View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7241_low_9 (Length: 481)

Name: NF7241_low_9
Description: NF7241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7241_low_9
NF7241_low_9
[»] chr5 (42 HSPs)
chr5 (162-476)||(7742728-7743042)
chr5 (1-98)||(7742596-7742692)
chr5 (197-431)||(26070461-26070695)
chr5 (196-409)||(20694649-20694862)
chr5 (169-407)||(24517365-24517595)
chr5 (307-431)||(23157792-23157916)
chr5 (204-401)||(24410830-24411027)
chr5 (186-431)||(19331498-19331742)
chr5 (304-432)||(18222479-18222607)
chr5 (169-406)||(19763751-19763993)
chr5 (167-401)||(16634063-16634298)
chr5 (196-407)||(20083476-20083689)
chr5 (169-401)||(16622542-16622765)
chr5 (186-396)||(17027549-17027759)
chr5 (196-400)||(11274222-11274428)
chr5 (173-406)||(24841765-24841998)
chr5 (325-407)||(17382057-17382139)
chr5 (186-395)||(25594574-25594784)
chr5 (306-395)||(25680619-25680708)
chr5 (187-400)||(18178120-18178333)
chr5 (169-400)||(26329935-26330165)
chr5 (325-399)||(24268574-24268648)
chr5 (325-399)||(24345203-24345277)
chr5 (304-401)||(15205660-15205757)
chr5 (169-265)||(30072269-30072365)
chr5 (325-432)||(15697358-15697465)
chr5 (167-265)||(18452675-18452773)
chr5 (306-408)||(22967845-22967947)
chr5 (188-407)||(12339899-12340118)
chr5 (186-294)||(22229929-22230036)
chr5 (345-409)||(25942150-25942214)
chr5 (344-407)||(23137471-23137534)
chr5 (322-431)||(24130642-24130751)
chr5 (304-402)||(16603614-16603713)
chr5 (186-285)||(23157686-23157785)
chr5 (186-358)||(25367654-25367825)
chr5 (384-432)||(22643945-22643993)
chr5 (355-431)||(24846248-24846324)
chr5 (196-243)||(17695355-17695402)
chr5 (329-431)||(30790768-30790865)
chr5 (214-294)||(17381954-17382034)
chr5 (4-104)||(18178458-18178557)
[»] chr3 (36 HSPs)
chr3 (152-431)||(21828981-21829260)
chr3 (187-396)||(11474868-11475078)
chr3 (153-431)||(8402400-8402678)
chr3 (151-430)||(18474159-18474437)
chr3 (161-401)||(19219068-19219309)
chr3 (231-416)||(26297751-26297934)
chr3 (217-431)||(26387758-26387972)
chr3 (307-406)||(13911277-13911376)
chr3 (196-400)||(23908163-23908367)
chr3 (186-377)||(30493147-30493338)
chr3 (186-431)||(28422440-28422684)
chr3 (188-407)||(10341807-10342017)
chr3 (304-401)||(2729619-2729716)
chr3 (151-292)||(19542971-19543112)
chr3 (328-416)||(19285102-19285189)
chr3 (326-401)||(18065833-18065905)
chr3 (325-398)||(33577754-33577827)
chr3 (335-403)||(12409473-12409541)
chr3 (327-407)||(19263922-19264002)
chr3 (169-405)||(25883116-25883352)
chr3 (322-395)||(19546002-19546075)
chr3 (326-407)||(23007088-23007169)
chr3 (325-398)||(27374473-27374546)
chr3 (196-431)||(25188745-25188980)
chr3 (325-407)||(1475302-1475384)
chr3 (159-377)||(5632398-5632607)
chr3 (325-407)||(12573301-12573383)
chr3 (325-407)||(13549765-13549847)
chr3 (167-264)||(19263767-19263867)
chr3 (304-395)||(27415194-27415282)
chr3 (325-401)||(33914585-33914660)
chr3 (169-407)||(21017888-21018126)
chr3 (196-294)||(26418844-26418942)
chr3 (196-289)||(16970591-16970684)
chr3 (325-407)||(25919484-25919568)
chr3 (196-294)||(19285223-19285320)
[»] chr8 (36 HSPs)
chr8 (187-431)||(29291758-29292001)
chr8 (170-432)||(6888059-6888318)
chr8 (151-416)||(5153760-5154025)
chr8 (154-407)||(30543774-30544026)
chr8 (197-431)||(14424706-14424940)
chr8 (153-433)||(30850949-30851229)
chr8 (151-409)||(27097649-27097907)
chr8 (169-407)||(12956500-12956731)
chr8 (187-416)||(13583403-13583622)
chr8 (186-432)||(11437405-11437652)
chr8 (325-432)||(24584746-24584853)
chr8 (153-401)||(28291950-28292197)
chr8 (187-406)||(28902101-28902320)
chr8 (325-427)||(10866979-10867081)
chr8 (169-407)||(16052142-16052381)
chr8 (325-407)||(14977128-14977211)
chr8 (152-407)||(32239298-32239554)
chr8 (199-432)||(35135316-35135551)
chr8 (343-429)||(13530145-13530231)
chr8 (343-429)||(13619684-13619770)
chr8 (216-377)||(28074555-28074715)
chr8 (152-431)||(31436466-31436735)
chr8 (332-406)||(28901369-28901443)
chr8 (304-401)||(5570142-5570239)
chr8 (326-407)||(16054305-16054386)
chr8 (196-395)||(28260181-28260381)
chr8 (186-292)||(28859121-28859227)
chr8 (307-431)||(12774847-12774971)
chr8 (190-292)||(24696708-24696810)
chr8 (167-407)||(13081798-13082041)
chr8 (164-294)||(22894392-22894520)
chr8 (171-257)||(28901217-28901302)
chr8 (169-234)||(16054478-16054543)
chr8 (169-265)||(11310122-11310216)
chr8 (339-431)||(41505573-41505665)
chr8 (326-400)||(22894553-22894627)
[»] chr1 (41 HSPs)
chr1 (151-431)||(25126467-25126747)
chr1 (152-431)||(26102044-26102323)
chr1 (196-431)||(31313539-31313774)
chr1 (169-398)||(11769859-11770089)
chr1 (153-431)||(15298720-15298997)
chr1 (151-433)||(19257653-19257933)
chr1 (153-414)||(26854169-26854428)
chr1 (167-407)||(25494352-25494583)
chr1 (169-407)||(30675495-30675733)
chr1 (210-431)||(34381695-34381919)
chr1 (218-431)||(18795168-18795381)
chr1 (151-406)||(52271092-52271347)
chr1 (196-432)||(27461073-27461310)
chr1 (180-399)||(18300879-18301099)
chr1 (325-406)||(12810334-12810415)
chr1 (186-375)||(25727791-25727981)
chr1 (186-375)||(25736199-25736389)
chr1 (151-392)||(21548674-21548915)
chr1 (304-400)||(25266346-25266442)
chr1 (326-406)||(50047193-50047273)
chr1 (325-432)||(18391068-18391175)
chr1 (197-431)||(15416866-15417101)
chr1 (357-431)||(21550933-21551007)
chr1 (169-406)||(26657488-26657725)
chr1 (325-400)||(19884190-19884265)
chr1 (186-397)||(25730453-25730665)
chr1 (169-234)||(12423780-12423845)
chr1 (169-293)||(25373871-25373995)
chr1 (304-399)||(12423915-12424010)
chr1 (304-391)||(13807753-13807840)
chr1 (325-407)||(23223422-23223505)
chr1 (169-294)||(23519634-23519758)
chr1 (338-431)||(25373773-25373866)
chr1 (197-246)||(31319504-31319553)
chr1 (169-375)||(30781803-30782009)
chr1 (325-406)||(23519780-23519858)
chr1 (151-234)||(25665617-25665700)
chr1 (169-294)||(23223537-23223663)
chr1 (152-234)||(23505941-23506022)
chr1 (169-263)||(50047330-50047424)
chr1 (343-419)||(25965414-25965490)
[»] chr4 (41 HSPs)
chr4 (203-432)||(26159742-26159971)
chr4 (202-431)||(10576440-10576669)
chr4 (212-432)||(29437455-29437677)
chr4 (151-341)||(31859748-31859938)
chr4 (213-431)||(21167716-21167935)
chr4 (159-431)||(23353610-23353877)
chr4 (196-409)||(46647205-46647417)
chr4 (161-431)||(19601785-19602055)
chr4 (159-431)||(21077220-21077492)
chr4 (152-431)||(33519027-33519296)
chr4 (210-401)||(9288227-9288418)
chr4 (322-432)||(24925791-24925901)
chr4 (169-407)||(34864161-34864395)
chr4 (305-431)||(17339815-17339941)
chr4 (151-387)||(17187207-17187440)
chr4 (325-406)||(1676317-1676398)
chr4 (325-406)||(1682845-1682926)
chr4 (325-431)||(22119633-22119739)
chr4 (186-400)||(47024648-47024853)
chr4 (169-382)||(15192239-15192452)
chr4 (325-400)||(27302796-27302871)
chr4 (321-407)||(5906738-5906824)
chr4 (155-273)||(7024070-7024188)
chr4 (304-406)||(25315232-25315334)
chr4 (187-292)||(13064552-13064657)
chr4 (217-391)||(18444277-18444451)
chr4 (326-418)||(13275767-13275859)
chr4 (332-406)||(12111360-12111435)
chr4 (330-411)||(4732757-4732838)
chr4 (167-264)||(12111191-12111286)
chr4 (169-398)||(18898011-18898231)
chr4 (336-431)||(9783016-9783111)
chr4 (325-391)||(1695869-1695935)
chr4 (332-406)||(10320248-10320322)
chr4 (250-380)||(20044216-20044346)
chr4 (152-220)||(4732954-4733022)
chr4 (151-245)||(22119794-22119887)
chr4 (169-223)||(27302972-27303026)
chr4 (326-401)||(4953699-4953771)
