View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7238_low_7 (Length: 243)

Name: NF7238_low_7
Description: NF7238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7238_low_7
NF7238_low_7
[»] chr7 (10 HSPs)
chr7 (1-243)||(14230587-14230828)
chr7 (1-243)||(14319637-14319879)
chr7 (33-243)||(31155232-31155441)
chr7 (35-243)||(21230967-21231175)
chr7 (110-243)||(13679408-13679541)
chr7 (192-243)||(2971250-2971301)
chr7 (192-243)||(20906469-20906520)
chr7 (60-119)||(16677159-16677218)
chr7 (60-119)||(17651395-17651454)
chr7 (192-243)||(29181117-29181168)
[»] scaffold0453 (1 HSPs)
scaffold0453 (1-240)||(10561-10799)
[»] chr2 (9 HSPs)
chr2 (1-243)||(27207727-27207969)
chr2 (9-243)||(23168306-23168543)
chr2 (9-243)||(23579563-23579800)
chr2 (34-243)||(26885022-26885229)
chr2 (103-243)||(23265050-23265190)
chr2 (103-243)||(23280118-23280258)
chr2 (192-243)||(10573-10624)
chr2 (192-243)||(25180937-25180988)
chr2 (60-119)||(26583694-26583753)
[»] scaffold0720 (1 HSPs)
scaffold0720 (1-235)||(3418-3651)
[»] scaffold2054 (1 HSPs)
scaffold2054 (1-243)||(519-762)
[»] chr4 (5 HSPs)
chr4 (1-243)||(27906071-27906313)
chr4 (35-119)||(15407978-15408062)
chr4 (166-243)||(14486631-14486708)
chr4 (192-243)||(16146838-16146889)
chr4 (151-227)||(8834852-8834928)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-243)||(23577-23819)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-243)||(73090-73332)
[»] chr6 (7 HSPs)
chr6 (1-243)||(11288676-11288919)
chr6 (7-243)||(31252235-31252470)
chr6 (33-243)||(15458327-15458537)
chr6 (33-243)||(15464922-15465132)
chr6 (35-243)||(9187334-9187543)
chr6 (112-243)||(24512851-24512982)
chr6 (179-243)||(34639994-34640058)
[»] chr5 (7 HSPs)
chr5 (1-243)||(34829891-34830131)
chr5 (60-243)||(18407951-18408134)
chr5 (103-243)||(23111207-23111347)
chr5 (192-243)||(19236896-19236947)
chr5 (192-243)||(20781740-20781791)
chr5 (198-243)||(22461158-22461203)
chr5 (198-243)||(22467782-22467827)
[»] scaffold0609 (1 HSPs)
scaffold0609 (71-243)||(5865-6036)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-243)||(493036-493276)
[»] chr1 (8 HSPs)
chr1 (9-243)||(20044959-20045193)
chr1 (35-212)||(19663555-19663733)
chr1 (60-242)||(18712664-18712846)
chr1 (151-243)||(32651528-32651620)
chr1 (192-243)||(20851140-20851191)
chr1 (192-243)||(20857767-20857818)
chr1 (192-243)||(21706272-21706323)
chr1 (192-243)||(21710814-21710865)
[»] scaffold0249 (1 HSPs)
scaffold0249 (33-243)||(13902-14111)
[»] scaffold0124 (1 HSPs)
scaffold0124 (35-212)||(34314-34492)
[»] scaffold0020 (1 HSPs)
scaffold0020 (17-243)||(101935-102161)
[»] scaffold0206 (1 HSPs)
scaffold0206 (1-97)||(18425-18521)
[»] chr3 (10 HSPs)
chr3 (33-243)||(17240520-17240730)
chr3 (179-243)||(10389451-10389515)
chr3 (179-243)||(10414540-10414604)
chr3 (179-243)||(10421210-10421274)
chr3 (35-243)||(13302248-13302455)
chr3 (35-243)||(13323795-13324003)
chr3 (192-243)||(12033452-12033503)
chr3 (192-243)||(17131728-17131779)
chr3 (35-243)||(13312904-13313111)
chr3 (192-243)||(14865842-14865893)
[»] scaffold0461 (1 HSPs)
scaffold0461 (62-243)||(15-196)
[»] scaffold0146 (1 HSPs)
scaffold0146 (109-243)||(13546-13680)
[»] scaffold0019 (1 HSPs)
scaffold0019 (35-243)||(135312-135521)
[»] scaffold0004 (1 HSPs)
scaffold0004 (62-243)||(116763-116944)
[»] scaffold0107 (1 HSPs)
scaffold0107 (35-243)||(40539-40748)
[»] scaffold0222 (1 HSPs)
scaffold0222 (62-243)||(16687-16868)
[»] chr8 (7 HSPs)
chr8 (103-243)||(23482060-23482200)
chr8 (155-243)||(29643393-29643480)
chr8 (151-243)||(18614229-18614320)
chr8 (192-243)||(24320678-24320729)
chr8 (62-117)||(14056696-14056751)
chr8 (103-217)||(19750457-19750572)
chr8 (62-106)||(29643530-29643574)
[»] scaffold0317 (1 HSPs)
scaffold0317 (110-243)||(1301-1434)
[»] scaffold0235 (1 HSPs)
scaffold0235 (35-243)||(22600-22808)
[»] scaffold0023 (1 HSPs)
scaffold0023 (69-236)||(135313-135478)
[»] scaffold1318 (1 HSPs)
scaffold1318 (192-243)||(1920-1971)
[»] scaffold0348 (1 HSPs)
scaffold0348 (192-243)||(9332-9383)
[»] scaffold1461 (1 HSPs)
scaffold1461 (189-243)||(1492-1546)
[»] scaffold0028 (1 HSPs)
scaffold0028 (108-243)||(69658-69794)
[»] scaffold0053 (1 HSPs)
scaffold0053 (192-243)||(79498-79549)
[»] scaffold0335 (1 HSPs)
scaffold0335 (151-227)||(2651-2728)
[»] scaffold0139 (1 HSPs)
scaffold0139 (151-227)||(15020-15096)
[»] scaffold0815 (1 HSPs)
scaffold0815 (199-227)||(1453-1481)


Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 14230587 - 14230828
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||    
T  14230587 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcagaacatagcaacatcatagattaagaaatcatacagaatatcaaatt 14230686  T
Q  101 acaacatattaaacatgattcatacacctttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattt 200  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14230687 acaacatattaaacatgattcttacacctttctttcaaaatcagtctcataccctaattctcaa-ttttatcttcaagaactattcttttagattaattt 14230785  T
Q  201 tcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  14230786 tcagaaattatacattaaattcattgaaagataatcccaccct 14230828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 14319879 - 14319637
Alignment:
Q  1 tcatacacaacttt-ctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatt 99  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||| |    
T  14319879 tcatacacaacttttctcaattcattcaaccagtcttaatttcattcccattcagaacatagcaacatcatagattaagaaattatacagaatatcaaat 14319780  T
Q  100 tacaacatattaaacatgattcatacacctttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaatt 199  Q
    | |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14319779 tgcaacatattaaacatgattcttacacctttctttcaaaatcagtctcataccctaattctcaa-ttttatcttcaagaactattcttttagattaatt 14319681  T
Q  200 ttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  14319680 ttcagaaattatacattaaaatcattgaaagataatcccaccct 14319637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 33 - 243
Target Start/End: Original strand, 31155232 - 31155441
Alignment:
Q  33 tcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc 132  Q
    ||||||| ||| || |||||| || |||||| || || |||||||||||||||||| || ||||||| || |||| |||||||| |||| ||||||||||    
T  31155232 tcctaatctcaatctaattcagaatatagcagcagtacagattaagaaatcatacataacatcaatt-accacatgttaaacataattcttacacctttc 31155330  T
Q  133 tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaa-ttttcagaaattatacattaagatcattgaaaga 231  Q
    ||||||||| ||||||||||||||||||||||||||  |||| || ||||||||   |||||||| ||||||||||||||| ||||  ||||||||||||    
