View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7236_low_14 (Length: 261)

Name: NF7236_low_14
Description: NF7236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7236_low_14
NF7236_low_14
[»] chr3 (43 HSPs)
chr3 (1-173)||(38579067-38579236)
chr3 (172-243)||(6097569-6097640)
chr3 (172-243)||(30947796-30947867)
chr3 (174-243)||(3475294-3475363)
chr3 (174-243)||(9595867-9595936)
chr3 (174-243)||(19284781-19284850)
chr3 (174-243)||(19384376-19384445)
chr3 (174-243)||(54379272-54379341)
chr3 (172-243)||(26662423-26662494)
chr3 (173-243)||(9106377-9106447)
chr3 (173-243)||(10986462-10986532)
chr3 (173-243)||(2941812-2941882)
chr3 (172-238)||(46237643-46237709)
chr3 (181-243)||(50755172-50755234)
chr3 (174-243)||(26960736-26960805)
chr3 (174-243)||(33413899-33413969)
chr3 (174-243)||(51361518-51361587)
chr3 (172-227)||(8719133-8719188)
chr3 (172-227)||(9071020-9071075)
chr3 (174-221)||(34562394-34562441)
chr3 (174-221)||(41191404-41191451)
chr3 (173-243)||(47335142-47335217)
chr3 (181-221)||(8718108-8718148)
chr3 (181-221)||(9069995-9070035)
chr3 (200-243)||(31853166-31853209)
chr3 (180-221)||(19012564-19012605)
chr3 (174-219)||(40220788-40220833)
chr3 (181-213)||(7045326-7045358)
chr3 (177-213)||(17620734-17620770)
chr3 (174-221)||(16276664-16276711)
chr3 (180-211)||(16653498-16653529)
chr3 (180-211)||(19012393-19012424)
chr3 (181-220)||(19385334-19385373)
chr3 (180-223)||(47729256-47729299)
chr3 (181-220)||(51362457-51362496)
chr3 (181-223)||(27446213-27446255)
chr3 (181-211)||(49053227-49053257)
chr3 (180-221)||(8036801-8036842)
chr3 (174-219)||(8054963-8055008)
chr3 (180-221)||(36185907-36185948)
chr3 (180-221)||(50416481-50416522)
chr3 (180-221)||(50416566-50416607)
chr3 (181-221)||(47924368-47924408)
[»] chr1 (39 HSPs)
chr1 (1-173)||(33376746-33376908)
chr1 (173-243)||(48762217-48762287)
chr1 (174-243)||(6314226-6314295)
chr1 (174-243)||(23817420-23817489)
chr1 (174-243)||(24636036-24636105)
chr1 (172-243)||(16976065-16976136)
chr1 (172-243)||(19897645-19897716)
chr1 (177-243)||(49936827-49936893)
chr1 (174-243)||(11422550-11422619)
chr1 (174-243)||(43452652-43452721)
chr1 (180-243)||(23174403-23174466)
chr1 (173-251)||(21641588-21641666)
chr1 (174-243)||(20434609-20434678)
chr1 (174-252)||(23920966-23921044)
chr1 (174-243)||(18618945-18619013)
chr1 (174-243)||(25888916-25888984)
chr1 (174-243)||(180833-180902)
chr1 (174-243)||(4097105-4097173)
chr1 (172-225)||(31084400-31084453)
chr1 (180-224)||(12070609-12070653)
chr1 (174-221)||(21255835-21255882)
chr1 (180-221)||(31763975-31764016)
chr1 (180-221)||(32595105-32595146)
chr1 (202-243)||(50351913-50351954)
chr1 (173-221)||(17893066-17893114)
chr1 (180-223)||(1395351-1395394)
chr1 (180-223)||(10974634-10974677)
chr1 (180-223)||(14229173-14229216)
chr1 (180-223)||(17893273-17893316)
chr1 (181-220)||(18056791-18056830)
chr1 (174-221)||(18057811-18057858)
chr1 (182-221)||(45849311-45849350)
chr1 (174-225)||(45890591-45890642)
chr1 (173-211)||(32595295-32595333)
chr1 (180-221)||(9628601-9628642)
chr1 (180-221)||(33156993-33157034)
chr1 (180-221)||(42134135-42134176)
chr1 (183-220)||(45889605-45889642)
chr1 (203-243)||(34370497-34370537)
[»] chr8 (40 HSPs)
chr8 (173-243)||(15227140-15227210)
chr8 (174-243)||(1149910-1149979)
chr8 (173-243)||(4835512-4835582)
chr8 (174-243)||(30414024-30414093)
chr8 (174-243)||(34633208-34633277)
chr8 (172-243)||(10237464-10237535)
chr8 (180-243)||(39657709-39657772)
chr8 (182-243)||(1209766-1209827)
chr8 (174-243)||(41451215-41451284)
chr8 (180-243)||(7059145-7059208)
chr8 (174-252)||(2751206-2751284)
chr8 (174-243)||(41099292-41099364)
chr8 (174-243)||(19784381-19784450)
chr8 (190-243)||(4840974-4841027)
chr8 (174-221)||(35301624-35301671)
chr8 (174-227)||(15259850-15259903)
chr8 (180-221)||(23567645-23567686)
chr8 (173-221)||(23397445-23397493)
chr8 (177-213)||(34647169-34647205)
chr8 (177-225)||(40022386-40022434)
chr8 (181-220)||(1208716-1208755)
chr8 (181-220)||(7058121-7058160)
chr8 (180-223)||(15809840-15809883)
chr8 (181-220)||(32987464-32987503)
chr8 (180-223)||(34343250-34343293)
chr8 (180-223)||(34343451-34343494)
chr8 (181-220)||(39021982-39022021)
chr8 (174-213)||(39023009-39023048)
chr8 (173-219)||(17232881-17232926)
chr8 (171-221)||(17792894-17792944)
chr8 (181-219)||(42433708-42433746)
chr8 (178-223)||(185880-185925)
chr8 (178-223)||(205046-205091)
chr8 (178-223)||(319883-319928)
chr8 (180-221)||(35448612-35448653)
chr8 (174-219)||(42434566-42434611)
chr8 (181-221)||(1672933-1672973)
chr8 (173-221)||(9853258-9853306)
chr8 (181-217)||(18161290-18161326)
chr8 (181-221)||(27506708-27506748)
[»] chr2 (26 HSPs)
chr2 (173-243)||(1292065-1292135)
chr2 (172-243)||(15016451-15016522)
chr2 (174-243)||(7487141-7487210)
chr2 (174-243)||(39355145-39355214)
chr2 (172-243)||(18297161-18297232)
chr2 (174-243)||(8149941-8150010)
chr2 (174-243)||(8154565-8154634)
chr2 (176-243)||(34464821-34464888)
chr2 (174-225)||(41345082-41345133)
chr2 (199-243)||(18762947-18762991)
chr2 (180-243)||(25193971-25194034)
chr2 (180-221)||(20194029-20194070)
chr2 (204-243)||(2264634-2264673)
chr2 (180-221)||(34726798-34726839)
chr2 (181-220)||(18298130-18298169)
chr2 (180-223)||(24183597-24183640)
chr2 (181-220)||(25192899-25192938)
chr2 (188-227)||(25996085-25996124)
chr2 (181-223)||(19246664-19246706)
chr2 (181-210)||(14551347-14551376)
chr2 (180-221)||(20661397-20661438)
chr2 (180-221)||(31783794-31783835)
chr2 (180-221)||(34726605-34726646)
chr2 (180-221)||(44915493-44915534)
chr2 (215-243)||(9143695-9143723)
chr2 (182-222)||(16111516-16111556)
[»] chr4 (52 HSPs)
chr4 (172-243)||(11786084-11786155)
chr4 (172-243)||(11798251-11798322)
chr4 (172-243)||(49425942-49426013)
chr4 (174-243)||(53441430-53441499)
chr4 (172-243)||(13635610-13635681)
chr4 (173-243)||(45256875-45256945)
chr4 (174-243)||(10473628-10473697)
chr4 (174-243)||(15051023-15051092)
chr4 (178-243)||(30597809-30597874)
chr4 (174-243)||(49492399-49492468)
chr4 (176-241)||(50644652-50644717)
chr4 (175-243)||(26577257-26577325)
chr4 (173-243)||(46672548-46672618)
chr4 (182-243)||(638974-639035)
chr4 (174-243)||(27865624-27865693)
chr4 (180-243)||(51836328-51836391)
chr4 (188-243)||(51921166-51921221)
chr4 (171-221)||(30358839-30358889)
chr4 (190-243)||(35291451-35291504)
chr4 (180-221)||(4169430-4169471)
chr4 (174-221)||(1728620-1728667)
chr4 (174-221)||(22180201-22180248)
chr4 (171-221)||(25715635-25715685)
chr4 (180-221)||(2124547-2124588)
chr4 (180-221)||(12722940-12722981)
chr4 (180-224)||(53526451-53526495)
chr4 (180-223)||(2124345-2124388)
chr4 (180-223)||(6841822-6841865)
chr4 (181-220)||(22181264-22181303)
chr4 (181-220)||(27764247-27764286)
chr4 (180-223)||(31763108-31763151)
chr4 (181-220)||(36621720-36621759)
chr4 (181-220)||(45255982-45256021)
chr4 (172-219)||(50070712-50070759)
chr4 (181-220)||(50643750-50643789)
chr4 (178-221)||(54895585-54895628)
chr4 (180-221)||(1492673-1492714)
chr4 (180-221)||(8165763-8165804)
chr4 (182-223)||(8242613-8242654)
chr4 (180-221)||(17109920-17109961)
chr4 (180-221)||(21995671-21995712)
chr4 (180-221)||(30779344-30779385)
chr4 (180-221)||(33819692-33819733)
chr4 (180-221)||(36924242-36924283)
chr4 (180-221)||(37059712-37059753)
chr4 (180-209)||(47219293-47219322)
chr4 (180-221)||(53865245-53865286)
chr4 (174-219)||(55782641-55782686)
chr4 (174-219)||(55846821-55846866)
chr4 (181-221)||(8157291-8157331)
chr4 (175-219)||(14499247-14499291)
chr4 (184-220)||(26447431-26447467)
[»] chr7 (30 HSPs)
chr7 (173-243)||(35737058-35737128)
chr7 (174-243)||(41910999-41911068)
chr7 (174-243)||(46358630-46358699)
chr7 (174-243)||(47340257-47340326)
chr7 (173-243)||(763807-763877)
chr7 (174-243)||(30884109-30884178)
chr7 (174-243)||(31660179-31660248)
chr7 (176-243)||(16933132-16933199)
chr7 (176-243)||(16938515-16938582)
chr7 (172-243)||(46572567-46572638)
chr7 (180-243)||(48692030-48692093)
chr7 (174-243)||(32685839-32685908)
chr7 (175-243)||(15973856-15973924)
chr7 (174-225)||(48830597-48830648)
chr7 (173-221)||(33798735-33798783)
chr7 (174-228)||(34228600-34228654)
chr7 (172-221)||(11732035-11732084)
chr7 (174-221)||(24360757-24360804)
chr7 (180-223)||(34227876-34227919)
chr7 (175-221)||(46025062-46025108)
chr7 (171-243)||(48306333-48306401)
chr7 (172-219)||(12286723-12286770)
chr7 (181-220)||(15974955-15974994)
chr7 (180-211)||(26945515-26945546)
chr7 (181-220)||(30428880-30428919)
chr7 (180-223)||(46004535-46004578)
chr7 (171-221)||(44426590-44426640)
chr7 (180-221)||(5728882-5728923)
chr7 (180-221)||(26945716-26945757)
chr7 (180-221)||(38837731-38837772)
[»] scaffold0074 (2 HSPs)
scaffold0074 (174-243)||(24384-24453)
scaffold0074 (174-211)||(44777-44814)
[»] chr6 (27 HSPs)
chr6 (174-243)||(6900913-6900982)
chr6 (174-243)||(15493284-15493353)
chr6 (172-243)||(7089192-7089263)
chr6 (173-243)||(31216772-31216842)
chr6 (174-243)||(34869950-34870019)
chr6 (174-243)||(1449652-1449721)
chr6 (173-243)||(878370-878440)
chr6 (174-225)||(7765402-7765453)
chr6 (178-223)||(20522848-20522893)
chr6 (180-223)||(25119107-25119150)
chr6 (180-221)||(14237779-14237820)
chr6 (174-219)||(18755658-18755703)
chr6 (176-221)||(30909441-30909486)
chr6 (181-221)||(15034993-15035033)
chr6 (180-223)||(10588953-10588996)
chr6 (181-220)||(12394399-12394438)
chr6 (188-227)||(18612358-18612397)
chr6 (180-223)||(22857489-22857532)
chr6 (181-220)||(33346390-33346429)
chr6 (181-220)||(34399648-34399687)
chr6 (188-222)||(29163718-29163752)
chr6 (180-221)||(19284372-19284413)
chr6 (178-223)||(20522668-20522713)
chr6 (180-209)||(21384790-21384819)
chr6 (180-221)||(21384991-21385032)
chr6 (202-238)||(33345359-33345395)
chr6 (202-238)||(35121503-35121539)
[»] chr5 (30 HSPs)
chr5 (174-243)||(14394578-14394647)
chr5 (174-243)||(14940243-14940312)
chr5 (174-243)||(26637724-26637793)
chr5 (174-243)||(3883922-3883991)
chr5 (174-243)||(37456790-37456859)
chr5 (174-243)||(15416774-15416843)
chr5 (174-243)||(28069242-28069311)
chr5 (174-243)||(30783568-30783636)
chr5 (174-243)||(13553093-13553162)
chr5 (180-223)||(5411756-5411799)
chr5 (180-223)||(11660794-11660837)
chr5 (172-223)||(23155518-23155569)
chr5 (172-221)||(23334704-23334752)
