View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7229_low_39 (Length: 209)

Name: NF7229_low_39
Description: NF7229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7229_low_39
NF7229_low_39
[»] chr4 (8 HSPs)
chr4 (15-194)||(34929646-34929829)
chr4 (154-190)||(29592775-29592811)
chr4 (149-194)||(23327801-23327846)
chr4 (154-190)||(2786839-2786875)
chr4 (154-194)||(21202614-21202654)
chr4 (154-190)||(21579900-21579936)
chr4 (154-190)||(38486428-38486464)
chr4 (154-190)||(43640973-43641009)
[»] chr2 (6 HSPs)
chr2 (154-190)||(12672635-12672671)
chr2 (151-190)||(40692173-40692212)
chr2 (149-190)||(5279017-5279058)
chr2 (154-190)||(32497786-32497822)
chr2 (154-190)||(33889129-33889165)
chr2 (154-190)||(37004052-37004088)
[»] scaffold0054 (1 HSPs)
scaffold0054 (149-190)||(23443-23484)
[»] chr1 (10 HSPs)
chr1 (155-196)||(8838820-8838861)
chr1 (150-190)||(25343446-25343486)
chr1 (150-194)||(46154776-46154820)
chr1 (148-190)||(41972786-41972828)
chr1 (149-194)||(3415108-3415153)
chr1 (145-190)||(39281766-39281811)
chr1 (154-190)||(1351692-1351728)
chr1 (154-190)||(7183798-7183834)
chr1 (154-190)||(16476412-16476448)
chr1 (154-190)||(34663822-34663858)
[»] chr6 (8 HSPs)
chr6 (149-185)||(10959867-10959903)
chr6 (156-185)||(23636097-23636126)
chr6 (149-190)||(32410074-32410115)
chr6 (158-190)||(4494320-4494352)
chr6 (149-185)||(11381959-11381995)
chr6 (154-190)||(28502330-28502366)
chr6 (154-190)||(29814736-29814772)
chr6 (154-194)||(34684203-34684243)
[»] chr8 (10 HSPs)
chr8 (149-180)||(3251864-3251895)
chr8 (156-194)||(17805563-17805601)
chr8 (153-194)||(34101378-34101419)
chr8 (154-194)||(8673249-8673289)
chr8 (154-194)||(25478119-25478159)
chr8 (154-194)||(31513777-31513817)
chr8 (154-190)||(31731935-31731971)
chr8 (153-189)||(35286870-35286906)
chr8 (154-190)||(41709648-41709684)
chr8 (154-190)||(45446326-45446362)
[»] chr3 (4 HSPs)
chr3 (151-194)||(43175438-43175481)
chr3 (153-190)||(34026553-34026590)
chr3 (154-190)||(20609810-20609846)
chr3 (154-190)||(53557972-53558008)
[»] chr7 (7 HSPs)
chr7 (149-190)||(10932741-10932782)
chr7 (157-194)||(21784749-21784786)
chr7 (154-183)||(48894593-48894622)
chr7 (154-190)||(16962987-16963023)
chr7 (154-190)||(36769753-36769789)
chr7 (154-190)||(40753045-40753081)
chr7 (154-190)||(43189427-43189463)
[»] scaffold0050 (1 HSPs)
scaffold0050 (154-190)||(43137-43173)
[»] chr5 (3 HSPs)
chr5 (154-190)||(7725997-7726033)
chr5 (150-190)||(8136706-8136746)
chr5 (154-190)||(24181798-24181834)


Alignment Details
Target: chr4 (Bit Score: 120; Significance: 1e-61; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 34929646 - 34929829
Alignment:
Q  15 cagagacatctaatttatttgtttaatctctccatccctataaataagta----tactttaattactttctttnnnnnnnnntcggtagtttacttaatg 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||         ||||||||||||||||||    
T  34929646 cagagacatttaatttatttgtttaatctctccatccctataaataagtacgtatactttaattactttctttaaaaaaaaatcggtagtttacttaatg 34929745  T
Q  111 tatctattttatgcagtattaatgtacctaaaatactgtttatgggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  34929746 tatctattttatgtagtattaatgtacctaaaatagtgtttatgggtatgtttggtttgcaaaacagtaaaaactagacaaaac 34929829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 29592775 - 29592811
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||||||||||||||||||||||||||||||| ||||    
T  29592775 gggtgtgtttggtttgcaaaacagtaaatactggaca 29592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 23327801 - 23327846
Alignment:
Q  149 tttatgggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    |||| ||||||||||||||||||||||||||| |||  ||||||||    
T  23327801 tttaagggtgtgtttggtttgcaaaacagtaagtaccggacaaaac 23327846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 2786839 - 2786875
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  2786839 gggtgtgtttggtttgcaaaacagtaagtactggaca 2786875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 21202614 - 21202654
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    ||||||||||||||||||||| ||||| |||| ||||||||    
T  21202614 gggtgtgtttggtttgcaaaatagtaagtactggacaaaac 21202654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 21579900 - 21579936
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  21579900 gggtgtgtttggtttgcaaaacagtaagtactggaca 21579936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 38486464 - 38486428
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||||||||| |||||||||||||||| |||||||||    
T  38486464 gggtgtgtttcgtttgcaaaacagtaagtactagaca 38486428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 43640973 - 43641009
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||||||||||||||||||||||| || |||||||||    
T  43640973 gggtgtgtttggtttgcaaaacagcaagtactagaca 43641009  T

