaagctca 20079723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 47377338 - 47377410
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||| |||| | |||| ||||||||||||||||| |||| ||  ||| |||||||||    
T  47377338 tgtggtggccaatgtttgaacctcgaaccttgtatatattatgcattgtccttaccaactgagttaagctcac 47377410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 22843504 - 22843458
Alignment:
Q  446 catatattatgcattgtctttactaagagagctaagctcacaaggat 492  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||    
T  22843504 catatattatgcattgtctttactaactgagctaagctcacatggat 22843458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 437 - 486
Target Start/End: Original strand, 8113574 - 8113623
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    ||||||||||||||||||||||||||| |||| ||  |||||||||||||    
T  8113574 cggatcttgcatatattatgcattgtccttaccaactgagctaagctcac 8113623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 491
Target Start/End: Original strand, 18870714 - 18870791
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||| | |||||||||  ||| ||||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  18870714 tgtggtggccgaggtttgaatcatggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 18870791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 491
Target Start/End: Complemental strand, 45432020 - 45431943
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||  ||||||| | |||| ||||||||||||||||||||||  ||| ||  |||||||||| |||||||    
T  45432020 tgtggtggccagggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaagctaacaagga 45431943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 491
Target Start/End: Complemental strand, 5349598 - 5349523
Alignment:
Q  416 tggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||  ||||||| |||||| ||||||||||| |||||||||| |||| ||| ||| ||| ||||| ||||    
T  5349598 tggtggccagggtttgaacctcggaccttgcatatataatgcattgtccttaccaagtgagttaaactcacgagga 5349523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 483
Target Start/End: Original strand, 40575612 - 40575667
Alignment:
Q  428 tttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagct 483  Q
    |||||| | |||| ||||||||||||||||||||||| ||||||  ||||||||||    
T  40575612 tttgaaccccggaccttgcatatattatgcattgtctatactaattgagctaagct 40575667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 463
Target Start/End: Original strand, 12746361 - 12746395
Alignment:
Q  429 ttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||||||| ||||||||||||||||||||||    
T  12746361 ttgaatctcggaccttgcatatattatgcattgtc 12746395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 491
Target Start/End: Original strand, 33633330 - 33633384
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||| ||||||||||||||||||| ||||||  ||| ||||||||| ||||    
T  33633330 cggatcttacatatattatgcattgtctatactaactgagttaagctcacgagga 33633384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Original strand, 1149086 - 1149135
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||| |||| ||  ||||||||||||| ||||    
T  1149086 cttgcatatattatgcattgtccttaccaactgagctaagctcacgagga 1149135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 492
Target Start/End: Original strand, 5428438 - 5428503
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaaggat 492  Q
    |||||||||  ||| ||||||||||||||||||||| ||||  ||  ||||||| |||||||||||    
T  5428438 gtttgaatcctggaccttgcatatattatgcattgtttttatcaattgagctaaactcacaaggat 5428503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Original strand, 16980371 - 16980420
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||| |||| ||  ||||||||||||| ||||    
T  16980371 cttgcatatattatgcattgtccttaccaactgagctaagctcacgagga 16980420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 24120422 - 24120487
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgca-ttgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| | |||||||||||||||||||||| |||||| ||| ||  ||||||||||||| ||||    
T  24120422 gtttgaaccgcggatcttgcatatattatgcatttgtctctaccaactgagctaagctcacgagga 24120487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 53996343 - 53996294
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||||||||||||  ||| ||  ||||||||||||||||||    
T  53996343 cttgcatatattatgcattgtccataccaactgagctaagctcacaagga 53996294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 463
Target Start/End: Original strand, 10922310 - 10922346
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||| | |||||||||||||||||||||||||||    
T  10922310 gtttgaaccccggatcttgcatatattatgcattgtc 10922346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 22366035 - 22365991
Alignment:
Q  423 caatgtttgaatctcggatcttgcatatattatgcattgtcttta 467  Q
    |||||||||||||| ||| |||||||||||||| |||| ||||||    
T  22366035 caatgtttgaatcttggaacttgcatatattatacattatcttta 22365991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 22722461 - 22722397
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| |||||| ||||||||| |||||||||||   ||||||  ||||||||||||| ||||    
T  22722461 gtttgaacctcggaccttgcatattttatgcattgttcatactaactgagctaagctcacgagga 22722397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 38130961 - 38131025
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| | |||| ||||||||||||||||||||||  ||| ||  ||| ||||||||||||||    
T  38130961 gtttgaaccccggaccttgcatatattatgcattgtccataccaactgagttaagctcacaagga 38131025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 414 - 492
Target Start/End: Complemental strand, 17704085 - 17704007
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaaggat 492  Q
    |||||||||| | ||||||||| | || |||||||||||||||||||||| |||| ||  ||||||||||||| |||||    
T  17704085 tgtggtggccgaggtttgaatcacagaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggat 17704007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 463
Target Start/End: Original strand, 24696008 - 24696044
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||||||||||||||||||||||||||||||||    