chr4 (172-232)||(5906631-5906691)
chr4 (345-409)||(53001219-53001283)
[»] chr6 (32 HSPs)
chr6 (151-367)||(26499694-26499910)
chr6 (153-431)||(26512628-26512905)
chr6 (153-431)||(26517744-26518021)
chr6 (210-431)||(12972291-12972512)
chr6 (152-428)||(9942998-9943274)
chr6 (196-431)||(14924310-14924545)
chr6 (196-396)||(16439481-16439680)
chr6 (187-294)||(33638388-33638495)
chr6 (196-431)||(9396499-9396727)
chr6 (259-431)||(32930428-32930600)
chr6 (169-398)||(17860314-17860543)
chr6 (169-400)||(30355344-30355566)
chr6 (304-432)||(20495795-20495922)
chr6 (186-407)||(14768158-14768372)
chr6 (325-407)||(13759473-13759555)
chr6 (169-289)||(15575054-15575173)
chr6 (164-294)||(24507303-24507432)
chr6 (187-245)||(33638259-33638317)
chr6 (336-431)||(17198788-17198880)
chr6 (236-362)||(24617567-24617693)
chr6 (304-392)||(1755562-1755650)
chr6 (335-431)||(26518564-26518660)
chr6 (328-419)||(16387273-16387364)
chr6 (329-432)||(22262336-22262439)
chr6 (306-407)||(16527901-16528002)
chr6 (342-431)||(24507623-24507712)
chr6 (336-410)||(33638517-33638590)
chr6 (196-245)||(24618056-24618105)
chr6 (152-292)||(16387103-16387243)
chr6 (344-380)||(23946883-23946919)
chr6 (325-428)||(13835591-13835694)
chr6 (325-431)||(15574912-15575017)
[»] chr7 (45 HSPs)
chr7 (169-407)||(29544530-29544769)
chr7 (187-431)||(30405583-30405825)
chr7 (151-431)||(24596851-24597131)
chr7 (152-401)||(20461494-20461745)
chr7 (216-418)||(3268878-3269080)
chr7 (151-409)||(18496574-18496832)
chr7 (172-431)||(23124887-23125147)
chr7 (151-409)||(1074461-1074720)
chr7 (167-265)||(21545690-21545788)
chr7 (226-407)||(1255135-1255317)
chr7 (196-375)||(8308928-8309103)
chr7 (196-378)||(12358655-12358836)
chr7 (196-409)||(5312678-5312891)
chr7 (325-400)||(21545821-21545896)
chr7 (327-431)||(7956168-7956272)
chr7 (325-431)||(17881520-17881626)
chr7 (197-412)||(22532538-22532752)
chr7 (307-407)||(7372569-7372670)
chr7 (325-401)||(22067828-22067904)
chr7 (325-432)||(46054684-46054791)
chr7 (231-401)||(7142115-7142286)
chr7 (325-431)||(37144907-37145013)
chr7 (329-414)||(4977846-4977931)
chr7 (188-381)||(9801759-9801952)
chr7 (325-407)||(7361654-7361737)
chr7 (325-407)||(20470832-20470914)
chr7 (325-401)||(4828808-4828884)
chr7 (335-431)||(9755787-9755883)
chr7 (201-381)||(9761313-9761493)
chr7 (325-407)||(315196-315278)
chr7 (342-419)||(2353280-2353357)
chr7 (186-291)||(7494824-7494928)
chr7 (188-431)||(21471784-21472026)
chr7 (169-228)||(20017143-20017202)
chr7 (304-398)||(7815343-7815437)
chr7 (347-416)||(8606071-8606140)
chr7 (196-245)||(14649669-14649718)
chr7 (169-234)||(20446386-20446451)
chr7 (343-407)||(2351008-2351072)
chr7 (325-400)||(9066150-9066223)
chr7 (346-378)||(10253783-10253815)
chr7 (169-245)||(10670440-10670515)
chr7 (186-375)||(10292797-10292986)
chr7 (169-234)||(20470675-20470740)
chr7 (186-222)||(9070584-9070620)
[»] chr2 (41 HSPs)
chr2 (210-401)||(19541054-19541245)
chr2 (151-400)||(18236150-18236399)
chr2 (179-294)||(14921914-14922029)
chr2 (196-411)||(17152160-17152376)
chr2 (151-392)||(18818723-18818969)
chr2 (218-431)||(24047369-24047582)
chr2 (193-427)||(31261990-31262222)
chr2 (151-294)||(17415011-17415153)
chr2 (325-431)||(21843024-21843130)
chr2 (196-400)||(21505031-21505236)
chr2 (325-431)||(21844651-21844757)
chr2 (326-431)||(32276536-32276641)
chr2 (196-431)||(21848966-21849201)
chr2 (325-431)||(28278445-28278551)
chr2 (159-396)||(34063696-34063938)
chr2 (335-431)||(29647577-29647673)
chr2 (213-432)||(18116969-18117187)
chr2 (325-431)||(22388775-22388880)
chr2 (164-294)||(27417123-27417253)
chr2 (325-431)||(27918005-27918111)
chr2 (304-406)||(35031714-35031816)
chr2 (329-430)||(17415221-17415322)
chr2 (326-407)||(30998782-30998863)
chr2 (196-429)||(39730436-39730669)
chr2 (326-409)||(12363245-12363327)
chr2 (216-430)||(15454451-15454657)
chr2 (158-243)||(31274131-31274216)
chr2 (329-397)||(24187987-24188055)
chr2 (169-401)||(16593616-16593850)
chr2 (325-414)||(17240876-17240964)
chr2 (173-294)||(25474162-25474282)
chr2 (164-228)||(22525680-22525744)
chr2 (332-407)||(1733111-1733186)
chr2 (151-294)||(22511070-22511208)
chr2 (169-234)||(30998955-30999020)
chr2 (306-407)||(15829145-15829242)
chr2 (387-431)||(22525736-22525780)
chr2 (332-400)||(35707821-35707889)
chr2 (187-292)||(1732677-1732782)
chr2 (329-377)||(22510987-22511035)
chr2 (354-414)||(31449961-31450021)
[»] scaffold0190 (1 HSPs)
scaffold0190 (170-431)||(11564-11825)
[»] scaffold0011 (1 HSPs)
scaffold0011 (151-415)||(228034-228296)
[»] scaffold0171 (3 HSPs)
scaffold0171 (168-390)||(21425-21648)
scaffold0171 (169-290)||(6324-6444)
scaffold0171 (332-401)||(6213-6282)
[»] scaffold0043 (1 HSPs)
scaffold0043 (325-431)||(58732-58838)
[»] scaffold0188 (1 HSPs)
scaffold0188 (169-403)||(26820-27054)
[»] scaffold0185 (1 HSPs)
scaffold0185 (325-419)||(1442-1536)
[»] scaffold0282 (1 HSPs)
scaffold0282 (169-275)||(22479-22584)
[»] scaffold1149 (1 HSPs)
scaffold1149 (339-431)||(1772-1864)
[»] scaffold0650 (1 HSPs)
scaffold0650 (168-294)||(5634-5759)
[»] scaffold0337 (2 HSPs)
scaffold0337 (164-294)||(1933-2062)
scaffold0337 (342-431)||(1653-1742)
[»] scaffold0065 (2 HSPs)
scaffold0065 (164-294)||(12369-12498)
scaffold0065 (342-431)||(12089-12178)
[»] scaffold1026 (1 HSPs)
scaffold1026 (329-407)||(1859-1937)


Alignment Details
Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 162 - 476
Target Start/End: Original strand, 7742728 - 7743042
Alignment:
Q  162 gtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtg 261  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7742728 gtcttgaaacttgaaacgatttttcttcactttgtattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtg 7742827  T
Q  262 atgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaa 361  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7742828 atgttttgttttactgatttacatgatttctcattaaaaaaactcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaa 7742927  T
Q  362 tgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaatatgnnnnnnnnngactagaaacatagccaa 461  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||         ||||||||||||||||||    
T  7742928 cgaaaacaatacaaaatgttcttcaaaccattgacaactcgtctaaatgacttcttatctgccttcaaatatgaaaaaaaatgactagaaacatagccaa 7743027  T
Q  462 aaatatcatatgatg 476  Q
    |||||||||||||||    
T  7743028 aaatatcatatgatg 7743042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 7742596 - 7742692
Alignment:
Q  1 ttgaaaaacaagcaaacaacaaatttctgcctgcaagctatgtgcagggcacatgggtactcatgtaggggtgcatgaggtagtagccaaggctgcct 98  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7742596 ttgaaaaacaagcaaacaacaa-tttctgcctgcaagccatgtgcagggcacatgggtactcatgtaggggtgcatgaggtagtagccaaggctgcct 7742692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 197 - 431
Target Start/End: Complemental strand, 26070695 - 26070461
Alignment:
Q  197 attgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcatt 296  Q
    |||||||||||| ||||| || ||||||| |||||||| |||||||||| | ||| ||||| ||||||| ||||||| |  ||||||||||||||||| |    
T  26070695 attgtcttcaaaaaccttatacgaaccatagatcttcaatcttcatatccttgatccttcatgtgatgtcttgttttgccaatttacatgatttctcact 26070596  T
Q  297 nnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgac 396  Q
           |||||||||| ||||   || ||||||||| ||||||| |||||||||   ||||||||||||||||||| |||| ||| |||||  ||||||    
