View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7231_low_26 (Length: 239)
Name: NF7231_low_26
Description: NF7231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7231_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 51558129 - 51558359
Alignment:
| Q |
1 |
ataatgttgagttttggcagtctctttgcattttgtgataacgatagtttgttacagggttgattgtgtagctaagttagaatgatctagatgagatcct |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51558129 |
ataatgttgagttttggcagtctctttgcattttgtgataacgatagtttgttgcagggttgattgtgtagctaagttagaatgatctagatgagatcct |
51558228 |
T |
|
| Q |
101 |
ctttcccctctctgtcatggtttatcttcatcttagctctaaggtaacataattatggttcaggtgcatggttattgattgtaagaagtttgagtgtggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51558229 |
ctttcccctctctgtcatggtttatcttcatcttagctctaaggtaacataattatggttcaggtgcatggttattgattgtaagaagtttgagtgtggt |
51558328 |
T |
|
| Q |
201 |
gataaaggtaacaactgtgtttgttgatgtc |
231 |
Q |
| |
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||||||||||||||||||||||| ||||||| |
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| T |
51558329 |
gataaaggtaacaactgtgtttggtgatgtc |
51558359 |
T |
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