View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7229_low_22 (Length: 332)
Name: NF7229_low_22
Description: NF7229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7229_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 47286162 - 47285845
Alignment:
| Q |
1 |
ccagcacttaaaacatgtggatttctcaaagtaacggattcgaatcctagttggattattgagaatatgccaatggcaagagtaatgggagacatgttaa |
100 |
Q |
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| T |
47286162 |
ccagcacttaaaacatgtggatttctcaaagtaacggattcgaatcctagttggattattgagaatatgccaatggcaagagtaatgggagacatgttaa |
47286063 |
T |
|
| Q |
101 |
ttctacctaacggcgatgttattataattaacggcgctggatcaggtacagctggatgggaaaacggatgtcaacctgttttaacaccggtaattttcag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |
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| T |
47286062 |
ttctacctaacggcgatgttattataattaacggcgctggatcaggtacagctggatgggaaaacggacgtcaacctgttttaacaccggtaattttccg |
47285963 |
T |
|
| Q |
201 |
ttcatcagaaaccaaatcagataaacggtttagtgtaatgtcaccggcttctagacctagactctaccattcatctgcaattgtgttaagagatggaaga |
300 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47285962 |
ttcatcagaaaccaaatcagataaacgatttagtgtaatgtcaccagcttctagacctagactctaccattcatctgcaattgtgttaagagatggaaga |
47285863 |
T |
|
| Q |
301 |
gttttagtaggtggtagt |
318 |
Q |
| |
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|||||||||||||||||| |
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| T |
47285862 |
gttttagtaggtggtagt |
47285845 |
T |
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