T  26070595 aaaaagactcaaaacacttatggagttgcatgatttatgataaaactgaattacattaactcgaatgaaaacaatactaaattttcctcaaatgattgac 26070496  T
Q  397 aactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||| |||||||||| |||||| |||||| ||||    
T  26070495 aactcctctaaatgacctcttatttgccttaaaat 26070461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 196 - 409
Target Start/End: Complemental strand, 20694862 - 20694649
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||| || ||    || |||||  |||||| ||||||| | |||||||||||||||| |     
T  20694862 tattgtcttcaaataccttctaagaaccatttatcttcaatcttaatgtccgttatccttcatatgatgtcttgttttgccgatttacatgatttcttac 20694763  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |       |||||||||||||||   ||  || |||| |||||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  20694762 taaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattga 20694663  T
Q  396 caactcttctaaat 409  Q
    ||| || |||||||    
T  20694662 caaatcctctaaat 20694649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 407
Target Start/End: Complemental strand, 24517595 - 24517365
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| |||| |||| |||| |||| ||| ||||| | | |||||||| ||| || ||||  |||| | ||| ||||||||||||| ||    
T  24517595 aacttgaaatgaattttcttcgctttctattatcttaaaaaaccttatgataaccattggtctgcaatctttgtatccttgatccttcacgtgatgtatt 24517496  T
Q  269 gttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaac 368  Q
    | ||||| |||||||||||||||| |||         |||||||| ||||   |||||||||| |||||||| ||||||||||| ||||||  |||||||    
T  24517495 gatttaccgatttacatgatttcttatta--------caaaacacctatggagttacatgattaaggataaatgtgaattacaacgactcgggtgaaaac 24517404  T
Q  369 aatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    ||||||| |||||| |||||||||||||||||| |||||    
T  24517403 aatacaatatgttcctcaaaccattgacaactcctctaa 24517365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 307 - 431
Target Start/End: Original strand, 23157792 - 23157916
Alignment:
Q  307 aaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    ||||||| ||||  ||| ||||||||| |||||||||||||||||| ||||| |||||||||||||| ||| |||| |||||||||||||||||| ||||    
T  23157792 aaaacacctatgcatttgcatgatttatgataaaagtgaattacaacgactcaaatgaaaacaataccaaaagttcctcaaaccattgacaactcctcta 23157891  T
Q  407 aatgacttcttatctgccttcaaat 431  Q
    | |||||||| || | |||||||||    
T  23157892 attgacttctaattttccttcaaat 23157916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 401
Target Start/End: Original strand, 24410830 - 24411027
Alignment:
Q  204 tcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnn 303  Q
    ||||| ||||| ||||||||||||||||| | |||||| ||| ||||| ||||| ||||||| || |||| |  ||| ||||||||||||| |           
T  24410830 tcaaataccttataagaaccattgatcttgaatcttcagatcctcgatccttcatgtgatgtcttattttgccaattgacatgatttctcactaaaaata 24410929  T
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    |||||||||| |   |  || || |||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  24410930 ctcaaaacacctcgcaagttgcacgatttaggataaaactgaattacaacgactcaaatgaaaacaatacaaaattttcctcaaaccattgacaactc 24411027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 186 - 431
Target Start/End: Complemental strand, 19331742 - 19331498
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgtttt-actgatttaca 284  Q
    |||||| || |||||||||||||   ||||||| || ||||||  |||| |||||||||| ||||| |||||| ||||| |||||||| |  ||||||||    
T  19331742 cttcacattgtattgtcttcaaatgtcttctaaaaatcattgaatttcaatcttcatatcctcgatccttcacttgatgctttgtttttaacgatttaca 19331643  T
Q  285 tgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttctt 384  Q
    ||||||||||         ||||||||||||   |||   ||||||||||||||||| | |||||||| |||||||||||| ||||||||||| |||  |    
T  19331642 tgatttctcacaaaaaagactcaaaacacatggaattg--catgatttaggataaaactaaattacaacgactcgaatgaacacaatacaaaaagtttct 19331545  T
Q  385 caaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||| ||||||||||| ||||| ||| |||| || | |||||||||    
T  19331544 caaacaattgacaactcctctaattgaattctaattttccttcaaat 19331498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 432
Target Start/End: Complemental strand, 18222607 - 18222479
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactctt 403  Q
    |||||||||| ||||  ||| |||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||  |||||||||||||||||| |    
T  18222607 ctcaaaacacctatggatttgcatgatttaggataaaagtgaattacaatgactcgagttaaaacaatacaatatgtttctcaaaccattgacaactcat 18222508  T
Q  404 ctaaatgacttcttatctgccttcaaata 432  Q
    |||| |  | |||||| || |||||||||    
T  18222507 ctaactctcatcttatttgtcttcaaata 18222479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 169 - 406
Target Start/End: Original strand, 19763751 - 19763993
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttc--------gattcttcacgt 260  Q
    ||||||||| || ||| ||||||||| |||| |||||||| |||||||||||||| |||||||||| |||||| ||||||        |||||||||| |    
T  19763751 aacttgaaatgaattttcttcactttgtattatcttcaaaaaccttctaagaacccttgatcttcaatcttca-atcttcatttccttgattcttcactt 19763849  T
Q  261 gatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcga 360  Q
    ||||| | ||||| | |||||||||||||||||| |       ||||||||||  ||||  || ||||||||||||||||| |||| ||||  | ||| |    
T  19763850 gatgtctcgttttgccgatttacatgatttctcactaaaaagactcaaaacac--atgaagttgcatgatttaggataaaactgaactacattgcctcaa 19763947  T
Q  361 atgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    ||||||||||||||||| ||||  |||||| |||| ||||| ||||    
T  19763948 atgaaaacaatacaaaaagttccacaaacccttgagaactcatcta 19763993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 167 - 401
Target Start/End: Complemental strand, 16634298 - 16634063
Alignment:
Q  167 gaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtt 266  Q
    ||||||||||| || |||  ||||  || |||| |||||||| |||||||||||||||||| ||||||  ||||||||  | | | |||||||||||||     
T  16634298 gaaacttgaaatgaatttttttcatcttgtattttcttcaaaaaccttctaagaaccattggtcttcaaacttcatattattgttccttcacgtgatgtc 16634199  T
Q  267 ttgttttactgatttacatgatttctcattnnnnnnnct-caaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaa 365  Q
    ||| |||   |||||| ||||||||||| |        | |||||||| |||    || |||||||||| ||||||||||||||||| ||||||| ||||    
T  16634198 ttgatttgtcgatttatatgatttctcactgcaaaacattcaaaacacctatagagttgcatgatttagaataaaagtgaattacaacgactcgagtgaa 16634099  T
Q  366 aacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    |||||||||| |||||  ||||||||||||||||||    
T  16634098 aacaatacaatatgtttctcaaaccattgacaactc 16634063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 407
Target Start/End: Complemental strand, 20083689 - 20083476
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    |||||| |||||| || || ||| ||||||||| ||||| | |||||||| |  ||  |||||||||||||||||||| | ||||||||| |||| |||     
T  20083689 tattgttttcaaatactttataaaaaccattgaacttcatttttcatatccttaatctttcacgtgatgttttgttttgccgatttacataatttttcac 20083590  T
Q  296 tnnnnnnn--ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccatt 393  Q
    |         |||||||||| ||||   || |||||||||||||| || ||||||||||| |||||||| ||||||||| ||||||||| |||||| |||    
T  20083589 taaaaaaagactcaaaacacctatggaattgcatgatttaggatagaactgaattacaaatactcgaataaaaacaataaaaaatgttcctcaaactatt 20083490  T
Q  394 gacaactcttctaa 407  Q
    |||||||| |||||    
T  20083489 gacaactcctctaa 20083476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 401