T  31155331 tttcaaaatcagtctcataccctaattctcaattttattctt-aaaaactattcaactagattaatttttcagaaattatatattataatcattgaaaga 31155429  T
Q  232 taatcccaccct 243  Q
    ||||||||||||    
T  31155430 taatcccaccct 31155441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 243
Target Start/End: Complemental strand, 21231175 - 21230967
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacc-tttct 133  Q
    |||||||||||| |||||  | || | |||||||||||||||||||||||| | ||| | ||| |||||||| |||||||||||||| |||||| || ||    
T  21231175 ctaatttcattcaaattctgatcacaacaacattatagattaagaaatcattctgaacaccaaattacaacacattaaacatgattcttacaccattcct 21231076  T
Q  134 ttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattc-ttttagattaattttcagaaattatacattaagatcattgaaagat 232  Q
    |||| ||| ||  ||| |||||||||| ||||||||||| |||||||| |||| | ||| |  ||||||||||||||||| | || ||| ||||| ||||    
T  21231075 ttcagaatcagcatca-accctaattcccaatttttatc-tcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagat 21230978  T
Q  233 aatcccaccct 243  Q
    | || ||||||    
T  21230977 agtctcaccct 21230967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 13679408 - 13679541
Alignment:
Q  110 taaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattttcagaaat 208  Q
    ||||||| |||| |||||| ||| ||||||||| ||  ||| ||||||||||||| |||| ||| |||||||| |||   |||||| |||||||| ||||    
T  13679408 taaacataattcttacaccattcctttcaaaatcagcatcaaaccctaattctcagtttt-atcatcaagaacaatttaattagatcaattttcaaaaat 13679506  T
Q  209 tatacattaagatcattgaaagataatcccaccct 243  Q
    |||| || | ||||||||||||||| || ||||||    
T  13679507 tatatatcatgatcattgaaagatagtctcaccct 13679541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 2971250 - 2971301
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  2971250 gattaattttcagaaattataaattatgactattgaaagataatcccaccct 2971301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 20906520 - 20906469
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  20906520 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 20906469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 16677159 - 16677218
Alignment:
Q  60 agcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgat 119  Q
    ||||||||||||||||| ||| |||| | ||| |||| ||||||||||||| ||||||||    
T  16677159 agcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgat 16677218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 17651395 - 17651454
Alignment:
Q  60 agcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgat 119  Q
    ||||||||||||||||| ||| |||| | ||| |||| ||||||||||||| ||||||||    
T  17651395 agcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgat 17651454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 29181168 - 29181117
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||| | |||| ||  |||||||||||||||||||||    
T  29181168 gattaattttcagaaattacatattatgactattgaaagataatcccaccct 29181117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10799 - 10561
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaattt 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  10799 tcatacacaactttctcaattcattcaaccaatcctaatttcattccaattcagaacatagaaacattatagattaagaaatcatacagaacatcaaatt 10700  T
Q  101 acaacatattaaacatgattcatacacctttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattt 200  Q
    |||||  |||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  10699 acaactcattaaacatgattcttacacctttctttcaaaatcagcctcataccctaattctcaa-ttttatcttcaagaactattctattagattaattt 10601  T
Q  201 tcagaaattatacattaagatcattgaaagataatcccac 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10600 tcagaaattatacattaagatcattgaaagataatcccac 10561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 27207969 - 27207727
Alignment:
Q  1 tcatacacaacttt-ctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatt 99  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||| |    
T  27207969 tcatacacaacttttctcaattcattcaaccagtcttaatttcattcccattcagaacatagcaacatcatagattaagaaattatacagaatatcaaat 27207870  T
Q  100 tacaacatattaaacatgattcatacacctttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaatt 199  Q
    | |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27207869 tgcaacatattaaacatgattcttacacctttctttcaaaatcagtctcataccctaattctcaa-ttttatcttcaagaactattcttttagattaatt 27207771  T
Q  200 ttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  27207770 ttcagaaattatacattaaaatcattgaaagataatcccaccct 27207727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 23168543 - 23168306
Alignment:
Q  9 aactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacata 108  Q
    ||||| |||||||||||||| ||  |||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| ||||| |||||||| |    
T  23168543 aacttgctcaattcattcaatcaaccctaatttcattccaattccgaacatagcatcattatagattaagaaatcatactgaacatcaaattacaacaca 23168444  T
Q  109 ttaaacatgattcatacacc-tttctttcaaaatgagtctcataccctaattctcaa--tttttatcttcaagaactattcttttagattaa-ttttcag 204  Q
    |||||||||| || |||||| ||||||||||||| ||  ||||||||||||||||||  ||||||||||||| ||||||||| ||||||||| |||||||    
T  23168443 ttaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaatttttttatcttcaa-aactattctattagattaatttttcag 23168345  T
Q  205 aaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  23168344 aaattatacattatgatcaatgaaagataatcccaccct 23168306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 23579800 - 23579563
Alignment:
Q  9 aactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacata 108  Q
    ||||| |||||||||||||| ||  |||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| ||||| |||||||| |    
T  23579800 aacttgctcaattcattcaatcaaccctaatttcattccaattccgaacatagcatcattatagattaagaaatcatactgaacatcaaattacaacaca 23579701  T
Q  109 ttaaacatgattcatacacc-tttctttcaaaatgagtctcataccctaattctcaa--tttttatcttcaagaactattcttttagattaa-ttttcag 204  Q
    |||||||||| || |||||| ||||||||||||| ||  ||||||||||||||||||  ||||||||||||| ||||||||| ||||||||| |||||||    
T  23579700 ttaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaatttttttatcttcaa-aactattctattagattaatttttcag 23579602  T
Q  205 aaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  23579601 aaattatacattatgatcaatgaaagataatcccaccct 23579563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 34 - 243
Target Start/End: Original strand, 26885022 - 26885229
Alignment:
Q  34 cctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacaccttt-c 132  Q
    |||||||||||||||||||  ||||||||||||||  |||||||||||||||||| || |||||  |||   | || || |||||||| ||||||||| |    
T  26885022 cctaatttcattccaattctaaacatagcaacatttcagattaagaaatcatacaaaacatcaaactactttacatcaa-catgattcttacaccttttc 26885120  T