T  24696008 gtttgaatctcggatcttgcatatattatgcattgtc 24696044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 13286180 - 13286126
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||||||||| ||| ||  ||||||||||||| ||||    
T  13286180 cggatcttgcatatattatgcattgtctataccaactgagctaagctcacgagga 13286126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 437 - 485
Target Start/End: Complemental strand, 15438502 - 15438454
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctca 485  Q
    |||| |||||||||||||||||||||| |||| ||| ||||||||||||    
T  15438502 cggaccttgcatatattatgcattgtccttaccaagtgagctaagctca 15438454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 437 - 485
Target Start/End: Complemental strand, 15529806 - 15529758
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctca 485  Q
    |||| |||||||||||||||||||||| |||| ||| ||||||||||||    
T  15529806 cggaccttgcatatattatgcattgtccttaccaagtgagctaagctca 15529758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 481
Target Start/End: Original strand, 11603854 - 11603893
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaag 481  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  11603854 cttgcatatattatgcattgtccttactaacagagctaag 11603893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 18147528 - 18147479
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||||| ||||||||||| | |||||| ||||| ||||||||||||    
T  18147528 tgtggtggccgatgtttgaatcccagatctttcatattttatgcattgtc 18147479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Complemental strand, 19778114 - 19778065
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||| |||||||||||||||||||||| |||| ||  |||||||||||||    
T  19778114 cggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 19778065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Original strand, 21589190 - 21589239
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||| |||| ||||||||| |||| ||| ||||||||||||||||||    
T  21589190 tgtggtgtccaaggtttgaatcccggaccttccatatattatgcattgtc 21589239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 487
Target Start/End: Complemental strand, 30623337 - 30623292
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcaca 487  Q
    |||||||||||||||||||||| |||| ||  ||||||||||||||    
T  30623337 cttgcatatattatgcattgtccttaccaactgagctaagctcaca 30623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 33743647 - 33743598
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||||| | ||||||| |||||| ||||||||| ||||||||||||    
T  33743647 tgtggtggccgaagtttgaacctcggaccttgcatattttatgcattgtc 33743598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Original strand, 37015853 - 37015902
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||| ||||    
T  37015853 cttgcatatattatgcattgtctctaccaactgagctaagctcacgagga 37015902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 468
Target Start/End: Original strand, 42208471 - 42208512
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttac 468  Q
    ||||||| |||||| |||||||||||||||||||||| ||||    
T  42208471 gtttgaacctcggaccttgcatatattatgcattgtccttac 42208512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 6898136 - 6898176
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtcttta 467  Q
    |||| |||||||| ||||| |||||||||||||||||||||    
T  6898136 gtttaaatctcgggtcttgaatatattatgcattgtcttta 6898176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 463
Target Start/End: Complemental strand, 10601822 - 10601786
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||||| || ||||||||||||||||||||||||    
T  10601822 gtttgaatcccgaatcttgcatatattatgcattgtc 10601786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 11709045 - 11708981
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||  ||||| ||||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  11709045 gtttgaacttcggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 11708981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 463
Target Start/End: Original strand, 13357431 - 13357479
Alignment:
Q  415 gtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||||| | ||||||| |||| | ||||||||||||||||||||||    
T  13357431 gtggtggccgaggtttgaacctcgtaccttgcatatattatgcattgtc 13357479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 463
Target Start/End: Complemental strand, 15020832 - 15020784
Alignment:
Q  415 gtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||||||  ||||||| | ||||||||||||||||||| |||||||    
T  15020832 gtggtggccagggtttgaaccccggatcttgcatatattatacattgtc 15020784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 491
Target Start/End: Complemental strand, 23816837 - 23816785
Alignment:
Q  439 gatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||| || |||| ||  ||||||||||||| ||||    
T  23816837 gatcttgcatatattatgcattatccttaccaactgagctaagctcacgagga 23816785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 27587280 - 27587216
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| | |||| ||||||||||| |||||||||| |||| ||  ||||||||||||| ||||    
T  27587280 gtttgaaccccggaccttgcatatatcatgcattgtccttaccaactgagctaagctcacgagga 27587216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 491
Target Start/End: Complemental strand, 44293622 - 44293570
Alignment:
Q  439 gatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||| ||||||||||||||||||| ||| ||  ||||||||||||| ||||    
T  44293622 gatcttacatatattatgcattgtctataccaactgagctaagctcacgagga 44293570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 418 - 463
Target Start/End: Complemental strand, 2692283 - 2692238
Alignment:
Q  418 gtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  2692283 gtggccagggtttgaatctcggatcttgcatatattatgcattgtc 2692238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 471
Target Start/End: Original strand, 3808120 - 3808164
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaa 471  Q
    |||||||||||||| |||||||||||||||||||||| |||||||    