Target Start/End: Original strand, 16622542 - 16622765
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| ||||| ||| ||||||||||||| ||||||||||||||| || |||||| |||||||||| |  || ||||| ||||||| ||    
T  16622542 aacttgaaatgaattttcttcaatttgtattgtcttcaaa-accttctaagaaccactggtcttcaatcttcatatccttaatccttcatgtgatgtctt 16622640  T
Q  269 gttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaac 368  Q
    | |||    ||||||||||||||||| |         |||||||| |||||  || |||||| ||||||||||||| |||||||  | | || |||| ||    
T  16622641 gatttgtcaatttacatgatttctcactg--------caaaacacctatgaagttgcatgatctaggataaaagtgtattacaacaaatagagtgaatac 16622732  T
Q  369 aatacaaaatgttcttcaaaccattgacaactc 401  Q
    ||||||| |||||| ||||||||||||||||||    
T  16622733 aatacaacatgttcctcaaaccattgacaactc 16622765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 396
Target Start/End: Complemental strand, 17027759 - 17027549
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    ||||||||| ||||||||||||  |||||||||||| |||| | ||||| |||||||||||| |||  | |||||||||| ||| |||   |||||||||    
T  17027759 cttcactttgtattgtcttcaagaaccttctaagaagcattaa-cttcaatcttcatatctttgatcttgcacgtgatgtcttgatttttcgatttacat 17027661  T
Q  286 gatttctcattnnnnnnnc-tcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttctt 384  Q
    ||||||||||          ||||||||| ||||   || | |||||||||||||||||||||||||| ||||| | |||||||||| ||| |||||| |    
T  17027660 gatttctcatggcaaaacagtcaaaacacctatggagttgcgtgatttaggataaaagtgaattacaacgactcaagtgaaaacaattcaatatgttcct 17027561  T
Q  385 caaaccattgac 396  Q
    |||||| |||||    
T  17027560 caaacccttgac 17027549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 196 - 400
Target Start/End: Original strand, 11274222 - 11274428
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctca- 294  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||| | ||| ||||| ||||||| ||| |||   ||| |||||||||||| |     
T  11274222 tattgtcttcaaagaccttctaagaaccattggtcttcaatcttcatatccttgatccttcatgtgatgtcttgatttgtcgatatacatgatttcttac 11274321  T
Q  295 ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttct-tcaaaccatt 393  Q
    |        |||||||||| ||||   || ||||||||||||||||||  | || ||| | ||| | |||||||||||||| ||||| | ||||||||||    
T  11274322 tacaaaacactcaaaacacctatggagttgcatgatttaggataaaagcaagttgcaacggctcaagtgaaaacaatacaatatgttttctcaaaccatt 11274421  T
Q  394 gacaact 400  Q
    |||||||    
T  11274422 gacaact 11274428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 173 - 406
Target Start/End: Complemental strand, 24841998 - 24841765
Alignment:
Q  173 tgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttt 272  Q
    ||||| || ||| ||||| ||| | |||||||||||  |||||||||||||||||| ||||| ||  |||||| | ||| ||||||||| ||| ||| ||    
T  24841998 tgaaatgaattttcttcattttgtgttgtcttcaaaatccttctaagaaccattga-cttcaatccacatatccttgatccttcacgtgttgtcttgatt 24841900  T
Q  273 tactgatttacatgatttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaat 371  Q
    |    ||||||||||||||||| |        || ||||||| ||||   || |||||| |||||||||||||| |||||| ||||||| ||||||||||    
T  24841899 tttcaatttacatgatttctcactacaaaacactaaaaacacctatggagttccatgatctaggataaaagtgacttacaacgactcgagtgaaaacaat 24841800  T
Q  372 acaaaatgttcttcaaaccattgacaactcttcta 406  Q
    |||| |||||| |||||||||||| ||||| ||||    
T  24841799 acaatatgttcctcaaaccattgaaaactcctcta 24841765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 17382057 - 17382139
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||||||||||||||||| ||||| || | || |||||||||||||| |||||| |||||||||||||||||| |||||    
T  17382057 catgatttaggataaaagtgaaatacaacgatttgagtgaaaacaatacaatatgttcctcaaaccattgacaactcctctaa 17382139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 395
Target Start/End: Original strand, 25594574 - 25594784
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    |||||||||  ||| ||| |||| ||||||||| | |||||||| |||| |||||||||| | |||  |||| ||||||| ||  |||   |||||||||    
T  25594574 cttcactttgcattatctacaaaaaccttctaatatccattgatattcaatcttcatatccttgatcgttcatgtgatgtcttaatttttcgatttacat 25594673  T
Q  286 gatttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttctt 384  Q
    ||||||||| |        ||||||||||||||||  || ||| ||||||||||||| |||| |||||  |||| | |||||||||||||| |||||| |    
T  25594674 gatttctcactataaaacactcaaaacacatatgaagttgcatcatttaggataaaaatgaaatacaacaactccagtgaaaacaatacaatatgttcct 25594773  T
Q  385 caaaccattga 395  Q
    |||||||||||    
T  25594774 caaaccattga 25594784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 306 - 395
Target Start/End: Complemental strand, 25680708 - 25680619
Alignment:
Q  306 caaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |||||||| |||||  || |||||||||| |||||| |||||||||| ||||||| |||||||||||||| |||||| ||||||||||||    
T  25680708 caaaacacctatgaagttgcatgatttagaataaaattgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattga 25680619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 400
Target Start/End: Complemental strand, 18178333 - 18178120
Alignment:
Q  187 ttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttg-ttttactgatttacat 285  Q
    |||| ||| |||| ||||||||||||||| |||||| |||| |||||| |||||||||| ||||| ||||| | | ||| ||| |||| |  ||||||||    
T  18178333 ttcaatttgtattatcttcaaagaccttccaagaacaattggtcttcaatcttcatatcctcgatccttcatgcggtgtcttgttttttccaatttacat 18178234  T
Q  286 gatttctcattnnnnnnnctcaaaacacatatgattttac-atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttctt 384  Q
    ||||||||| |       || |||| || |||||  || | |||||||||||||||| |||||||||| |||  ||||||||||  |||||||||||| |    
T  18178233 gatttctcactaaaaagactaaaaatacctatgaagttgcaatgatttaggataaaactgaattacaacgacctgaatgaaaac--tacaaaatgttcat 18178136  T
Q  385 caaaccattgacaact 400  Q
    ||||| |||| |||||    
T  18178135 caaactattgtcaact 18178120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 400
Target Start/End: Original strand, 26329935 - 26330165
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| ||||||||| ||||||||| ||| |||||||||| |||||||| ||||| |||||||||| | ||| ||||| ||||||| ||    
T  26329935 aacttgaaatgaattttcttcactttgtattgtcttaaaaaaccttctaaggaccattga-cttcaatcttcatatccttgatccttcatgtgatgtctt 26330033  T
Q  269 gttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaa-agactcgaatgaaaa 367  Q
    | |||    |||||||||||||| | |        |||||||||| |||||  || |||||| ||||||||||| |||||||||  | ||| | ||||||    
T  26330034 gatttttcaatttacatgatttcac-tacaaaacactcaaaacacctatgaagttgcatgatctaggataaaagggaattacaactggctcaagtgaaaa 26330132  T
Q  368 caatacaaaatgttcttcaaaccattgacaact 400  Q
    |||||||| || ||| | | |||||||||||||    
T  26330133 caatacaatatattccttagaccattgacaact 26330165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 24268648 - 24268574
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaac 399  Q
    |||||| |||||||||||||||||| || ||||||| |||||||||||||| |||||| ||||||||| ||||||    
T  24268648 catgatctaggataaaagtgaattataatgactcgagtgaaaacaatacaagatgttcctcaaaccatcgacaac 24268574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 24345277 - 24345203
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaac 399  Q
    |||||| |||||||||||||||||| || ||||||| |||||||||||||| |||||| ||||||||| ||||||    
T  24345277 catgatctaggataaaagtgaattataatgactcgagtgaaaacaatacaagatgttcctcaaaccatcgacaac 24345203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 15205757 - 15205660
