View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7241_low_8 (Length: 491)
Name: NF7241_low_8
Description: NF7241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7241_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 448; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 10 - 481
Target Start/End: Original strand, 34186866 - 34187337
Alignment:
| Q |
10 |
atggacatcattcacacgaagagcaagtgctgaaagtaactcaagatgagacaagtgctggccgtagccgcggaagaggtggctttcgaggtggagctac |
109 |
Q |
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| T |
34186866 |
atggacataattcacacgaagagcaagtgctgaaagtaactcaagatgagacaagtgctggccgtagccgcggaagaggtggctttcgaggtggagctac |
34186965 |
T |
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| Q |
110 |
tcgaggaagaggcagaggaggtagaggaggaaaggcagcagtggagtgttattattgccatgagtttggacatttccagtatgaatgcccaaataaaccc |
209 |
Q |
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| T |
34186966 |
tcgaggaagaggcaaaggaggtagaggaggaaaggcagcagtggagtgttattattgccatgagtttggacatttccagtatgaatgcccaaataaaccc |
34187065 |
T |
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| Q |
210 |
ctgaacaacaccgcaaattatgctgagaccaacgaggaagcagtgctactcatggcacaactttcatcagatggagaatcaaatacacaagacatgtggt |
309 |
Q |
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| T |
34187066 |
ctgaacaacaccgcaaattatgttgagaccaacgaggaagcaatgctactcatggcacaactttcatcagatggagaatcaaatacacaagacatgtggt |
34187165 |
T |
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| Q |
310 |
tcatcgattcaggctgtagcaaccatatgacaggtagaaaggactggttttcttcacttgatgcttctttttgtgatgaggtaaaattaggaaataatta |
409 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34187166 |
tcatcgattcaggctgcagcaaccatatgacaggtagaaaggactggttttcttcacttgatgcttctttttgtgatgaggtaaaattaggaaataatta |
34187265 |
T |
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| Q |
410 |
tgctcttaaggtcaatgggaagggtgttgtcaaacttttgattaatggagttatgcatttggtgaatgatgt |
481 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
34187266 |
tgctcttaaggtcaatgggaagggtgttgtcaaacttttgattaatggagttatgcattttgtgaatgatgt |
34187337 |
T |
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