View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7230_low_6 (Length: 280)

Name: NF7230_low_6
Description: NF7230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7230_low_6
NF7230_low_6
[»] chr7 (84 HSPs)
chr7 (122-280)||(41522594-41522752)
chr7 (122-280)||(41525056-41525214)
chr7 (122-280)||(32125168-32125326)
chr7 (122-280)||(26356286-26356443)
chr7 (122-280)||(26358738-26358895)
chr7 (122-280)||(16409737-16409894)
chr7 (122-280)||(11972165-11972331)
chr7 (122-280)||(21189922-21190088)
chr7 (122-280)||(455999-456156)
chr7 (122-280)||(15377040-15377206)
chr7 (122-280)||(16232189-16232355)
chr7 (122-280)||(14949449-14949614)
chr7 (122-280)||(20385450-20385615)
chr7 (122-280)||(24701924-24702073)
chr7 (122-280)||(24704374-24704523)
chr7 (122-245)||(11393637-11393760)
chr7 (124-280)||(27216546-27216695)
chr7 (162-280)||(18639988-18640107)
chr7 (180-266)||(18423425-18423511)
chr7 (1-47)||(455878-455924)
chr7 (1-47)||(11393835-11393881)
chr7 (1-47)||(11972044-11972090)
chr7 (1-47)||(14949689-14949735)
chr7 (1-47)||(15377281-15377327)
chr7 (1-47)||(16232068-16232114)
chr7 (1-47)||(16409616-16409662)
chr7 (1-47)||(20385690-20385736)
chr7 (1-47)||(21190163-21190209)
chr7 (1-47)||(24701803-24701849)
chr7 (1-47)||(24704253-24704299)
chr7 (1-47)||(26356518-26356564)
chr7 (1-47)||(26358970-26359016)
chr7 (1-47)||(27216423-27216469)
chr7 (1-47)||(32125047-32125093)
chr7 (1-47)||(41522485-41522531)
chr7 (1-47)||(41524947-41524993)
chr7 (198-242)||(10064143-10064187)
chr7 (221-280)||(1543493-1543554)
chr7 (244-280)||(20110398-20110434)
chr7 (244-280)||(29329204-29329240)
chr7 (244-280)||(44116351-44116387)
chr7 (244-280)||(48273190-48273226)
chr7 (244-279)||(20110354-20110389)
chr7 (245-280)||(32300921-32300956)
chr7 (245-280)||(38227304-38227339)
chr7 (198-244)||(42461692-42461739)
chr7 (198-243)||(38519115-38519161)
chr7 (244-280)||(11393570-11393606)
chr7 (244-280)||(11972339-11972375)
chr7 (244-280)||(14949405-14949441)
chr7 (244-280)||(15376996-15377032)
chr7 (244-280)||(16409902-16409938)
chr7 (200-243)||(16995967-16996011)
chr7 (244-280)||(17062160-17062196)
chr7 (244-280)||(18427375-18427411)
chr7 (244-280)||(18456652-18456688)
chr7 (244-280)||(20385406-20385442)
chr7 (244-280)||(21189878-21189914)
chr7 (244-280)||(24702081-24702117)
chr7 (244-280)||(24704531-24704567)
chr7 (244-280)||(27216703-27216739)
chr7 (244-280)||(32125334-32125370)
chr7 (244-280)||(41522760-41522796)
chr7 (244-280)||(41525222-41525258)
chr7 (245-280)||(8852262-8852297)
chr7 (201-243)||(9033642-9033685)
chr7 (245-280)||(11066388-11066423)
chr7 (245-280)||(12371264-12371299)
chr7 (245-280)||(13150675-13150710)
chr7 (245-280)||(14183657-14183692)
chr7 (245-280)||(18075582-18075617)
chr7 (245-280)||(20619205-20619240)
chr7 (198-243)||(131148-131193)
chr7 (245-279)||(11066346-11066380)
chr7 (198-243)||(11525896-11525941)
chr7 (198-243)||(17017749-17017795)
chr7 (244-280)||(456164-456200)
chr7 (198-241)||(9390184-9390228)
chr7 (244-280)||(15082165-15082200)
chr7 (244-280)||(16232363-16232399)
chr7 (244-280)||(26356242-26356278)
chr7 (244-280)||(26358694-26358730)
chr7 (244-280)||(29329160-29329196)
chr7 (244-280)||(48273234-48273270)
[»] chr2 (75 HSPs)
chr2 (122-280)||(571074-571232)
chr2 (122-280)||(18808612-18808778)
chr2 (122-280)||(32039825-32039983)
chr2 (122-280)||(23709859-23710025)
chr2 (122-280)||(24905960-24906125)
chr2 (122-280)||(24908435-24908600)
chr2 (124-280)||(26507529-26507692)
chr2 (122-280)||(24901006-24901171)
chr2 (122-280)||(24903483-24903648)
chr2 (127-280)||(23135265-23135425)
chr2 (122-280)||(39681983-39682148)
chr2 (124-280)||(26505051-26505214)
chr2 (122-242)||(34402872-34402992)
chr2 (122-280)||(24898523-24898696)
chr2 (154-276)||(45030185-45030308)
chr2 (198-280)||(28576852-28576934)
chr2 (122-242)||(23130547-23130674)
chr2 (122-242)||(23133014-23133141)
chr2 (122-243)||(24529917-24530022)
chr2 (1-47)||(18808491-18808537)
chr2 (1-47)||(23135140-23135186)
chr2 (1-47)||(23710100-23710146)
chr2 (1-47)||(24898771-24898817)
chr2 (1-47)||(24901246-24901292)
chr2 (1-47)||(24903723-24903769)
chr2 (1-47)||(24906200-24906246)
chr2 (1-47)||(24908675-24908721)
chr2 (1-47)||(26504928-26504974)
chr2 (1-47)||(26507406-26507452)
chr2 (1-47)||(32040058-32040104)
chr2 (1-47)||(34403067-34403113)
chr2 (1-47)||(39681862-39681908)
chr2 (1-47)||(570953-570999)
chr2 (1-47)||(23130426-23130472)
chr2 (1-47)||(23132893-23132939)
chr2 (244-280)||(21155386-21155422)
chr2 (244-280)||(23712339-23712375)
chr2 (244-280)||(24529857-24529893)
chr2 (198-243)||(18547277-18547323)
chr2 (198-243)||(34136683-34136729)
chr2 (198-243)||(43947659-43947705)
chr2 (245-278)||(6576156-6576189)
chr2 (244-280)||(571240-571276)
chr2 (244-280)||(6725795-6725831)
chr2 (244-280)||(18808786-18808822)
chr2 (244-280)||(23135433-23135469)
chr2 (244-280)||(23709815-23709851)
chr2 (244-280)||(23712296-23712332)
chr2 (244-280)||(24898479-24898515)
chr2 (244-280)||(24900962-24900998)
chr2 (244-280)||(24903439-24903475)
chr2 (244-280)||(24905916-24905952)
chr2 (244-280)||(24908391-24908427)
chr2 (244-280)||(26505222-26505258)
chr2 (244-280)||(26507700-26507736)
chr2 (244-280)||(28576942-28576978)
chr2 (244-280)||(32039781-32039817)
chr2 (245-280)||(5032461-5032496)
chr2 (245-280)||(9974845-9974880)
chr2 (245-280)||(19202301-19202336)
chr2 (245-280)||(24435973-24436008)
chr2 (245-280)||(24781960-24781995)
chr2 (244-277)||(24643237-24643270)
chr2 (251-280)||(24643277-24643306)
chr2 (199-243)||(39828288-39828333)
chr2 (244-280)||(6725838-6725874)
chr2 (248-280)||(19202236-19202268)
chr2 (244-280)||(21155343-21155379)
chr2 (248-280)||(22500805-22500837)
chr2 (248-280)||(22508739-22508771)
chr2 (244-280)||(24367617-24367652)
chr2 (248-280)||(24865751-24865783)
chr2 (248-280)||(24865858-24865890)
chr2 (244-280)||(39682156-39682192)
chr2 (244-280)||(45030137-45030173)
[»] chr1 (43 HSPs)
chr1 (122-280)||(23594062-23594220)
chr1 (122-280)||(21475414-21475572)
chr1 (122-280)||(13988579-13988745)
chr1 (122-280)||(21923618-21923784)
chr1 (122-246)||(41372783-41372907)
chr1 (1-47)||(13988458-13988504)
chr1 (1-47)||(21475647-21475693)
chr1 (1-47)||(21923859-21923905)
chr1 (1-47)||(23594295-23594341)
chr1 (1-47)||(41372662-41372708)
chr1 (244-280)||(21711589-21711625)
chr1 (244-280)||(22123351-22123387)
chr1 (244-280)||(22123394-22123430)
chr1 (244-280)||(27161746-27161782)
chr1 (244-280)||(40389037-40389073)
chr1 (245-280)||(431559-431594)
chr1 (245-280)||(23967569-23967604)
chr1 (198-243)||(20316158-20316204)
chr1 (198-243)||(21043613-21043659)
chr1 (198-243)||(22118556-22118602)
chr1 (198-243)||(48520036-48520082)
chr1 (198-242)||(23967499-23967544)
chr1 (247-280)||(40388996-40389029)
chr1 (244-280)||(21923574-21923610)
chr1 (244-280)||(23594018-23594054)
chr1 (244-280)||(29297937-29297973)
chr1 (244-280)||(31612111-31612147)
chr1 (244-280)||(31612155-31612191)
chr1 (245-280)||(20316228-20316263)
chr1 (245-280)||(35088395-35088430)
chr1 (245-279)||(20587650-20587684)
chr1 (245-279)||(20592188-20592222)
chr1 (198-243)||(47190382-47190427)
chr1 (198-243)||(52954649-52954694)
chr1 (200-243)||(20957935-20957979)
chr1 (244-280)||(21475370-21475406)
chr1 (248-280)||(21707007-21707039)
chr1 (244-280)||(21707047-21707083)
chr1 (248-280)||(21711549-21711581)
chr1 (248-280)||(27161789-27161821)
chr1 (244-280)||(29297980-29298016)
chr1 (244-280)||(35088436-35088472)
chr1 (198-241)||(35982167-35982211)
[»] chr5 (56 HSPs)
chr5 (122-280)||(10733267-10733424)
chr5 (122-280)||(29348131-29348288)
chr5 (122-280)||(29350604-29350761)
chr5 (122-280)||(42245692-42245849)
chr5 (125-280)||(265095-265258)
chr5 (122-280)||(20908681-20908847)
chr5 (122-280)||(29345650-29345815)
chr5 (122-242)||(39363084-39363196)
chr5 (122-245)||(31143957-31144074)
chr5 (198-276)||(39244889-39244967)
chr5 (122-243)||(2155000-2155105)
chr5 (1-47)||(265329-265375)
chr5 (1-47)||(10733499-10733545)
chr5 (1-47)||(20908560-20908606)
chr5 (1-47)||(29345529-29345575)
chr5 (1-47)||(29348010-29348056)
chr5 (1-47)||(29350483-29350529)
chr5 (1-47)||(31143836-31143882)
chr5 (1-47)||(42245924-42245970)
chr5 (1-47)||(39362963-39363009)
chr5 (244-280)||(11581527-11581563)
chr5 (244-280)||(14047921-14047957)
chr5 (244-280)||(14047965-14048001)
chr5 (244-280)||(20918273-20918309)
chr5 (244-280)||(22411986-22412022)
chr5 (244-280)||(36155026-36155062)
chr5 (198-243)||(26733120-26733166)
chr5 (247-280)||(24066993-24067026)
chr5 (244-280)||(265051-265087)
chr5 (244-280)||(2154897-2154933)
chr5 (244-280)||(2154940-2154976)
chr5 (244-280)||(11581483-11581519)
chr5 (244-280)||(20908855-20908891)
chr5 (248-280)||(22412033-22412065)
chr5 (244-280)||(29329734-29329770)
chr5 (244-280)||(29345823-29345859)
chr5 (244-280)||(29348296-29348332)
chr5 (244-280)||(29350769-29350805)
chr5 (244-280)||(42245648-42245684)
chr5 (245-280)||(21309063-21309098)
chr5 (204-243)||(23202861-23202900)
chr5 (201-243)||(23469549-23469592)
chr5 (198-243)||(15796166-15796212)
chr5 (198-243)||(21732259-21732304)
chr5 (198-243)||(21809910-21809955)
chr5 (198-243)||(26740976-26741022)
chr5 (204-244)||(16227522-16227563)
chr5 (247-280)||(18319277-18319310)
chr5 (244-280)||(10775960-10775995)
chr5 (248-280)||(12122545-12122577)
chr5 (248-280)||(17874987-17875019)
chr5 (198-243)||(25743507-25743554)
chr5 (244-276)||(29329777-29329809)
chr5 (244-280)||(32027193-32027229)
chr5 (252-280)||(36155070-36155098)
chr5 (244-280)||(39244979-39245015)
[»] chr3 (78 HSPs)
chr3 (122-280)||(16454608-16454765)
chr3 (122-280)||(9707933-9708099)
chr3 (122-280)||(34158995-34159161)
chr3 (122-280)||(55500620-55500777)
chr3 (122-280)||(17462847-17463013)
chr3 (122-280)||(45607234-45607384)
chr3 (125-280)||(13152118-13152265)
chr3 (125-280)||(13154583-13154730)
chr3 (122-280)||(7781636-7781801)
chr3 (122-280)||(10248050-10248199)
chr3 (122-242)||(55476191-55476303)
chr3 (169-280)||(15977236-15977347)
chr3 (174-280)||(6469457-6469563)
chr3 (198-280)||(45578165-45578247)
chr3 (174-280)||(28848938-28849043)
chr3 (154-244)||(29172969-29173059)
chr3 (162-243)||(21618184-21618266)
chr3 (162-243)||(36166290-36166372)
chr3 (1-47)||(7781876-7781922)
chr3 (1-47)||(13152343-13152389)
chr3 (1-47)||(16454840-16454886)
chr3 (1-47)||(17462726-17462772)
chr3 (1-47)||(34158874-34158920)
chr3 (1-47)||(45607459-45607505)
chr3 (1-47)||(55476070-55476116)
chr3 (1-47)||(55500499-55500545)
chr3 (1-46)||(13154809-13154854)
chr3 (1-47)||(9708174-9708220)
chr3 (1-47)||(15555364-15555410)
chr3 (244-280)||(8898894-8898930)
chr3 (244-280)||(21618290-21618326)
chr3 (244-280)||(24153448-24153484)
chr3 (244-280)||(36166396-36166432)
chr3 (244-280)||(41123690-41123726)
chr3 (1-47)||(10248274-10248321)
chr3 (245-280)||(43890081-43890116)
chr3 (198-243)||(9577449-9577495)
chr3 (187-243)||(15206668-15206725)
chr3 (244-280)||(6469413-6469449)
chr3 (244-280)||(7781592-7781628)
chr3 (244-280)||(10248006-10248042)
chr3 (244-280)||(13152074-13152110)
chr3 (244-280)||(13154539-13154575)
chr3 (244-280)||(15977355-15977391)
chr3 (244-280)||(16283094-16283130)
chr3 (244-280)||(16283137-16283173)
chr3 (244-280)||(16454564-16454600)
chr3 (244-280)||(17446980-17447016)
chr3 (244-280)||(17463021-17463057)
chr3 (244-280)||(28848894-28848930)
chr3 (244-280)||(29172867-29172903)
chr3 (244-280)||(29172910-29172946)
chr3 (244-280)||(34159169-34159205)
chr3 (244-280)||(36166440-36166476)
chr3 (244-280)||(45578121-45578157)