Q  133 tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagat 232  Q
    ||||||||| ||  | ||||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||| |||| ||||||||||    
T  26885121 tttcaaaattagcattataccctaattctcaattttt-tctccaagaactattccattagattaattttcagaaattatacatt-agattattgaaagat 26885218  T
Q  233 aatcccaccct 243  Q
    |||||||||||    
T  26885219 aatcccaccct 26885229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 243
Target Start/End: Original strand, 23265050 - 23265190
Alignment:
Q  103 aacatattaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaatttt 201  Q
    |||| |||||||||||||| |||||| ||| ||||||||| ||  ||| ||||||||||||||||||||| ||||||||| ||||  |||||| ||||||    
T  23265050 aacacattaaacatgattcttacaccattcctttcaaaatcagcatca-accctaattctcaatttttattttcaagaacaattcaattagatcaatttt 23265148  T
Q  202 cagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||| | || ||| ||||| ||||| || ||||||    
T  23265149 cagaaattatatactatgattattgagagatagtctcaccct 23265190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 243
Target Start/End: Original strand, 23280118 - 23280258
Alignment:
Q  103 aacatattaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaatttt 201  Q
    |||| |||||||||||||| |||||| ||| ||||||||| ||  ||| ||||||||||||||||||||| ||||||||| ||||  |||||| ||||||    
T  23280118 aacacattaaacatgattcttacaccattcctttcaaaatcagcatca-accctaattctcaatttttattttcaagaacaattcaattagatcaatttt 23280216  T
Q  202 cagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||| | || ||| ||||| ||||| || ||||||    
T  23280217 cagaaattatatactatgattattgagagatagtctcaccct 23280258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 10573 - 10624
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  10573 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 10624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 25180988 - 25180937
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  25180988 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 25180937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 26583694 - 26583753
Alignment:
Q  60 agcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgat 119  Q
    ||||||||||||||||| ||| |||| | ||| |||| ||||||||||||| ||||||||    
T  26583694 agcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgat 26583753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 3651 - 3418
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaattt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||    
T  3651 tcatacacaactttttcaattcattcaaccagtcctaatttcattctaattcagaacatagcaacatcatagattaagaaatcatacagaatatcaaatt 3552  T
Q  101 acaacatattaaacatgattcatacacctttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattt 200  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3551 acaacatattaaacatgattcttacacctttctttcaaaatcagtctcataccctaattctcaa-ttttatcttcaagaactattcttttagattaattt 3453  T
Q  201 tcagaaattatacattaagatcattgaaagataat 235  Q
    |||||||||||| |||||  |||||||||||||||    
T  3452 tcagaaattatatattaaattcattgaaagataat 3418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 519 - 762
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaa-ttcataacatagcaacattatagattaagaaatcatacagaatatcaatt 99  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| ||| |    
T  519 tcatacacaactttctcaattcaatcaaccaatcctaatttcattccaaattcagaacatagcaacattatagattaagtaatcatacagaataccaaat 618  T
Q  100 tacaacatattaaacatgattcatacacctttctttcaaaatgagtctcataccctaa-ttctcaatttttatcttcaagaactattcttttagattaa- 197  Q
    |||||| ||||||||||||||| | ||| ||||||| ||||| ||||||||||||||| |||||||  ||||| |||||||||||||||||||| ||||     
T  619 tacaacctattaaacatgattcttccacttttctttaaaaatcagtctcataccctaatttctcaa--tttattttcaagaactattcttttaggttaat 716  T
Q  198 ttttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccaccct 762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 27906071 - 27906313
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaattt 100  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||  ||| ||||||||||||||||||||||||||||| ||| ||||| ||    
T  27906071 tcatacaaaactttctcaattcattcaaccaatcctaatgtcattccgattccgaacgtagcaacattatagattaagaaatcatacggaacatcaaatt 27906170  T
Q  101 acaacatattaaacatgattcatacacc-tttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaatt 199  Q
    |||||| |||||||||||||| |||||| ||||||||||||| |   ||| |||||||||||||| |||||||||||||||||||||| ||| |||||||    
T  27906171 acaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctcaa-ttttatcttcaagaactattctattatattaatt 27906269  T
Q  200 ttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  27906270 ttcagaaattatacattatgatcattgaaagataatcccaccct 27906313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 15407978 - 15408062
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgat 119  Q
    |||||||||||| |||||  | || |||||||||||||||||||||||||| | ||| ||||| |||||||| ||||||||||||    
T  15407978 ctaatttcattcaaattctgatcacagcaacattatagattaagaaatcattctgaacatcaaattacaacacattaaacatgat 15408062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 14486631 - 14486708
Alignment:
Q  166 ttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    |||||||||||||||| ||||  || ||||||||||||||||||||| |||| |||||||||| |||| || ||||||    
T  14486631 ttttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcaccct 14486708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 16146889 - 16146838
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||| | |||| ||  |||||||||||||||||||||    
T  16146889 gattaattttcagaaattacatattatgactattgaaagataatcccaccct 16146838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 8834852 - 8834928
Alignment:
Q  151 accctaattctcaatttttatcttcaagaactattctt-ttagattaattttcagaaattatacattaagatcattga 227  Q
    ||||||||||||||||  ||| ||||||||| |||| | ||| || ||||||||||||||||| |||| |||||||||    
T  8834852 accctaattctcaattcctat-ttcaagaacaattcatgttaaatcaattttcagaaattatatattatgatcattga 8834928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 23819 - 23577
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaattt 100  Q
    ||||||| |||||||||||||||||||| ||  ||| ||||||||||||||   ||||||||||||||||||||||||||||||||| ||| ||||| ||    
T  23819 tcatacaaaactttctcaattcattcaatcaaccctcatttcattccaatttcgaacatagcaacattatagattaagaaatcatactgaacatcaaatt 23720  T
Q  101 acaacatattaaacatgattcataca-cctttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaatt 199  Q
    |||||| |||||||||||||| |||| | ||||||||||||| ||  ||| |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23719 acaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctcaa-ttttgtcttcaagaactattcttttagattaatt 23621  T