T  3808120 gtttgaatctcggaccttgcatatattatgcattgtccttactaa 3808164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 463
Target Start/End: Original strand, 6864135 - 6864171
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||| ||||||||||||||||||||||||||||    
T  6864135 gtttgaatatcggatcttgcatatattatgcattgtc 6864171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 491
Target Start/End: Original strand, 7083006 - 7083058
Alignment:
Q  439 gatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||||||||||||||| |||| ||  ||||||||||||| ||||    
T  7083006 gatcttgcatatattatgcattgtccttaccaattgagctaagctcacgagga 7083058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 8809365 - 8809325
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtcttta 467  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  8809365 gtttgaacctcggatcttgcatatattatgcattgttttta 8809325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 491
Target Start/End: Original strand, 655761 - 655815
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||| ||||||||||||||||||||||  ||| ||  ||||||||||||||||||    
T  655761 cggaccttgcatatattatgcattgtcgataccaactgagctaagctcacaagga 655815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 464
Target Start/End: Original strand, 1918448 - 1918497
Alignment:
Q  415 gtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtct 464  Q
    ||||||||  ||||| ||| |||||| |||||||||||||||||||||||    
T  1918448 gtggtggctgatgttcgaacctcggaccttgcatatattatgcattgtct 1918497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Complemental strand, 4450311 - 4450262
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||| ||||||||||||||||||||||||||  ||  |||||||||||||    
T  4450311 cggaccttgcatatattatgcattgtctttatcaactgagctaagctcac 4450262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 464
Target Start/End: Original strand, 8130461 - 8130498
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtct 464  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  8130461 gtttgaatctcggaccttgcatattttatgcattgtct 8130498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 8810684 - 8810635
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||||| ||||||||||| ||  ||||||||||||| ||||    
T  8810684 cttgcatatattatgtattgtctttaccaactgagctaagctcacgagga 8810635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 491
Target Start/End: Complemental strand, 9923312 - 9923235
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| |||| ||||||||| || | |||| ||||||||||||||||| |||  ||  ||||||| ||||||||||    
T  9923312 tgtggtgtccaaggtttgaatcccgaaccttgtatatattatgcattgtccttatcaattgagctaaactcacaagga 9923235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 468
Target Start/End: Complemental strand, 31971588 - 31971547
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttac 468  Q
    ||||||| |||||| |||||||||||||||||||||| ||||    
T  31971588 gtttgaacctcggaccttgcatatattatgcattgtccttac 31971547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 1606707 - 1606659
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgt 462  Q
    ||||||||||   |||||||||||||||||||||||| |||| ||||||    
T  1606707 tgtggtggccggagtttgaatctcggatcttgcatattttatacattgt 1606659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 6142763 - 6142719
Alignment:
Q  423 caatgtttgaatctcggatcttgcatatattatgcattgtcttta 467  Q
    |||||||||||  ||||||| ||||||||||||||||| ||||||    
T  6142763 caatgtttgaacatcggatcatgcatatattatgcattatcttta 6142719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 463
Target Start/End: Original strand, 8637439 - 8637475
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  8637439 gtttgaacctcggaccttgcatatattatgcattgtc 8637475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 487
Target Start/End: Original strand, 18254107 - 18254163
Alignment:
Q  431 gaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcaca 487  Q
    ||||| |||| ||||||| |||||||||||||| |||| ||  ||||||||||||||    
T  18254107 gaatcccggaccttgcatgtattatgcattgtccttaccaactgagctaagctcaca 18254163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000004; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 414 - 491
Target Start/End: Complemental strand, 7230352 - 7230275
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||| | ||||||| | |||| |||||||||||||||||||||| |||| ||  ||||||||||||| ||||    
T  7230352 tgtggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctcacgagga 7230275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 19854614 - 19854560
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||||||||  ||| ||  ||||||||||||||||||    
T  19854614 cggatcttgcatatattatgcattgtccataccaactgagctaagctcacaagga 19854560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 485
Target Start/End: Complemental strand, 37921805 - 37921747
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctca 485  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||  ||||||| ||||    
T  37921805 gtttgaatcccggaccttgcatatattatgcattgtccttactaactgagctaaactca 37921747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 437 - 486
Target Start/End: Original strand, 7922262 - 7922311
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||||||||||||||| ||  ||| |||||||||    
T  7922262 cggatcttgcatatattatgcattgtctttaccaactgagataagctcac 7922311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 491
Target Start/End: Original strand, 50362128 - 50362205
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||| ||||||| |  ||| ||||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  50362128 tgtggtggccaaggtttgaaccctggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 50362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 486
Target Start/End: Complemental strand, 54500641 - 54500569
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||| || |||||||| | |||| ||| ||||||||||||||||||| ||| ||  |||||||||||||    
T  54500641 tgtggtggtcagtgtttgaaccccggaccttacatatattatgcattgtctctaccaactgagctaagctcac 54500569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 491
