View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7226_low_8 (Length: 382)
Name: NF7226_low_8
Description: NF7226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7226_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 345
Target Start/End: Original strand, 36615380 - 36615725
Alignment:
| Q |
1 |
tcattttgcttcagtgttttcttcttctgattaattgaaagatttgttgaagatatgttgagagccaccacttaattgttttcatagttctccgaataaa |
100 |
Q |
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| T |
36615380 |
tcattttgcttcagtgttttcttcttctgattaattgaaagatttgttgaagatatgttgagagccaccacttaattgttttcatagttctccgaataaa |
36615479 |
T |
|
| Q |
101 |
catttcaaaacaacataaataaagttgtatcttttatcattctccttggtgaaagaaagaataaaagttttctcaagttatttaaaacttgaagatttgg |
200 |
Q |
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|||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36615480 |
catttcaaaagaacataaataaagttgcatcttttatctttctccttagtgaaagaaagaataaaagttttctcaagttatttaaaacttgaagatttgg |
36615579 |
T |
|
| Q |
201 |
ttggtggcctgaaaagc-gagataaggataatgtgttaccgtaaaatatggcattttttattaggtggggatggctatgtggaatggaatgaattagttg |
299 |
Q |
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||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36615580 |
ttggtggcctgaaaagctgagataaggataatgtgctaccgtaaaatatggcattttttattaggtggggatggctatgtggaatggaatgaattagttg |
36615679 |
T |
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| Q |
300 |
gtgccatacaagtctattatatctatctaaacacaatttgcttcta |
345 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36615680 |
gtgccatacaagtctattatatctatctaaacacaatttgcttcta |
36615725 |
T |
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