chr5 (202-243)||(34330166-34330207)
chr5 (180-221)||(35662068-35662109)
chr5 (173-213)||(23948591-23948631)
chr5 (181-220)||(13362777-13362816)
chr5 (180-223)||(15559050-15559093)
chr5 (181-220)||(25017236-25017275)
chr5 (181-220)||(28070172-28070211)
chr5 (178-221)||(39166150-39166193)
chr5 (180-222)||(3340591-3340633)
chr5 (175-221)||(13363796-13363842)
chr5 (173-219)||(25189816-25189862)
chr5 (180-210)||(36864068-36864098)
chr5 (180-221)||(11660984-11661025)
chr5 (180-221)||(22695542-22695583)
chr5 (178-223)||(25671288-25671333)
chr5 (180-221)||(35662235-35662276)
chr5 (180-221)||(39861782-39861823)
[»] scaffold0571 (1 HSPs)
scaffold0571 (173-243)||(539-609)
[»] scaffold0045 (1 HSPs)
scaffold0045 (173-243)||(33794-33864)
[»] scaffold0338 (1 HSPs)
scaffold0338 (181-243)||(6493-6555)
[»] scaffold0129 (1 HSPs)
scaffold0129 (171-223)||(20120-20172)
[»] scaffold0238 (1 HSPs)
scaffold0238 (181-220)||(25251-25290)
[»] scaffold0102 (2 HSPs)
scaffold0102 (180-211)||(33828-33859)
scaffold0102 (180-221)||(33617-33658)
[»] scaffold0050 (1 HSPs)
scaffold0050 (176-219)||(20974-21017)
[»] scaffold0581 (1 HSPs)
scaffold0581 (202-243)||(8336-8377)
[»] scaffold0516 (1 HSPs)
scaffold0516 (180-221)||(1250-1291)
[»] scaffold0249 (1 HSPs)
scaffold0249 (180-221)||(23545-23586)
[»] scaffold0221 (1 HSPs)
scaffold0221 (174-219)||(20479-20524)
[»] scaffold0126 (1 HSPs)
scaffold0126 (180-221)||(37634-37675)
[»] scaffold0194 (1 HSPs)
scaffold0194 (173-213)||(28685-28725)
[»] scaffold0009 (1 HSPs)
scaffold0009 (173-221)||(51899-51947)


Alignment Details
Target: chr3 (Bit Score: 151; Significance: 6e-80; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 38579236 - 38579067
Alignment:
Q  1 taatattgatttttaagtcaattgaatttcctatctgaatgcttttgttaacaattttatttaacaacaactcagtcaagcagtttgttaatccccggac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||    
T  38579236 taatattgatttctaagtcaattgaatttcctatctgaatgcttttgttaacaattttatttaacaac---tcagtcaagcagtttgttaatcccctgac 38579140  T
Q  101 ataaaaatggatccacacaaagaaatgtgactccttaaaacactcaatacgcatagagtggcatcacggtcac 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38579139 ataaaaatggatccacacaaagaaatgtgactccttaaaacactcaatacgcatagagtggcatcacggtcac 38579067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 6097569 - 6097640
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  6097569 acgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 6097640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 30947796 - 30947867
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  30947796 acgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 30947867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 3475294 - 3475363
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  3475294 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 3475363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 9595867 - 9595936
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  9595867 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 9595936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 19284850 - 19284781
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  19284850 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 19284781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 19384376 - 19384445
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19384376 gggagcggttatggtgcataaggaaattcttatgcaccgtgcataaatcccaacataattgcttcctaca 19384445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 54379341 - 54379272
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  54379341 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 54379272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 26662423 - 26662494
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||||||||||||    
T  26662423 acgggagtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctaca 26662494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 9106447 - 9106377
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||    
T  9106447 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctaca 9106377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 10986532 - 10986462
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  10986532 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctaca 10986462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 2941812 - 2941882
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| |||||    
T  2941812 cgggagtgattatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgctttctaca 2941882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 46237643 - 46237709
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttc 238  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||    
T  46237643 acgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttc 46237709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 50755234 - 50755172
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  50755234 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 50755172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 26960805 - 26960736
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||||| |||| ||||||||||||||||    
T  26960805 gggagtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaatataattgcttcctaca 26960736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 33413899 - 33413969
Alignment:
Q  174 gggagtggttatggtgcataaggaaattc-ttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| | ||||||||||| ||||||| |||| ||||||||||||||||    
T  33413899 gggagtggttatggtgcataaggaaatcccttatgcaccgtgcataaatcccaatataattgcttcctaca 33413969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 51361518 - 51361587
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||| ||||||||||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||    
T  51361518 gggagcggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaacataattgcttcctaca 51361587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 8719188 - 8719133
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaac 227  Q
    ||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  8719188 acgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 8719133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 9071075 - 9071020
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaac 227  Q
    ||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  9071075 acgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 9071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 34562394 - 34562441
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  34562394 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 34562441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 41191404 - 41191451
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  41191404 gggagtggttatggtgcatagggaaattcttatgcaccgtgcataaat 41191451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 47335217 - 47335142
Alignment:
Q  173 cgggagtggttatggtgcataaggaaa-----ttcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||     | |||||||||||| ||||||| |||||||||||| ||||||||    
T  47335217 cgggagtggttatggtgcataaggaaatcctttccttatgcaccgtgcataaatcccaacataattgtttcctaca 47335142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 8718108 - 8718148
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  8718108 gttatggtgcataaggaaatccttatgcaccgtacataaat 8718148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 9069995 - 9070035
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  9069995 gttatggtgcataaggaaatccttatgcaccgtacataaat 9070035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 31853209 - 31853166
Alignment:
Q  200 ttcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||| ||||||| |||||||||||||||||||||    
T  31853209 ttcttatgcaccgtgcataaatcccaacataattgcttcctaca 31853166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 19012605 - 19012564
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  19012605 ggttatggtgcataaggaaattcttatgcaccctgcataaat 19012564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 40220833 - 40220788
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    ||||||||||||||||||||||||  |||||||||||||| |||||    
T  40220833 gggagtggttatggtgcataaggattttcttatgcaccgtgcataa 40220788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 7045358 - 7045326
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgt 213  Q
    |||||||||||||||||||||||||||||||||    
T  7045358 gttatggtgcataaggaaattcttatgcaccgt 7045326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 17620734 - 17620770
Alignment:
Q  177 agtggttatggtgcataaggaaattcttatgcaccgt 213  Q
    |||||||||||||||||||||||| ||||||||||||    
T  17620734 agtggttatggtgcataaggaaatccttatgcaccgt 17620770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 16276664 - 16276711
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||| ||||||||||||||| ||||| |||||||||||| |||||||    
T  16276664 gggagcggttatggtgcataaagaaatccttatgcaccgtgcataaat 16276711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 211
Target Start/End: Original strand, 16653498 - 16653529
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcacc 211  Q
    ||||||||||||||||||||||||||||||||    
T  16653498 ggttatggtgcataaggaaattcttatgcacc 16653529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 211
Target Start/End: Original strand, 19012393 - 19012424
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcacc 211  Q
    ||||||||||||||||||||||||||||||||    
T  19012393 ggttatggtgcataaggaaattcttatgcacc 19012424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 19385373 - 19385334
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  19385373 gttatggtgcataaggaaatccttatgcaccgtgcataaa 19385334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 47729299 - 47729256
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||| |||||||||||||||| |||||||||| |||||||||||    
T  47729299 ggttttggtgcataaggaaatccttatgcaccctacataaattc 47729256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 51362496 - 51362457
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  51362496 gttatggtgcataaggaaatccttatgcaccgtgcataaa 51362457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 27446255 - 27446213