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Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 12672671 - 12672635
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||||||||||||||||||||||||||||||||||||    
T  12672671 gggtgtgtttggtttgcaaaacagtaaatactagaca 12672635  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 40692173 - 40692212
Alignment:
Q  151 tatgggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  40692173 tatgggtgtgtttgatttgcaaaacagtaaatactagaca 40692212  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 5279058 - 5279017
Alignment:
Q  149 tttatgggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||| ||||||||||||||||||||||||||| |||| ||||    
T  5279058 tttaagggtgtgtttggtttgcaaaacagtaagtacttgaca 5279017  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 32497786 - 32497822
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  32497786 gggtgtgtttggtttgcaaaacagtaagtactggaca 32497822  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 33889129 - 33889165
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  33889129 gggtgtgtttggtttgcaaaacagtaagtactggaca 33889165  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 37004088 - 37004052
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||||||||||||||||||||||| || |||||||||    
T  37004088 gggtgtgtttggtttgcaaaacagcaagtactagaca 37004052  T

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Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 23443 - 23484
Alignment:
Q  149 tttatgggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||||| ||||||| ||||    
T  23443 tttatgggtgtgtttggtttgcaaaacagcaaatactggaca 23484  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 8838820 - 8838861
Alignment:
Q  155 ggtgtgtttggtttgcaaaacagtaaatactagacaaaactg 196  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  8838820 ggtgcgtttggtttgcaaaacagtaaatactagacataactg 8838861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 25343486 - 25343446
Alignment:
Q  150 ttatgggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  25343486 ttatgagtgtgtttggtttgcaaaacagtaactactagaca 25343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 46154776 - 46154820
Alignment:
Q  150 ttatgggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    |||||||||||||| |||||||||||||||| |||| ||||||||    
T  46154776 ttatgggtgtgtttagtttgcaaaacagtaagtactggacaaaac 46154820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 41972786 - 41972828
Alignment:
Q  148 gtttatgggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||||||||||||||||||||||||||||| || |||| ||||    
T  41972786 gtttatgggtgtgtttggtttgcaaaacagcaagtactggaca 41972828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 3415153 - 3415108
Alignment:
Q  149 tttatgggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    |||||| |||||||||||||| |||||||||| |||| ||||||||    
T  3415153 tttatgagtgtgtttggtttgtaaaacagtaagtactggacaaaac 3415108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 39281766 - 39281811
Alignment:
Q  145 actgtttatgggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||| ||| ||||||||||||||||||||||||||| |||| ||||    
T  39281766 actgattaagggtgtgtttggtttgcaaaacagtaagtactggaca 39281811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 1351728 - 1351692
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  1351728 gggtgtgtttggtttgcaaaacagtaagtacttgaca 1351692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 7183798 - 7183834
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  7183798 gggtgtgtttggtttgcaaaacagtaagtactggaca 7183834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 16476448 - 16476412
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  16476448 gggtgtgtttggtttgcaaaacagtaagtactggaca 16476412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 34663822 - 34663858
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  34663822 gggtgtgtttggtttgcaaaacagtaagtactggaca 34663858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 10959867 - 10959903
Alignment:
Q  149 tttatgggtgtgtttggtttgcaaaacagtaaatact 185  Q
    |||||||||||||||||||||||||||||||| ||||    
T  10959867 tttatgggtgtgtttggtttgcaaaacagtaagtact 10959903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 23636097 - 23636126
Alignment:
Q  156 gtgtgtttggtttgcaaaacagtaaatact 185  Q
    ||||||||||||||||||||||||||||||    
T  23636097 gtgtgtttggtttgcaaaacagtaaatact 23636126  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 32410115 - 32410074
Alignment:
Q  149 tttatgggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  32410115 tttaggggtgtctttgatttgcaaaacagtaaatactagaca 32410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 4494352 - 4494320
Alignment:
Q  158 gtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||| |||||||||    
T  4494352 gtgtttggtttgcaaaacagtaagtactagaca 4494320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 11381959 - 11381995
Alignment:
Q  149 tttatgggtgtgtttggtttgcaaaacagtaaatact 185  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  11381959 tttatgggtgtgtttggtttgcaaaatagtaagtact 11381995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 28502330 - 28502366
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  28502330 gggtgtgtttggtttgcaaaacagtaagtactggaca 28502366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 29814736 - 29814772
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  29814736 gggtgtgtttggtttgcaaaacagtaagtactggaca 29814772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 34684243 - 34684203
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    ||||||||||||||||||||||||||| || | ||||||||    
T  34684243 gggtgtgtttggtttgcaaaacagtaagtattggacaaaac 34684203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000004; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 3251895 - 3251864
Alignment:
Q  149 tttatgggtgtgtttggtttgcaaaacagtaa 180  Q
    ||||||||||||||||||||||||||||||||    
T  3251895 tttatgggtgtgtttggtttgcaaaacagtaa 3251864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 17805563 - 17805601
Alignment:
Q  156 gtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  17805563 gtgtgtttggtttgcaaaacagtaagtacttgacaaaac 17805601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 34101378 - 34101419
Alignment:
Q  153 tgggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    |||||||||||||||||||||| ||||| |||| ||||||||    
T  34101378 tgggtgtgtttggtttgcaaaaaagtaagtactggacaaaac 34101419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 8673289 - 8673249
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    |||||||||||||||||||||||| || |||| ||||||||    
T  8673289 gggtgtgtttggtttgcaaaacagcaagtactggacaaaac 8673249  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 25478119 - 25478159
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    |||||||||||||||| |||||||||| |||| ||||||||    
T  25478119 gggtgtgtttggtttgtaaaacagtaagtacttgacaaaac 25478159  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 31513817 - 31513777
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    ||||||||||||||||||||||||||| || | ||||||||    
T  31513817 gggtgtgtttggtttgcaaaacagtaagtattggacaaaac 31513777  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 31731935 - 31731971
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  31731935 gggtgtgtttggtttgcaaaacagtaagtactggaca 31731971  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 35286906 - 35286870
Alignment:
Q  153 tgggtgtgtttggtttgcaaaacagtaaatactagac 189  Q
    |||||||||||| || |||||||||||||||||||||    
T  35286906 tgggtgtgtttgattcgcaaaacagtaaatactagac 35286870  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 41709648 - 41709684
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  41709648 gggtgtgtttggtttgcaaaacagtaagtactggaca 41709684  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 45446326 - 45446362
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  45446326 gggtgtgtttggtttgcaaaacagtaagtactggaca 45446362  T