chr3 (244-280)||(45607190-45607226)
chr3 (221-280)||(45796756-45796822)
chr3 (244-280)||(55500785-55500821)
chr3 (245-280)||(9707890-9707925)
chr3 (245-280)||(14497133-14497168)
chr3 (245-280)||(14507824-14507859)
chr3 (245-280)||(15932551-15932586)
chr3 (245-280)||(17538050-17538085)
chr3 (245-280)||(17548612-17548647)
chr3 (245-280)||(18700771-18700806)
chr3 (245-280)||(22307657-22307692)
chr3 (123-158)||(29173072-29173107)
chr3 (245-280)||(40806916-40806951)
chr3 (245-280)||(41173416-41173451)
chr3 (198-243)||(12377703-12377749)
chr3 (245-279)||(13031823-13031857)
chr3 (198-243)||(13919110-13919156)
chr3 (198-243)||(15245761-15245807)
chr3 (198-243)||(15264882-15264928)
chr3 (198-243)||(32404482-32404527)
chr3 (244-280)||(8898937-8898973)
chr3 (244-280)||(17446937-17446973)
chr3 (244-280)||(38962175-38962210)
[»] scaffold0230 (3 HSPs)
scaffold0230 (122-280)||(13624-13782)
scaffold0230 (1-47)||(13503-13549)
scaffold0230 (244-280)||(13790-13826)
[»] chr6 (56 HSPs)
chr6 (122-280)||(1541238-1541395)
chr6 (122-280)||(12741995-12742152)
chr6 (122-280)||(2291507-2291673)
chr6 (122-280)||(8054698-8054864)
chr6 (122-280)||(18334919-18335085)
chr6 (122-280)||(19004715-19004881)
chr6 (122-280)||(24422216-24422382)
chr6 (122-280)||(33863947-33864113)
chr6 (122-280)||(22781941-22782106)
chr6 (122-280)||(33861464-33861629)
chr6 (122-280)||(26924967-26925132)
chr6 (122-243)||(25591120-25591249)
chr6 (122-243)||(25688245-25688358)
chr6 (149-280)||(19859246-19859378)
chr6 (122-178)||(25656472-25656528)
chr6 (180-243)||(25714170-25714233)
chr6 (198-243)||(25656524-25656569)
chr6 (122-178)||(25714136-25714192)
chr6 (1-47)||(2291748-2291794)
chr6 (1-47)||(8054577-8054623)
chr6 (1-47)||(12741874-12741920)
chr6 (1-47)||(18335160-18335206)
chr6 (1-47)||(19004594-19004640)
chr6 (1-47)||(22781820-22781866)
chr6 (1-47)||(24422095-24422141)
chr6 (1-47)||(26925207-26925253)
chr6 (1-47)||(33861343-33861389)
chr6 (1-47)||(33863826-33863872)
chr6 (244-280)||(20557176-20557212)
chr6 (244-280)||(25688382-25688418)
chr6 (244-280)||(25714300-25714336)
chr6 (1-47)||(1541470-1541517)
chr6 (244-279)||(20557220-20557255)
chr6 (198-243)||(17229985-17230031)
chr6 (198-243)||(17742939-17742985)
chr6 (244-280)||(1595349-1595385)
chr6 (244-280)||(1595392-1595428)
chr6 (244-280)||(12742160-12742196)
chr6 (244-280)||(16448770-16448806)
chr6 (244-280)||(18334875-18334911)
chr6 (244-280)||(19004889-19004925)
chr6 (244-280)||(19859202-19859238)
chr6 (198-241)||(20136415-20136459)
chr6 (198-241)||(22196410-22196454)
chr6 (244-280)||(24422390-24422426)
chr6 (244-280)||(26924923-26924959)
chr6 (244-280)||(33861637-33861673)
chr6 (244-280)||(33864121-33864157)
chr6 (198-243)||(16492893-16492938)
chr6 (198-243)||(18896640-18896685)
chr6 (198-243)||(35007894-35007939)
chr6 (247-280)||(16448814-16448847)
chr6 (244-280)||(1541194-1541230)
chr6 (244-280)||(8054872-8054908)
chr6 (198-243)||(18178001-18178048)
chr6 (244-280)||(25714257-25714293)
[»] chr4 (49 HSPs)
chr4 (122-280)||(1837836-1837996)
chr4 (122-280)||(18239746-18239912)
chr4 (122-280)||(50222666-50222832)
chr4 (122-280)||(14718293-14718459)
chr4 (122-280)||(15118679-15118845)
chr4 (122-246)||(12033500-12033624)
chr4 (122-280)||(44614957-44615123)
chr4 (122-280)||(3514715-3514866)
chr4 (162-280)||(44773414-44773533)
chr4 (180-280)||(7641509-7641609)
chr4 (122-215)||(29267332-29267433)
chr4 (154-244)||(15355668-15355759)
chr4 (1-47)||(1838071-1838117)
chr4 (1-47)||(12033699-12033745)
chr4 (1-47)||(14739617-14739663)
chr4 (1-47)||(15118920-15118966)
chr4 (1-47)||(29267211-29267257)
chr4 (1-47)||(44614836-44614882)
chr4 (1-47)||(50222907-50222953)
chr4 (1-47)||(18239987-18240033)
chr4 (244-280)||(14280196-14280232)
chr4 (244-280)||(15355609-15355645)
chr4 (244-280)||(20149712-20149748)
chr4 (198-243)||(15791428-15791474)
chr4 (198-243)||(26045625-26045671)
chr4 (198-243)||(26050806-26050852)
chr4 (247-280)||(14280155-14280188)
chr4 (244-280)||(1837792-1837828)
chr4 (244-280)||(7641465-7641501)
chr4 (244-280)||(8575150-8575186)
chr4 (244-280)||(15118635-15118671)
chr4 (244-280)||(18215558-18215594)
chr4 (244-280)||(18239702-18239738)
chr4 (244-280)||(29267463-29267499)
chr4 (221-280)||(32850970-32851036)
chr4 (244-280)||(44102094-44102130)
chr4 (244-280)||(44615131-44615167)
chr4 (244-280)||(50222622-50222658)
chr4 (244-280)||(52312310-52312346)
chr4 (244-280)||(52312353-52312389)
chr4 (244-280)||(54798994-54799030)
chr4 (244-280)||(54799038-54799074)
chr4 (8-47)||(38106974-38107013)
chr4 (244-278)||(12554-12588)
chr4 (221-280)||(15869177-15869238)
chr4 (247-280)||(20149671-20149704)
chr4 (198-241)||(15098938-15098982)
chr4 (244-280)||(18215602-18215637)
chr4 (198-241)||(19736381-19736425)
[»] scaffold0254 (3 HSPs)
scaffold0254 (122-280)||(20416-20582)
scaffold0254 (1-47)||(20295-20341)
scaffold0254 (244-280)||(20590-20626)
[»] scaffold0023 (5 HSPs)
scaffold0023 (122-280)||(94080-94246)
scaffold0023 (1-47)||(93959-94005)
scaffold0023 (244-280)||(94254-94290)
scaffold0023 (244-279)||(44297-44332)
scaffold0023 (244-280)||(44254-44290)
[»] chr8 (50 HSPs)
chr8 (122-280)||(1484071-1484237)
chr8 (122-280)||(20402896-20403062)
chr8 (125-280)||(22001426-22001589)
chr8 (122-280)||(4542700-4542865)
chr8 (122-280)||(5853619-5853784)
chr8 (122-280)||(14823444-14823609)
chr8 (122-242)||(4482981-4483093)
chr8 (162-280)||(20046478-20046597)
chr8 (122-242)||(18678390-18678517)
chr8 (122-242)||(18717579-18717706)
chr8 (154-242)||(26225636-26225725)
chr8 (154-242)||(26219445-26219534)
chr8 (1-47)||(1483950-1483996)
chr8 (1-47)||(4482860-4482906)
chr8 (1-47)||(4542940-4542986)
chr8 (1-47)||(5853859-5853905)
chr8 (1-47)||(14823323-14823369)
chr8 (1-47)||(18678592-18678638)
chr8 (1-47)||(18717781-18717827)
chr8 (1-47)||(20402775-20402821)
chr8 (1-47)||(22001309-22001355)
chr8 (244-280)||(15203557-15203593)
chr8 (244-280)||(26225575-26225611)
chr8 (244-280)||(45291022-45291058)
chr8 (245-280)||(18833248-18833283)
chr8 (198-240)||(37515270-37515313)
chr8 (198-243)||(18833179-18833225)
chr8 (198-243)||(20502432-20502478)
chr8 (198-243)||(22253495-22253541)
chr8 (198-243)||(22963743-22963789)
chr8 (198-243)||(28397293-28397339)
chr8 (244-280)||(1484245-1484281)
chr8 (244-280)||(4542656-4542692)
chr8 (244-280)||(5853575-5853611)
chr8 (244-276)||(19896065-19896097)
chr8 (244-280)||(19896108-19896144)
chr8 (244-280)||(20403070-20403106)
chr8 (244-280)||(22001597-22001633)
chr8 (244-280)||(41598031-41598067)
chr8 (245-280)||(39937107-39937142)
chr8 (198-243)||(22382064-22382110)
chr8 (198-243)||(22525302-22525348)
chr8 (198-243)||(22984028-22984074)
chr8 (198-243)||(22995586-22995632)
chr8 (199-243)||(23667670-23667714)
chr8 (244-280)||(14823617-14823653)
chr8 (244-280)||(15203514-15203550)
chr8 (244-280)||(18833290-18833326)
chr8 (244-280)||(26219559-26219595)
chr8 (244-280)||(41597988-41598024)
[»] scaffold0444 (3 HSPs)
scaffold0444 (122-280)||(13061-13227)
scaffold0444 (1-47)||(12940-12986)
scaffold0444 (244-280)||(13235-13271)
[»] scaffold0145 (3 HSPs)
scaffold0145 (122-280)||(9418-9584)
scaffold0145 (1-47)||(9297-9343)
scaffold0145 (244-280)||(9591-9627)
[»] scaffold0044 (3 HSPs)
scaffold0044 (122-280)||(40070-40235)
scaffold0044 (1-47)||(39949-39995)
scaffold0044 (244-280)||(40243-40279)
[»] scaffold0028 (15 HSPs)
scaffold0028 (122-280)||(136350-136515)
scaffold0028 (122-280)||(138819-138984)
scaffold0028 (122-280)||(143757-143922)
scaffold0028 (122-280)||(133881-134046)
scaffold0028 (122-280)||(141288-141453)
scaffold0028 (1-47)||(133760-133806)
scaffold0028 (1-47)||(136229-136275)
scaffold0028 (1-47)||(138698-138744)
scaffold0028 (1-47)||(141167-141213)
scaffold0028 (1-47)||(143636-143682)
scaffold0028 (248-280)||(134058-134090)
scaffold0028 (244-280)||(136523-136559)
scaffold0028 (244-280)||(138992-139028)
scaffold0028 (244-280)||(141461-141497)
scaffold0028 (244-280)||(143930-143966)
[»] scaffold0134 (3 HSPs)
scaffold0134 (122-280)||(37491-37656)
scaffold0134 (1-47)||(37370-37416)
scaffold0134 (244-280)||(37664-37700)
[»] scaffold0003 (2 HSPs)
scaffold0003 (122-243)||(158795-158924)
scaffold0003 (244-280)||(158734-158770)
[»] scaffold0716 (1 HSPs)
scaffold0716 (122-280)||(4393-4553)
[»] scaffold0022 (3 HSPs)
scaffold0022 (162-243)||(116154-116236)
scaffold0022 (244-280)||(116265-116301)
scaffold0022 (244-278)||(116309-116343)
[»] scaffold0192 (1 HSPs)
scaffold0192 (221-280)||(9677-9738)
[»] scaffold0075 (2 HSPs)
scaffold0075 (221-276)||(8767-8824)
scaffold0075 (244-280)||(52250-52286)
[»] scaffold0142 (3 HSPs)
scaffold0142 (244-280)||(16664-16700)
scaffold0142 (244-277)||(16577-16610)
scaffold0142 (244-280)||(16620-16656)
[»] scaffold0106 (1 HSPs)
scaffold0106 (244-280)||(15478-15514)
[»] scaffold0013 (2 HSPs)
scaffold0013 (244-280)||(30137-30173)
scaffold0013 (244-280)||(30181-30217)
[»] scaffold0853 (1 HSPs)
scaffold0853 (198-243)||(2995-3041)
[»] scaffold0485 (1 HSPs)
scaffold0485 (198-243)||(9915-9961)
[»] scaffold0396 (1 HSPs)
scaffold0396 (198-243)||(1637-1683)
[»] scaffold0347 (1 HSPs)
scaffold0347 (198-243)||(8633-8679)
[»] scaffold0293 (1 HSPs)
scaffold0293 (198-243)||(17247-17293)
[»] scaffold0122 (2 HSPs)
scaffold0122 (244-278)||(44993-45027)
scaffold0122 (244-280)||(44947-44983)
[»] scaffold0040 (2 HSPs)
scaffold0040 (198-243)||(10882-10928)
scaffold0040 (198-243)||(103962-104006)
[»] scaffold0011 (1 HSPs)
scaffold0011 (198-243)||(38446-38492)
[»] scaffold0010 (2 HSPs)
scaffold0010 (198-243)||(6758-6804)
scaffold0010 (202-243)||(394-436)
[»] scaffold0001 (2 HSPs)
scaffold0001 (198-243)||(497206-497252)
scaffold0001 (245-278)||(76629-76662)
[»] scaffold0101 (1 HSPs)
scaffold0101 (247-280)||(1524-1557)
[»] scaffold0697 (2 HSPs)
scaffold0697 (248-280)||(6406-6438)
scaffold0697 (244-277)||(6445-6478)
[»] scaffold0235 (2 HSPs)
scaffold0235 (221-280)||(13151-13217)
scaffold0235 (221-280)||(24853-24919)
[»] scaffold0737 (2 HSPs)
scaffold0737 (245-280)||(6743-6778)
scaffold0737 (245-279)||(6786-6820)
[»] scaffold0375 (1 HSPs)
scaffold0375 (245-280)||(9399-9434)
[»] scaffold0371 (1 HSPs)
scaffold0371 (245-280)||(2803-2838)
[»] scaffold0282 (1 HSPs)
scaffold0282 (198-244)||(12002-12049)
[»] scaffold0111 (3 HSPs)
scaffold0111 (245-280)||(7234-7269)
scaffold0111 (245-280)||(14353-14388)
scaffold0111 (248-280)||(14421-14453)
[»] scaffold0064 (1 HSPs)
scaffold0064 (245-280)||(57720-57755)
[»] scaffold0061 (1 HSPs)
scaffold0061 (245-280)||(19516-19551)
[»] scaffold0058 (2 HSPs)
scaffold0058 (245-280)||(710-745)
scaffold0058 (198-243)||(769-816)
[»] scaffold0047 (1 HSPs)
scaffold0047 (245-280)||(78006-78041)
[»] scaffold0036 (1 HSPs)
scaffold0036 (245-280)||(78449-78484)
[»] scaffold0914 (1 HSPs)
scaffold0914 (198-243)||(1444-1490)
[»] scaffold0453 (1 HSPs)
scaffold0453 (198-243)||(2149-2195)
[»] scaffold0278 (1 HSPs)
scaffold0278 (198-243)||(10805-10850)
[»] scaffold0006 (1 HSPs)
scaffold0006 (198-243)||(106064-106110)
[»] scaffold0601 (1 HSPs)
scaffold0601 (245-274)||(7945-7974)
[»] scaffold0413 (1 HSPs)
scaffold0413 (198-243)||(12314-12358)
[»] scaffold0021 (1 HSPs)
scaffold0021 (198-243)||(136715-136759)
[»] scaffold1351 (2 HSPs)
scaffold1351 (248-280)||(1321-1353)
scaffold1351 (248-280)||(1362-1394)
[»] scaffold0819 (1 HSPs)
scaffold0819 (244-280)||(4052-4087)
[»] scaffold0394 (2 HSPs)
scaffold0394 (244-280)||(11863-11899)
scaffold0394 (244-280)||(11906-11942)
[»] scaffold0026 (1 HSPs)
scaffold0026 (248-280)||(145733-145765)