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||||||||||||||||||| |||||||||| | |||||||||    
T  27446255 gttatggtgcataaggaaatccttatgcaccttgcataaattc 27446213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 211
Target Start/End: Original strand, 49053227 - 49053257
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcacc 211  Q
    |||||||||||||||||||||||||||||||    
T  49053227 gttatggtgcataaggaaattcttatgcacc 49053257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 8036801 - 8036842
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  8036801 ggttatggtgcataaggaaatccttatgcaccctgcataaat 8036842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 8054963 - 8055008
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    ||||||||||||||||||||| ||  |||||||||||||| |||||    
T  8054963 gggagtggttatggtgcataaagattttcttatgcaccgtgcataa 8055008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 36185948 - 36185907
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  36185948 ggttatggtgcataaggaaatccttatgcaccctgcataaat 36185907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 50416481 - 50416522
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  50416481 ggttatggtgcataaggaaatccttatgcaccctgcataaat 50416522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 50416607 - 50416566
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  50416607 ggttatggtgcataaggaaatccttatgcaccctgcataaat 50416566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 47924408 - 47924368
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||| |||||||||| | |||||||    
T  47924408 gttatggtgcataaggaaatccttatgcaccctgcataaat 47924368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 33376908 - 33376746
Alignment:
Q  1 taatattgatttttaagtcaattgaatttcctatctgaatgcttttgttaacaattttatttaacaacaactcagtcaagcagtttgttaatccccggac 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||       ||||||||| ||||||||||||| ||| ||   ||||    
T  33376908 taatattgatttttaagtcaattgaatttcttatctgaatgcttttgttaacaatt-------acaacaactgagtcaagcagtttattagtc---ggac 33376819  T
Q  101 ataaaaatggatccacacaaagaaatgtgactccttaaaacactcaatacgcatagagtggcatcacggtcac 173  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  33376818 ataaaaatggatccatacaaagaaatatgactccttaaaacactcaatacgcatagagtggcatcacagtcac 33376746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 48762217 - 48762287
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  48762217 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 48762287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 6314295 - 6314226
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  6314295 gggagtggttatggtgcataaggaaatccttatgcaccgtatataaatcccaacataattgcttcctaca 6314226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 23817489 - 23817420
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  23817489 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 23817420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 24636105 - 24636036
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  24636105 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 24636036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 16976136 - 16976065
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  16976136 acgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctaca 16976065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 19897645 - 19897716
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||||    
T  19897645 acgggagtggttatggtgcataaggaaatccttatgcaccgtgcagaaatcccaacataattgcttcctaca 19897716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 49936827 - 49936893
Alignment:
Q  177 agtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  49936827 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 49936893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 11422619 - 11422550
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  11422619 gggagcggttatggtgcataaggaaatccttatgcatcgtgcataaattccaacataattgcttcctaca 11422550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 43452721 - 43452652
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||    
T  43452721 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgtttcctaca 43452652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 23174403 - 23174466
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  23174403 ggttatggtgcataagaaaattcttatgcaccgtgcataaatcccaacataattgcttcctaca 23174466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 21641588 - 21641666
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctacaacaccaaa 251  Q
    |||||| ||||||| ||||||||||||| |||||||||||| || |||| ||||||||||||||||||||| |||||||    
T  21641588 cgggagcggttatgctgcataaggaaatccttatgcaccgtgcacaaatcccaacataattgcttcctacaccaccaaa 21641666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 20434609 - 20434678
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||  ||||||||| | ||||||| |||||||||||||||||||||    
T  20434609 gggagtggttatggtgcataaggaaatcattatgcaccatgcataaatcccaacataattgcttcctaca 20434678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 23920966 - 23921044
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctacaacaccaaac 252  Q
    ||||| ||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||| |||||||| | ||||||    
T  23920966 gggagcggttatggtgcataaggaaatccttatgcatcgtgcataaatcccaacataattgtttcctacacccccaaac 23921044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 18619013 - 18618945
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||| |||||||||||||||||| | |||||||||||| ||||||| |||||||||||||||||||||    
T  18619013 gggagtagttatggtgcataaggaa-tccttatgcaccgtgcataaatcccaacataattgcttcctaca 18618945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 25888916 - 25888984
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||| | |||||||||||||||||||    
T  25888916 gggagtggttatggtgcataaggaa-tccttatgcaccgtgcataaatcctaacataattgcttcctaca 25888984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 180902 - 180833
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||| |||||||||| |||| ||||| ||||||||||||  |||||| |||||||||||||||||||||    
T  180902 gggagcggttatggtgtataaagaaatccttatgcaccgtgtataaatcccaacataattgcttcctaca 180833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 4097105 - 4097173
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||| ||||||||||||||||||| | |||||||||||| | ||||| |||||||||||||||||||||    
T  4097105 gggagcggttatggtgcataaggaa-tccttatgcaccgtgcttaaatcccaacataattgcttcctaca 4097173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 31084453 - 31084400
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattcca 225  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  31084453 acgggagtggttatggtgcataaggaaatccttatgtaccgtgcataaattcca 31084400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 12070653 - 12070609
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattcc 224  Q
    |||||||||||||||||||||||||||||||| | ||||||||||    
T  12070653 ggttatggtgcataaggaaattcttatgcaccctgcataaattcc 12070609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 21255835 - 21255882
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||    
T  21255835 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaat 21255882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 31764016 - 31763975
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  31764016 ggttatggtgcataaggaaatccttatgcaccctacataaat 31763975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 32595105 - 32595146
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  32595105 ggttatggtgcataaggaaattcttatgcaccctgcataaat 32595146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 50351954 - 50351913
Alignment:
Q  202 cttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  50351954 cttatgcaccgtgcataaatcccaacataattgcttcctaca 50351913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 17893066 - 17893114
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||| ||||||||||||||||||||||| |||||||||| | |||||||    
T  17893066 cgggcgtggttatggtgcataaggaaatccttatgcaccctgcataaat 17893114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 1395394 - 1395351
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  1395394 ggttatggtgcataaggaaatccttatgcaccatgcataaattc 1395351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 10974634 - 10974677
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  10974634 ggttatggtgcataaggaaatccttatgcaccctgcataaattc 10974677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 14229173 - 14229216
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  14229173 ggttatggtgcataaggaaatccttatgcaccctgcataaattc 14229216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 17893316 - 17893273
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  17893316 ggttatggtgcataaggaaatccttatgcaccctgcataaattc 17893273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 18056791 - 18056830
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  18056791 gttatggtgcataaggaaatccttatgcaccgtgcataaa 18056830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 18057858 - 18057811
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||| |||||||||| |||||||||| |||||||||||| |||||||    
T  18057858 gggagcggttatggtgtataaggaaatccttatgcaccgtgcataaat 18057811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 45849350 - 45849311
Alignment:
Q  182 ttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  45849350 ttatggtgcataaggaaattcttatgcaccctgcataaat 45849311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 45890642 - 45890591
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattcca 225  Q
    ||||| |||||||||| ||||| |||| |||||||||||| |||||||||||    
T  45890642 gggagcggttatggtgtataagaaaatccttatgcaccgtgcataaattcca 45890591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 32595333 - 32595295
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcacc 211  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  32595333 cgggcgtggttatggtgcataaggaaatccttatgcacc 32595295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 9628642 - 9628601