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    |||||||||| ||||   || |||||| ||||| |||| |||||||||| ||||||| |||||||||||||| |||||| |||||||| |||||||||    
T  15205757 ctcaaaacacctatggaattgcatgatctaggagaaaactgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccactgacaactc 15205660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 30072365 - 30072269
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgt 265  Q
    ||||||||| ||  || ||||||||| ||||||||| ||| ||||| ||||||||||| ||||||| |||||||||||| ||| ||||| |||||||    
T  30072365 aacttgaaatgaaatttcttcactttgtattgtctttaaaaaccttttaagaaccattaatcttcaatcttcatatctttgatccttcatgtgatgt 30072269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 432
Target Start/End: Original strand, 15697358 - 15697465
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    |||||||| |||||||| |||||| ||| | ||| |||||||||||||||||| |||| || |||||| ||||||||| ||  ||||||||| || ||||    
T  15697358 catgatttcggataaaactgaattgcaacgtctcaaatgaaaacaatacaaaaagttcctctaaccatcgacaactctactgtatgacttctaatttgcc 15697457  T
Q  425 ttcaaata 432  Q
    || |||||    
T  15697458 ttgaaata 15697465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 265
Target Start/End: Original strand, 18452675 - 18452773
Alignment:
Q  167 gaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgt 265  Q
    ||||||||||| || ||| ||||||||| |||||| || ||| ||||| ||||||||||||||||||| | |||||||||| ||| | ||| |||||||    
T  18452675 gaaacttgaaatgaattttcttcactttgtattgttttaaaaaaccttataagaaccattgatcttcaattttcatatctttgatccctcatgtgatgt 18452773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 408
Target Start/End: Original strand, 22967845 - 22967947
Alignment:
Q  306 caaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttct 405  Q
    |||||||| |||||  || ||| ||||| |||| ||||||||||||  |||| ||||||||||| ||||| |||||| |||||||||| ||||||| |||    
T  22967845 caaaacacctatgaagtttcattatttatgatacaagtgaattacattgacttgaatgaaaacagtacaatatgttcctcaaaccattcacaactcctct 22967944  T
Q  406 aaa 408  Q
    |||    
T  22967945 aaa 22967947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 407
Target Start/End: Original strand, 12339899 - 12340118
Alignment:
Q  188 tcactttatattgtcttcaaagaccttctaagaaccattgatcttcagt-cttcatatcttcgattcttcacgtgatgttttgttttactgatttacatg 286  Q
    ||||||| |||||||||||| ||||||||||||||| ||||| |||| | ||||||  | | ||| ||||||||||||| ||| |||  ||||||| |||    
T  12339899 tcactttgtattgtcttcaacgaccttctaagaacccttgattttcaattcttcat--ccttgatccttcacgtgatgtcttgatttgttgatttatatg 12339996  T
Q  287 atttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttc 385  Q
    ||| || | |        | ||||| ||||||||  || |||||| ||| |||||| |||||||||| ||| | | |||||| |||| || |||||| ||    
T  12339997 attccttactacaaaacacgcaaaatacatatgaagttgcatgatctagtataaaactgaattacaatgacacaagtgaaaataatataatatgttcctc 12340096  T
Q  386 aaaccattgacaactcttctaa 407  Q
    |||||||||||||||| |||||    
T  12340097 aaaccattgacaactcctctaa 12340118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 22230036 - 22229929
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    ||||||||  |||| |||||||  |||||||||||||| |||||||||| | | |||||||| ||| ||||||||||||| ||| |||  ||||||||||    
T  22230036 cttcacttggtattatcttcaacaaccttctaagaacccttgatcttcaat-tccatatctttgatccttcacgtgatgtcttgatttgttgatttacat 22229938  T
Q  286 gatttctca 294  Q
    |||| ||||    
T  22229937 gattcctca 22229929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 25942214 - 25942150
Alignment:
Q  345 aattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaat 409  Q
    |||||||| ||||||| |||||| |||| |||||| || ||||||||||||||||||||||||||    
T  25942214 aattacaacgactcgattgaaaataatataaaatgctcctcaaaccattgacaactcttctaaat 25942150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 407
Target Start/End: Original strand, 23137471 - 23137534
Alignment:
Q  344 gaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||| || |||||  ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  23137471 gaattagaacgactcatatgaaaacaatacaaaatgttctccaaatcattgacaactcttctaa 23137534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 431
Target Start/End: Complemental strand, 24130751 - 24130642
Alignment:
Q  322 ttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatct 421  Q
    |||||||||||  ||||||||||||| | ||  ||||||| || | | ||||||||||||| ||||||||||||||| |  ||||| |||| |||||| |    
T  24130751 ttacatgatttgtgataaaagtgaatcataactactcgaacgacagccatacaaaatgttcctcaaaccattgacaaatgctctaattgacctcttattt 24130652  T
Q  422 gccttcaaat 431  Q
    ||||| ||||    
T  24130651 gccttaaaat 24130642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 16603614 - 16603713
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaa-tgttcttcaaaccattgacaactct 402  Q
    |||||||||| |||||  || ||||||||||| ||||| | |||||||| ||||||||| ||||||||| ||||  |||| ||||| ||| |||||||||    
T  16603614 ctcaaaacacctatgaaattgcatgatttaggctaaaatttaattacaacgactcgaatcaaaacaataaaaaagagttcctcaaatcatcgacaactct 16603713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 23157686 - 23157785
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    ||||||||| | ||||||| ||| ||||| ||||||||||||| ||||| |||| ||||| |  || |||||| || ||||||||||| | |||||||||    
T  23157686 cttcactttctgttgtctttaaataccttataagaaccattgaacttcaatcttaatatcctttatccttcacttggtgttttgttttgccgatttacat 23157785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 358
Target Start/End: Complemental strand, 25367825 - 25367654
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    ||||||||| |||| ||||||||   ||||||||||||||||| ||| | ||||| |||| |||||  |||| ||||||  ||  ||| | |||||||||    
T  25367825 cttcactttctatt-tcttcaaatgtcttctaagaaccattgaactttaatcttcgtatcatcgatatttcatgtgatgcctttcttttccgatttacat 25367727  T
Q  286 gatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactc 358  Q
    ||||||||| |       |||||||||| |||||  || ||||||||| ||||||| |||||| ||| |||||    
T  25367726 gatttctcactaaaaagactcaaaacacctatgaagttgcatgatttatgataaaactgaatttcaacgactc 25367654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 432
Target Start/End: Original strand, 22643945 - 22643993
Alignment:
Q  384 tcaaaccattgacaactcttctaaatgacttcttatctgccttcaaata 432  Q
    |||||||||||||||||| |||||||||||||| || | ||||||||||    
T  22643945 tcaaaccattgacaactcctctaaatgacttctaattttccttcaaata 22643993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 24846324 - 24846248
Alignment:
Q  355 actcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||||||||||| |||| ||||| ||| ||||||||| || || || |||||||||| |||||| || ||||||||    
T  24846324 actcgaatgaaaaaaatataaaatattcctcaaaccatggaaaaatcctctaaatgacctcttatttgtcttcaaat 24846248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 17695355 - 17695402
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcata 243  Q
    ||||||||||||| ||||||||| ||||||||||||||| | ||||||    
T  17695355 tattgtcttcaaaaaccttctaataaccattgatcttcattattcata 17695402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 431
Target Start/End: Complemental strand, 30790865 - 30790768
Alignment:
Q  329 atttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttca 428  Q
    ||||||||||||| ||||||| || ||||| ||| |||||||     ||||||  | |||||||||||| ||| ||||| ||||||||||| ||| ||||    