Target Start/End: Complemental strand, 36203290 - 36203231
Alignment:
Q  432 aatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||| |||||||||||||||||||||| |||  ||  ||||||||||||| ||||    
T  36203290 aatctcggaccttgcatatattatgcattgtccttatcaactgagctaagctcacgagga 36203231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 456
Target Start/End: Complemental strand, 42594603 - 42594572
Alignment:
Q  425 atgtttgaatctcggatcttgcatatattatg 456  Q
    ||||||||||||||||||||||||||||||||    
T  42594603 atgtttgaatctcggatcttgcatatattatg 42594572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 481
Target Start/End: Original strand, 56551581 - 56551648
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaag 481  Q
    ||||||||||   ||||||| |||||| |||||||||||||||||||||| |||| ||  ||||||||    
T  56551581 tgtggtggccggggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagctaag 56551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 491
Target Start/End: Original strand, 10303523 - 10303577
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||| |||||||||||| |||| ||  ||||||||||||| ||||    
T  10303523 cggatcttgcatattttatgcattgtccttaccaactgagctaagctcacgagga 10303577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 427 - 485
Target Start/End: Original strand, 11286783 - 11286841
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctca 485  Q
    ||||||||||| || ||||||||||||||||||||||| ||| ||  || |||||||||    
T  11286783 gtttgaatctcagaccttgcatatattatgcattgtctctaccaactgaactaagctca 11286841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 442 - 492
Target Start/End: Complemental strand, 31780789 - 31780739
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaaggat 492  Q
    ||||||||| |||||||||||| |||| ||  |||||||||||||||||||    
T  31780789 cttgcatattttatgcattgtccttaccaactgagctaagctcacaaggat 31780739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 427 - 497
Target Start/End: Complemental strand, 37193308 - 37193238
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaaggatccaca 497  Q
    ||||||| | |||| |||||||||||||| |||||||  ||||||  ||||||||||||| ||||| ||||    
T  37193308 gtttgaaccccggaccttgcatatattatacattgtccatactaactgagctaagctcacgaggattcaca 37193238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 6087791 - 6087742
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||||||||| ||| ||| ||  ||||||||||||||||||    
T  6087791 cttgcatatattatgcattatctataccaactgagctaagctcacaagga 6087742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Complemental strand, 6520115 - 6520086
Alignment:
Q  442 cttgcatatattatgcattgtctttactaa 471  Q
    ||||||||||||||||||||||||||||||    
T  6520115 cttgcatatattatgcattgtctttactaa 6520086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 491
Target Start/End: Complemental strand, 12322745 - 12322668
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||  | ||||||| | |||| ||||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  12322745 tgtggtggctgaggtttgaaccccggaacttgcatatattatgcattgtccgtaccaactgagctaagctcacgagga 12322668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 467
Target Start/End: Original strand, 16733508 - 16733561
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtcttta 467  Q
    |||||||||| | | ||||| ||||||||||||||||||||| |||| ||||||    
T  16733508 tgtggtggccgagggttgaacctcggatcttgcatatattatacattatcttta 16733561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 34247484 - 34247435
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||| |||| ||  ||||||| ||||||||||    
T  34247484 cttgcatatattatgcattgtccttaccaactgagctaaactcacaagga 34247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 10006384 - 10006340
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    ||||||||||||||||||||||||||| ||  || ||||||||||    
T  10006384 cttgcatatattatgcattgtctttaccaaatgacctaagctcac 10006340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 463
Target Start/End: Original strand, 16304100 - 16304136
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  16304100 gtttgaatcccggaccttgcatatattatgcattgtc 16304136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 19479479 - 19479543
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| | |||| |||||||||||||||||||||   || |||  ||||||||||||||||||    
T  19479479 gtttgaaccccggaccttgcatatattatgcattgttcatattaactgagctaagctcacaagga 19479543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 487
Target Start/End: Complemental strand, 19908743 - 19908691
Alignment:
Q  435 ctcggatcttgcatatattatgcattgtctttactaagagagctaagctcaca 487  Q
    |||||| |||||||||||||||||||||| |||| ||  ||| ||||||||||    
T  19908743 ctcggaccttgcatatattatgcattgtccttaccaactgagttaagctcaca 19908691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 487
Target Start/End: Complemental strand, 20383547 - 20383487
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcaca 487  Q
    ||||||| | |||| ||||||||||||||||||||||  ||| ||  ||||||||||||||    
T  20383547 gtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcaca 20383487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 20799396 - 20799460
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| | |||| ||||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  20799396 gtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 20799460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Original strand, 21317355 - 21317399
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    ||||||||||||||||||||||| ||| ||  |||||||||||||    
T  21317355 cttgcatatattatgcattgtctctaccaactgagctaagctcac 21317399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 485
Target Start/End: Original strand, 22279536 - 22279580
Alignment:
Q  441 tcttgcatatattatgcattgtctttactaagagagctaagctca 485  Q
    ||||||||||||||||||||||| |||| ||  ||||||||||||    
T  22279536 tcttgcatatattatgcattgtccttaccaactgagctaagctca 22279580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 42344607 - 42344655