Alignment Details
Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 41522594 - 41522752
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41522594 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 41522693  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41522694 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 41522752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 41525056 - 41525214
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41525056 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 41525155  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41525156 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 41525214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 32125168 - 32125326
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32125168 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 32125267  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32125268 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 32125326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 26356443 - 26356286
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26356443 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 26356344  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26356343 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 26356286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 26358895 - 26358738
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26358895 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 26358796  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26358795 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 26358738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 16409737 - 16409894
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16409737 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactcgataacttgacaacttaacctcttgactatgcaacttaatcttct 16409836  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16409837 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 16409894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 11972165 - 11972331
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  11972165 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 11972264  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11972265 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 11972331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 21190088 - 21189922
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  21190088 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 21189989  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21189988 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 21189922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 455999 - 456156
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  455999 agaatcacagctttaaacaatttcatgatttaacaacttaacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 456098  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  456099 aatcatgcatgtggtaccaatctttgagcgtaaataggct-tcagggcatcaagccctc 456156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 15377206 - 15377040
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  15377206 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 15377107  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15377106 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccctc 15377040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 16232189 - 16232355
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  16232189 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 16232288  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16232289 aatcttctaatcatgcatgtggtaccaatctttaagcgtaaataggctcccagggcatcaagccctc 16232355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 14949614 - 14949449
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  14949614 agaatcatagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 14949515  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14949514 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 14949449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 20385615 - 20385450
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  20385615 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20385516  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  20385515 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccaaggcatcaagccctc 20385450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 24701924 - 24702073
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  24701924 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 24702015  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24702016 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 24702073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 24704374 - 24704523
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  24704374 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 24704465  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24704466 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 24704523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 122 - 245
Target Start/End: Complemental strand, 11393760 - 11393637
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11393760 agaatcatagctttaaacaatttcatgatttaacaacttaacaacttgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 11393661  T
Q  222 aatcatgcatgtggtaccaatctt 245  Q
    ||||||||||||||||||||||||    
T  11393660 aatcatgcatgtggtaccaatctt 11393637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 124 - 280
Target Start/End: Original strand, 27216546 - 27216695
Alignment:
Q  124 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctct--tgactatgcaacttaatcttct 221  Q
    |||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  27216546 aatcacagctttaaacaatttcatgatttaacaactt--------gacaacttgataacttgacaacttaacctctcttgactatgcaacttaatcttct 27216637  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27216638 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 27216695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 18639988 - 18640107
Alignment:
Q  162 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 260  Q
    |||||| ||||| ||||| |||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18639988 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 18640087  T
Q  261 tcccagggcatcaagccctc 280  Q
    |||||||||||||| |||||    
T  18640088 tcccagggcatcaaaccctc 18640107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 18423425 - 18423511
Alignment:
Q  180 aacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccag 266  Q
    |||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18423425 aactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccag 18423511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 455878 - 455924
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  455878 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 455924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11393881 - 11393835
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  11393881 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 11393835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11972044 - 11972090
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  11972044 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 11972090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14949735 - 14949689
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  14949735 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 14949689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15377327 - 15377281
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  15377327 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 15377281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16232068 - 16232114
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  16232068 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 16232114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16409616 - 16409662
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  16409616 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 16409662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20385736 - 20385690
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20385736 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 20385690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21190209 - 21190163
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  21190209 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 21190163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24701803 - 24701849
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24701803 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 24701849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24704253 - 24704299
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24704253 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 24704299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26356564 - 26356518
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26356564 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 26356518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26359016 - 26358970
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26359016 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 26358970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27216423 - 27216469
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  27216423 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 27216469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32125047 - 32125093
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  32125047 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 32125093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41522485 - 41522531
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  41522485 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 41522531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41524947 - 41524993
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  41524947 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 41524993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 10064187 - 10064143
Alignment:
Q  198 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaat 242  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  10064187 cttgactatgcaacttaatcctctaatcatgcatgtggtaccaat 10064143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 1543554 - 1543493
Alignment:
Q  221 taatcatgcatgtggtaccaatctt--tgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||| |  |||||||||||||||||| || |||||||||||||    
T  1543554 taatcatgcatgtggtaccaatcatattgagcgtaaataggctcctagagcatcaagccctc 1543493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 20110398 - 20110434
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  20110398 tttgagcgtaaataggctcccagggcatcaagccctc 20110434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 29329240 - 29329204
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  29329240 tttgagcgtaaataggctcccagggcatcaagccctc 29329204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 44116351 - 44116387
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  44116351 tttgagcgtaaataggctcccagggcatcaagccctc 44116387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 48273190 - 48273226
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  48273190 tttgagcgtaaataggctcccagggcatcaagccctc 48273226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 20110354 - 20110389
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccct 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  20110354 tttgagcgtaaataggctcccagggcatcaagccct 20110389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 32300921 - 32300956
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  32300921 ttgagcgtaaataggctcccagggcatcaagccctc 32300956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 38227304 - 38227339
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  38227304 ttgagcgtaaataggctcccagggcatcaagccctc 38227339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 42461692 - 42461739
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatct 244  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  42461692 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatct 42461739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 38519115 - 38519161
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  38519115 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 38519161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 11393606 - 11393570
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11393606 tttgagcgtaaaaaggctcccagggcatcaagccctc 11393570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 11972339 - 11972375
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11972339 tttgagcgtaaaaaggctcccagggcatcaagccctc 11972375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 14949441 - 14949405
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  14949441 tttgagcgtaaaaaggctcccagggcatcaagccctc 14949405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 15377032 - 15376996
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15377032 tttgagcgtaaaaaggctcccagggcatcaagccctc 15376996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 16409902 - 16409938
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16409902 tttgagcgtaaaaaggctcccagggcatcaagccctc 16409938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 16995967 - 16996011
Alignment:
Q  200 tgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  16995967 tgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 16996011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 17062196 - 17062160
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17062196 tttgatcgtaaataggctcccagggcatcaagccctc 17062160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 18427375 - 18427411
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  18427375 tttgagcgtaaaaaggctcccagggcatcaagccctc 18427411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 18456688 - 18456652
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18456688 tttgagcgtaaataggctcccagggcatcaaggcctc 18456652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 20385442 - 20385406
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20385442 tttgagcgtaaaaaggctcccagggcatcaagccctc 20385406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 21189914 - 21189878
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21189914 tttgagcgtaaaaaggctcccagggcatcaagccctc 21189878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 24702081 - 24702117
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24702081 tttgagcgtaaaaaggctcccagggcatcaagccctc 24702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 24704531 - 24704567
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24704531 tttgagcgtaaaaaggctcccagggcatcaagccctc 24704567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 27216703 - 27216739
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27216703 tttgagcgtaaaaaggctcccagggcatcaagccctc 27216739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 32125334 - 32125370
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32125334 tttgagcgtaaaaaggctcccagggcatcaagccctc 32125370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 41522760 - 41522796
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  41522760 tttgagcgtaaaaaggctcccagggcatcaagccctc 41522796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 41525222 - 41525258
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  41525222 tttgagcgtaaaaaggctcccagggcatcaagccctc 41525258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 8852297 - 8852262
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  8852297 ttgagcgtaaataggctcacagggcatcaagccctc 8852262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 9033685 - 9033642
Alignment:
Q  201 gactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  9033685 gactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 9033642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 11066388 - 11066423
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  11066388 ttgagcgtaaataggctcacagggcatcaagccctc 11066423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 12371264 - 12371299
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  12371264 ttgagcgtaaataggctcacagggcatcaagccctc 12371299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 13150710 - 13150675
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  13150710 ttgagcgtaaataggctcacagggcatcaagccctc 13150675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 14183692 - 14183657
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  14183692 ttgagcgtaaataggctcacagggcatcaagccctc 14183657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 18075617 - 18075582
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  18075617 ttgagcgtaaataggctcacagggcatcaagccctc 18075582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 20619205 - 20619240
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  20619205 ttgagcgtaaataggctcacagggcatcaagccctc 20619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 131193 - 131148
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  131193 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 131148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 11066346 - 11066380
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccct 279  Q
    |||||||||||||||||| ||||||||||||||||    
T  11066346 ttgagcgtaaataggctcacagggcatcaagccct 11066380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 11525941 - 11525896
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  11525941 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 11525896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 17017795 - 17017749
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  17017795 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 17017749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 456164 - 456200
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  456164 tttgagcgtaaaaaggatcccagggcatcaagccctc 456200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 9390228 - 9390184
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 241  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  9390228 cttgactatgcaacttcaacttcttaatcatgcatgtggtaccaa 9390184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 15082200 - 15082165
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15082200 tttgagcgtaaataggct-ccagggcatcaagccctc 15082165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 16232363 - 16232399
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  16232363 tttgagcctaaaaaggctcccagggcatcaagccctc 16232399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 26356278 - 26356242
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| |||||| |||||||||||||||||    
T  26356278 tttgagcgtaaaaaggctcacagggcatcaagccctc 26356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 26358730 - 26358694
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| |||||| |||||||||||||||||    
T  26358730 tttgagcgtaaaaaggctcacagggcatcaagccctc 26358694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 29329196 - 29329160
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||| || |||||||||||||    
T  29329196 tttgagcgtaaataggctcctagagcatcaagccctc 29329160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 48273234 - 48273270
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| |||||||||||||||||| |||||    
T  48273234 tttgagcgtaaaaaggctcccagggcatcaaaccctc 48273270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 571074 - 571232
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  571074 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 571173  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  571174 aatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctc 571232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 18808612 - 18808778
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  18808612 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 18808711  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18808712 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 18808778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 32039983 - 32039825
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  32039983 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataacttgacaacctgacaacttaacctcttgactatgcaacttaatcttct 32039884  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32039883 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 32039825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 23710025 - 23709859
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  23710025 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 23709926  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23709925 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccctc 23709859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 24906125 - 24905960
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24906125 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24906026  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24906025 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 24905960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 24908600 - 24908435
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24908600 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24908501  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24908500 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 24908435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 124 - 280
Target Start/End: Original strand, 26507529 - 26507692
Alignment:
Q  124 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  26507529 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaa 26507628  T
Q  216 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26507629 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 26507692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 24901171 - 24901006
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24901171 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24901072  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24901071 aatcttctaatcatgcatgtggtaccaatatttgagcgtaaataggct-ccagggcatcaagccctc 24901006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 24903648 - 24903483
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24903648 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24903549  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24903548 aatcttctaatcatgcatgtggtaccaatatttgagcgtaaataggct-ccagggcatcaagccctc 24903483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 127 - 280
Target Start/End: Original strand, 23135265 - 23135425
Alignment:
Q  127 cacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaatct 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  23135265 cacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaatct 23135364  T
Q  219 tctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23135365 tctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 23135425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 39681983 - 39682148
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||||||    
T  39681983 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacctgataacttgacaacttgacaacttaacctcttgactatgcaactt 39682082  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  39682083 aatcttctaatcatgcatgtggtatcaatctttgagcgtaaataggct-ccagggcatcaagccctc 39682148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 124 - 280
Target Start/End: Original strand, 26505051 - 26505214
Alignment:
Q  124 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaa 215  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  26505051 aatcgcagttttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaa 26505150  T
Q  216 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26505151 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 26505214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 34402992 - 34402872
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34402992 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 34402893  T
Q  222 aatcatgcatgtggtaccaat 242  Q
    |||||||||||||||||||||    
T  34402892 aatcatgcatgtggtaccaat 34402872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 24898696 - 24898523
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt----------------aacctcttgacta 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||    
T  24898696 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttgacaacttaacctcttgacta 24898597  T
Q  206 tgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24898596 tgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 24898523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 45030308 - 45030185
Alignment:
Q  154 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgt 252  Q
    |||||||| |||||||||||||||| || ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45030308 acaacttatcaactcgacaacttgacaatcttgacaactcgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgt 45030209  T
Q  253 aaataggctcccagggcatcaagc 276  Q
    ||||||||||||||||||||||||    
T  45030208 aaataggctcccagggcatcaagc 45030185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 28576852 - 28576934
Alignment:
Q  198 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28576852 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgttaataggctcccagggcatcaagccctc 28576934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 23130547 - 23130674
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgat--------aacttgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  23130547 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 23130646  T
Q  214 aatcttctaatcatgcatgtggtaccaat 242  Q
    |  | ||| || |||||||||||||||||    
T  23130647 agacctcttat-atgcatgtggtaccaat 23130674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 23133014 - 23133141
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgat--------aacttgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  23133014 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 23133113  T
Q  214 aatcttctaatcatgcatgtggtaccaat 242  Q
    |  | ||| || |||||||||||||||||    
T  23133114 agacctcttat-atgcatgtggtaccaat 23133141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 24530022 - 24529917