Q  200 ttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  23620 ttcagaaattatacattatgatcattcaaagataatcccaccct 23577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 73090 - 73332
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaattt 100  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||||||||  ||| ||||||||||||||||||||||||||||| ||| ||||| ||    
T  73090 tcatacaaaactttctcaattcattcaaccaatcctaatatcattccaattctgaacgtagcaacattatagattaagaaatcatacggaacatcaaatt 73189  T
Q  101 acaacatattaaacatgattcatacacc-tttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaatt 199  Q
    |||||| |||||||||||||| |||||| ||||||||||||| |   ||| |||||||||||||| |||||||||||||| |||| || |||||||||||    
T  73190 acaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctcaa-ttttatcttcaagagctatcctattagattaatt 73288  T
Q  200 ttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  73289 ttcataaattatacattatgatcattgaaagataatcccaccct 73332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 11288919 - 11288676
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaa-ttcataacatagcaacattatagattaagaaatcatacagaatatcaatt 99  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| ||| |    
T  11288919 tcatacacaactttcttaattcaatcaaccaatcctaatttcattccaaattcagaacatagcaacattatagattaagtaatcatacagaataccaaat 11288820  T
Q  100 tacaacatattaaacatgattcatacacctttctttcaaaatgagtctcataccctaa-ttctcaatttttatcttcaagaactattcttttagattaa- 197  Q
    |||||| | ||||||||||||| | ||| ||||||| ||||| ||||||||||||||| |||||||  ||||| |||||||||||||||||||| ||||     
T  11288819 tacaaccttttaaacatgattcttccacttttcttttaaaatcagtctcataccctaatttctcaa--tttattttcaagaactattcttttaggttaat 11288722  T
Q  198 ttttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccaccct 11288676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 7 - 243
Target Start/End: Original strand, 31252235 - 31252470
Alignment:
Q  7 acaactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaaca 106  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||| || |||||| ||||| |||||||||||||||||| |  ||||| ||||||||    
T  31252235 acaattttctcaattcaatcaaccaatcctaatttcattccaattcagaatatagcagcattacagattaagaaatcatacatagcatcaaattacaaca 31252334  T
Q  107 tattaaacatgattcatacacctttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattttcagaa 206  Q
      |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  31252335 cgttaaacataattcttacacctttctttcaaaatcagcctcataccctaattctcaa-ttttatcttcaagaactattcaattagattaattttcagaa 31252433  T
Q  207 attatacattaagatcattgaaagataatcccaccct 243  Q
    |||||| ||||  |||||| |||||||||| ||||||    
T  31252434 attatatattataatcattaaaagataatctcaccct 31252470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 243
Target Start/End: Original strand, 15458327 - 15458537
Alignment:
Q  33 tcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc 132  Q
    ||||||| ||| || |||||| || |||||| || || |||||||||||||||||| || ||||||| || |||| |||||||| |||| ||||||||||    
T  15458327 tcctaatctcaatctaattcagaatatagcagcagtacagattaagaaatcatacataacatcaatt-accacatgttaaacataattcttacacctttc 15458425  T
Q  133 tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaa--ttttcagaaattatacattaagatcattgaaag 230  Q
    |||||||||  |||||||||||||||||||||||||  |||| || ||||||||  |||||||||  ||||||||||||||| ||||  |||||||||||    
T  15458426 tttcaaaatcggtctcataccctaattctcaattttattctt-aaaaactattcaattagattaattttttcagaaattatatattataatcattgaaag 15458524  T
Q  231 ataatcccaccct 243  Q
    |||||||||||||    
T  15458525 ataatcccaccct 15458537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 243
Target Start/End: Original strand, 15464922 - 15465132
Alignment:
Q  33 tcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc 132  Q
    ||||||| ||| || |||||| || |||||| || || |||||||||||||||||| || ||||||| || |||| |||||||| |||| ||||||||||    
T  15464922 tcctaatctcaatctaattcagaatatagcagcagtacagattaagaaatcatacataacatcaatt-accacatgttaaacataattcttacacctttc 15465020  T
Q  133 tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaa--ttttcagaaattatacattaagatcattgaaag 230  Q
    |||||||||  |||||||||||||||||||||||||  |||| || ||||||||  |||||||||  ||||||||||||||| ||||  |||||||||||    
T  15465021 tttcaaaatcggtctcataccctaattctcaattttattctt-aaaaactattcaattagattaattttttcagaaattatatattataatcattgaaag 15465119  T
Q  231 ataatcccaccct 243  Q
    |||||||||||||    
T  15465120 ataatcccaccct 15465132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 243
Target Start/End: Original strand, 9187334 - 9187543
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcataca-cctttct 133  Q
    |||||||||||| |||||  | || | |||||||||||||||||||||||| | ||| |  || |||||||| |||||||||||||| |||| | || ||    
T  9187334 ctaatttcattcaaattctgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcct 9187433  T
Q  134 ttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagat-taattttcagaaattatacattaagatcattgaaagat 232  Q
    |||||||| ||  ||| |||||||||| |||||||||| ||||||||| ||||  |||||| || ||||||||||||||  |||||||| ||||| ||||    
T  9187434 ttcaaaatcagcatca-accctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagat 9187532  T
Q  233 aatcccaccct 243  Q
    | || ||||||    
T  9187533 agtctcaccct 9187543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 24512982 - 24512851
Alignment:
Q  112 aacatgattcatacacctttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattc-ttttagattaattttcagaaatta 210  Q
    |||||||||| ||||| || | |||||||| ||| |   |||||||||| ||||||||||| |||||||| |||| | ||| |  |||||||||||||||    
T  24512982 aacatgattcctacactttcccttcaaaatcagtatagaaccctaattcccaatttttatc-tcaagaacaattcatgttaaaacaattttcagaaatta 24512884  T
Q  211 tacattaagatcattgaaagataatcccaccct 243  Q
    || | || ||| ||||| ||||| || ||||||    
T  24512883 tatactatgattattgagagatagtctcaccct 24512851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 34640058 - 34639994
Alignment:
Q  179 aactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||  |||| | ||||||||||||||||| |||||||| ||||| ||||| || ||||||    
T  34640058 aactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcaccct 34639994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 34829891 - 34830131
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaattt 100  Q
    ||||||| |||||  ||||||||||||| ||  |||||||||||||||||||  ||| |||||||||| |||||||||||||||||| ||  ||||| ||    
T  34829891 tcatacaaaacttcatcaattcattcaatcaaccctaatttcattccaattccgaacctagcaacattgtagattaagaaatcatactgatcatcaaatt 34829990  T