T  30790865 atttaggataaaactgaattataacgactcaaataaaaacaa-----aatgttactaaaaccattgacatctcctctaattgacttcttatttgctttca 30790771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 17381954 - 17382034
Alignment:
Q  214 tctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctca 294  Q
    |||||||||||||| ||||||  ||||||||| | ||| |||||| | |||| ||| |||   ||||||||||||||||||    
T  17381954 tctaagaaccattggtcttcaaacttcatatccttgatccttcacattatgtcttgatttgacgatttacatgatttctca 17382034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 18178557 - 18178458
Alignment:
Q  4 aaaaacaagcaaacaacaaatttctgcctgcaagctatgtgcagggcacatgggtactcatgtaggggtgcatgaggtagtagccaaggctgcctcatgc 103  Q
    |||||||||||||||||| |||| || | |||| | |||||  |||| ||||||||| ||   |||| ||||||||| |||||||||||| | |||||||    
T  18178557 aaaaacaagcaaacaacacattt-tgtccgcaaaccatgtgtggggcgcatgggtacacacagagggatgcatgaggaagtagccaaggccgtctcatgc 18178459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 5e-51; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 152 - 431
Target Start/End: Original strand, 21828981 - 21829260
Alignment:
Q  152 gtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgat 251  Q
    ||||||||||| |||| ||||| ||| || | | ||| |  ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | |||    
T  21828981 gtcttgaaatgccttggaacttaaaatgaatattctttaacttatattgtcttcaaagaccttcgatgaaccattgatcttcaatcttcatatccttgat 21829080  T
Q  252 tcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattaca 351  Q
     ||||| ||||||| ||||||    |||||||| ||||||||| |       | |||||| |||||||  ||  |||||||||||||||| |||||||||    
T  21829081 acttcatgtgatgtcttgtttcgacgatttacaagatttctcactaacaagacccaaaactcatatgaagttgtatgatttaggataaaactgaattaca 21829180  T
Q  352 aagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    | ||||| |||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||||| | |||||||||    
T  21829181 acgactcaaatgaaaataatacaaaatgttcctcaaaccattgacaactcctctaaatgacctcttattttccttcaaat 21829260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 187 - 396
Target Start/End: Complemental strand, 11475078 - 11474868
Alignment:
Q  187 ttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatg 286  Q
    |||||||| ||||||||||||| | ||||||||||||||| ||||| | || ||||||||||||| ||||| ||||||| ||||||| | ||||||||||    
T  11475078 ttcactttgtattgtcttcaaatatcttctaagaaccatttatcttgaatcctcatatcttcgatccttcatgtgatgtcttgttttgccgatttacatg 11474979  T
Q  287 atttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttc 385  Q
    |||||||| |        ||||||||||||||||  || ||||||||||||||||| |||||||||| || ||||||||||| ||||||||| |||| ||    
T  11474978 atttctcactaaaaaagactcaaaacacatatgaagttgcatgatttaggataaaattgaattacaacgagtcgaatgaaaataatacaaaaagttcctc 11474879  T
Q  386 aaaccattgac 396  Q
    |||||||||||    
T  11474878 aaaccattgac 11474868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 153 - 431
Target Start/End: Original strand, 8402400 - 8402678
Alignment:
Q  153 tcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagacctt-ctaagaaccattgatcttcagtcttcatatcttcgat 251  Q
    ||||| |||||| || ||||||||| || | | |||||||||||||| |||||||| ||||| | ||||||||| | |||||| |||||||||| |||||    
T  8402400 tcttgcaatgtcatggaacttgaaatgaatgttcttcactttatattttcttcaaatacctttcgaagaaccatagttcttcaatcttcatatcctcgat 8402499  T
Q  252 tcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattaca 351  Q
     |||||| |||||| ||| | ||  |||||||| |||| |||  |       |||||||||| ||||   || ||||||||| ||||||| |||||||||    
T  8402500 ccttcacttgatgtcttgatctatcgatttacacgattcctcgctaaaaga-ctcaaaacacctatggagttgcatgatttaagataaaaatgaattaca 8402598  T
Q  352 aagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    | ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| || |||||| |||||||||||    
T  8402599 acgactcgaatgaaaacaatacaaattgttcctcaaaccattgacaactcctctaaattacatcttatttgccttcaaat 8402678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 151 - 430
Target Start/End: Complemental strand, 18474437 - 18474159
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| ||||  ||| ||||||||| || ||| ||||||||| ||||||||||||| |||||||||| ||||||||  |||| |||| | ||||||||    
T  18474437 cgtcttgcaatgcattggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagtaccattgaaattcaatctttacatcttcga 18474338  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    | ||||| || |||| |||| || | |||||||||||||||||| |       |||||||||| ||||   || ||||||||||||||| ||||||||||    
T  18474337 tccttcatgtaatgtcttgtgttcccgatttacatgatttctcactgaaaagactcaaaacacctatggagttgcatgatttaggataacagtgaattac 18474238  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaa 430  Q
    || || ||||||| |||||||||||   |||| |||||| ||||| || || ||||| |||||||| || || |||||||    
T  18474237 aatgaatcgaatg-aaacaatacaatcagttcctcaaacgattgataaatcctctaattgacttctaatttgtcttcaaa 18474159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 161 - 401
Target Start/End: Original strand, 19219068 - 19219309
Alignment:
Q  161 tgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgt 260  Q
    ||||||| || |||||| || |||  |||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||| ||||| ||    
T  19219068 tgtcttggaatttgaaatgaattttattcactttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttgatccttcatgt 19219167  T
Q  261 gatgttttgttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcg 359  Q
    ||||| ||| |||   ||||||||||||| |||| |        |||||||||  |||| | || |||||||| ||||||||||||||||||| |||||     
T  19219168 gatgtcttggtttgaagatttacatgattcctcactacaaaacactcaaaacatttatggtgttgcatgattttggataaaagtgaattacaacgactct 19219267  T
Q  360 aatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    | |||||  |||| || ||| || ||||||||||||||||||    
T  19219268 agtgaaagtaataaaatatgctcctcaaaccattgacaactc 19219309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 416
Target Start/End: Complemental strand, 26297934 - 26297751
Alignment:
Q  231 ttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgat 330  Q
    |||| |||||||||| ||||| |||||| |||||| ||||||| | |||||||||||||| ||| |       |||||  |||||||||  || ||||||    
T  26297934 ttcaatcttcatatcctcgatccttcacttgatgtcttgttttgccgatttacatgatttatcactaaatagactcaa--cacatatgaagttgcatgat 26297837  T
Q  331 ttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttct 416  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||| |||  |||||||||| ||||||| ||||| ||||||||    
T  26297836 ttaggataaaattgaattacaacgactcgaatgaaaacaatataaaaagtttctcaaaccattaacaactcctctaactgacttct 26297751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 217 - 431
Target Start/End: Original strand, 26387758 - 26387972
Alignment:
Q  217 aagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacata 316  Q
    |||||||||| ||||||| | |||||||||| ||| |||||| |||||| ||||||  ||||||||||||||||||||||       |||||||||  ||    
T  26387758 aagaaccattaatcttcaatattcatatctttgatccttcacttgatgtcttgtttagctgatttacatgatttctcattaaaaagactcaaaacatcta 26387857  T
Q  317 tgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttct 416  Q
    ||   || ||||||||||||||||| | |||||| | ||| | |||||||| ||||||||| |||  |||||||||||||||||  ||||| | ||||||    
T  26387858 tggagttgcatgatttaggataaaacttaattactacgacacaaatgaaaagaatacaaaacgtttctcaaaccattgacaactactctaatttacttct 26387957  T
Q  417 tatctgccttcaaat 431  Q
     || |||||||||||    
T  26387958 aatttgccttcaaat 26387972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 307 - 406