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgt 462  Q
    |||||||| | ||||||||| |||||| |||||||||||||| ||||||    
T  42344607 tgtggtggtcgatgtttgaacctcggaccttgcatatattatacattgt 42344655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 437 - 485
Target Start/End: Original strand, 46676510 - 46676558
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctca 485  Q
    |||| |||||||||||||||||||||| |||| ||  ||||||||||||    
T  46676510 cggaccttgcatatattatgcattgtccttaccaactgagctaagctca 46676558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 486
Target Start/End: Original strand, 56088086 - 56088134
Alignment:
Q  438 ggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    ||||||||||||||||||| |||||| |||| ||  |||||||||||||    
T  56088086 ggatcttgcatatattatgtattgtccttaccaattgagctaagctcac 56088134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Original strand, 56497625 - 56497669
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||||| |||| ||  |||||||||||||    
T  56497625 cttgcatatattatgcattgtccttaccaattgagctaagctcac 56497669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 414 - 491
Target Start/End: Complemental strand, 1794668 - 1794591
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||| | | ||||||| | |||||||||||||||||||||||||||  ||||||  ||||||||||||| ||||    
T  1794668 tgtggtggtcgaggtttgaaccccggatcttgcatatattatgcattgtccatactaactgagctaagctcacgagga 1794591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 428 - 491
Target Start/End: Complemental strand, 34632227 - 34632164
Alignment:
Q  428 tttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||| ||||||||||||||||||||| |||||||| ||| ||  ||||||||||||| ||||    
T  34632227 tttgaacctcggatcttgcatatattatacattgtctataccaactgagctaagctcacgagga 34632164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 468
Target Start/End: Complemental strand, 46707944 - 46707890
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttac 468  Q
    |||||||||| ||||||||| | |||| |||||||||||||||||||||| ||||    
T  46707944 tgtggtggccgatgtttgaaccccggaacttgcatatattatgcattgtccttac 46707890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 485
Target Start/End: Original strand, 15854077 - 15854148
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctca 485  Q
    |||||||||| | |||||||||  |||||||||||||||||||||| |||  ||| ||  ||||||||||||    
T  15854077 tgtggtggccgaggtttgaatcctggatcttgcatatattatgcatcgtccataccaactgagctaagctca 15854148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 28032334 - 28032279
Alignment:
Q  436 tcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||| ||||||||||||||||||||| ||||||||  ||||||| ||||| ||||    
T  28032334 tcggaccttgcatatattatgcattgtttttactaaccgagctaaactcacgagga 28032279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 491
Target Start/End: Original strand, 52441523 - 52441577
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||| ||||||||||||||||||||||| ||| ||  ||||||||||||| ||||    
T  52441523 cggaccttgcatatattatgcattgtctataccaactgagctaagctcacgagga 52441577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Original strand, 9639829 - 9639878
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||| |||||||||||||||||||||| |||| ||| ||| |||||||||    
T  9639829 cggaccttgcatatattatgcattgtccttaccaagtgagttaagctcac 9639878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 488
Target Start/End: Original strand, 34521180 - 34521253
Alignment:
Q  415 gtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaa 488  Q
    ||||||||| | ||||||| | |||| ||||||||||||||||||||||  ||| ||  ||||||| |||||||    
T  34521180 gtggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaaactcacaa 34521253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Original strand, 38448878 - 38448927
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||| |||||||||||||||||||||| |||| ||  |||||||||||||    
T  38448878 cggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 38448927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 460
Target Start/End: Complemental strand, 49868070 - 49868037
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcatt 460  Q
    |||||||||||||| |||||||||||||||||||    
T  49868070 gtttgaatctcggaccttgcatatattatgcatt 49868037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 463
Target Start/End: Original strand, 6000145 - 6000181
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  6000145 gtttgaacctcggaccttgcatatattatgcattgtc 6000181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 11014291 - 11014227
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||| || ||||||||||||||||||| ||||| ||| ||  ||||||| ||||| ||||    
T  11014291 gtttgaatcccgaatcttgcatatattatgcactgtctctaccaactgagctaaactcacgagga 11014227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 17283995 - 17283951
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||||| |||| ||  |||||||||||||    
T  17283995 cttgcatatattatgcattgtccttaccaactgagctaagctcac 17283951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 464
Target Start/End: Original strand, 27687615 - 27687651
Alignment:
Q  428 tttgaatctcggatcttgcatatattatgcattgtct 464  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  27687615 tttgaatctcgtatcttgtatatattatgcattgtct 27687651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 33153882 - 33153946
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| |||||| ||| ||||||||||||||||||  ||| ||  ||| ||||||||||||||    
T  33153882 gtttgaacctcggaccttacatatattatgcattgtccctaccaactgagttaagctcacaagga 33153946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 34733444 - 34733400
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||||| |||| ||  |||||||||||||    
T  34733444 cttgcatatattatgcattgtccttaccaactgagctaagctcac 34733400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000009; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 479
Target Start/End: Complemental strand, 23219032 - 23218967