Q  101 acaacatattaaacatgattcatacacctttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattt 200  Q
    |||||| |||||||||||||| |||| |||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  34829991 acaacacattaaacatgattcttacatctttctttcaaaatcagcatcataccctaattctcaa-ttttatcttcaagaactattctattagattgattt 34830089  T
Q  201 tcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  34830090 tcagaaattatacattaa-attattgaaagataatcccaccct 34830131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 18408134 - 18407951
Alignment:
Q  60 agcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaat 158  Q
    |||||||||||||||||||||||||| | ||| || ||     |||| |||||||||||||| |||||| ||| ||||||||| ||  ||| ||||||||    
T  18408134 agcaacattatagattaagaaatcattctgaacatgaaaactaaacacattaaacatgattcttacaccattcctttcaaaatcagcatca-accctaat 18408036  T
Q  159 tctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    || |||||||||| ||||||||| ||||  |||||| ||||||||||||||||| |||| ||| ||||| ||||| || ||||||    
T  18408035 tcccaatttttattttcaagaacaattcaattagatcaattttcagaaattatatattatgattattgagagatagtctcaccct 18407951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 243
Target Start/End: Complemental strand, 23111347 - 23111207
Alignment:
Q  103 aacatattaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaatttt 201  Q
    |||| |||||||||||||| |||||| | | ||||||||| ||  ||| |||||||||| |||||||||| ||||||||| ||||  |||||| ||||||    
T  23111347 aacacattaaacatgattcttacaccatccctttcaaaatcagcatca-accctaattcccaatttttattttcaagaacaattcaattagatcaatttt 23111249  T
Q  202 cagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||| | || ||| ||||| ||||| || ||||||    
T  23111248 cagaaattatatactatgattattgagagatagtctcaccct 23111207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 19236896 - 19236947
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  19236896 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 19236947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 20781740 - 20781791
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||| ||| ||||  || |||||||||||||||||||||    
T  20781740 gattaattttcagaaatcatatattataattattgaaagataatcccaccct 20781791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 22461158 - 22461203
Alignment:
Q  198 ttttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccaccct 22461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 22467782 - 22467827
Alignment:
Q  198 ttttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccaccct 22467827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 6036 - 5865
Alignment:
Q  71 agattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttctttcaaaatgagtctcataccctaattctcaattttta 170  Q
    |||||||||||||||||| || ||||| ||||||||| |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||| |||||    
T  6036 agattaagaaatcatacataacatcaaattacaacatgttaaacataattcttacacctttctttcaaaatcagcctcataccctaattctcaa-tttta 5938  T
Q  171 tcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  5937 tcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccaccct 5865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 493276 - 493036
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaattt 100  Q
    ||||||| |||||||||||||||||||| ||  |||||||||||||||||||  ||||||||||||||| |||||||||||||||||| || |||||  |    
T  493276 tcatacaaaactttctcaattcattcaatcatccctaatttcattccaattctgaacatagcaacattacagattaagaaatcatacaaaacatcaaact 493177  T
Q  101 acaacatattaaacatgattcatacaccttt-ctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaatt 199  Q
    ||   | || || |||||||| ||||||||| |||||||||| ||  | |||||||||||||| ||||| |||| ||||||||||||  |||||||||||    
T  493176 actttacatcaa-catgattcttacaccttttctttcaaaatcagcattataccctaattctctatttt-atctccaagaactattccattagattaatt 493079  T
Q  200 ttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||    
T  493078 ttcagaaattatacatt-agattattgaaagataatctcaccct 493036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 20045193 - 20044959
Alignment:
Q  9 aactttctcaattcattcaaccagtcctaatttcattccaa-ttcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacat 107  Q
    |||||||||||||||||| |||| |||||||||||||| || |||| |  | |||||||| |||||||||||||||| |||||||||||| |||||| ||    
T  20045193 aactttctcaattcattccaccaatcctaatttcattctaaattcagagaacagcaacatcatagattaagaaatcaaacagaatatcaaattacaatat 20045094  T
Q  108 attaaacatgattcatacacctttctttcaaaatgagtctcataccctaa-ttctcaatttttatcttcaagaactattctttt--agattaattttcag 204  Q
    |||||||||||||| | ||  ||||||||||||| ||||||||| ||||| |||||||  |||| |||||| ||||||| ||||  || | | |||||||    
T  20045093 attaaacatgattcttcca--tttctttcaaaatcagtctcataacctaatttctcaa--tttaccttcaaaaactattttttttaagttaatttttcag 20044998  T
Q  205 aaattatacattaagatcattgaaagataatcccaccct 243  Q
    || ||||| ||||||||||||||| ||||||||||||||    
T  20044997 aatttatatattaagatcattgaaggataatcccaccct 20044959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 19663733 - 19663555
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacc-tttct 133  Q
    ||||||||||||||||||  | || |||||||||||||||||||||||||| | ||| ||||| |||||||| ||||||||| |||| |||||| || ||    
T  19663733 ctaatttcattccaattctgatcacagcaacattatagattaagaaatcattctgaacatcaaattacaacacattaaacataattcttacaccattcct 19663634  T
Q  134 ttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattc-ttttagattaattttcagaaattata 212  Q
    |||||||| ||  ||| |||||||||| ||||||||||  |||||||| |||| | ||| |  |||||||||||||||||    
T  19663633 ttcaaaatcagcatca-accctaattcccaatttttattctcaagaacaattcatgttaaaacaattttcagaaattata 19663555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 18712664 - 18712846
Alignment:
Q  60 agcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaat 158  Q
    |||||||||||||||||||||||||| | ||| |  ||     |||| |||||||||||||| |||||| ||| ||||||||| ||  ||| ||||||||    
T  18712664 agcaacattatagattaagaaatcattctgaacacgaaaactaaacacattaaacatgattcttacaccattcctttcaaaatcagcatca-accctaat 18712762  T
Q  159 tctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccc 242  Q
    ||| ||||||||  ||||||||| ||||  |||||| ||||||||||||||||| | || ||| ||||| ||||| || |||||    
T  18712763 tctaaatttttaatttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcaccc 18712846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 32651528 - 32651620
Alignment:
Q  151 accctaattctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    |||||||||| |||||||||| ||||||||| | ||  |||||| ||||||||||||||||| | || ||| ||||| ||||| || ||||||    
T  32651528 accctaattcccaatttttattttcaagaacaactcaattagatcaattttcagaaattatatactatgattattgagagatagtctcaccct 32651620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 20851191 - 20851140