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Target: chr3 (Bit Score: 32; Significance: 0.000000004; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 43175438 - 43175481
Alignment:
Q  151 tatgggtgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    ||||||||||||||||||||||||||| || |||| ||||||||    
T  43175438 tatgggtgtgtttggtttgcaaaacagcaagtactggacaaaac 43175481  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 34026553 - 34026590
Alignment:
Q  153 tgggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  34026553 tgggtgtgtttggtttgcaaaacagtaagtactggaca 34026590  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 20609846 - 20609810
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  20609846 gggtgtgtttggtttgcaaaacagtaagtactggaca 20609810  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 53558008 - 53557972
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  53558008 gggtgtgtttggtttgcaaaacagtaagtacttgaca 53557972  T

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Target: chr7 (Bit Score: 30; Significance: 0.00000007; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 10932782 - 10932741
Alignment:
Q  149 tttatgggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||| ||||||||||||||||||||||||||| |||| ||||    
T  10932782 tttaagggtgtgtttggtttgcaaaacagtaagtactggaca 10932741  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 21784749 - 21784786
Alignment:
Q  157 tgtgtttggtttgcaaaacagtaaatactagacaaaac 194  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  21784749 tgtgtttggtttgcaaaacagtaagtactggacaaaac 21784786  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 48894593 - 48894622
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaata 183  Q
    ||||||||||||||||||||||||||||||    
T  48894593 gggtgtgtttggtttgcaaaacagtaaata 48894622  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 16962987 - 16963023
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  16962987 gggtgtgtttggtttgcaaaacagtaagtactggaca 16963023  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 36769789 - 36769753
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  36769789 gggtgtgtttggtttgcaaaacagtaagtactggaca 36769753  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 40753045 - 40753081
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  40753045 gggtgtgtttggtttgcaaaacagtaagtactggaca 40753081  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 43189463 - 43189427
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  43189463 gggtgtgtttggtttgcaaaacagtaagtactggaca 43189427  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 43173 - 43137
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  43173 gggtgcgtttggtttgcaaaacagtaagtactagaca 43137  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000003; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 7726033 - 7725997
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  7726033 gggtgtgtttgatttgcaaaacagtaagtactagaca 7725997  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 8136706 - 8136746
Alignment:
Q  150 ttatgggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    |||||||||||||||||||| |||||||||| |||| ||||    
T  8136706 ttatgggtgtgtttggtttgtaaaacagtaagtactggaca 8136746  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 24181834 - 24181798
Alignment:
Q  154 gggtgtgtttggtttgcaaaacagtaaatactagaca 190  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  24181834 gggtgtgtttggtttgcaaaacagtaagtactggaca 24181798  T

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