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagcta 479  Q
    |||||||||| | ||||||| |||||| ||||||||| |||| |||||||||||| ||| ||||||    
T  23219032 tgtggtggccgaagtttgaacctcggaccttgcatattttatacattgtctttaccaagtgagcta 23218967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 467
Target Start/End: Original strand, 31305875 - 31305928
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtcttta 467  Q
    ||||| ||||||||||||||  ||||| ||| ||||||||||||||||||||||    
T  31305875 tgtggcggccaatgtttgaacttcggaccttacatatattatgcattgtcttta 31305928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 491
Target Start/End: Complemental strand, 1642381 - 1642329
Alignment:
Q  439 gatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||||| ||||| ||  |||||| |||||||||||    
T  1642381 gatcttgcatatattatgcattgtttttaccaactgagctatgctcacaagga 1642329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 471
Target Start/End: Complemental strand, 18557913 - 18557869
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaa 471  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||    
T  18557913 gtttgaatctcggaccttgcacatattatgcattgtccttactaa 18557869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 488
Target Start/End: Complemental strand, 20927697 - 20927637
Alignment:
Q  428 tttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaa 488  Q
    |||||| |||||||||||||||||||||| ||||||  ||| ||  |||||||||||||||    
T  20927697 tttgaacctcggatcttgcatatattatgtattgtccataccaactgagctaagctcacaa 20927637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 37614416 - 37614488
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||| | ||||||| |||| | |||||||||||||||| |||||| ||| ||  |||||||||||||    
T  37614416 tgtggtggccgaagtttgaacctcgaaccttgcatatattatgcgttgtctctaccaactgagctaagctcac 37614488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 487
Target Start/End: Original strand, 9123856 - 9123907
Alignment:
Q  436 tcggatcttgcatatattatgcattgtctttactaagagagctaagctcaca 487  Q
    ||||||||| ||||||||||||||||||||||| ||  ||| ||||||||||    
T  9123856 tcggatcttacatatattatgcattgtctttaccaactgagttaagctcaca 9123907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 13409472 - 13409429
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctca 485  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||    
T  13409472 cttgcatatattatgcattgtctttactaactgagctaaactca 13409429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 427 - 493
Target Start/End: Original strand, 16701583 - 16701649
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaaggatc 493  Q
    ||||||||| |||| |||||||||||||| |||||||  ||| ||  ||||||||||||| ||||||    
T  16701583 gtttgaatcccggaccttgcatatattattcattgtccctaccaactgagctaagctcacgaggatc 16701649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 18331756 - 18331702
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||| ||||||||| ||||||||||||  ||| ||| ||||||||||||||||||    
T  18331756 cggaccttgcatattttatgcattgtccataccaagtgagctaagctcacaagga 18331702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 3389234 - 3389185
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||| ||||| ||||||||| | | |||||||||||||||||||||||||    
T  3389234 tgtgatggccgatgtttgaaccccagatcttgcatatattatgcattgtc 3389185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 491
Target Start/End: Complemental strand, 5485258 - 5485181
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||| ||| ||| | ||||  |||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  5485258 tgtggtggccaaggttagaaccccggacattgcatatattatgcattgtccctaccaactgagctaagctcacgagga 5485181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Original strand, 18489093 - 18489142
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||||||||||||| ||| ||  ||||||| ||||||||||    
T  18489093 cttgcatatattatgcattgtctataccaactgagctaaactcacaagga 18489142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 30893977 - 30893928
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||||||||||||||||| ||  ||| ||||||||| ||||    
T  30893977 cttgcatatattatgcattgtctttacaaactgagttaagctcacgagga 30893928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Original strand, 36321511 - 36321560
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||| |||| ||  ||||||||||||| ||||    
T  36321511 cttgcatatattatgcattgtccttaccaactgagctaagctcacgagga 36321560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 491
Target Start/End: Complemental strand, 37932402 - 37932325
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||  ||| ||| | |||| ||||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  37932402 tgtggtggccagggttcgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 37932325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 10704333 - 10704397
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| | |||| ||||||||| ||||||||||||  ||| ||  ||||||||||||||||||    
T  10704333 gtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacaagga 10704397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Original strand, 16133082 - 16133126
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||||| |||| ||  |||||||||||||    
T  16133082 cttgcatatattatgcattgtccttaccaactgagctaagctcac 16133126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 463
Target Start/End: Complemental strand, 17046385 - 17046357
Alignment:
Q  435 ctcggatcttgcatatattatgcattgtc 463  Q
    |||||||||||||||||||||||||||||    
T  17046385 ctcggatcttgcatatattatgcattgtc 17046357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Original strand, 17338720 - 17338764
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    ||||||||||||||| ||||||||||| ||  |||||||||||||    
T  17338720 cttgcatatattatgtattgtctttaccaattgagctaagctcac 17338764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 443 - 491
Target Start/End: Complemental strand, 19248522 - 19248474
Alignment:
