View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7227_high_8 (Length: 219)
Name: NF7227_high_8
Description: NF7227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7227_high_8 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 34586755 - 34586537
Alignment:
| Q |
1 |
gacacttcgtaaatgatacatcaaaatatgccacaaaagcatgaataaaatcgtcacgagcagcaacaagcttaaaaggtgctgtgaatgaacagtctcc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
34586755 |
gacacttcgtaaatgatacatcaaaatatgccacaaaagcatgaataaaatcgtcacgagcagcaacgagcttaaaaggtgctgtgaatgaacagtctcc |
34586656 |
T |
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| Q |
101 |
tgaagacatttttgagatgtccatggactttacaaagatgaacaagtcagcacaaatacaaatcttgcgattccaacaagaaactactgccttaaatgaa |
200 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| |
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| T |
34586655 |
tgaagacatttttgagatgtccatggactgaacaaagatgaacaagtcagcacaaatacaaatcttgtgattccaacaagaaactattgcctcaaatgaa |
34586556 |
T |
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| Q |
201 |
aagaaaaattcatcgctgt |
219 |
Q |
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||||||||||||||||||| |
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| T |
34586555 |
aagaaaaattcatcgctgt |
34586537 |
T |
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