View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7240_low_41 (Length: 237)
Name: NF7240_low_41
Description: NF7240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7240_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 46090645 - 46090861
Alignment:
| Q |
1 |
tgcaggtactatcttgtcttatctgccatttaattgctgcagttacaattcaatttcattaatgtaaacgaaattcgaattacannnnnnnnggaccact |
100 |
Q |
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||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
46090645 |
tgcaggtactaccttgtcttatctgccatttaatagttgcagttacaattcaatttcattaatgtaaacgaaattcgaattacattttttttggaccact |
46090744 |
T |
|
| Q |
101 |
tgtgatttttaaaataatatttgaatattgtttnnnnnnnnnctcttaaattgcagacactgcatgatcttataccatgcgactttaatt-gattaagaa |
199 |
Q |
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|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
46090745 |
tgtgatttttaaaataatatttgaatattgtttaaaaaaaaactcttaaattgcagacactgcatgatcttataccatgcgactttaattggattaagaa |
46090844 |
T |
|
| Q |
200 |
gcttggacccttcacat |
216 |
Q |
| |
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||||||||||||||||| |
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| T |
46090845 |
gcttggacccttcacat |
46090861 |
T |
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