View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7237_low_6 (Length: 327)
Name: NF7237_low_6
Description: NF7237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7237_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 9340222 - 9339911
Alignment:
| Q |
1 |
atgaacaaataattaagcataaagcagaaatgatgtacacataaaaaataaagacaaaaattaaggccattcaattgtgatttgaatagtgagtacgaag |
100 |
Q |
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| T |
9340222 |
atgaacaaataattaagcataaagtagaaatgatgtacacataacaaataaagacaaaaattaaggtcatttaattgtgatttgaatagtgagtcggaag |
9340123 |
T |
|
| Q |
101 |
ccatttccagcatcgtaaattaagtcttactagcagtggccatacaatactaatagaaatatgtttattttttagaaca-aacacaacataagcaataat |
199 |
Q |
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| T |
9340122 |
acatttacagcgtcgtaaattaagtcttactagcagtggccatacaatactaatagaaatatgtttattttttagaacaggtgacgacataagcaataat |
9340023 |
T |
|
| Q |
200 |
aaacaagctgacacaccataaatgaacttcaaagcaaaacataagtagatgataataataataataaaatgagaaaacaattacttaccctcatcttgtg |
299 |
Q |
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|| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9340022 |
aagcaagccaacacaccataaatgaacttcaaagcaaaacataagtagatg---ataataataataaaatgagaaaacaattacttaccctcatcttgtg |
9339926 |
T |
|
| Q |
300 |
caacaatattattga |
314 |
Q |
| |
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|| |||||||||||| |
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| T |
9339925 |
caccaatattattga |
9339911 |
T |
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