Target Start/End: Complemental strand, 13911376 - 13911277
Alignment:
Q  307 aaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    |||||||||||||  || |||||| ||||||||||||||||||||| || || | |||||||||||| | |||||| |||||||||||||||||||||||    
T  13911376 aaaacacatatgaagttgcatgatctaggataaaagtgaattacaatgattcaagtgaaaacaataccatatgttcctcaaaccattgacaactcttcta 13911277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 196 - 400
Target Start/End: Original strand, 23908163 - 23908367
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    ||||||||||||| || |||||| ||||||||||||| | |||||||||  | ||| ||||| | ||||| ||| ||| | | |||||||||||||||      
T  23908163 tattgtcttcaaaaactttctaaaaaccattgatcttaaatcttcatattcttgatccttcatgagatgtcttgctttgccgctttacatgatttctccc 23908262  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |       |||||| ||| |||||  || ||| |||| ||||||||| ||||||||| || |||||||||||||||||||||||||| |||| |||  ||    
T  23908263 tagaaagactcaaagcacctatgaaattgcattattttggataaaagggaattacaacgaatcgaatgaaaacaatacaaaatgttcctcaacccaggga 23908362  T
Q  396 caact 400  Q
    |||||    
T  23908363 caact 23908367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 186 - 377
Target Start/End: Original strand, 30493147 - 30493338
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    ||||||||||||| |||||||||   |||||||||||| || ||||| | |||||||||||||||| |||||| |  ||| | ||||| || ||||||||    
T  30493147 cttcactttatatcgtcttcaaatgtcttctaagaaccgttaatctttaatcttcatatcttcgatccttcactttgtgtct-gttttgcttatttacat 30493245  T
Q  286 gattt-ctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaa 377  Q
    ||||| |||| |       ||||||||||  |||  ||| ||||||||||||||||| | || ||||| ||||||||||||||||||||||||    
T  30493246 gattttctcactaaaaagactcaaaacacccatggatttgcatgatttaggataaaactaaactacaacgactcgaatgaaaacaatacaaaa 30493338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 431
Target Start/End: Complemental strand, 28422684 - 28422440
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    ||||||||| ||||||||||||| ||||||||| | | ||||| ||||| |||||||||| || || ||||||||||||| ||| |||   ||| |||||    
T  28422684 cttcactttgtattgtcttcaaataccttctaacatc-attgaacttcaatcttcatatcctcaatccttcacgtgatgtattgatttgtcgatctacat 28422586  T
Q  286 gatttctcattnnnnnnnct-caaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttctt 384  Q
    ||||||||| |        | ||||||||  ||    || |||||||||| ||||||||||||||||| || |||||||||||||||||||||  ||| |    
T  28422585 gatttctcactacaaaacattcaaaacaccaattgagttgcatgatttag-ataaaagtgaattacaatgattcgaatgaaaacaatacaaaaaattcct 28422487  T
Q  385 caaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||| |  |||||||| ||||| |||||||| || | |||||||||    
T  28422486 caaacaaacgacaactcctctaattgacttctaattttccttcaaat 28422440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 407
Target Start/End: Complemental strand, 10342017 - 10341807
Alignment:
Q  188 tcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatga 287  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||| ||||  |||| |  || |||||| |||||||| | |||  ||||||||||||    
T  10342017 tcactttgtattgtcttcaaaaaccttctaagaaccactgatcttcaatctttctatccttaatccttcacttgatgtttggatttgttgatttacatga 10341918  T
Q  288 tttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaa 387  Q
    |||||||           |||||||| ||||   || |||||||| | ||||||||||||||||| ||||  | ||||||||||||||  ||||| || |    
T  10341917 tttctca--------caacaaaacacctatggagttgcatgattttgaataaaagtgaattacaacgactttagtgaaaacaatacaatttgttcctc-a 10341827  T
Q  388 accattgacaactcttctaa 407  Q
    |||||||||||||| |||||    
T  10341826 accattgacaactcctctaa 10341807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 2729619 - 2729716
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    ||||||||||||||||  || |||| |||||||||||| |||||||||| ||||||| ||||||||||| || |||||| |  |||||||||||||||    
T  2729619 ctcaaaacacatatgaagttgcatggtttaggataaaaatgaattacaaggactcgagtgaaaacaatataatatgttccttgaaccattgacaactc 2729716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 292
Target Start/End: Original strand, 19542971 - 19543112
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| |||| |||| ||||||||| || ||| ||||||||| ||||||||||||| ||||||||||||| |||||  |||| |||| | ||  ||||    
T  19542971 cgtcttgcaatgccttggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagaactattgaaattcaatctttacattctcga 19543070  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttct 292  Q
    | ||||| ||||||| |||| || | |||| |||||||||||    
T  19543071 tccttcatgtgatgtcttgtgttcccgattaacatgatttct 19543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 328 - 416
Target Start/End: Complemental strand, 19285189 - 19285102
Alignment:
Q  328 gatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttct 416  Q
    ||||||||| |||| |||||||||| |||||||||||||| |||||||||| ||| ||| || ||||||||||| ||||||||||||||    
T  19285189 gatttaggacaaaattgaattacaacgactcgaatgaaaataatacaaaattttc-tcatactattgacaactcctctaaatgacttct 19285102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 18065905 - 18065833
Alignment:
Q  326 atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    |||||||||||||||||||||||||   ||||||| |||||||||||||| |||||  ||||||||||||||||||    
T  18065905 atgatttaggataaaagtgaattac---gactcgagtgaaaacaatacaatatgtttctcaaaccattgacaactc 18065833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 398
Target Start/End: Complemental strand, 33577827 - 33577754
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaa 398  Q
    |||||||||||||| || |||||||||| || || ||| |||||||||||||| ||||||||||||||||||||    
T  33577827 catgatttaggatataaatgaattacaatgaatcaaataaaaacaatacaaaacgttcttcaaaccattgacaa 33577754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 12409541 - 12409473
Alignment:
Q  335 gataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactctt 403  Q
    ||||||| |||||||||| ||||| | |||||| ||||||| |||||||||||||||||||||||||||    
T  12409541 gataaaaatgaattacaacgactcaagtgaaaataatacaatatgttcttcaaaccattgacaactctt 12409473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 19263922 - 19264002
Alignment:
Q  327 tgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||||||||||||||||||||| ||||| | ||| ||||||| || ||| || |||||||||||||||||| |||||    
T  19263922 tgatttaggataaaagtgaattacaacgactctagtgacaacaatataatatgatcctcaaaccattgacaactcctctaa 19264002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 405
Target Start/End: Complemental strand, 25883352 - 25883116
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagt-cttcatatcttcgattcttcacgtgatgttt 267  Q
    ||||||||| || ||| ||||||||| ||||||||||||  |||||||||||||| |||||||||| | ||||||  | | ||| ||| ||  ||||| |    
T  25883352 aacttgaaatgaattttcttcactttgtattgtcttcaacaaccttctaagaacccttgatcttcaattcttcat--ccttgatccttaacaagatgtct 25883255  T
Q  268 tgttttactgatttacatgatttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaa 366  Q
    || |||  |||| ||||||||| |||| |        |||||||||| ||||   || ||| || |||||||||| |||||||||| || |||| |||||    
T  25883254 tgatttgatgatgtacatgattcctcactataaaacactcaaaacacctatgtagttgcataatctaggataaaactgaattacaacgattcgagtgaaa 25883155  T
Q  367 acaatacaaaatgttcttcaaaccattgacaactcttct 405  Q
    |||||| || |||||| |||||  |||||||||||||||    
T  25883154 acaatataatatgttcctcaaaaaattgacaactcttct 25883116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 395
