View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7241_low_15 (Length: 384)

Name: NF7241_low_15
Description: NF7241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7241_low_15
NF7241_low_15
[»] chr2 (4 HSPs)
chr2 (1-137)||(18929752-18929887)
chr2 (1-141)||(17403238-17403377)
chr2 (39-109)||(25519999-25520068)
chr2 (4-44)||(26651360-26651400)
[»] chr3 (6 HSPs)
chr3 (1-142)||(9033046-9033188)
chr3 (1-141)||(4770169-4770307)
chr3 (1-112)||(4765286-4765396)
chr3 (1-44)||(15687377-15687420)
chr3 (1-42)||(16242605-16242646)
chr3 (4-44)||(29614037-29614077)
[»] chr6 (4 HSPs)
chr6 (1-141)||(17525306-17525444)
chr6 (1-111)||(31125745-31125854)
chr6 (1-138)||(22394009-22394142)
chr6 (1-44)||(16177713-16177759)
[»] chr8 (4 HSPs)
chr8 (8-156)||(28371558-28371705)
chr8 (4-45)||(23539981-23540022)
chr8 (1-42)||(10662146-10662187)
chr8 (1-141)||(22713164-22713303)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-141)||(373696-373834)
[»] chr5 (6 HSPs)
chr5 (1-114)||(20064063-20064173)
chr5 (1-45)||(25951739-25951783)
chr5 (1-44)||(19217727-19217770)
chr5 (5-44)||(20058300-20058339)
chr5 (1-45)||(21165611-21165655)
chr5 (2-47)||(23209772-23209817)
[»] chr7 (3 HSPs)
chr7 (1-57)||(2545808-2545864)
chr7 (10-46)||(2563197-2563233)
chr7 (1-44)||(4173104-4173147)
[»] chr1 (3 HSPs)
chr1 (1-156)||(22619579-22619732)
chr1 (1-44)||(11013493-11013536)
chr1 (1-41)||(20146646-20146686)
[»] chr4 (2 HSPs)
chr4 (1-45)||(11362116-11362160)
chr4 (1-78)||(10071002-10071078)
[»] scaffold0795 (1 HSPs)
scaffold0795 (1-44)||(5725-5768)
[»] scaffold0555 (1 HSPs)
scaffold0555 (3-37)||(5337-5371)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-37)||(5352-5388)