Q  443 ttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||||||||||||||||||| ||| ||  ||||||||||||| ||||    
T  19248522 ttgcatatattatgcattgtctataccaactgagctaagctcacgagga 19248474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 463
Target Start/End: Complemental strand, 22394094 - 22394058
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  22394094 gtttgaacctcggatcttacatatattatgcattgtc 22394058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 22522803 - 22522867
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| | |||| ||||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  22522803 gtttgaaccccggaccttgcatatattatgcattgtccataccaaccgagctaagctcacgagga 22522867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 27679542 - 27679498
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    ||||||||||||||||||| ||||||| ||  |||||||||||||    
T  27679542 cttgcatatattatgcattatctttaccaactgagctaagctcac 27679498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 443 - 491
Target Start/End: Original strand, 40056608 - 40056656
Alignment:
Q  443 ttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||||||||||| |||| ||  ||| ||||||||||||||    
T  40056608 ttgcatatattatgcattgtccttaccaactgagttaagctcacaagga 40056656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000009; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 36359386 - 36359337
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||||||| ||||||| | |||| ||||||||||||||||||||||    
T  36359386 tgtggtggccaaggtttgaaccccggaccttgcatatattatgcattgtc 36359337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 491
Target Start/End: Complemental strand, 7206176 - 7206120
Alignment:
Q  435 ctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    |||||| ||||||||||||||||||||||| ||| ||  ||||||||||||| ||||    
T  7206176 ctcggaccttgcatatattatgcattgtctctaccaactgagctaagctcacgagga 7206120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 32204616 - 32204568
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgt 462  Q
    |||||||||| | ||| |||||| |||||||||||||||||||||||||    
T  32204616 tgtggtggccgaggttcgaatcttggatcttgcatatattatgcattgt 32204568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 487
Target Start/End: Complemental strand, 14944208 - 14944161
Alignment:
Q  440 atcttgcatatattatgcattgtctttactaagagagctaagctcaca 487  Q
    ||||| |||||||||||||||||| |||||||| ||| ||||||||||    
T  14944208 atcttacatatattatgcattgtccttactaagtgagttaagctcaca 14944161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 489
Target Start/End: Original strand, 20120738 - 20120785
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaag 489  Q
    |||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  20120738 cttgcatatattatgcattgtccttaccaactgagctaagctcacaag 20120785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 487
Target Start/End: Complemental strand, 4056839 - 4056789
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcaca 487  Q
    |||| |||||||||||||||||||||| |||| ||  ||||||||||||||    
T  4056839 cggaccttgcatatattatgcattgtccttaccaaccgagctaagctcaca 4056789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 414 - 488
Target Start/End: Complemental strand, 13000757 - 13000683
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaa 488  Q
    |||||| ||| | |||| || |||||| ||| ||||||||||||||| ||||||| ||  |||||||||||||||    
T  13000757 tgtggtagccgaggtttaaacctcggaccttacatatattatgcattatctttaccaactgagctaagctcacaa 13000683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 468
Target Start/End: Complemental strand, 4138050 - 4138009
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttac 468  Q
    |||||||||||||| |||||||||||||| ||||||| ||||    
T  4138050 gtttgaatctcggaccttgcatatattatacattgtccttac 4138009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 491
Target Start/End: Complemental strand, 4238799 - 4238754
Alignment:
Q  446 catatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||||||||  ||||||  ||||||||||||||||||    
T  4238799 catatattatgcattgtccatactaactgagctaagctcacaagga 4238754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Complemental strand, 24593425 - 24593376
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||| |||||||||||||||||||||| |||| ||  |||||||||||||    
T  24593425 cggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 24593376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Complemental strand, 28771631 - 28771582
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    ||||||||||||||||||||||||||| |||| ||  ||||||| |||||    
T  28771631 cggatcttgcatatattatgcattgtccttaccaactgagctaaactcac 28771582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 30045525 - 30045476
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||||| | |||||||||||| | |||| |||||||||||||||||    
T  30045525 tgtggtggccgaggtttgaatctcgaaccttgtatatattatgcattgtc 30045476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 30050688 - 30050639
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||||| | |||||||||||| | |||| |||||||||||||||||    
T  30050688 tgtggtggccgaggtttgaatctcgaaccttgtatatattatgcattgtc 30050639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Complemental strand, 30141732 - 30141683
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||||| | |||||||||||| | |||| |||||||||||||||||    
T  30141732 tgtggtggccgaggtttgaatctcgaaccttgtatatattatgcattgtc 30141683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 493
Target Start/End: Original strand, 30762510 - 30762563
Alignment:
Q  440 atcttgcatatattatgcattgtctttactaagagagctaagctcacaaggatc 493  Q
    ||||||||||| ||||||||||||| ||| ||  ||||||| ||||||||||||    
T  30762510 atcttgcatattttatgcattgtctataccaactgagctaaactcacaaggatc 30762563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Original strand, 39068720 - 39068769
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    ||||||||||||||||||||||||||| |||  ||  |||||||||||||    