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||                ||||||||||||||||||||||||    
T  24530022 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaa----------------cttgactatgcaacttaatcttct 24529939  T
Q  222 aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||||||||    
T  24529938 aatcatgcatgtggtaccaatc 24529917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18808491 - 18808537
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  18808491 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 18808537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23135140 - 23135186
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  23135140 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 23135186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23710146 - 23710100
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  23710146 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 23710100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24898817 - 24898771
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24898817 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 24898771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24901292 - 24901246
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24901292 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 24901246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24903769 - 24903723
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24903769 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 24903723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24906246 - 24906200
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24906246 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 24906200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24908721 - 24908675
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24908721 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 24908675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26504928 - 26504974
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26504928 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 26504974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26507406 - 26507452
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26507406 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 26507452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32040104 - 32040058
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  32040104 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 32040058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34403113 - 34403067
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  34403113 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 34403067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39681862 - 39681908
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  39681862 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 39681908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 570953 - 570999
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  570953 atttaacaacatatgcatcatcaatcatatttaacaactcatagaca 570999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23130426 - 23130472
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||    
T  23130426 atttaacaacataaacatcatcaatcatatttaacaactcatagaca 23130472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23132893 - 23132939
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||    
T  23132893 atttaacaacataaacatcatcaatcatatttaacaactcatagaca 23132939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 21155422 - 21155386
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  21155422 tttgagcgtaaataggctcccagggcatcaagccctc 21155386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 23712375 - 23712339
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  23712375 tttgagcgtaaataggctcccagggcatcaagccctc 23712339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 24529893 - 24529857
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  24529893 tttgagcgtaaataggctcccagggcatcaagccctc 24529857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 18547323 - 18547277
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  18547323 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 18547277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 34136683 - 34136729
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  34136683 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 34136729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 43947705 - 43947659
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  43947705 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 43947659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 6576156 - 6576189
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccc 278  Q
    ||||||||||||||||||||||||||||||||||    
T  6576156 ttgagcgtaaataggctcccagggcatcaagccc 6576189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 571240 - 571276
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  571240 tttgagcgtaaaaaggctcccagggcatcaagccctc 571276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 6725795 - 6725831
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||| ||||||||||||    
T  6725795 tttgagcgtaaataggctcccaggacatcaagccctc 6725831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 18808786 - 18808822
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  18808786 tttgagcgtaaaaaggctcccagggcatcaagccctc 18808822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 23135433 - 23135469
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23135433 tttgagcgtaaaaaggctcccagggcatcaagccctc 23135469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 23709851 - 23709815
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23709851 tttgagcgtaaaaaggctcccagggcatcaagccctc 23709815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 23712332 - 23712296
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23712332 tttgagcgtaaaaaggctcccagggcatcaagccctc 23712296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 24898515 - 24898479
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24898515 tttgagcgtaaaaaggctcccagggcatcaagccctc 24898479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 24900998 - 24900962
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24900998 tttgagcgtaaaaaggctcccagggcatcaagccctc 24900962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 24903475 - 24903439
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24903475 tttgagcgtaaaaaggctcccagggcatcaagccctc 24903439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 24905952 - 24905916
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24905952 tttgagcgtaaaaaggctcccagggcatcaagccctc 24905916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 24908427 - 24908391
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24908427 tttgagcgtaaaaaggctcccagggcatcaagccctc 24908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 26505222 - 26505258
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  26505222 tttgagcgtaaaaaggctcccagggcatcaagccctc 26505258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 26507700 - 26507736
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  26507700 tttgagcgtaaaaaggctcccagggcatcaagccctc 26507736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 28576942 - 28576978
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28576942 tttgagcgtaaaaaggctcccagggcatcaagccctc 28576978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 32039817 - 32039781
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32039817 tttgagcgtaaaaaggctcccagggcatcaagccctc 32039781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 5032496 - 5032461
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  5032496 ttgagcgtaaataggctcacagggcatcaagccctc 5032461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 9974845 - 9974880
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  9974845 ttgagcgtaaataggctcacagggcatcaagccctc 9974880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 19202336 - 19202301
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  19202336 ttgagcgtaaataggctcacagggcatcaagccctc 19202301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 24435973 - 24436008
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  24435973 ttgagcgtaaataggctcacagggcatcaagccctc 24436008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 24781995 - 24781960
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  24781995 ttgagcgtaaataggctcacagggcatcaagccctc 24781960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 277
Target Start/End: Complemental strand, 24643270 - 24643237
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagcc 277  Q
    |||||||||||| |||||||||||||||||||||    
T  24643270 tttgagcgtaaaaaggctcccagggcatcaagcc 24643237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 280
Target Start/End: Complemental strand, 24643306 - 24643277
Alignment:
Q  251 gtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||    
T  24643306 gtaaataggctcccagggcatcaagccctc 24643277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 39828333 - 39828288
Alignment:
Q  199 ttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||    
T  39828333 ttgactatgcaacttaattctcttaatcatgcatgtggtaccaatc 39828288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 6725838 - 6725874
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| |||||| |||||||||||||||||    
T  6725838 tttgagcgtaaaaaggctctcagggcatcaagccctc 6725874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 19202268 - 19202236
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  19202268 agcgtaaataggctcacagggcatcaagccctc 19202236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 21155379 - 21155343
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  21155379 tttgagcgtaaaaaggctcccaaggcatcaagccctc 21155343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 22500805 - 22500837
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  22500805 agcgtaaataggctcacagggcatcaagccctc 22500837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 22508739 - 22508771
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  22508739 agcgtaaataggctcacagggcatcaagccctc 22508771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 24367617 - 24367652
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24367617 tttgagcgtaaataggct-ccagggcatcaagccctc 24367652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 24865783 - 24865751
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  24865783 agcgtaaataggctcacagggcatcaagccctc 24865751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 24865890 - 24865858
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  24865890 agcgtaaataggctcacagggcatcaagccctc 24865858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 39682156 - 39682192
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  39682156 tttgagcgtaaaaaggctccaagggcatcaagccctc 39682192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 45030173 - 45030137
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  45030173 tttgagcgtaaaaaggatcccagggcatcaagccctc 45030137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 2e-82; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 23594220 - 23594062
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23594220 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 23594121  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23594120 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 23594062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 21475572 - 21475414
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21475572 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 21475473  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21475472 aatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctc 21475414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 13988579 - 13988745
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  13988579 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 13988678  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13988679 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccctc 13988745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 21923784 - 21923618
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  21923784 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 21923685  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21923684 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccctc 21923618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 41372783 - 41372907
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  41372783 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataacttgacaacttgacaacttaacctattgactatgcaacttaatcttct 41372882  T
Q  222 aatcatgcatgtggtaccaatcttt 246  Q
    |||||||||||||||||||||||||    
T  41372883 aatcatgcatgtggtaccaatcttt 41372907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13988458 - 13988504
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  13988458 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 13988504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21475693 - 21475647
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  21475693 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 21475647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21923905 - 21923859
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  21923905 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 21923859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23594341 - 23594295
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  23594341 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 23594295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41372662 - 41372708
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  41372662 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 41372708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 21711589 - 21711625
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  21711589 tttgagcgtaaataggctcccagggcatcaagccctc 21711625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 22123387 - 22123351
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  22123387 tttgagcgtaaataggctcccagggcatcaagccctc 22123351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 22123430 - 22123394
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  22123430 tttgagcgtaaataggctcccagggcatcaagccctc 22123394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 27161782 - 27161746
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  27161782 tttgagcgtaaataggctcccagggcatcaagccctc 27161746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 40389037 - 40389073
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  40389037 tttgagcgtaaataggctcccagggcatcaagccctc 40389073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 431559 - 431594
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  431559 ttgagcgtaaataggctcccagggcatcaagccctc 431594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 23967569 - 23967604
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  23967569 ttgagcgtaaataggctcccagggcatcaagccctc 23967604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 20316158 - 20316204
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  20316158 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 20316204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 21043659 - 21043613
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  21043659 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 21043613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 22118556 - 22118602
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22118556 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 22118602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 48520036 - 48520082
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  48520036 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 48520082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 23967499 - 23967544
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaat 242  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  23967499 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaat 23967544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 40388996 - 40389029
Alignment:
Q  247 gagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||    
T  40388996 gagcgtaaataggctcccagggcatcaagccctc 40389029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 21923610 - 21923574
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21923610 tttgagcgtaaaaaggctcccagggcatcaagccctc 21923574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 23594054 - 23594018
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23594054 tttgagcgtaaaaaggctcccagggcatcaagccctc 23594018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 29297937 - 29297973
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||| |||||||||||||||||    
T  29297937 tttgagcgtaaataggctcacagggcatcaagccctc 29297973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 31612111 - 31612147
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31612111 tttgagcgtaaataggctcctagggcatcaagccctc 31612147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 31612155 - 31612191
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||| |||||    
T  31612155 tttgagcgtaaataggctcccagggcatcaaaccctc 31612191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 20316228 - 20316263
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||| ||||||||||||||    
T  20316228 ttgagcgtaaataggctcccaaggcatcaagccctc 20316263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 35088395 - 35088430
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  35088395 ttgagcgtaaataggctcacagggcatcaagccctc 35088430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 20587650 - 20587684
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccct 279  Q
    |||||||||||||||||| ||||||||||||||||    
T  20587650 ttgagcgtaaataggctcacagggcatcaagccct 20587684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 20592188 - 20592222
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccct 279  Q
    |||||||||||||||||| ||||||||||||||||    
T  20592188 ttgagcgtaaataggctcacagggcatcaagccct 20592222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 47190382 - 47190427
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  47190382 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 47190427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 52954694 - 52954649
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  52954694 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 52954649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 20957935 - 20957979
Alignment:
Q  200 tgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||    
T  20957935 tgactctgcaacttattcttcttaatcatgcatgtggtaccaatc 20957979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 21475406 - 21475370
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  21475406 tttgagcgtaaaaaggctcctagggcatcaagccctc 21475370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 21707007 - 21707039
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||| |||||||||||||||||||    
T  21707007 agcgtaaataggcacccagggcatcaagccctc 21707039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 21707047 - 21707083
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||  |||||||||||||    
T  21707047 tttgagcgtaaataggctcccattgcatcaagccctc 21707083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 21711549 - 21711581
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||| |||||||||||||||||||    
T  21711549 agcgtaaataggcacccagggcatcaagccctc 21711581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 27161821 - 27161789
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||| |||||    
T  27161821 agcgtaaataggctcccagggcatcaaaccctc 27161789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 29297980 - 29298016
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  29297980 tttgagcataaaaaggctcccagggcatcaagccctc 29298016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 35088436 - 35088472
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  35088436 tttgagcgtaaataggctcacagggcatcaaaccctc 35088472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 35982211 - 35982167
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 241  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  35982211 cttgactatgcaacttcaacttcttaatcatgcatgtggtaccaa 35982167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 6e-80; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 10733424 - 10733267
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10733424 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 10733325  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10733324 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 10733267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 29348131 - 29348288
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29348131 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 29348230  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29348231 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 29348288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 29350604 - 29350761
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29350604 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 29350703  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29350704 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 29350761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 42245849 - 42245692
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42245849 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 42245750  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42245749 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 42245692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 125 - 280
Target Start/End: Complemental strand, 265258 - 265095
Alignment:
Q  125 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaacttaat 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  265258 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaat 265159  T
Q  217 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  265158 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 265095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 20908681 - 20908847
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  20908681 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcaacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20908780  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20908781 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctc 20908847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 29345650 - 29345815
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  29345650 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 29345749  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29345750 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 29345815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 39363084 - 39363196
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  39363084 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 39363175  T
Q  222 aatcatgcatgtggtaccaat 242  Q
    |||||||||||||||||||||    
T  39363176 aatcatgcatgtggtaccaat 39363196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 122 - 245
Target Start/End: Original strand, 31143957 - 31144074
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaact--taatctt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||  |||||||    
T  31143957 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttataatctt 31144048  T
Q  220 ctaatcatgcatgtggtaccaatctt 245  Q
    ||||||||||||||||||||||||||    
T  31144049 ctaatcatgcatgtggtaccaatctt 31144074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 198 - 276
Target Start/End: Original strand, 39244889 - 39244967
Alignment:
Q  198 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagc 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  39244889 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccatgccatcaagc 39244967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 2155105 - 2155000
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||                ||||||||||||||||||||||||    
T  2155105 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaa----------------cttgactatgcaacttaatcttct 2155022  T
Q  222 aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||||||||    
T  2155021 aatcatgcatgtggtaccaatc 2155000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 265375 - 265329
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  265375 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 265329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10733545 - 10733499
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  10733545 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 10733499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20908560 - 20908606
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20908560 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 20908606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29345529 - 29345575
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29345529 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 29345575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29348010 - 29348056
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29348010 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 29348056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29350483 - 29350529
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29350483 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 29350529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31143836 - 31143882
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  31143836 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 31143882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42245970 - 42245924
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  42245970 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 42245924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39362963 - 39363009
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  39362963 atttaacaacataagcatcatcaatcatacttaacaactcatagaca 39363009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 11581563 - 11581527