Alignment Details
Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 18929752 - 18929887
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||| |||||||||| ||||||| |||| ||||||||||||    
T  18929752 atgttcaccacattaaatgaggttggtgaaaataccagctaacaaatttcccctcaa-aaatgtcattttcgactgaatatattcaaaggagagaattga 18929850  T
Q  101 catttttgagaaaacgctaagtatttcaaagcatgat 137  Q
    ||||||||||||||| |||||||||||||||||||||    
T  18929851 catttttgagaaaactctaagtatttcaaagcatgat 18929887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 17403238 - 17403377
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||| |||   || |||||||||||| |||  || ||  || | |||||  |||||    
T  17403238 atgttgaccacattaaatgaggctggtaaaattaccagctaaaaaatttcccaaaaaaaaatgccatttttgactaaagattttcgaaggagaagattga 17403337  T
Q  101 catttttgagaaaacgctaagtatttcaaagcatgatgtca 141  Q
    ||||||| || |||| |||||||||||||||||||||||||    
T  17403338 catttttcag-aaactctaagtatttcaaagcatgatgtca 17403377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 25520068 - 25519999
Alignment:
Q  39 ctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttga 109  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||||| | ||||| ||||| |||||||||    
T  25520068 ctaacaaattgccacccaa-aaatgccattttcgactgaatataatcgaaggagataattggcatttttga 25519999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 26651360 - 26651400
Alignment:
Q  4 ttgaccacattaaatgaggctggtgaaaataccagctaaca 44  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  26651360 ttgaccacattaaatgaggctggtgaaattacctgctaaca 26651400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9033188 - 9033046
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaatt--gccccccaagaaatgccattttcgacggaatataatcaacggagagaatt 98  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||||| |||||||||||| |||| |||||    
T  9033188 atgttgaccatattaaatgaggctggtgaaaataccagctaacaaattgggacccccaa-aaatgccattttcgactgaatataatcaaaggagggaatt 9033090  T
Q  99 gacatttttgagaaaacgctaagtatttcaaagcatgatgtcac 142  Q
    | |||||||| |||||    ||||||| ||||||||||||||||    
T  9033089 ggcatttttgggaaaaattaaagtattccaaagcatgatgtcac 9033046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 4770169 - 4770307
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    |||||| |||||||||| ||| ||| | ||| ||||||||||||| || ||||||  ||||||||||||||||| |||| || || | |||||||||||     
T  4770169 atgttggccacattaaacgagtctgttaaaattaccagctaacaatttacccccct-gaaatgccattttcgactgaatctattcgaaggagagaattgg 4770267  T
Q  101 catttttgagaaaacgctaagtatttcaaagcatgatgtca 141  Q
    ||||||| || |||| |||||||||||||||||||||||||    
T  4770268 cattttttag-aaactctaagtatttcaaagcatgatgtca 4770307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 4765396 - 4765286
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||||||| | |||||| |||||||||||||||| ||| | | |  | |||||||||||     
T  4765396 atgttgatcacattaaatgaggctggtgaaaattccaactaacaaattacaccccaa-aaatgccattttcgactgaacaaattagaaggagagaattgg 4765298  T
Q  101 catttttgagaa 112  Q
     |||||||||||    
T  4765297 tatttttgagaa 4765286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15687377 - 15687420
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaaca 44  Q
    ||||||||||||||||||||||||||||||  ||||||||||||    
T  15687377 atgttgaccacattaaatgaggctggtgaacttaccagctaaca 15687420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16242646 - 16242605
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaa 42  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  16242646 atgttgaccacattaaatgaggttgatgaaaataccagctaa 16242605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 29614077 - 29614037
Alignment:
Q  4 ttgaccacattaaatgaggctggtgaaaataccagctaaca 44  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  29614077 ttgaccacattaaatgaggctagtgaaaatagcagctaaca 29614037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 17525306 - 17525444
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| |||||||||  |||||| |||| |||||||||       
T  17525306 atgttgaccacattaaatgagactggtgaaattaccagctaacaaattgccccccaa-aaatgctattttcgacaaaatatattcaaaggagagaatcag 17525404  T
Q  101 catttttgagaaaacgctaagtatttcaaagcatgatgtca 141  Q
     |||||||| ||||| |||||||||| ||||||||||||||    
T  17525405 aatttttga-aaaactctaagtatttaaaagcatgatgtca 17525444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 31125854 - 31125745
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||  |||||| || ||||||| |||| |||||||||||     
T  31125854 atgttgaccacattaaatgaggatggtgaaaatatcagctaaaaaattgccccctaa-aaatgaaattttctactgaatatattcaaaggagagaattgg 31125756  T
Q  101 catttttgaga 111  Q
    |||||||||||    
T  31125755 catttttgaga 31125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22394142 - 22394009
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    |||||||||||||||||  |||||||||||| ||||| |||||| |||||||||||| ||||| ||||||||||  ||| || |  | ||||| |||||     
T  22394142 atgttgaccacattaaa--aggctggtgaaattaccaactaacagattgccccccaa-aaatgtcattttcgacaaaatctatttgaaggagataattgg 22394046  T
Q  101 catttttgagaaaacgctaagtatttcaaagcatgatg 138  Q
     ||||||||| |||| ||||||||| || |||||||||    
T  22394045 aatttttgag-aaactctaagtattccagagcatgatg 22394009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16177713 - 16177759
Alignment:
Q  1 atgttgaccacattaaatgaggct---ggtgaaaataccagctaaca 44  Q
    ||||| ||||||||||||||||||   ||||||||||||||||||||    
T  16177713 atgttaaccacattaaatgaggctggaggtgaaaataccagctaaca 16177759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 28371558 - 28371705
Alignment:
Q  8 ccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacattttt 107  Q
    ||||||||||| | ||| |||||||||||| ||||||||||||| || || |||||  ||||||||| ||||| | ||||  ||||||||||||||||||    
T  28371558 ccacattaaattatgctagtgaaaataccaactaacaaattgccaccaaa-aaatgttattttcgactgaatacattcaaaagagagaattgacattttt 28371656  T
Q  108 gagaaaacgctaagtatttcaaagcatgatgtcacaattatcatgactt 156  Q
    |||||||| ||| ||||| ||||||||||||||||  | ||||||||||    
T  28371657 gagaaaactctatgtattccaaagcatgatgtcactctaatcatgactt 28371705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 23540022 - 23539981
Alignment:
Q  4 ttgaccacattaaatgaggctggtgaaaataccagctaacaa 45  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  23540022 ttgaccacattaaatgaggctggtgacaatacgagctaacaa 23539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10662146 - 10662187
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaa 42  Q
    ||||||||||||||||||||| ||||||||| || |||||||    
T  10662146 atgttgaccacattaaatgagtctggtgaaattatcagctaa 10662187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 22713303 - 22713164
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    ||||||||  ||||||| ||| ||| | ||| |||  ||| |||||||||||||  | ||||| |||||||||| ||| ||  |||| | |||  ||||     
T  22713303 atgttgactgcattaaacgagcctgttaaaactacaggcttacaaattgcccccacaaaaatgtcattttcgactgaaaattttcaaagaagaatattgg 22713204  T
Q  101 catttttgagaaaacgctaagtatttcaaagcatgatgtca 141  Q
     |||||||| ||||| |||||||||||||||||||| ||||    
T  22713203 aatttttga-aaaactctaagtatttcaaagcatgacgtca 22713164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 373834 - 373696
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    |||||||||||||||||||||| |||| |||  |||| ||||||||||||||||||| ||| ||||||||||||  ||  |  |  | | |||||||||     
T  373834 atgttgaccacattaaatgaggttggtaaaataaccaactaacaaattgccccccaa-aaaagccattttcgacttaaattttttgaagaagagaattgt 373736  T
Q  101 catttttgagaaaacgctaagtatttcaaagcatgatgtca 141  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  373735 catttttga-aaaactctaagtatttcaaagcatgatgtca 373696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 20064173 - 20064063
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||  ||   || |||| |||||| |||||    
T  20064173 atgttgaccacattaaacgaggctggtgaaaataacagctaacaaattgtcccccaa-aaatgtcattttcgaatga--ctactcaaaggagaggattga 20064077  T
Q  101 catttttgagaaaa 114  Q
    |||||||| |||||    
T  20064076 catttttgggaaaa 20064063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25951739 - 25951783
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25951739 atgttgaccacattaaatgaggctggtgaaaataccagctaacaa 25951783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19217770 - 19217727
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaaca 44  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  19217770 atgttgaccacattaaatgaggctggtgaaattaccagctaaca 19217727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 20058339 - 20058300
Alignment:
Q  5 tgaccacattaaatgaggctggtgaaaataccagctaaca 44  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  20058339 tgaccacattaaatgaggctggtgaaaatatcagctaaca 20058300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21165611 - 21165655
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaa 45  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||    
T  21165611 atgttgaccacattaagtgaggctggtaaaaatactagctaacaa 21165655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 23209817 - 23209772
Alignment:
Q  2 tgttgaccacattaaatgaggctggtgaaaataccagctaacaaat 47  Q
    ||||||||||||||| ||||||||||| ||||| ||||||| ||||    
T  23209817 tgttgaccacattaattgaggctggtgcaaataacagctaataaat 23209772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2545808 - 2545864
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaa 57  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2545808 atgttgaccacattaaatgaggctggtgaaattaccagctaacaaattgcctcccaa 2545864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 2563197 - 2563233
Alignment:
Q  10 acattaaatgaggctggtgaaaataccagctaacaaa 46  Q
    |||||||||||||||||||||| ||||||||||||||    
T  2563197 acattaaatgaggctggtgaaattaccagctaacaaa 2563233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4173147 - 4173104
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaaca 44  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||    
T  4173147 atgttgaacacattaaataaggcaggtgaaaataccagctaaca 4173104  T