T  39068720 cggatcttgcatatattatgcattgtccttatcaactgagctaagctcac 39068769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Original strand, 43004671 - 43004720
Alignment:
Q  414 tgtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtc 463  Q
    |||||||||||   ||||||| ||||| ||||||||||||||||||||||    
T  43004671 tgtggtggccaggatttgaatttcggaccttgcatatattatgcattgtc 43004720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Original strand, 18231490 - 18231534
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||||| |||| ||  |||||||||||||    
T  18231490 cttgcatatattatgcattgtccttaccaactgagctaagctcac 18231534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 487
Target Start/End: Original strand, 18324908 - 18324956
Alignment:
Q  439 gatcttgcatatattatgcattgtctttactaagagagctaagctcaca 487  Q
    ||||||||||||||||||||||||| |||| ||  ||| ||||||||||    
T  18324908 gatcttgcatatattatgcattgtccttaccaactgagttaagctcaca 18324956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Original strand, 19179067 - 19179111
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||||| |||| ||  |||||||||||||    
T  19179067 cttgcatatattatgcattgtccttaccaactgagctaagctcac 19179111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 22608571 - 22608527
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    ||||||||||||||||||||||| ||| ||  |||||||||||||    
T  22608571 cttgcatatattatgcattgtctctaccaactgagctaagctcac 22608527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 29544686 - 29544622
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| | |||| ||||||||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  29544686 gtttgaaccccggaccttgcatatattatgcattgtccctaccaattgagctaagctcactagga 29544622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 491
Target Start/End: Original strand, 35820291 - 35820367
Alignment:
Q  415 gtggtggccaatgtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||| | ||||||| | |||| ||||||| ||||||||||||||  ||| ||  ||||||||||||| ||||    
T  35820291 gtggtggccgaggtttgaaccccggaccttgcatgtattatgcattgtccctaccaactgagctaagctcacgagga 35820367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 442 - 486
Target Start/End: Original strand, 37320534 - 37320578
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  37320534 cttgcatatattatgcattgtctttaccaactgagttaagctcac 37320578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 42181305 - 42181345
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtcttta 467  Q
    |||||||||||| | ||||||||||| ||||||||||||||    
T  42181305 gtttgaatctcgaaccttgcatatatcatgcattgtcttta 42181345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 44526187 - 44526123
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||| |||| ||||| ||||||||||||||||  ||| ||  ||||||||||||| ||||    
T  44526187 gtttgaatcccggaccttgcgtatattatgcattgtccataccaactgagctaagctcacgagga 44526123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 467
Target Start/End: Original strand, 7234 - 7278
Alignment:
Q  423 caatgtttgaatctcggatcttgcatatattatgcattgtcttta 467  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||    
T  7234 caatgtttgaatatcggatcatgcatatattatgcattatcttta 7278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 467
Target Start/End: Original strand, 7252 - 7296
Alignment:
Q  423 caatgtttgaatctcggatcttgcatatattatgcattgtcttta 467  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||    
T  7252 caatgtttgaatatcggatcatgcatatattatgcattatcttta 7296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1619 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1619
Description:

Target: scaffold1619; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 464
Target Start/End: Complemental strand, 1090 - 1053
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtct 464  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  1090 gtttgaatcccggaccttgcatatattatgcattgtct 1053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 3185 - 3136
Alignment:
Q  442 cttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||||||||||| ||||||||||| ||  ||||||||||||| ||||    
T  3185 cttgcatatattatgtattgtctttaccaactgagctaagctcacgagga 3136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 486
Target Start/End: Original strand, 8864 - 8912
Alignment:
Q  438 ggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||||||||||| |||| ||  ||| |||||||||    
T  8864 ggatcttgcatatattatgcattgtccttaccaattgagttaagctcac 8912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 5241 - 5177
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| ||| || ||||||||||||||||||||||  ||| ||  ||||||| ||||||||||    
T  5241 gtttgaacctcagaccttgcatatattatgcattgtccataccaattgagctaaactcacaagga 5177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 486
Target Start/End: Complemental strand, 18341 - 18293
Alignment:
Q  438 ggatcttgcatatattatgcattgtctttactaagagagctaagctcac 486  Q
    |||||||||||||||||| ||||||| |||| ||  |||||||||||||    
T  18341 ggatcttgcatatattatacattgtccttaccaactgagctaagctcac 18293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 437 - 489
Target Start/End: Complemental strand, 75374 - 75322
Alignment:
Q  437 cggatcttgcatatattatgcattgtctttactaagagagctaagctcacaag 489  Q
    |||| |||||||||||||||||||||| |||| ||  ||||| ||||||||||    
T  75374 cggaccttgcatatattatgcattgtccttaccaactgagcttagctcacaag 75322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 491
Target Start/End: Complemental strand, 64273 - 64213
Alignment:
Q  431 gaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||| |||| ||||||||||||||||||||||  ||| |   ||||||||||||||||||    
T  64273 gaatcccggaccttgcatatattatgcattgtccataccagttgagctaagctcacaagga 64213  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 185322 - 185258
Alignment:
Q  427 gtttgaatctcggatcttgcatatattatgcattgtctttactaagagagctaagctcacaagga 491  Q
    ||||||| | |||||||||||||| ||||||||||||  ||| ||  ||||||||||||| ||||    
T  185322 gtttgaaccccggatcttgcatattttatgcattgtccataccaactgagctaagctcacgagga 185258  T

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