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  9628642 ggttatggtgcataaggaaatccttatgcaccctgcataaat 9628601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 33156993 - 33157034
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  33156993 ggttatggtgcataaggaaatccttatgcaccctgcataaat 33157034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 42134176 - 42134135
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  42134176 ggttatggtgcataaggaaatccttatgcaccctgcataaat 42134135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 45889605 - 45889642
Alignment:
Q  183 tatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  45889605 tatggtgcataaggaaattcttatccaccgtgcataaa 45889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 34370537 - 34370497
Alignment:
Q  203 ttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||| ||||||| | |||||||||||||||||||    
T  34370537 ttatgcaccgtgcataaatcctaacataattgcttcctaca 34370497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 15227210 - 15227140
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  15227210 cgggagtggttatggtgcataaggaaatccttatgcaccgtacataaatcccaacataattgcttcctaca 15227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 1149910 - 1149979
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  1149910 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctaca 1149979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 4835512 - 4835582
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  4835512 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 4835582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 30414093 - 30414024
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||    
T  30414093 gggagtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctaca 30414024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 34633208 - 34633277
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| ||||    
T  34633208 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcttaca 34633277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 10237535 - 10237464
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||| |||||    
T  10237535 acgggagtggttatggtgcataaggaaatccttatgcaccgtgtataaatcccaacataattgctttctaca 10237464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 39657709 - 39657772
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  39657709 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 39657772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 1209827 - 1209766
Alignment:
Q  182 ttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  1209827 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 1209766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 41451284 - 41451215
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||| |||||||||| ||||||||| || ||||||| |||||||||||||||||||||    
T  41451284 gggagtggttatggtgtataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctaca 41451215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 7059208 - 7059145
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||    
T  7059208 ggttatggtgcataaggaaatcattatgcaccgtgcataaattccaacataattgtttcctaca 7059145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 2751284 - 2751206
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctacaacaccaaac 252  Q
    ||||| |||||||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| | ||||||    
T  2751284 gggagcggttatggtgcataagaaaatccttatgcaccgtgcatgaatcccaacataattgcttcctacacccccaaac 2751206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 41099364 - 41099292
Alignment:
Q  174 gggagtggttatggtgcataaggaaatt---cttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||    |||||||||||| ||||||| |||||||||||||||||||||    
T  41099364 gggagtggttatggtgcataaggaaatcatccttatgcaccgtgcataaatcccaacataattgcttcctaca 41099292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 19784450 - 19784381
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||| ||||||||||||| ||||||||  || ||||||| |||||||||||||||||||||    
T  19784450 gggagtggttatgatgcataaggaaatccttatgcattgtgcataaatcccaacataattgcttcctaca 19784381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 4840974 - 4841027
Alignment:
Q  190 cataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  4840974 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 4841027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 35301624 - 35301671
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  35301624 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 35301671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 15259850 - 15259903
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaac 227  Q
    ||||| |||||||| |||||||||||| |||||||||||| ||||||| |||||    
T  15259850 gggagcggttatggggcataaggaaatccttatgcaccgtgcataaatcccaac 15259903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 23567686 - 23567645
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  23567686 ggttatggtgcataaggaaattcttatgcaccctgcataaat 23567645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 23397493 - 23397445
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||| |||||||||||||||||||||| |||||||||| | |||||||    
T  23397493 cgggaatggttatggtgcataaggaaatccttatgcaccatgcataaat 23397445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 34647169 - 34647205
Alignment:
Q  177 agtggttatggtgcataaggaaattcttatgcaccgt 213  Q
    |||||||||||||||||||||||| ||||||||||||    
T  34647169 agtggttatggtgcataaggaaatccttatgcaccgt 34647205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 40022386 - 40022434
Alignment:
Q  177 agtggttatggtgcataaggaaattcttatgcaccgtacataaattcca 225  Q
    |||||||||||||||||||||||| ||||||||| ||  ||||||||||    
T  40022386 agtggttatggtgcataaggaaatccttatgcactgtgtataaattcca 40022434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 1208716 - 1208755
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  1208716 gttatggtgcataaggaaatccttatgcaccgtgcataaa 1208755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 7058121 - 7058160
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  7058121 gttatggtgcataaggaaatacttatgcaccgtgcataaa 7058160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 15809883 - 15809840
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  15809883 ggttatggtgcataaggaaatccttatgcaccctccataaattc 15809840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 32987503 - 32987464
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  32987503 gttatggtgcataaggaaatccttatgcaccgtgcataaa 32987464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 34343250 - 34343293
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||||||||||||||||||||  ||||||||| |||||||||||    
T  34343250 ggttatggtgcataaggaaatctttatgcaccctacataaattc 34343293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 34343494 - 34343451
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||||||||||||||||||||| ||||||||| | |||||||||    
T  34343494 ggttatggtgcataaggaaattattatgcaccctgcataaattc 34343451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 39021982 - 39022021
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  39021982 gttatggtgcataaggaaatccttatgcaccgtgcataaa 39022021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 39023048 - 39023009
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgt 213  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  39023048 gggagcggttatggtgcataaggaaattcttatacaccgt 39023009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 17232926 - 17232881
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||    
T  17232926 cgggagtggttatggtgcataaggata-tcttatgcaccgtgcataa 17232881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 17792944 - 17792894
Alignment:
Q  171 cacgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||| | ||||||||||||||||||||| |||||||||| | |||||||    
T  17792944 cacgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaat 17792894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 42433708 - 42433746
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  42433708 gttatggtgcataaggaaatccttatgcaccgtgcataa 42433746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 185880 - 185925
Alignment:
Q  178 gtggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||||| |||||||||  | |||||||||    
T  185880 gtggttatggtgcataaggaaatccttatgcactctgcataaattc 185925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 205091 - 205046
Alignment:
Q  178 gtggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||| |||||||||||||||||| ||||| | |||||||||    
T  205091 gtggttatgatgcataaggaaattcttacgcaccctccataaattc 205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 319928 - 319883
Alignment:
Q  178 gtggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||| |||||||||||||||||| ||||| | |||||||||    
T  319928 gtggttatgatgcataaggaaattcttacgcaccctccataaattc 319883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 35448653 - 35448612
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  35448653 ggttatggtgcataaggaaatccttatgcaccctgcataaat 35448612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 42434611 - 42434566
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    ||||||||||||||||||||||||  | |||||||||||| |||||    
T  42434611 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 42434566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 1672973 - 1672933
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||| |||||||||| | |||||||    
T  1672973 gttatggtgcataaggaaatccttatgcaccctgcataaat 1672933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 9853306 - 9853258
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||||  |||| ||||||||| || |||||||    
T  9853306 cgggagtggttatggtgcataaaaaaatccttatgcactgtgcataaat 9853258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 18161290 - 18161326
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacat 217  Q
    |||||||||||||||||||| |||||||||| |||||    
T  18161290 gttatggtgcataaggaaatccttatgcaccctacat 18161326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 27506708 - 27506748