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  11581563 tttgagcgtaaataggctcccagggcatcaagccctc 11581527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 14047921 - 14047957
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  14047921 tttgagcgtaaataggctcccagggcatcaagccctc 14047957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 14047965 - 14048001
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  14047965 tttgagcgtaaataggctcccagggcatcaagccctc 14048001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 20918309 - 20918273
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  20918309 tttgagcgtaaataggctcccagggcatcaagccctc 20918273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 22411986 - 22412022
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  22411986 tttgagcgtaaataggctcccagggcatcaagccctc 22412022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 36155062 - 36155026
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  36155062 tttgagcgtaaataggctcccagggcatcaagccctc 36155026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 26733166 - 26733120
Alignment:
Q  198 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  26733166 cttgactatgcaacttaatcctcataatcatgcatgtggtaccaatc 26733120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 24066993 - 24067026
Alignment:
Q  247 gagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||    
T  24066993 gagcgtaaataggctcccagggcatcaagccctc 24067026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 265087 - 265051
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  265087 tttgagcgtaaaaaggctcccagggcatcaagccctc 265051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 2154933 - 2154897
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2154933 tttgagcgtaaaaaggctcccagggcatcaagccctc 2154897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 2154976 - 2154940
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||| |||||||||||||||||||||||||||||    
T  2154976 tttgagcataaataggctcccagggcatcaagccctc 2154940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 11581519 - 11581483
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||| ||||||||    
T  11581519 tttgagcgtaaataggctcccagggcatgaagccctc 11581483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 20908855 - 20908891
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20908855 tttgagcgtaaaaaggctcccagggcatcaagccctc 20908891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 22412033 - 22412065
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||    
T  22412033 agcgtaaataggctcccagggcatcaagccctc 22412065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 29329734 - 29329770
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29329734 tttgagcgtaaataggctcccagggcatcaaaccctc 29329770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 29345823 - 29345859
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29345823 tttgagcgtaaaaaggctcccagggcatcaagccctc 29345859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 29348296 - 29348332
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29348296 tttgagcgtaaaaaggctcccagggcatcaagccctc 29348332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 29350769 - 29350805
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29350769 tttgagcgtaaaaaggctcccagggcatcaagccctc 29350805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 42245684 - 42245648
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42245684 tttgagcgtaaaaaggctcccagggcatcaagccctc 42245648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 21309098 - 21309063
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  21309098 ttgagcgtaaataggctcacagggcatcaagccctc 21309063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 23202900 - 23202861
Alignment:
Q  204 tatgcaacttaatcttctaatcatgcatgtggtaccaatc 243  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  23202900 tatgcaacttcaacttctaatcatgcatgtggtaccaatc 23202861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 23469549 - 23469592
Alignment:
Q  201 gactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  23469549 gactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 23469592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 15796166 - 15796212
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||    
T  15796166 cttgactatgcaactctatcttcttaatcatgcatgtggtaccaatc 15796212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 21732304 - 21732259
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21732304 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 21732259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 21809955 - 21809910
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21809955 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 21809910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 26741022 - 26740976
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  26741022 cttgactatccaacttaatcctcttaatcatgcatgtggtaccaatc 26740976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 16227522 - 16227563
Alignment:
Q  204 tatgcaacttaatcttct-aatcatgcatgtggtaccaatct 244  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  16227522 tatgcaacttaatcctcttaatcatgcatgtggtaccaatct 16227563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 280
Target Start/End: Complemental strand, 18319310 - 18319277
Alignment:
Q  247 gagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||| |||||||||||||||||    
T  18319310 gagcgtaaataggctctcagggcatcaagccctc 18319277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 10775995 - 10775960
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| ||||||||||||||||||    
T  10775995 tttgagcgtaaataggct-ccagggcatcaagccctc 10775960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 12122577 - 12122545
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  12122577 agcgtaaataggctcacagggcatcaagccctc 12122545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 17874987 - 17875019
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  17874987 agcgtaaataggctcacagggcatcaagccctc 17875019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 25743507 - 25743554
Alignment:
Q  198 cttgactatgcaacttaatcttct--aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||  |||||||  ||||||||||||||||||||||    
T  25743507 cttgactatgcaactctatcttcttaaatcatgcatgtggtaccaatc 25743554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 276
Target Start/End: Original strand, 29329777 - 29329809
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagc 276  Q
    |||||||||||| ||||||||||||||||||||    
T  29329777 tttgagcgtaaaaaggctcccagggcatcaagc 29329809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 32027193 - 32027229
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  32027193 tttgagcgtaaataggctctcagggcattaagccctc 32027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 280
Target Start/End: Complemental strand, 36155098 - 36155070
Alignment:
Q  252 taaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||    
T  36155098 taaataggctcccagggcatcaagccctc 36155070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 39244979 - 39245015
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  39244979 tttgagcgtaaaaaggcttccagggcatcaagccctc 39245015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 6e-80; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 16454765 - 16454608
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16454765 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 16454666  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16454665 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 16454608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 9708099 - 9707933
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  9708099 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 9708000  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9707999 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 9707933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 34158995 - 34159161
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  34158995 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 34159094  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34159095 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 34159161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 55500620 - 55500777
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  55500620 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcaacaacttgacaacttgacaacttaacttcttgactatgcaacttaatcttct 55500719  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  55500720 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ctagggcatcaagccctc 55500777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 17462847 - 17463013
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  17462847 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 17462946  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17462947 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctc 17463013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 45607384 - 45607234
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  45607384 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttct 45607293  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45607292 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 45607234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 125 - 280
Target Start/End: Complemental strand, 13152265 - 13152118
Alignment:
Q  125 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaat 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  13152265 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttctaat 13152174  T
Q  225 catgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13152173 catgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 13152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 125 - 280
Target Start/End: Complemental strand, 13154730 - 13154583
Alignment:
Q  125 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaat 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  13154730 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttctaat 13154639  T
Q  225 catgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13154638 catgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 13154583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 7781801 - 7781636
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  7781801 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataactggacaacttgacaacttaacctcttgactatgcaactt 7781702  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7781701 aatcttctaaacatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 7781636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 10248199 - 10248050
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  10248199 agaatcacagctttcaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttct 10248108  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10248107 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 10248050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 55476191 - 55476303
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  55476191 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 55476282  T
Q  222 aatcatgcatgtggtaccaat 242  Q
    |||||||||||||||||||||    
T  55476283 aatcatgcatgtggtaccaat 55476303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 15977236 - 15977347
Alignment:
Q  169 gacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccaggg 268  Q
    ||||||| || |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15977236 gacaactcgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcataaataggctcccaggg 15977335  T
Q  269 catcaagccctc 280  Q
    ||||||||||||    
T  15977336 catcaagccctc 15977347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 6469563 - 6469457
Alignment:
Q  174 cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatca 273  Q
    ||||| |||| |||||||| ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6469563 cttgacaactcgacaacttgacaacttgattatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccaggacatca 6469464  T
Q  274 agccctc 280  Q
    |||||||    
T  6469463 agccctc 6469457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 45578247 - 45578165
Alignment:
Q  198 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45578247 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctc 45578165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 28849043 - 28848938
Alignment:
Q  174 cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatca 273  Q
    ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  28849043 cttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcataaataggct-ccagggcatca 28848945  T
Q  274 agccctc 280  Q
    |||||||    
T  28848944 agccctc 28848938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 29173059 - 29172969
Alignment:
Q  154 acaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 244  Q
    ||||||| |||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29173059 acaacttgacaacttgataacttgacaactcgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 29172969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 21618184 - 21618266
Alignment:
Q  162 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 243  Q
    |||||| ||||| ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  21618184 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 21618266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 36166290 - 36166372
Alignment:
Q  162 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 243  Q
    |||||| ||||| ||||| |||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  36166290 acaacttgacaatcttgacaactcgacgacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 36166372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7781922 - 7781876
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  7781922 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 7781876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13152389 - 13152343
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  13152389 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 13152343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16454886 - 16454840
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  16454886 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 16454840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17462726 - 17462772
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  17462726 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 17462772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34158874 - 34158920
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  34158874 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 34158920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45607505 - 45607459
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  45607505 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 45607459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 55476070 - 55476116
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  55476070 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 55476116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 55500499 - 55500545
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  55500499 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 55500545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13154854 - 13154809
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagac 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13154854 atttaacaacataagcatcatcaatcatatttaacaactcatagac 13154809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9708220 - 9708174
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||    
T  9708220 atttaacaacataaacatcatcaatcatatttaacaactcatagaca 9708174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15555364 - 15555410
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  15555364 atttaacaacataagcatcatcaatcatatttaacaattcatagaca 15555410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 8898894 - 8898930
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  8898894 tttgagcgtaaataggctcccagggcatcaagccctc 8898930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 21618290 - 21618326
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  21618290 tttgagcgtaaataggctcccagggcatcaagccctc 21618326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 24153484 - 24153448
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  24153484 tttgagcgtaaataggctcccagggcatcaagccctc 24153448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 36166396 - 36166432
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  36166396 tttgagcgtaaataggctcccagggcatcaagccctc 36166432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 41123690 - 41123726
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  41123690 tttgagcgtaaataggctcccagggcatcaagccctc 41123726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10248321 - 10248274
Alignment:
Q  1 atttaacaacataagcatcatcaatcata-tttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  10248321 atttaacaacataagcatcatcaatcatagtttaacaactcatagaca 10248274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 43890116 - 43890081
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  43890116 ttgagcgtaaataggctcccagggcatcaagccctc 43890081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 9577449 - 9577495
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  9577449 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 9577495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 15206668 - 15206725
Alignment:
Q  187 caacttaacctcttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||  |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  15206668 caacttaacaacttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 15206725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 6469449 - 6469413
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6469449 tttgagcgtaaaaaggctcccagggcatcaagccctc 6469413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 7781628 - 7781592
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  7781628 tttgagcgtaaaaaggctcccagggcatcaagccctc 7781592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 10248042 - 10248006
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10248042 tttgagcgtaaaaaggctcccagggcatcaagccctc 10248006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 13152110 - 13152074
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13152110 tttgagcgtaaaaaggctcccagggcatcaagccctc 13152074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 13154575 - 13154539
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13154575 tttgagcgtaaaaaggctcccagggcatcaagccctc 13154539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 15977355 - 15977391
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15977355 tttgagcgtaaaaaggctcccagggcatcaagccctc 15977391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 16283130 - 16283094
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16283130 tttgagcgtaaaaaggctcccagggcatcaagccctc 16283094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 16283173 - 16283137
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||| |||||||||    
T  16283173 tttgagcgtaaataggctcccagggcaacaagccctc 16283137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 16454600 - 16454564
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16454600 tttgagcgtaaaaaggctcccagggcatcaagccctc 16454564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 17447016 - 17446980
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||| |||||    
T  17447016 tttgagcgtaaataggctcccagggcatcaatccctc 17446980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 17463021 - 17463057
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17463021 tttgagcgtaaaaaggctcccagggcatcaagccctc 17463057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 28848930 - 28848894
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28848930 tttgagcgtaaaaaggctcccagggcatcaagccctc 28848894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 29172903 - 29172867
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||| ||||||||||||||||||||||||||||||    
T  29172903 tttgagtgtaaataggctcccagggcatcaagccctc 29172867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 29172946 - 29172910
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||| |||||||||||||||||||||||||||||||    
T  29172946 tttgaacgtaaataggctcccagggcatcaagccctc 29172910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 34159169 - 34159205
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  34159169 tttgagcgtaaaaaggctcccagggcatcaagccctc 34159205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 36166440 - 36166476
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36166440 tttgagcgtaaaaaggctcccagggcatcaagccctc 36166476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 45578157 - 45578121
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  45578157 tttgagcgtaaaaaggctcccagggcatcaagccctc 45578121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 45607226 - 45607190
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  45607226 tttgagcgtaaaaaggctcccagggcatcaagccctc 45607190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 45796756 - 45796822
Alignment:
Q  221 taatcatgcatgtggtaccaatct-------ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||    
T  45796756 taatcatgcatgtggtaccaatcaaatcatattgagcgtaaataggctcccagagcatcaagccctc 45796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 55500785 - 55500821
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  55500785 tttgagcgtaaaaaggctcccagggcatcaagccctc 55500821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 9707925 - 9707890
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9707925 ttgagcgtaaaaaggctcccagggcatcaagccctc 9707890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 14497133 - 14497168
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||| |||||||||||||    
T  14497133 ttgagcgtaaataggctcccagagcatcaagccctc 14497168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 14507824 - 14507859
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  14507824 ttgagcgtaaataggctcacagggcatcaagccctc 14507859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 15932586 - 15932551
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  15932586 ttgagcgtaaataggctcacagggcatcaagccctc 15932551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 17538050 - 17538085
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  17538050 ttgagcgtaaataggctcacagggcatcaagccctc 17538085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 17548647 - 17548612
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  17548647 ttgagcgtaaataggctcacagggcatcaagccctc 17548612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 18700806 - 18700771
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18700806 ttgagcgtaaataggctcccagggcatcaagacctc 18700771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 22307692 - 22307657
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  22307692 ttgagcgtaaataggctcacagggcatcaagccctc 22307657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 158
Target Start/End: Complemental strand, 29173107 - 29173072
Alignment:
Q  123 gaatcacagctttaaacaatttcatgatttaacaac 158  Q
    ||||||||||||||||||||||||| ||||||||||    
T  29173107 gaatcacagctttaaacaatttcataatttaacaac 29173072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 40806916 - 40806951
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  40806916 ttgagcgtaaataggctcacagggcatcaagccctc 40806951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 41173451 - 41173416
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  41173451 ttgagcgtaaataggctcacagggcatcaagccctc 41173416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 12377703 - 12377749
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  12377703 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 12377749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 13031857 - 13031823
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccct 279  Q
    |||||||||||||||||| ||||||||||||||||    
T  13031857 ttgagcgtaaataggctcacagggcatcaagccct 13031823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 13919110 - 13919156
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  13919110 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 13919156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 15245761 - 15245807
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  15245761 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 15245807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 15264882 - 15264928
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  15264882 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 15264928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 32404527 - 32404482
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  32404527 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 32404482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 8898937 - 8898973
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| |||||||||| |||||||||||||    
T  8898937 tttgagcgtaaaaaggctcccagagcatcaagccctc 8898973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 17446973 - 17446937
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  17446973 tttgagcgtaaaaaggctccaagggcatcaagccctc 17446937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 38962210 - 38962175
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| ||||||||||||||||||    
T  38962210 tttgagcgtaaataggct-ccagggcatcaagccctc 38962175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 147; Significance: 1e-77; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 13624 - 13782
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13624 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcgacttaatcttct 13723  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  13724 aatcatgcatgtggtaccaatctttgagcgcaaataggctcctagggcatcaagccctc 13782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13503 - 13549
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  13503 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 13549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 13790 - 13826