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Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 22619732 - 22619579
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 100  Q
    ||||||||||||||||||||| ||  || |||||   |||||||||||||| ||||| ||||| |||||||||| ||||| | || | ||||| |||||     
T  22619732 atgttgaccacattaaatgagccttttggaaatataggctaacaaattgcctcccaa-aaatgtcattttcgactgaatacattcgaaggagataattgg 22619634  T
Q  101 catttttgagaaaacgctaagtatttcaaagcatgatgtcacaattatcatgactt 156  Q
     | |||||| |||||  |||||||||||||||||||||||| | | ||||||||||    
T  22619633 taattttga-aaaactataagtatttcaaagcatgatgtcatattaatcatgactt 22619579  T

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Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11013536 - 11013493
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaaca 44  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||    
T  11013536 atgttgaccacattaaatgaggctgatgaaattaccagctaaca 11013493  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20146646 - 20146686
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagcta 41  Q
    |||||| |||||||||||||| |||||||| ||||||||||    
T  20146646 atgttggccacattaaatgagactggtgaatataccagcta 20146686  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11362116 - 11362160
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaa 45  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  11362116 atgttgaccactttaaatgaggctggtgaaaataccagctaacaa 11362160  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10071002 - 10071078
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaa 78  Q
    |||||||||| |||||||||| |||  |||| |||  ||||||||| | |||||||| |||||| |||||||||||||    
T  10071002 atgttgaccatattaaatgagcctgtcgaaattacaggctaacaaaattccccccaa-aaatgcaattttcgacggaa 10071078  T

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Target: scaffold0795 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5768 - 5725
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaataccagctaaca 44  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||    
T  5768 atgttgaccgcattaaatgaggttggtaaaaataccagctaaca 5725  T

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Target: scaffold0555 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 5371 - 5337
Alignment:
Q  3 gttgaccacattaaatgaggctggtgaaaatacca 37  Q
    |||||||||| ||||||||||||||||||||||||    
T  5371 gttgaccacaataaatgaggctggtgaaaatacca 5337  T

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Target: scaffold0161 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5352 - 5388
Alignment:
Q  1 atgttgaccacattaaatgaggctggtgaaaatacca 37  Q
    |||||||||||||||||||| |||||||||| |||||    
T  5352 atgttgaccacattaaatgatgctggtgaaattacca 5388  T

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