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||| |||||||||| | |||||||    
T  27506708 gttatggtgcataaggaaatccttatgcaccctgcataaat 27506748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 1292065 - 1292135
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  1292065 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctaca 1292135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 15016451 - 15016522
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  15016451 acgggagtggttatggtgcataaggaaattcttatgcaccgtgcataaatctcaacataattgcttcctaca 15016522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 7487141 - 7487210
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  7487141 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 7487210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 39355214 - 39355145
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  39355214 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 39355145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 18297161 - 18297232
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||| |||||||||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  18297161 acgggagcggttatggtgcatagggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 18297232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 8150010 - 8149941
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||| ||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||    
T  8150010 gggagtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctaca 8149941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 8154634 - 8154565
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||| ||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||    
T  8154634 gggagtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctaca 8154565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 34464888 - 34464821
Alignment:
Q  176 gagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  34464888 gagtggttatggtccataaggaaatccttatgcaccgtgcataaatccaaacataattgcttcctaca 34464821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 41345082 - 41345133
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattcca 225  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  41345082 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattcca 41345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 18762991 - 18762947
Alignment:
Q  199 attcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  18762991 attcttatgcaccgtacataaatcccaacataattgcttcctaca 18762947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 25194034 - 25193971
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||| ||||| |||||||||||| ||||||| |||| ||||||| ||||||||    
T  25194034 ggttatggtgcataatgaaatccttatgcaccgtgcataaatcccaatataattgtttcctaca 25193971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 20194070 - 20194029
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  20194070 ggttatggtgcataaggaaattcttatgcaccctacataaat 20194029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 2264673 - 2264634
Alignment:
Q  204 tatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  2264673 tatgcacagtacataaattccaacataattgcttcctaca 2264634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 34726839 - 34726798
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  34726839 ggttatggtgcataaggaaattcttatgcaccctgcataaat 34726798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 18298169 - 18298130
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  18298169 gttatggtgcataaggaaatccttatgcaccgtgcataaa 18298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 24183640 - 24183597
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  24183640 ggttatggtgcataaggaaatccttatgcaccctgcataaattc 24183597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 25192899 - 25192938
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  25192899 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25192938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 25996124 - 25996085
Alignment:
Q  188 tgcataaggaaattcttatgcaccgtacataaattccaac 227  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  25996124 tgcataaggaaattcttaagcaccgtgcataaattccaac 25996085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 19246664 - 19246706
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||||||||||||||||||| |||||||||| | |||||||||    
T  19246664 gttatggtgcataaggaaatccttatgcaccctgcataaattc 19246706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 14551376 - 14551347
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcac 210  Q
    ||||||||||||||||||||||||||||||    
T  14551376 gttatggtgcataaggaaattcttatgcac 14551347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 20661397 - 20661438
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  20661397 ggttatggtgcataaggaaatccttatgcaccctgcataaat 20661438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 31783794 - 31783835
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  31783794 ggttatggtgcataaggaaatccttatgcaccctgcataaat 31783835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 34726605 - 34726646
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  34726605 ggttatggtgcataaggaaatccttatgcaccctgcataaat 34726646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 44915534 - 44915493
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  44915534 ggttatggtgcataaggaaatgcttatgcaccctgcataaat 44915493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 243
Target Start/End: Complemental strand, 9143723 - 9143695
Alignment:
Q  215 cataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||||    
T  9143723 cataaattccaacataattgcttcctaca 9143695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 16111516 - 16111556
Alignment:
Q  182 ttatggtgcataaggaaattcttatgcaccgtacataaatt 222  Q
    |||||||||||||| ||||||||||||||| | ||||||||    
T  16111516 ttatggtgcataagaaaattcttatgcaccctgcataaatt 16111556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 11786155 - 11786084
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  11786155 acgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 11786084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 11798322 - 11798251
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  11798322 acgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 11798251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 49425942 - 49426013
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  49425942 acgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 49426013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 53441499 - 53441430
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  53441499 gggagtggttatggtgcataaggaaatccttatgcaccgggcataaattccaacataattgcttcctaca 53441430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 13635610 - 13635681
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  13635610 acggaagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 13635681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 45256945 - 45256875
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  45256945 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 45256875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 10473697 - 10473628
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  10473697 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacctaattgcttcctaca 10473628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 15051023 - 15051092
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  15051023 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctaca 15051092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 30597874 - 30597809
Alignment:
Q  178 gtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  30597874 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 30597809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 49492399 - 49492468
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  49492399 gggagtagttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 49492468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 50644717 - 50644652
Alignment:
Q  176 gagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttccta 241  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  50644717 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 50644652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 26577257 - 26577325
Alignment:
Q  175 ggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  26577257 ggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatttcaacataattgcttcctaca 26577325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 46672618 - 46672548
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  46672618 cgggagtggttatgttgcataaggaaattcttatgcatcgtgcataaatcccaacatgattgcttcctaca 46672548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 639035 - 638974
Alignment:
Q  182 ttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  639035 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 638974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 27865624 - 27865693
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||| |||||||||| |||||||||| | ||||||| |||||||||||||||||||||    
T  27865624 gggagtggttatggtgtataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctaca 27865693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 51836328 - 51836391
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||||||    
T  51836328 ggttatggtgcataaggaaatttttatgcatcgtgcataaatcccaacataattgcttcctaca 51836391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 51921166 - 51921221
Alignment:
Q  188 tgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  51921166 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 51921221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 30358889 - 30358839
Alignment:
Q  171 cacgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  30358889 cacgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 30358839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 35291451 - 35291504
Alignment:
Q  190 cataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  35291451 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 35291504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 4169471 - 4169430
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  4169471 ggttatggtgcataaggaaattcttatgcactgtacataaat 4169430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 1728620 - 1728667
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  1728620 gggagtggttatggtgcataagaaaattcttatgtaccgtgcataaat 1728667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 22180201 - 22180248
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  22180201 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaat 22180248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 25715635 - 25715685
Alignment:
Q  171 cacgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||| ||||||||||||||||||||||| |||||||||| | |||||||    
T  25715635 cacgggcgtggttatggtgcataaggaaatccttatgcaccctgcataaat 25715685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 2124588 - 2124547
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  2124588 ggttatggtgcataaggaaattcttatgcaccctgcataaat 2124547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 12722981 - 12722940
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  12722981 ggttatggtgcataaggaaattcttatgcaccctgcataaat 12722940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 53526495 - 53526451
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattcc 224  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||    
T  53526495 ggttatggtgcataaggaaattcttatgtaccctgcataaattcc 53526451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 2124345 - 2124388
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  2124345 ggttatggtgcataaggaaatccttatgcaccctgcataaattc 2124388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 6841822 - 6841865
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  6841822 ggttatggtgcataaggaaatccttatgcaccctgcataaattc 6841865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 22181303 - 22181264
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  22181303 gttatggtgcataaggaaatccttatgcaccgtgcataaa 22181264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 27764247 - 27764286
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  27764247 gttatggtgcataaggaaatccttatgcaccgtgcataaa 27764286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 31763151 - 31763108
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  31763151 ggttatggtgcataaggaaatccttatgcaccctgcataaattc 31763108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 36621759 - 36621720
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  36621759 gttatggtgcataaggaaatccttatgcaccgtgcataaa 36621720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 45255982 - 45256021
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  45255982 gttatggtgcataaggaaatccttatgcaccgtgcataaa 45256021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 50070712 - 50070759
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    ||||||||||||||||||||||||||  | |||||||||||| |||||    
T  50070712 acgggagtggttatggtgcataaggatttccttatgcaccgtgcataa 50070759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 50643750 - 50643789
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  50643750 gttatggtgcataaggaaatccttatgcaccgtgcataaa 50643789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 54895628 - 54895585
Alignment:
Q  178 gtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||||| |||||||||| | |||||||    
T  54895628 gtggttatggtgcataaggaaatccttatgcaccctgcataaat 54895585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 1492673 - 1492714
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  1492673 ggttatggtgcataaggaaatccttatgcaccctgcataaat 1492714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 8165763 - 8165804
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  8165763 ggttatggtgcataaggaaatccttatgcaccctgcataaat 8165804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 8242654 - 8242613
Alignment:
Q  182 ttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||||||||||||| |||| ||||| ||||||||||||||||    
T  8242654 ttatggtgcataagtaaatccttatacaccgtacataaattc 8242613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 17109961 - 17109920
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  17109961 ggttatggtgcataaggaaatccttatgcaccctgcataaat 17109920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 21995671 - 21995712
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  21995671 ggttatggtgcataaggaaatccttatgcaccctgcataaat 21995712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 30779344 - 30779385
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  30779344 ggttatggtgcataaggaaatccttatgcaccttgcataaat 30779385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 33819692 - 33819733
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  33819692 ggttatggtgcataaggaaatccttatgcaccctgcataaat 33819733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 36924242 - 36924283
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  36924242 ggttatggtgcataaggaaatccttatgcaccctgcataaat 36924283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 37059712 - 37059753
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  37059712 ggttatggtgcataaggaaatccttatgcaccttgcataaat 37059753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 209
Target Start/End: Complemental strand, 47219322 - 47219293
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgca 209  Q
    ||||||||||||||||||||||||||||||    
T  47219322 ggttatggtgcataaggaaattcttatgca 47219293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 53865286 - 53865245
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  53865286 ggttatggtgcataaggaaatccttatgcaccctgcataaat 53865245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 55782686 - 55782641
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    ||||||||||||||||||||||||  | |||||||||||| |||||    
T  55782686 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 55782641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 55846866 - 55846821
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    ||||||||||||||||||||||||  | |||||||||||| |||||    
T  55846866 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 55846821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 8157331 - 8157291
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||| |||||||||| | |||||||    
T  8157331 gttatggtgcataaggaaatccttatgcaccctgcataaat 8157291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 14499247 - 14499291
Alignment:
Q  175 ggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    |||||||||||||||||||||||  | |||||||||||| |||||    
T  14499247 ggagtggttatggtgcataaggatttccttatgcaccgtgcataa 14499291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 26447467 - 26447431
Alignment:
Q  184 atggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  26447467 atggtgcataaggaaatccttatgcaccgtgcataaa 26447431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 35737128 - 35737058
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  35737128 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 35737058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 41910999 - 41911068
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  41910999 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 41911068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 46358699 - 46358630
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  46358699 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 46358630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 47340326 - 47340257
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  47340326 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 47340257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 763877 - 763807
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||||||||||||    
T  763877 cgggagtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctaca 763807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 30884109 - 30884178
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  30884109 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctaca 30884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 31660248 - 31660179
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  31660248 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctaca 31660179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 16933132 - 16933199
Alignment:
Q  176 gagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  16933132 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctaca 16933199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 16938515 - 16938582
Alignment:
Q  176 gagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  16938515 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctaca 16938582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 46572567 - 46572638
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||| ||||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||    
T  46572567 acgggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctaca 46572638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 48692093 - 48692030
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  48692093 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 48692030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 32685839 - 32685908
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||| ||||||||||||||||||||| ||||| |||||| |||||||  ||||||||||||||||||||    
T  32685839 gggagcggttatggtgcataaggaaatccttatacaccgtgcataaatctcaacataattgcttcctaca 32685908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 15973856 - 15973924
Alignment:
Q  175 ggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||| ||||||||||||||||||||| |||||||||| | ||||||| |||||||| ||||||||||||    
T  15973856 ggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacatagttgcttcctaca 15973924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 48830648 - 48830597