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13790 tttgagcgtaaaaaggctcccagggcatcaagccctc 13826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 1e-77; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 1541395 - 1541238
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1541395 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 1541296  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1541295 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 1541238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 12741995 - 12742152
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12741995 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 12742094  T
Q  222 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12742095 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 12742152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 2291673 - 2291507
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  2291673 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 2291574  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2291573 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 2291507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 8054698 - 8054864
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  8054698 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 8054797  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8054798 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 8054864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 18335085 - 18334919
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  18335085 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 18334986  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18334985 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 18334919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 19004715 - 19004881
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  19004715 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 19004814  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19004815 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 19004881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 24422216 - 24422382
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  24422216 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24422315  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24422316 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 24422382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 33863947 - 33864113
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  33863947 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 33864046  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33864047 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 33864113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 22781941 - 22782106
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  22781941 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 22782040  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22782041 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 22782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 33861464 - 33861629
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  33861464 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 33861563  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33861564 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 33861629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 26925132 - 26924967
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  26925132 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 26925033  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26925032 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 26924967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 25591249 - 25591120
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||        ||||||||||||||||||||||||||    
T  25591249 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaatttgataacttgacaactcgacaacttaacctcttgactatgcaactt 25591150  T
Q  214 aatcttctaatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||||||||||||||||    
T  25591149 aatcttctaatcatgcatgtggtaccaatc 25591120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 25688245 - 25688358
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||        ||||||||||| ||||||||||||    
T  25688245 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactcgataacttgacaa--------cttgactatgccacttaatcttct 25688336  T
Q  222 aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||||||||    
T  25688337 aatcatgcatgtggtaccaatc 25688358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 149 - 280
Target Start/End: Complemental strand, 19859378 - 19859246
Alignment:
Q  149 atttaacaacttaacaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttg 247  Q
    ||||| |||||| |||||| ||||| ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19859378 atttatcaacttgacaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttg 19859279  T
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    || |||||||| |||| ||||||||||||||||    
T  19859278 agtgtaaatagactcctagggcatcaagccctc 19859246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 25656472 - 25656528
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga 178  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25656472 agaataacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga 25656528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 25714170 - 25714233
Alignment:
Q  180 aacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 243  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  25714170 aactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 25714233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 25656524 - 25656569
Alignment:
Q  198 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25656524 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 25656569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 25714136 - 25714192
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga 178  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  25714136 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgacaacttga 25714192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2291794 - 2291748
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  2291794 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 2291748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8054577 - 8054623
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  8054577 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 8054623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12741874 - 12741920
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  12741874 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 12741920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18335206 - 18335160
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  18335206 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 18335160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19004594 - 19004640
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  19004594 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 19004640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22781820 - 22781866
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  22781820 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 22781866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24422095 - 24422141
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24422095 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 24422141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26925253 - 26925207
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26925253 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 26925207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33861343 - 33861389
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  33861343 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 33861389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33863826 - 33863872
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  33863826 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 33863872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 20557212 - 20557176
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  20557212 tttgagcgtaaataggctcccagggcatcaagccctc 20557176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 25688382 - 25688418
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  25688382 tttgagcgtaaataggctcccagggcatcaagccctc 25688418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 25714300 - 25714336
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  25714300 tttgagcgtaaataggctcccagggcatcaagccctc 25714336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1541517 - 1541470
Alignment:
Q  1 atttaacaacataagcatcatcaatcata-tttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  1541517 atttaacaacataagcatcatcaatcatagtttaacaactcatagaca 1541470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 20557255 - 20557220
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccct 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  20557255 tttgagcgtaaataggctcccagggcatcaagccct 20557220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 17230031 - 17229985
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17230031 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 17229985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 17742939 - 17742985
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17742939 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 17742985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 1595349 - 1595385
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||| |||||||||||||||||    
T  1595349 tttgagcgtaaataggctctcagggcatcaagccctc 1595385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 1595392 - 1595428
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1595392 tttgagcgtaaaaaggctcccagggcatcaagccctc 1595428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 12742160 - 12742196
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  12742160 tttgagcgtaaaaaggctcccagggcatcaagccctc 12742196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 16448806 - 16448770
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16448806 tttgaccgtaaataggctcccagggcatcaagccctc 16448770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 18334911 - 18334875
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  18334911 tttgagcgtaaaaaggctcccagggcatcaagccctc 18334875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 19004889 - 19004925
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19004889 tttgagcgtaaaaaggctcccagggcatcaagccctc 19004925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 19859238 - 19859202
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19859238 tttgagcgtaaaaaggctcccagggcatcaagccctc 19859202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 20136415 - 20136459
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 241  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  20136415 cttgactatgcaacttcatcttcttaatcatgcatgtggtaccaa 20136459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 22196454 - 22196410
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 241  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  22196454 cttgactatgcaacttcatcttcttaatcatgcatgtggtaccaa 22196410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 24422390 - 24422426
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24422390 tttgagcgtaaaaaggctcccagggcatcaagccctc 24422426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 26924959 - 26924923
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  26924959 tttgagcgtaaaaaggctcccagggcatcaagccctc 26924923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 33861637 - 33861673
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  33861637 tttgagcgtaaaaaggctcccagggcatcaagccctc 33861673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 33864121 - 33864157
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  33864121 tttgagcgtaaaaaggctcccagggcatcaagccctc 33864157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 16492893 - 16492938
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  16492893 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 16492938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 18896685 - 18896640
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  18896685 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 18896640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 35007894 - 35007939
Alignment:
Q  198 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  35007894 cttgactatgcaacttaa-cttcttaatcatgcatgtggtaccaatc 35007939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 280
Target Start/End: Complemental strand, 16448847 - 16448814
Alignment:
Q  247 gagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||| ||||||||||||||    
T  16448847 gagcgtaaataggctcccaaggcatcaagccctc 16448814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 1541230 - 1541194
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| |||||||| |||||||||||||||    
T  1541230 tttgagcgtaaaaaggctccctgggcatcaagccctc 1541194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 8054872 - 8054908
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  8054872 tttgagcgtaaaaaggctcccaaggcatcaagccctc 8054908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 18178048 - 18178001
Alignment:
Q  198 cttgactatgcaacttaatcttct--aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||  |||||||  ||||||||||||||||||||||    
T  18178048 cttgactatgcaactctatcttcttaaatcatgcatgtggtaccaatc 18178001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 25714257 - 25714293
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  25714257 tttgagcgtaaataggctcccagagcatcaaaccctc 25714293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 1837996 - 1837836
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctct--tgactatgcaacttaatctt 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  1837996 agaatcacagctttaaacaatttcatgatttaacaacttaccaactcgacaacttgacaacttgacaacttaacctctcttgactatgcaacttaatctt 1837897  T
Q  220 ctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1837896 ctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 1837836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 18239912 - 18239746
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  18239912 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 18239813  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18239812 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 18239746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 50222832 - 50222666
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  50222832 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 50222733  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50222732 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 50222666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 14718459 - 14718293
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  14718459 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 14718360  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14718359 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 14718293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 15118845 - 15118679
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  15118845 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 15118746  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15118745 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccctc 15118679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 12033624 - 12033500
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033624 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 12033525  T
Q  222 aatcatgcatgtggtaccaatcttt 246  Q
    |||||||||||||||||||||||||    
T  12033524 aatcatgcatgtggtaccaatcttt 12033500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 44614957 - 44615123
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgac-tatgcaact 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||    
T  44614957 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgacctatgcaact 44615056  T
Q  213 taatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44615057 taatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 44615123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 3514715 - 3514866
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  3514715 agaatcacaactttaaacaatttcatgatttaactacttaacaactcgacaacttgataacttgacaa--------cttgactatgcaacttaatcttct 3514806  T
Q  222 aatcatgcatgtggtaccaatc--tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
     ||||||||||||||||||| |   |||||||||||||||||| ||| |||||||||||||    
T  3514807 -atcatgcatgtggtaccaaccatattgagcgtaaataggctctcagtgcatcaagccctc 3514866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 44773533 - 44773414
Alignment:
Q  162 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 260  Q
    |||||| ||||| ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44773533 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcaagcatgtggtaccaatctttgagcgtaaataggc 44773434  T
Q  261 tcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||    
T  44773433 tcccagggcatcaagccctc 44773414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 7641609 - 7641509
Alignment:
Q  180 aacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 279  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7641609 aactcgacaacttgacaacttgactatgcaacttaatcttctaacattgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccct 7641510  T
Q  280 c 280  Q
    |    
T  7641509 c 7641509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 29267332 - 29267433
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgat--------aacttgacaacttaacctcttgactatgcaactt 213  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  29267332 agaatcacagctttaagcaatttcatgatttaactacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 29267431  T
Q  214 aa 215  Q
    ||    
T  29267432 aa 29267433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 15355759 - 15355668
Alignment:
Q  154 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 244  Q
    |||||||| ||||||||||| |||| || ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  15355759 acaacttatcaactcgacaatttgacaatcttgacaactcgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 15355668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1838117 - 1838071
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  1838117 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 1838071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12033745 - 12033699
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  12033745 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 12033699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14739663 - 14739617
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  14739663 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 14739617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15118966 - 15118920
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  15118966 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 15118920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29267211 - 29267257
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29267211 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 29267257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44614836 - 44614882
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  44614836 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 44614882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 50222953 - 50222907
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  50222953 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 50222907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18240033 - 18239987
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||    
T  18240033 atttaacaacataagcatcatcgatcatatttaacaactcatagaca 18239987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 14280196 - 14280232
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  14280196 tttgagcgtaaataggctcccagggcatcaagccctc 14280232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 15355645 - 15355609
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  15355645 tttgagcgtaaataggctcccagggcatcaagccctc 15355609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 20149712 - 20149748
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  20149712 tttgagcgtaaataggctcccagggcatcaagccctc 20149748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 15791428 - 15791474
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  15791428 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 15791474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 26045671 - 26045625
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  26045671 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 26045625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 26050852 - 26050806
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  26050852 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 26050806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 14280155 - 14280188
Alignment:
Q  247 gagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||    
T  14280155 gagcgtaaataggctcccagggcatcaagccctc 14280188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 1837828 - 1837792
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1837828 tttgagcgtaaaaaggctcccagggcatcaagccctc 1837792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 7641501 - 7641465
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  7641501 tttgagcgtaaaaaggctcccagggcatcaagccctc 7641465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 8575186 - 8575150
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||| |||||    
T  8575186 tttgagcgtaaataggctcccagggcatcaaaccctc 8575150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 15118671 - 15118635
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15118671 tttgagcgtaaaaaggctcccagggcatcaagccctc 15118635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 18215594 - 18215558
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||| ||||||||||||||||||||||||||||||    
T  18215594 tttgagggtaaataggctcccagggcatcaagccctc 18215558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 18239738 - 18239702
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  18239738 tttgagcgtaaaaaggctcccagggcatcaagccctc 18239702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 29267463 - 29267499
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29267463 tttgagcgtaaaaaggctcccagggcatcaagccctc 29267499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 32850970 - 32851036
Alignment:
Q  221 taatcatgcatgtggtaccaatct-------ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||    
T  32850970 taatcatgcatgtggtaccaatcaaatcatattgagcgtaaataggctcccagagcatcaagccctc 32851036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 44102094 - 44102130
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||| |||||||||||||||||    
T  44102094 tttgagcgtaaataggctctcagggcatcaagccctc 44102130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 44615131 - 44615167
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  44615131 tttgagcgtaaaaaggctcccagggcatcaagccctc 44615167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 50222658 - 50222622
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  50222658 tttgagcgtaaaaaggctcccagggcatcaagccctc 50222622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 52312310 - 52312346
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||| |||||||||||||    
T  52312310 tttgagcgtaaataggctcccagagcatcaagccctc 52312346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 52312353 - 52312389
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  52312353 tttgagcgtaaaaaggctcccagggcatcaagccctc 52312389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 54799030 - 54798994
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  54799030 tttgagcgtaaaaaggctcccagggcatcaagccctc 54798994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 54799074 - 54799038
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||| |||||    
T  54799074 tttgagcgtaaataggctcccagggcatcaaaccctc 54799038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 38106974 - 38107013
Alignment:
Q  8 aacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  38106974 aacataaacatcatcaatcatatttaacaactcatagaca 38107013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 12588 - 12554
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccc 278  Q
    |||||||||||| ||||||||||||||||||||||    
T  12588 tttgagcgtaaaaaggctcccagggcatcaagccc 12554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 15869238 - 15869177
Alignment:
Q  221 taatcatgcatgtggtaccaatc--tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||   ||||||||||||||||||  |  |||||||||||||    
T  15869238 taatcatgcatgtggtaccaatcatattgagcgtaaataggctcttatagcatcaagccctc 15869177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 20149671 - 20149704
Alignment:
Q  247 gagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||| ||||    
T  20149671 gagcgtaaataggctcccagggcatcaagtcctc 20149704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 15098938 - 15098982
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 241  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  15098938 cttgactatgcaacttcaacttcttaatcatgcatgtggtaccaa 15098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 18215637 - 18215602
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| ||||||||||||||||||    
T  18215637 tttgagcgtaaataggct-ccagggcatcaagccctc 18215602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 19736381 - 19736425
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 241  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||    
T  19736381 cttgactatgcaactacatcttcttaatcatgcatgtggtaccaa 19736425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 20416 - 20582
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  20416 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20515  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20516 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 20582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20295 - 20341