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  20851191 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 20851140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 20857818 - 20857767
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  20857818 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 20857767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 21706272 - 21706323
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  21706272 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 21706323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 21710814 - 21710865
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  21710814 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 21710865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 33 - 243
Target Start/End: Complemental strand, 14111 - 13902
Alignment:
Q  33 tcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc 132  Q
    ||||||| ||| || |||||| || |||||| || || |||||||||||||||||| || ||||||| || |||| |||||||| |||| ||||||||||    
T  14111 tcctaatctcaatctaattcagaatatagcagcagtacagattaagaaatcatacataacatcaatt-accacatgttaaacataattcttacacctttc 14013  T
Q  133 tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaa-ttttcagaaattatacattaagatcattgaaaga 231  Q
    |||||||||  |||||||||||||||||||||||||  |||| || ||||||||  ||||||||| ||||||||||||||| ||||  ||||||||||||    
T  14012 tttcaaaatctgtctcataccctaattctcaattttattctt-aaaaactattcaattagattaatttttcagaaattatatattataatcattgaaaga 13914  T
Q  232 taatcccaccct 243  Q
    ||||||||||||    
T  13913 taatcccaccct 13902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 34492 - 34314
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacc-tttct 133  Q
    ||||||||||||||||||  | || |||||||||||||||||||||||||| | ||| ||||| |||||||| ||||||||| |||| |||||| || ||    
T  34492 ctaatttcattccaattctgatcacagcaacattatagattaagaaatcattctgaacatcaaattacaacacattaaacataattcttacaccattcct 34393  T
Q  134 ttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattc-ttttagattaattttcagaaattata 212  Q
    |||||||| ||  ||| |||||||||| ||||||||||  |||||||| |||| | ||| |  |||||||||||||||||    
T  34392 ttcaaaatcagcatca-accctaattcccaatttttattctcaagaacaattcatgttaaaacaattttcagaaattata 34314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 102161 - 101935
Alignment:
Q  17 caattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacat 116  Q
    ||||| ||||||| | | |||||||||||| |||||  | |||| |||||||||||||||||||||||| | ||||||||| || ||||| |||||||||    
T  102161 caatttattcaacaaattctaatttcattcaaattctgatcataacaacattatagattaagaaatcattctgaatatcaaatttcaacacattaaacat 102062  T
Q  117 gattcatacacc-tttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacat 215  Q
    ||||| |||||| || ||| |  ||| ||   || ||| |||||| |||||||||| ||||||||| ||||  |||||| ||||||||| ||||||| |     
T  102061 gattcttacaccattccttcctgaatcagcaaca-accttaattcccaatttttattttcaagaacaattcaattagatcaattttcaggaattatatac 101963  T
Q  216 taagatcattgaaagataatcccaccct 243  Q
    || ||| ||||| ||||| || ||||||    
T  101962 tatgattattgagagatagtctcaccct 101935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18425 - 18521
Alignment:
Q  1 tcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaa 97  Q
    ||||||| |||||||||||||||||||| ||  |||||||||||||||||||   |||||||||||||| |||||||||||||||||| || |||||    
T  18425 tcatacaaaactttctcaattcattcaatcatccctaatttcattccaattctggacatagcaacattacagattaagaaatcatacaaaacatcaa 18521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 243
Target Start/End: Complemental strand, 17240730 - 17240520
Alignment:
Q  33 tcctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc 132  Q
    |||||||||| ||| |||||  | || |||||||||||||||||| |||||||   ||| |  || ||| || |  ||||||||||||| |||||| |||    
T  17240730 tcctaatttccttcaaattctgatcacagcaacattatagattaataaatcattttgaacactaaattaaaatacgttaaacatgattcttacaccattc 17240631  T
Q  133 -tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaaga 231  Q
     ||||||||| ||  ||| |||||||||| |||||||||| ||||||||| ||||  |||||| ||||||||||||||||  |||||||| ||||| |||    
T  17240630 ctttcaaaatcagcatca-accctaattcccaatttttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagaga 17240532  T
Q  232 taatcccaccct 243  Q
    || || ||||||    
T  17240531 tagtctcaccct 17240520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 10389515 - 10389451
Alignment:
Q  179 aactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||  |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  10389515 aactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccaccct 10389451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 10414604 - 10414540
Alignment:
Q  179 aactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||  |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  10414604 aactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccaccct 10414540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 10421274 - 10421210
Alignment:
Q  179 aactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||  |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  10421274 aactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccaccct 10421210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 243
Target Start/End: Complemental strand, 13302455 - 13302248
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc-t 133  Q
    ||||||||||||||||||  | || | ||||||||||  ||||||||  |||| ||| | |||||||||||| ||||||||  |||| |||||| ||| |    
T  13302455 ctaatttcattccaattctgatcacaacaacattataagttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcct 13302356  T
Q  134 ttcaaaatgagtctcataccctaa-ttctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagat 232  Q
    ||| || | |   ||| ||||||| ||| | ||||| |||||||||||| || | ||| ||||||||||||||||||| | |||| ||| ||||||||||    
T  13302355 ttcgaagtcatcatca-accctaaattccccatttt-atcttcaagaacaatgcattt-gattaattttcagaaattacatattatgattattgaaagat 13302259  T
Q  233 aatcccaccct 243  Q
    |||| ||||||    
T  13302258 aatctcaccct 13302248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 243
Target Start/End: Complemental strand, 13324003 - 13323795
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc-t 133  Q
    ||||||||||||||||||  | || | ||||||||||  ||||||||  |||| ||| | |||||||||||| ||||||||  |||| |||||| ||| |    
T  13324003 ctaatttcattccaattctgatcacaacaacattataagttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcct 13323904  T
Q  134 ttcaaaatgagtctcataccctaa-ttctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagat 232  Q