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattcca 225  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  48830648 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattcca 48830597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 33798783 - 33798735
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  33798783 cgggagtggttatggtgcataaggaaatccttatgcaccgtacgtaaat 33798735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 34228600 - 34228654
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaaca 228  Q
    |||||||||||||||||||||| |||| |||||||||||| ||||||| ||||||    
T  34228600 gggagtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaaca 34228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 11732035 - 11732084
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  11732035 acgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaat 11732084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 24360804 - 24360757
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||    
T  24360804 gggagtggttatggtgcataaggaaatatttatgcaccgtgcataaat 24360757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 34227919 - 34227876
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  34227919 ggttatggtgcataaggaaattcttatgcaccctgcataaattc 34227876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 46025108 - 46025062
Alignment:
Q  175 ggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||    
T  46025108 ggagtggttatggtgcataaggaaatccctatgcaccgtgcataaat 46025062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 48306401 - 48306333
Alignment:
Q  171 cacgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||  |||||||||||||||||   |||||||||||||| ||||||| ||||||||||| |||||||||    
T  48306401 cacgggatcggttatggtgcataagg---ttcttatgcaccgtgcataaatcccaacataatt-cttcctaca 48306333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 12286770 - 12286723
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    |||||||||||||||||||||||||||||  |||||||| || |||||    
T  12286770 acgggagtggttatggtgcataaggaaatctttatgcacagtgcataa 12286723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 15974994 - 15974955
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  15974994 gttatggtgcataaggaaatccttatgcaccgtgcataaa 15974955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 211
Target Start/End: Original strand, 26945515 - 26945546
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcacc 211  Q
    ||||||||||||||||||||||||||||||||    
T  26945515 ggttatggtgcataaggaaattcttatgcacc 26945546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 30428880 - 30428919
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  30428880 gttatggtgcataaggaaatccttatgcaccgtgcataaa 30428919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 46004578 - 46004535
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  46004578 ggttatggtgcataaggaaatccttatgcaccctgcataaattc 46004535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 44426590 - 44426640
Alignment:
Q  171 cacgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||| | ||||||||||||||||||||| |||||||||| | |||||||    
T  44426590 cacgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaat 44426640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 5728923 - 5728882
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||| ||||||||||||||| | |||||||    
T  5728923 ggttatggtgcataagaaaattcttatgcaccctgcataaat 5728882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 26945757 - 26945716
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  26945757 ggttatggtgcataaggaaatccttatgcaccctgcataaat 26945716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 38837772 - 38837731
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  38837772 ggttatggtgcataaggaaatccttatgcaccttgcataaat 38837731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 24453 - 24384
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  24453 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 24384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 44777 - 44814
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcacc 211  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44777 gggagtggttatggtgcataaggaaattcttatgcacc 44814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 6900982 - 6900913
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  6900982 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 6900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 15493353 - 15493284
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  15493353 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 15493284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 7089263 - 7089192
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||    
T  7089263 acgggagtggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattgcttcctaca 7089192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 31216842 - 31216772
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  31216842 cgggaatggttatggtgcataaggaaattcttatggaccgtgtataaattccaacataattgcttcctaca 31216772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 34869950 - 34870019
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  34869950 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctaca 34870019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 1449721 - 1449652
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||| |||| |||||||||||| ||||||| |||||||||||| ||||||||    
T  1449721 gggagtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaacataattgtttcctaca 1449652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 878440 - 878370
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||| ||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||| |||||||||    
T  878440 cgggagcggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattacttcctaca 878370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 7765453 - 7765402
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattcca 225  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  7765453 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattcca 7765402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 20522893 - 20522848
Alignment:
Q  178 gtggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||    
T  20522893 gtggttatggtgcataaggaaatccttatgcaccctacataaattc 20522848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 25119107 - 25119150
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  25119107 ggttatggtgcataaggaaattcttatgcaccctgcataaattc 25119150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 14237779 - 14237820
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  14237779 ggttatggtgcataaggaaatccttatgcaccctacataaat 14237820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 18755658 - 18755703
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||    
T  18755658 gggagtggttatggtgcataaggaaatccttatgcacggtgcataa 18755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 30909486 - 30909441
Alignment:
Q  176 gagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||    
T  30909486 gagtggttatggtgcataaggaattccttatgcaccgtgcataaat 30909441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 15035033 - 15034993
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  15035033 gttatggtgcataaggaaatccttatgcaccgtgcataaat 15034993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 10588996 - 10588953
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  10588996 ggttatggtgcataaggaaatccttatgcaccctgcataaattc 10588953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 12394438 - 12394399
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  12394438 gttatggtgcataaggaaatccttatgcaccgtgcataaa 12394399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 18612397 - 18612358
Alignment:
Q  188 tgcataaggaaattcttatgcaccgtacataaattccaac 227  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  18612397 tgcataaggaaatccttatgcaccgtacataaatcccaac 18612358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 22857489 - 22857532
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  22857489 ggttatggtgcataaggaaatccttatgcaccctgcataaattc 22857532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 33346429 - 33346390
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  33346429 gttatggtgcataaggaaatccttatgcaccgtgcataaa 33346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 34399648 - 34399687
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  34399648 gttatggtgcataaggaaatccttatgcaccgtatataaa 34399687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 29163752 - 29163718
Alignment:
Q  188 tgcataaggaaattcttatgcaccgtacataaatt 222  Q
    |||||||||||||||||||||||||| ||||||||    
T  29163752 tgcataaggaaattcttatgcaccgtgcataaatt 29163718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 19284372 - 19284413
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  19284372 ggttatggtgcataaggaaatccttatgcaccctgcataaat 19284413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 20522668 - 20522713
Alignment:
Q  178 gtggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||||||||||||||||||||||  ||||||||| | |||||||||    
T  20522668 gtggttatggtgcataaggaaatatttatgcaccctgcataaattc 20522713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 209
Target Start/End: Original strand, 21384790 - 21384819
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgca 209  Q
    ||||||||||||||||||||||||||||||    
T  21384790 ggttatggtgcataaggaaattcttatgca 21384819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 21385032 - 21384991
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  21385032 ggttatggtgcataaggaaatccttatgcaccctgcataaat 21384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 33345359 - 33345395
Alignment:
Q  202 cttatgcaccgtacataaattccaacataattgcttc 238  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  33345359 cttatgcaccgtgcataaatcccaacataattgcttc 33345395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 35121539 - 35121503
Alignment:
Q  202 cttatgcaccgtacataaattccaacataattgcttc 238  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  35121539 cttatgcaccgtgcataaatcccaacataattgcttc 35121503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 14394647 - 14394578
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  14394647 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 14394578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 14940243 - 14940312
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  14940243 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 14940312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 26637724 - 26637793
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  26637724 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 26637793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 3883922 - 3883991
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||    
T  3883922 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctaca 3883991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 37456859 - 37456790
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||    
T  37456859 gggagtggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctaca 37456790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 15416843 - 15416774
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  15416843 gggagtggttatgatgcataaggaaatccttatgcaccgtgcataaatcccaacatgattgcttcctaca 15416774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 28069242 - 28069311
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||| |||||||||| |||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  28069242 gggagcggttatggtgtataaggaaatccttatgcaccgagcataaattccaacataattgcttcctaca 28069311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 30783636 - 30783568
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  30783636 gggagtggttatgatgcataaggaaatccttatgcaccgtgcataaa-tccaacataattgcttcctaca 30783568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 13553162 - 13553093
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||||| | || ||||||||||||||||    
T  13553162 gggagtggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaatataattgcttcctaca 13553093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 5411799 - 5411756
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  5411799 ggttatggtgcataaggaaattcttatgcacccttcataaattc 5411756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 11660794 - 11660837
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  11660794 ggttatggtgcataaggaaatccttatgcaccctacataaattc 11660837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 23155518 - 23155569
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||| ||||||||||||||||||||||| |||||||||| | |||||||||    
T  23155518 acgggtgtggttatggtgcataaggaaatccttatgcaccctgcataaattc 23155569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 23334704 - 23334752
Alignment:
Q  172 acgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  23334704 acgggaatggttatggtgcataaggaaa-tcttatgcaccgtgcataaat 23334752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 34330207 - 34330166
Alignment:
Q  202 cttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  34330207 cttatgcaccgtgcataaattccaacataattgcttcataca 34330166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 35662068 - 35662109
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  35662068 ggttatggtgcataaggaaatccttatgcaccctacataaat 35662109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 23948631 - 23948591
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgt 213  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  23948631 cgggagtggttatggtgcataagaaaatccttatgcaccgt 23948591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 13362777 - 13362816
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  13362777 gttatggtgcataaggaaatccttatgcaccgtgcataaa 13362816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 15559050 - 15559093
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  15559050 ggttatggtgcataaggaaatccttatgcaccatgcataaattc 15559093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 25017275 - 25017236
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  25017275 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25017236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 28070211 - 28070172
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  28070211 gttatggtgcataaggaaatccttatgcaccgtgcataaa 28070172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 39166150 - 39166193
Alignment:
Q  178 gtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||| |||||||||||||||||||||||||| | |||||||    
T  39166150 gtggttacggtgcataaggaaattcttatgcaccctgcataaat 39166193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 3340591 - 3340633
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaatt 222  Q
    ||||||||||||||||||||| |||||||||| | ||||||||    
T  3340591 ggttatggtgcataaggaaatccttatgcaccctgcataaatt 3340633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 13363842 - 13363796
Alignment:
Q  175 ggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||| |||||||||||| |||||||| |||||||||||| |||||||    
T  13363842 ggagcggttatggtgcacaaggaaatccttatgcaccgtgcataaat 13363796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 25189816 - 25189862
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    |||||||||||||||||||||||||  | |||||||||||| |||||    
T  25189816 cgggagtggttatggtgcataaggatttccttatgcaccgtgcataa 25189862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 36864068 - 36864098
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcac 210  Q
    |||||||||||||||||||||||||||||||    
T  36864068 ggttatggtgcataaggaaattcttatgcac 36864098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 11661025 - 11660984
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  11661025 ggttatggtgcataaggaaatccttatgcaccctgcataaat 11660984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 22695583 - 22695542
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  22695583 ggttatggtgcataaggaaatccttatgcaccttgcataaat 22695542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 25671333 - 25671288
Alignment:
Q  178 gtggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    ||||||||||||||||||||||| |||||| ||| | |||||||||    
T  25671333 gtggttatggtgcataaggaaatccttatgtaccatgcataaattc 25671288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 35662276 - 35662235
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  35662276 ggttatggtgcataaggaaatacttatgcaccctgcataaat 35662235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 39861823 - 39861782
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  39861823 ggttatggtgcataaggaaatccttatgcaccctgcataaat 39861782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 539 - 609
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||    
T  539 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctaca 609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 33864 - 33794
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||    
T  33864 cgggattggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctaca 33794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 6555 - 6493
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||    
T  6555 gttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctaca 6493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 20172 - 20120
Alignment:
Q  171 cacgggagtggttatggtgcataaggaaattcttatgcaccgtacataaattc 223  Q
    |||||| | ||||||||||||||||||||| |||||||||| | |||||||||    
T  20172 cacgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaattc 20120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 25290 - 25251
Alignment:
Q  181 gttatggtgcataaggaaattcttatgcaccgtacataaa 220  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  25290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 211
Target Start/End: Complemental strand, 33859 - 33828
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcacc 211  Q
    ||||||||||||||||||||||||||||||||    
T  33859 ggttatggtgcataaggaaattcttatgcacc 33828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 33617 - 33658
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  33617 ggttatggtgcataaggaaatccttatgcaccctgcataaat 33658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 20974 - 21017
Alignment:
Q  176 gagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    |||||||||||||||||||| |||| |||||||||||| |||||    
T  20974 gagtggttatggtgcataagaaaatccttatgcaccgtgcataa 21017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 8336 - 8377
Alignment:
Q  202 cttatgcaccgtacataaattccaacataattgcttcctaca 243  Q
    |||||||||||| ||||||| ||||||||||||||| |||||    
T  8336 cttatgcaccgtgcataaatcccaacataattgctttctaca 8377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 1291 - 1250
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  1291 ggttatggtgcataaggaaatccttatgcaccctgcataaat 1250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 23545 - 23586
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  23545 ggttatggtgcataaggaaatccttatgcaccctgcataaat 23586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 20479 - 20524
Alignment:
Q  174 gggagtggttatggtgcataaggaaattcttatgcaccgtacataa 219  Q
    ||||||||||||||||||||||||  | |||||||||||| |||||    
T  20479 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 20524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 37634 - 37675
Alignment:
Q  180 ggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||||| |||||||||||||| |||||||||| |||||||||    
T  37634 ggttattgtgcataaggaaatccttatgcaccctacataaat 37675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 28725 - 28685
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgt 213  Q
    |||||| ||||||||||||||||||||| ||| ||||||||    
T  28725 cgggagcggttatggtgcataaggaaatccttttgcaccgt 28685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 51899 - 51947
Alignment:
Q  173 cgggagtggttatggtgcataaggaaattcttatgcaccgtacataaat 221  Q
    |||| ||| ||||||||||||||||||| |||||||||| | |||||||    
T  51899 cgggtgtgattatggtgcataaggaaatccttatgcaccctgcataaat 51947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University