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20295 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 20341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 20590 - 20626
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20590 tttgagcgtaaaaaggctcccagggcatcaagccctc 20626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 138; Significance: 3e-72; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 94080 - 94246
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  94080 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 94179  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  94180 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 94246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 93959 - 94005
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  93959 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 94005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 94254 - 94290
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  94254 tttgagcgtaaaaaggctcccagggcatcaagccctc 94290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 44297 - 44332
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccct 279  Q
    |||||||||||| |||||||||||||||||||||||    
T  44297 tttgagcgtaaaaaggctcccagggcatcaagccct 44332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 44254 - 44290
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  44254 tttgagtgtaaataggctcccagggcatcaaggcctc 44290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 1484071 - 1484237
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  1484071 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 1484170  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1484171 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 1484237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 20402896 - 20403062
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  20402896 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20402995  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20402996 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 20403062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 125 - 280
Target Start/End: Original strand, 22001426 - 22001589
Alignment:
Q  125 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaat 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  22001426 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaat 22001525  T
Q  217 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22001526 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 22001589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 4542865 - 4542700
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  4542865 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 4542766  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4542765 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 4542700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 5853784 - 5853619
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  5853784 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 5853685  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5853684 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 5853619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 14823444 - 14823609
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  14823444 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 14823543  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14823544 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 14823609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 4482981 - 4483093
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  4482981 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 4483072  T
Q  222 aatcatgcatgtggtaccaat 242  Q
    |||||||||||||||||||||    
T  4483073 aatcatgcatgtggtaccaat 4483093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 20046597 - 20046478
Alignment:
Q  162 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 260  Q
    |||||| ||||| ||||| |||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20046597 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 20046498  T
Q  261 tcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||    
T  20046497 tcccagggcatcaagccctc 20046478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 18678517 - 18678390
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||    
T  18678517 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaactcgacaacttaacctcttgactatgcaactt 18678418  T
Q  214 aatcttctaatcatgcatgtggtaccaat 242  Q
    |  | ||| || |||||||||||||||||    
T  18678417 agacctcttat-atgcatgtggtaccaat 18678390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 18717706 - 18717579
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||    
T  18717706 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaactcgacaacttaacctcttgactatgcaactt 18717607  T
Q  214 aatcttctaatcatgcatgtggtaccaat 242  Q
    |  | ||| || |||||||||||||||||    
T  18717606 agacctcttat-atgcatgtggtaccaat 18717579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 26225725 - 26225636
Alignment:
Q  154 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaat 242  Q
    |||||||| |||||||||||||||| || ||||||||||  ||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  26225725 acaacttaccaactcgacaacttgacaatcttgacaactcgacaacttgacaatgcaacttaatcttctaatcatgcatgtggtaccaat 26225636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 26219445 - 26219534
Alignment:
Q  154 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaat 242  Q
    |||||||| | |||||||||||||| || ||||||||||  ||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  26219445 acaacttatccactcgacaacttgacaatcttgacaactcgacaacttgacaatgcaacttaatcttctaatcatgcatgtggtaccaat 26219534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1483950 - 1483996
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  1483950 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 1483996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4482860 - 4482906
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  4482860 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 4482906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4542986 - 4542940
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  4542986 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 4542940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5853905 - 5853859
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  5853905 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 5853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14823323 - 14823369
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  14823323 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 14823369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18678638 - 18678592
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  18678638 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 18678592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18717827 - 18717781
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  18717827 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 18717781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20402775 - 20402821
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20402775 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 20402821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22001309 - 22001355
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  22001309 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 22001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 15203593 - 15203557
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  15203593 tttgagcgtaaataggctcccagggcatcaagccctc 15203557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 26225611 - 26225575
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  26225611 tttgagcgtaaataggctcccagggcatcaagccctc 26225575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 45291058 - 45291022
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  45291058 tttgagcgtaaataggctcccagggcatcaagccctc 45291022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 18833248 - 18833283
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  18833248 ttgagcgtaaataggctcccagggcatcaagccctc 18833283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 37515270 - 37515313
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtacca 240  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  37515270 cttgactatgcaacttaatcttctaaatcatgcatgtggtacca 37515313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 18833179 - 18833225
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  18833179 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 18833225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 20502478 - 20502432
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  20502478 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 20502432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 22253541 - 22253495
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  22253541 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 22253495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 22963789 - 22963743
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22963789 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 22963743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 28397293 - 28397339
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28397293 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 28397339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 1484245 - 1484281
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1484245 tttgagcgtaaaaaggctcccagggcatcaagccctc 1484281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 4542692 - 4542656
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4542692 tttgagcgtaaaaaggctcccagggcatcaagccctc 4542656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 5853611 - 5853575
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  5853611 tttgagcgtaaaaaggctcccagggcatcaagccctc 5853575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 276
Target Start/End: Original strand, 19896065 - 19896097
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagc 276  Q
    |||||||||||||||||||||||||||||||||    
T  19896065 tttgagcgtaaataggctcccagggcatcaagc 19896097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 19896108 - 19896144
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19896108 tttgagcgtaaaaaggctcccagggcatcaagccctc 19896144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 20403070 - 20403106
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20403070 tttgagcgtaaaaaggctcccagggcatcaagccctc 20403106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 22001597 - 22001633
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  22001597 tttgagcgtaaaaaggctcccagggcatcaagccctc 22001633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 41598031 - 41598067
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||| |||||||||||||||||||||||||||||    
T  41598031 tttgagcataaataggctcccagggcatcaagccctc 41598067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 39937142 - 39937107
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  39937142 ttgagcgtaaataggctcgcagggcatcaagccctc 39937107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 22382110 - 22382064
Alignment:
Q  198 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||    
T  22382110 cttgactatgcaactttatcttcttaatcatgcatgtgttaccaatc 22382064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 22525302 - 22525348
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  22525302 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 22525348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 22984028 - 22984074
Alignment:
Q  198 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||    
T  22984028 cttgactatgcaacttaatcctcttaatcatgcatatggtaccaatc 22984074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 22995586 - 22995632
Alignment:
Q  198 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||    
T  22995586 cttgactatgcaacttaatcctcttaatcatgcatttggtaccaatc 22995632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 23667670 - 23667714
Alignment:
Q  199 ttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  23667670 ttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 23667714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 14823617 - 14823653
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  14823617 tttgagcgtaaaaaggctccaagggcatcaagccctc 14823653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 15203550 - 15203514
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  15203550 tttgagcgtaaaaaggctcccaaggcatcaagccctc 15203514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 18833290 - 18833326
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||| |||||||    
T  18833290 tttgagcgtaaataggctaccagggcatccagccctc 18833326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 26219559 - 26219595
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||| |||||| |||||||||||||||||||||||    
T  26219559 tttgagtgtaaatgggctcccagggcatcaagccctc 26219595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 41597988 - 41598024
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  41597988 tttgagcataaataggctcccatggcatcaagccctc 41598024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 134; Significance: 8e-70; HSPs: 3)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 13061 - 13227
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  13061 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 13160  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13161 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctc 13227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12940 - 12986
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  12940 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 12986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 13235 - 13271
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  13235 tttgagcgtaaaaaggctcctagggcatcaagccctc 13271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 134; Significance: 8e-70; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 9418 - 9584
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||    
T  9418 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttgacaacttaacctcttgactatgcaactt 9517  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9518 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 9584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9297 - 9343
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  9297 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 9343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 9591 - 9627
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  9591 tttgagcgtaaataggctcccagggcatcaagccctc 9627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 130; Significance: 2e-67; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 40070 - 40235
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  40070 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 40169  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40170 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 40235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39949 - 39995
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  39949 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 39995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 40243 - 40279
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40243 tttgagcgtaaaaaggctcccagggcatcaagccctc 40279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 130; Significance: 2e-67; HSPs: 15)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 136350 - 136515
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  136350 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 136449  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  136450 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 136515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 138819 - 138984
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  138819 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 138918  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  138919 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 138984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 143757 - 143922
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  143757 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 143856  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  143857 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 143922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 133881 - 134046
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  133881 agaatcacagctttaaacaatttcatgatttcacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 133980  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  133981 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 134046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 141288 - 141453
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  141288 agaatcacagctttaaacaatttcatgatttcacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 141387  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  141388 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctc 141453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 133760 - 133806
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  133760 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 133806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 136229 - 136275
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  136229 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 136275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 138698 - 138744
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  138698 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 138744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 141167 - 141213
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  141167 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 141213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 143636 - 143682
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  143636 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 143682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 134058 - 134090
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||| ||||||||||||||||||||||||    
T  134058 agcgtaaaaaggctcccagggcatcaagccctc 134090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 136523 - 136559
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| |||||| |||||||||||||||||    
T  136523 tttgagcgtaaaaaggctctcagggcatcaagccctc 136559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 138992 - 139028
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| |||||| |||||||||||||||||    
T  138992 tttgagcgtaaaaaggctctcagggcatcaagccctc 139028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 141461 - 141497
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| |||||| |||||||||||||||||    
T  141461 tttgagcgtaaaaaggctctcagggcatcaagccctc 141497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 143930 - 143966
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| |||||| |||||||||||||||||    
T  143930 tttgagcgtaaaaaggctctcagggcatcaagccctc 143966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 126; Significance: 5e-65; HSPs: 3)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 37491 - 37656
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  37491 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 37590  T
Q  214 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  37591 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccaaggcatcaagccctc 37656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37370 - 37416
Alignment:
Q  1 atttaacaacataagcatcatcaatcatatttaacaactcacagaca 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  37370 atttaacaacataagcatcatcaatcatatttaacaactcatagaca 37416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 37664 - 37700
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  37664 tttgagcgtaaaaaggctcccagggcatcaagccctc 37700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 158924 - 158795
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
T  158924 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactcgacaacttaacctcttgactatgcaactt 158825  T
Q  214 aatcttctaatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||||||||||||||||    
T  158824 aatcttctaatcatgcatgtggtaccaatc 158795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 158770 - 158734
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||| ||||||||||||||    
T  158770 tttgagcgtaaataggctcccaaggcatcaagccctc 158734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 4393 - 4553
Alignment:
Q  122 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 221  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||  |||||| |||||||||||||||||    
T  4393 agaatcacaactttaaaaaatttcatgatttaactacttaacaactcgacaacttgacaacttgataacttgacaacttgacaatgcaacttaatcttct 4492  T
Q  222 aatcatgcatgtggtaccaatc--tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||| |   |||||||||||||||||| ||| |||| ||||||||    
T  4493 aatcatgcatgtggtaccaaccatattgagcgtaaataggctctcagagcattaagccctc 4553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 116154 - 116236
Alignment:
Q  162 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 243  Q
    |||||| ||||| ||||| ||||  ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  116154 acaacttgacaatcttgacaactcaacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 116236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 116265 - 116301
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  116265 tttgagcgtaaataggctcccagggcatcaagccctc 116301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 116309 - 116343
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccc 278  Q
    |||||||||||| ||||||||||||||||||||||    
T  116309 tttgagcgtaaaaaggctcccagggcatcaagccc 116343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 9677 - 9738
Alignment:
Q  221 taatcatgcatgtggtaccaatctt--tgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||| |  ||||||||||||||||| ||| |||||||||||||    
T  9677 taatcatgcatgtggtaccaatcatattgagcgtaaataggctctcagagcatcaagccctc 9738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 8824 - 8767
Alignment:
Q  221 taatcatgcatgtggtaccaatctt--tgagcgtaaataggctcccagggcatcaagc 276  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||||    
T  8824 taatcatgcatgtggtaccaatcatattgagcgtaaataggctcccagagcatcaagc 8767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 52286 - 52250
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  52286 tttgagcgtaaataggctcccagggcatcaagccctc 52250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 16664 - 16700
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  16664 tttgagcgtaaataggctcccagggcatcaagccctc 16700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 277
Target Start/End: Original strand, 16577 - 16610
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagcc 277  Q
    ||||||||||||||||||||||||||||||||||    
T  16577 tttgagcgtaaataggctcccagggcatcaagcc 16610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 16620 - 16656
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||| |||||||||||||||||||||||||||||    
T  16620 tttgagcataaataggctcccagggcatcaagccctc 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 15514 - 15478
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  15514 tttgagcgtaaataggctcccagggcatcaagccctc 15478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 30137 - 30173
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  30137 tttgagcgtaaataggctcccagggcatcaagccctc 30173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 30181 - 30217
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||||||||||||    
T  30181 tttgagcgtaaaaaggctcccagggcatcaagccctc 30217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 3041 - 2995
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  3041 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 2995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 9915 - 9961
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  9915 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 9961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 1637 - 1683
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  1637 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 1683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 8633 - 8679
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  8633 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 8679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 17247 - 17293
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  17247 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 17293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 45027 - 44993
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccc 278  Q
    |||||||||||||||||||||||||||||||||||    
T  45027 tttgagcgtaaataggctcccagggcatcaagccc 44993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 44983 - 44947
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  44983 tttgagcgtaaaaaggctcccagggcattaagccctc 44947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 10882 - 10928
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  10882 cttgactatgcaacttcatcttcttaatcatgcatgtggtaccaatc 10928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 104006 - 103962
Alignment:
Q  198 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||    
T  104006 cttgactatgcaacttaatcctcttat-atgcatgtggtaccaatc 103962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 38492 - 38446
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  38492 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 38446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 6758 - 6804
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  6758 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 6804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 394 - 436
Alignment:
Q  202 actatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  394 actatgcaacttattcttcttaatcatgcatgtggtaccaatc 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 497206 - 497252
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  497206 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 497252  T