    ||| || | |   ||| ||||||| ||| ||||||| |||||||||||| ||    || ||||||||||||||||||| | |||| ||| ||||||||||    
T  13323903 ttcgaagtcatcatca-accctaaattcccaatttt-atcttcaagaacaatctaatttgattaattttcagaaattacatattatgattattgaaagat 13323806  T
Q  233 aatcccaccct 243  Q
    |||| ||||||    
T  13323805 aatctcaccct 13323795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 12033503 - 12033452
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  12033503 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 12033452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 17131728 - 17131779
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  17131728 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 17131779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 243
Target Start/End: Complemental strand, 13313111 - 13312904
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc-t 133  Q
    ||||||||||||||||||  | || | ||||||||||  ||||||||  |||| ||| | |||||||||||| ||||||||  |||| |||||| ||| |    
T  13313111 ctaatttcattccaattctgatcacaacaacattataagttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcct 13313012  T
Q  134 ttcaaaatgagtctcataccctaa-ttctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagat 232  Q
    ||| || | |   ||| ||||||| ||| | ||||| |||||||||||| || | ||| |||||||||||| |||||| | |||| ||| ||||||||||    
T  13313011 ttcgaagtcatcatca-accctaaattccctatttt-atcttcaagaacaatccattt-gattaattttcaaaaattacatattatgattattgaaagat 13312915  T
Q  233 aatcccaccct 243  Q
    |||| ||||||    
T  13312914 aatctcaccct 13312904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 14865842 - 14865893
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||| | |||| ||  |||||||||||||||||||||    
T  14865842 gattaattttcagaaattacatattatgactattgaaagataatcccaccct 14865893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 196 - 15
Alignment:
Q  62 caacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattc 160  Q
    |||| ||||||||||||||||||| | ||| |  || ||| |||  |||||||||||||| |||||| ||| ||||||||| ||   || ||||||||||    
T  196 caacgttatagattaagaaatcattctgaacactaaattaaaactcattaaacatgattcttacaccattcctttcaaaatcagcaaca-accctaattc 98  T
Q  161 tcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
     |||||||||| ||||||||| ||||  |||||| ||||||||||||||||  |||||||| ||||| ||||| || ||||||    
T  97 ccaatttttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcaccct 15  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 13546 - 13680
Alignment:
Q  109 ttaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattttcagaaa 207  Q
    ||||||||||||| |||||| ||| ||||||||| ||  ||| |||||||||| |||||||||| ||||||||| ||||  |||||| ||||||||||||    
T  13546 ttaaacatgattcttacaccattcctttcaaaatcagcatca-accctaattcccaatttttattttcaagaacaattcaattagatcaattttcagaaa 13644  T
Q  208 ttatacattaagatcattgaaagataatcccaccct 243  Q
    ||||  |||||||| ||||| ||||| || ||||||    
T  13645 ttatgtattaagattattgagagatagtctcaccct 13680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 243
Target Start/End: Original strand, 135312 - 135521
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacc-tttct 133  Q
    |||||||||||| |||||  | || | |||||||||||||||||||||||| | ||| ||||| |||||||| |||||||||||| | |||||| || ||    
T  135312 ctaatttcattcaaattctgatcacaacaacattatagattaagaaatcattctgaacatcaaattacaacacattaaacatgatccttacaccattcct 135411  T
Q  134 ttcaaaatgagtctcataccctaa-ttctcaatttttatcttcaagaactattc-ttttagattaattttcagaaattatacattaagatcattgaaaga 231  Q
    |||||||| ||  ||| ||||||| ||| ||||||||||| |||||||| |||| | ||| |  ||||||||||||||||| | || ||| ||||| |||    
T  135412 ttcaaaatcagcatca-accctaatttcccaatttttatc-tcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagaga 135509  T
Q  232 taatcccaccct 243  Q
    || || ||||||    
T  135510 tagtctcaccct 135521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 116763 - 116944
Alignment:
Q  62 caacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattc 160  Q
    |||||||||||||||||||||||| | ||| |  ||     |||| |||||||||||||| |||||| ||| ||||||||| ||  ||| ||||||||||    
T  116763 caacattatagattaagaaatcattctgaacacgaaaactaaacacattaaacatgattcttacaccattcctttcaaaatcagcatca-accctaattc 116861  T
Q  161 tcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    | ||||||||| ||||||||| ||||  |||||| ||||||||||||||||| | || ||| ||||| ||||| || ||||||    
T  116862 taaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcaccct 116944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 243
Target Start/End: Complemental strand, 40748 - 40539
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacc-tttct 133  Q
    |||||||||||| |||||  | || | |||||||||||||||||||||||| | ||| ||||| ||||||||  ||||||||||| | |||||| || ||    
T  40748 ctaatttcattcaaattctgatcacatcaacattatagattaagaaatcattctgaacatcaaattacaacacgttaaacatgatccttacaccattcct 40649  T
Q  134 ttcaaaatgagtctcataccctaa-ttctcaatttttatcttcaagaactattc-ttttagattaattttcagaaattatacattaagatcattgaaaga 231  Q
    |||||||| ||  ||| ||||||| ||| ||||||||||| |||||||| |||| | ||| |  ||||||||||||||||| | || ||| ||||| |||    
T  40648 ttcaaaatcagcatca-accctaatttcccaatttttatc-tcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagaga 40551  T
Q  232 taatcccaccct 243  Q
    || || ||||||    
T  40550 tagtctcaccct 40539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 16687 - 16868
Alignment:
Q  62 caacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattc 160  Q
    |||||||||||||||||||||||| | ||| |  ||     |||| |||||||||||||| || ||| ||| ||||||||| ||  ||| ||||||||||    
T  16687 caacattatagattaagaaatcattctgaacacgaaaactaaacacattaaacatgattcttaaaccattcctttcaaaatcagcatca-accctaattc 16785  T
Q  161 tcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
     |||||||||| ||||||||| ||||  |||||| ||||||||||||||||| | || ||| ||||| ||||| || ||||||    
T  16786 ccaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcaccct 16868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 243
Target Start/End: Complemental strand, 23482200 - 23482060
Alignment:
Q  103 aacatattaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaatttt 201  Q
    |||| |||||||||||||| |||||| | | ||||||||| ||  ||| |||||||||| |||||||||| ||||||||| ||||  |||||| ||||||    
T  23482200 aacacattaaacatgattcttacaccatccctttcaaaatcagcatca-accctaattcccaatttttattttcaagaacaattcaattagatcaatttt 23482102  T
Q  202 cagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||| | || ||| ||||| ||||| || ||||||    
T  23482101 cagaaattatatactatgattattgagagatagtctcaccct 23482060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 29643480 - 29643393
