View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7239_high_20 (Length: 220)
Name: NF7239_high_20
Description: NF7239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7239_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 477638 - 477830
Alignment:
| Q |
1 |
caatgcgagaatgccaatgaagcaaaggtagagatgcaatcactttttgccgatgtttcattaatttgaccaattggatatatataacgaagcctcatcc |
100 |
Q |
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| T |
477638 |
caatgcaagaatgccaatgaagcaaaggtagagatgcaatcactttttgccgatgtttcattaatttgaccaattggatatatataacgaagcctcatcc |
477737 |
T |
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| Q |
101 |
gcttagtggatgcggctacatggatctcgagatgcaagaatccctattatgatttaactttaaaagataaattatttacctccgaatctatgt |
193 |
Q |
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| T |
477738 |
gattagtggatgcggctacatggatctcgagatgcaagaatccctattatgatttaactttaaaagataaattatttacctccgaatctatgt |
477830 |
T |
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