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Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 76629 - 76662
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccc 278  Q
    |||||||||||||||||| |||||||||||||||    
T  76629 ttgagcgtaaataggctcacagggcatcaagccc 76662  T

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Target: scaffold0101 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 280
Target Start/End: Complemental strand, 1557 - 1524
Alignment:
Q  247 gagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||||||||||||||||||||||    
T  1557 gagcgtaaataggctcccagggcatcaagccctc 1524  T

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Target: scaffold0697 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 6406 - 6438
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||||||||||||    
T  6406 agcgtaaataggctcccagggcatcaagccctc 6438  T

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Target: scaffold0697; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 277
Target Start/End: Original strand, 6445 - 6478
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagcc 277  Q
    |||||||||||| |||||||||||||||||||||    
T  6445 tttgagcgtaaaaaggctcccagggcatcaagcc 6478  T

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Target: scaffold0235 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 13151 - 13217
Alignment:
Q  221 taatcatgcatgtggtaccaatct-------ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||    
T  13151 taatcatgcatgtggtaccaatcaaatcatattgagcgtaaataggctcccagagcatcaagccctc 13217  T

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Target: scaffold0235; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 24853 - 24919
Alignment:
Q  221 taatcatgcatgtggtaccaatct-------ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||    
T  24853 taatcatgcatgtggtaccaatcaaatcatattgagcgtaaataggctcccagagcatcaagccctc 24919  T

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Target: scaffold0737 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 6778 - 6743
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  6778 ttgagcgtaaataggctcacagggcatcaagccctc 6743  T

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Target: scaffold0737; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 6820 - 6786
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccct 279  Q
    |||||||||||||||||| ||||||||||||||||    
T  6820 ttgagcgtaaataggctcacagggcatcaagccct 6786  T

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Target: scaffold0375 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 9434 - 9399
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  9434 ttgagcgtaaataggctcacagggcatcaagccctc 9399  T

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Target: scaffold0371 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 2803 - 2838
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  2803 ttgagcgtaaataggctcacagggcatcaagccctc 2838  T

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Target: scaffold0282 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 12049 - 12002
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatct 244  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  12049 cttgactatgcaactttatcttcttaatcatgcacgtggtaccaatct 12002  T

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Target: scaffold0111 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 7234 - 7269
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  7234 ttgagcgtaaataggctcacagggcatcaagccctc 7269  T

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Target: scaffold0111; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 14353 - 14388
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  14353 ttgagcgtaaataggctcacagggcatcaagccctc 14388  T

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Target: scaffold0111; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 14421 - 14453
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  14421 agcgtaaataggctcacagggcatcaagccctc 14453  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 57720 - 57755
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  57720 ttgagcgtaaataggctcacagggcatcaagccctc 57755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 19551 - 19516
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  19551 ttgagcgtaaataggctcacagggcatcaagccctc 19516  T

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Target: scaffold0058 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 745 - 710
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||| |||||||||||||||||||||||||||||    
T  745 ttgagcataaataggctcccagggcatcaagccctc 710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 816 - 769
Alignment:
Q  198 cttgactatgcaacttaatcttc--taatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||| ||||||  |||||||||| ||||||||||||    
T  816 cttgactatgcaactttatcttccttaatcatgcaagtggtaccaatc 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 78006 - 78041
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  78006 ttgagcgtaaataggctcacagggcatcaagccctc 78041  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 78484 - 78449
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| |||||||||||||||||    
T  78484 ttgagcgtaaataggctcacagggcatcaagccctc 78449  T

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Target: scaffold0914 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 1444 - 1490
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  1444 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 2149 - 2195
Alignment:
Q  198 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||    
T  2149 cttgactatgcaacttaatcctcttaatcatgcatgtggtagcaatc 2195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 10850 - 10805
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  10850 cttgactatgcaacttaa-cttcttaatcatgcatgtggtaccaatc 10805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 106064 - 106110
Alignment:
Q  198 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  106064 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 106110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 274
Target Start/End: Complemental strand, 7974 - 7945
Alignment:
Q  245 ttgagcgtaaataggctcccagggcatcaa 274  Q
    ||||||||||||||||||||||||||||||    
T  7974 ttgagcgtaaataggctcccagggcatcaa 7945  T

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Target: scaffold0413 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 12314 - 12358
Alignment:
Q  198 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||    
T  12314 cttgactatgcaacttaatcctcttat-atgcatgtggtaccaatc 12358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 136759 - 136715
Alignment:
Q  198 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 243  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||    
T  136759 cttgactatgcaacttaatcctcttat-atgcatgtggtaccaatc 136715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 1321 - 1353
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  1321 agcgtaaataggctcacagggcatcaagccctc 1353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 1362 - 1394
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  1362 agcgtaaataggctcacagggcatcaagccctc 1394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 4052 - 4087
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||| ||||||||||||||||||    
T  4052 tttgagcgtaaataggct-ccagggcatcaagccctc 4087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 11863 - 11899
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    |||||||||||||||||||||| |||| |||||||||    
T  11863 tttgagcgtaaataggctcccaaggcaacaagccctc 11899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 11906 - 11942
Alignment:
Q  244 tttgagcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  11906 tttgagcgtaaatagactcccagggaatcaagccctc 11942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 145733 - 145765
Alignment:
Q  248 agcgtaaataggctcccagggcatcaagccctc 280  Q
    ||||||||||||||| |||||||||||||||||    
T  145733 agcgtaaataggctcacagggcatcaagccctc 145765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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