Alignment:
Q  155 taattctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    |||||||||||||| ||||||| |||| ||||  || ||||||||||||||||||| | |||| ||| |||||||||||||| ||||||    
T  29643480 taattctcaatttt-atcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctcaccct 29643393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 18614229 - 18614320
Alignment:
Q  151 accctaattctcaatttttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    |||||||||||||||||| |||||||||||| ||||  || ||| ||||||||||||||||| || | ||| ||||| ||||| || ||||||    
T  18614229 accctaattctcaatttt-atcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcaccct 18614320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 24320729 - 24320678
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  24320729 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 24320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 14056751 - 14056696
Alignment:
Q  62 caacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatg 117  Q
    |||||||||||||||||||||||| | ||| ||| | |||||||| ||||||||||    
T  14056751 caacattatagattaagaaatcattctgaacatcgaattacaacacattaaacatg 14056696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 217
Target Start/End: Original strand, 19750457 - 19750572
Alignment:
Q  103 aacatattaaacatgattcatacacctttctttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattc-ttttagattaatttt 201  Q
    |||||| | |||||||||| || || |||||||||||||  || |   ||||||||||||||||||||| | ||||||| |||| | | | |||||||||    
T  19750457 aacataattaacatgattcctatacttttctttcaaaatcggtatagaaccctaattctcaatttttatttccaagaacaattcatgtaaaattaatttt 19750556  T
Q  202 cagaaattatacatta 217  Q
    ||||||| ||| ||||    
T  19750557 cagaaatcatatatta 19750572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 29643574 - 29643530
Alignment:
Q  62 caacattatagattaagaaatcatacagaatatcaatttacaaca 106  Q
    |||||||||||||||||||||||||| ||| | ||| ||||||||    
T  29643574 caacattatagattaagaaatcatactgaacaccaaattacaaca 29643530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 1301 - 1434
Alignment:
Q  110 taaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattcttttagattaattttcagaaat 208  Q
    ||||||| |||| |||||| ||| ||||||||| ||  ||| ||||||||||||| |||| ||| |||||||| |||   |||||| |||||||| ||||    
T  1301 taaacataattcttacaccattcctttcaaaatcagcatcaaaccctaattctcagtttt-atcatcaagaacaatttaattagatcaattttcaaaaat 1399  T
Q  209 tatacattaagatcattgaaagataatcccaccct 243  Q
    |||| || | ||||||||||||||| || ||||||    
T  1400 tatatatcatgatcattgaaagatagtctcaccct 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 243
Target Start/End: Complemental strand, 22808 - 22600
Alignment:
Q  35 ctaatttcattccaattcataacatagcaacattatagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacc-tttct 133  Q
    |||||||||||| ||||| || || | |||  ||||||||||||||| |||   ||| | ||| |||||||| |||||||||||||| |||||| || ||    
T  22808 ctaatttcattcaaattcttatcacaacaatgttatagattaagaaaccattttgaacaccaaattacaacacattaaacatgattcttacaccattcct 22709  T
Q  134 ttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattc-ttttagattaattttcagaaattatacattaagatcattgaaagat 232  Q
    |||| ||| ||  ||| |||||||||| ||||||||||| |||||||| |||| | ||| |   |||||||||||||||| | || ||| ||||| ||||    
T  22708 ttcagaatcagcatca-accctaattcccaatttttatc-tcaagaacaattcatgttaaaacgattttcagaaattatatactatgattattgagagat 22611  T
Q  233 aatcccaccct 243  Q
    | || ||||||    
T  22610 agtctcaccct 22600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 135313 - 135478
Alignment:
Q  69 atagattaagaaatcatacagaatatcaatttacaacatattaaacatgattcatacacc-tttctttcaaaatgagtctcataccctaattctcaattt 167  Q
    |||||||||||||||||||  || ||||| |||||||| | ||||| |||||| |||||| ||||||||||||| |   | |  || |||||||||| ||    
T  135313 atagattaagaaatcatac-taacatcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaattctcaa-tt 135410  T
Q  168 ttatcttcaagaactattcttttagattaattttcagaaattatacattaagatcattgaaagataatc 236  Q
    ||| ||| ||||||  |||  || ||||||||||||||||||||| |||| ||  ||||||||||||||    
T  135411 ttacctttaagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatc 135478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 1971 - 1920
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  1971 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 9332 - 9383
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  9332 gattaattttcagaaattatatattatgactattgaaagataatcccaccct 9383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 1546 - 1492
Alignment:
Q  189 ttagattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    |||||||||||||||||||||  | ||||||||||||| ||||||||| ||||||    
T  1546 ttagattaattttcagaaattgcatattaagatcattgcaagataatctcaccct 1492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 69658 - 69794
Alignment:
Q  108 attaaacatgattcatacacctttc-tttcaaaatgagtctcataccctaattctcaatttttatcttcaagaactattctt-ttagattaattttcaga 205  Q
    |||||||||||||| ||||| |||| |||||||||  | ||   |||||||||| |||| ||||||| ||||||| |||| | ||| |||  |||||| |    
T  69658 attaaacatgattcctacacttttcctttcaaaatcggcctagaaccctaattcccaatctttatct-caagaacaattcatgttaaattttttttcata 69756  T
Q  206 aattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||| ||||||||||||||||| || || ||||||    
T  69757 aattatatattaagatcattgaaagttagtctcaccct 69794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 79549 - 79498
Alignment:
Q  192 gattaattttcagaaattatacattaagatcattgaaagataatcccaccct 243  Q
    ||||||||||||||||||| | |||| ||  |||||||||||||||||||||    
T  79549 gattaattttcagaaattacatattatgactattgaaagataatcccaccct 79498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 2728 - 2651
Alignment:
Q  151 accctaattctcaatttttatcttcaagaactattc-ttttagattaattttcagaaattatacattaagatcattga 227  Q
    |||||||||||||||| |||| ||||||||| |||| | ||| || ||||||||||| ||||| ||||  ||||||||    
T  2728 accctaattctcaattcttattttcaagaacaattcatgttaaatcaattttcagaagttatatattataatcattga 2651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 15096 - 15020
Alignment:
Q  151 accctaattctcaatttttatcttcaagaactattctt-ttagattaattttcagaaattatacattaagatcattga 227  Q
    |||||||||| |||| ||||||| ||||||| |||| | ||| |  ||||||||||||||||| ||||||||||||||    
T  15096 accctaattcccaatctttatct-caagaacaattcatgttaaaacaattttcagaaattatatattaagatcattga 15020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 1453 - 1481
Alignment:
Q  199 tttcagaaattatacattaagatcattga 227  Q
    |||||||||||||||||||||||||||||    
T  1453 tttcagaaattatacattaagatcattga 1481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University