Target Start/End: Original strand, 19546002 - 19546075
Alignment:
Q  322 ttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    ||||||||| |||||||| |||||||||||| ||||| ||| |||||||||||| | |||| ||||||||||||    
T  19546002 ttacatgatataggataatagtgaattacaatgactcaaataaaaacaatacaataagttcctcaaaccattga 19546075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 407
Target Start/End: Original strand, 23007088 - 23007169
Alignment:
Q  326 atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||||||||||||||| ||| || |||||||  ||||||||||||| || ||| ||||| |||||||||||| |||||    
T  23007088 atgatttaggataaaagtgatttataatgactcgagggaaaacaatacaatatattcctcaaatcattgacaactcatctaa 23007169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 398
Target Start/End: Original strand, 27374473 - 27374546
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaa 398  Q
    ||||||||||||||||| || |||| || ||||||||||||||||||||||||  ||| | |||||||||||||    
T  27374473 catgatttaggataaaactggattataatgactcgaatgaaaacaatacaaaaacttccttaaaccattgacaa 27374546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 431
Target Start/End: Complemental strand, 25188980 - 25188745
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcata-tcttcgattcttcacgtgatgttttgttttactgatttacatgatttctca 294  Q
    ||||||||| ||| ||||  |||||||||||||| |||| |||||||| || | ||| ||||  ||||||| ||| ||||||||||| ||||||||  ||    
T  25188980 tattgtcttaaaaaacctcttaagaaccattgatattcattcttcatattccttgatccttcttgtgatgtcttgctttactgattttcatgatttaaca 25188881  T
Q  295 ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattg 394  Q
             ||||||| | |||||   || ||||||||| |||||||||||||||||| || |||||||| || |||  ||||  |||  ||||||||||    
T  25188880 acaaaacggctcaaaatatatatggagttgcatgatttatgataaaagtgaattacaatgattcgaatgagaa-aatttaaaacattccacaaaccattg 25188782  T
Q  395 acaactcttctaaatgacttcttatctgccttcaaat 431  Q
     ||| || |||||||||| |||||| || ||||||||    
T  25188781 tcaattcctctaaatgacctcttatttgtcttcaaat 25188745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 1475302 - 1475384
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||| ||||||| || |||||||||| ||||||| |||||| ||||||| || ||| |||||||||||| ||||| |||||    
T  1475302 catgatctaggatataattgaattacaacgactcgagtgaaaataatacaatatattcctcaaaccattgaaaactcctctaa 1475384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 377
Target Start/End: Original strand, 5632398 - 5632607
Alignment:
Q  159 aatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcac 258  Q
    |||| |||| ||||||||| || ||| ||||| ||| |||| |||||||| ||||| |||||||| ||| |||||| |||| ||||  || ||||| ||     
T  5632398 aatgccttggaacttgaaatgaattttcttcaatttttattatcttcaaataccttataagaaccgttg-tcttcaatctttatattatcaattctccat 5632496  T
Q  259 gtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactc 358  Q
    ||||||| ||| |||   |||||||||||||||||| |         |||||||| ||||   || ||||||| | |||||||||||||||||| || ||    
T  5632497 gtgatgtcttggtttgtcgatttacatgatttctcacta--------caaaacacctatggagttgcatgattcaagataaaagtgaattacaacgaatc 5632588  T
Q  359 gaatgaaaacaatacaaaa 377  Q
     ||||||||||| ||||||    
T  5632589 aaatgaaaacaacacaaaa 5632607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 12573383 - 12573301
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||| |||||||||| |||||||||| | ||||| |||||||||||||||   ||| ||||||||||||||| || |||||    
T  12573383 catgatctaggataaaaatgaattacaacgtctcgagtgaaaacaatacaaagcattcctcaaaccattgacaaatcatctaa 12573301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 13549847 - 13549765
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||| |||||||||| |||||||||| | ||||| |||||||||||||||   ||| ||||||||||||||| || |||||    
T  13549847 catgatctaggataaaaatgaattacaacgtctcgagtgaaaacaatacaaagcattcctcaaaccattgacaaatcatctaa 13549765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 19263767 - 19263867
Alignment:
Q  167 gaaacttgaaacgattttccttcactttatattgtcttcaaaga---ccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgat 263  Q
    ||||||||||| || ||| ||||||||| ||||||||| ||| |   ||||||| |||||||||||||||| |||||||||| | ||| ||||| |||||    
T  19263767 gaaacttgaaatgaattttcttcactttgtattgtcttaaaaaaaaaccttctatgaaccattgatcttcaatcttcatatccttgatccttcatgtgat 19263866  T
Q  264 g 264  Q
    |    
T  19263867 g 19263867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 395
Target Start/End: Complemental strand, 27415282 - 27415194
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |||||||||| |||||  || ||||||||| ||||||||||||||||   ||||||| |||||||||||||| |||||| | ||||| ||||    
T  27415282 ctcaaaacacctatgaagttgcatgatttacgataaaagtgaattac---gactcgagtgaaaacaatacaatatgttccttaaaccgttga 27415194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 401
Target Start/End: Original strand, 33914585 - 33914660
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    |||||||| ||||||  ||||||||||| ||||||| | |||||||||||| |||||| ||||||| ||||||||||    
T  33914585 catgatttgggataac-gtgaattacaacgactcgagtaaaaacaatacaatatgttcctcaaaccgttgacaactc 33914660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 407
Target Start/End: Complemental strand, 21018126 - 21017888
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||||||||| ||| |||| |||||||| |  || ||  |||||||| |||||| | |||||||| | ||| |||||||| |||| ||    
T  21018126 aacttgaaatgaatttccttcattttgtattatcttcaaaaaagttatagaaaccattggtcttcaat-ttcatatcattgatccttcacgtaatgtctt 21018028  T
Q  269 gttttactgatttacatgatttctc-attnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
    | |||  ||| |||||||||||||| ||        |||||||||||| |    || |||||| |||||||||| |||||||||| ||||||  ||||||    
T  21018027 gatttgttgaattacatgatttctcaatacaaaacactcaaaacacatttagagttgcatgatctaggataaaactgaattacaacgactcggttgaaaa 21017928  T
Q  368 caatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
     |||| || |||||| |||||  |||| |||||| |||||    
T  21017927 taatataatatgttcctcaaattattgccaactcctctaa 21017888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 294
Target Start/End: Complemental strand, 26418942 - 26418844
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctca 294  Q
    |||| |||| ||| ||||||||||||||||  ||||| | |||||||||| | ||| ||||| | ||||| || |||| | ||||||||||||||||||    
T  26418942 tattttctttaaaaaccttctaagaaccatcaatctttaatcttcatatccttgatccttcatgcgatgtcttatttttccgatttacatgatttctca 26418844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 16970684 - 16970591
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatt 289  Q
    |||| |||||||| |||||||||||||| ||| ||||||  ||||||||| | ||| |||||| |||||| ||| |||   |||||||||||||    
T  16970684 tattttcttcaaaaaccttctaagaaccgttggtcttcaaacttcatatccttgatccttcacatgatgtcttgatttgtcgatttacatgatt 16970591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 25919484 - 25919568
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaataca--aaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||||||||||||||||||||| | ||||| | | ||||||| |||  | |||||| ||||||||||||||| || |||||    
T  25919484 catgatttaggataaaagtgaattacgatgactcaagtaaaaacaacacaatatatgttcctcaaaccattgacaaatcatctaa 25919568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 294
Target Start/End: Complemental strand, 19285320 - 19285223
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctca 294  Q
    ||||||||||||| |||||| |||||||||||||  ||| |||| ||||| ||||| || ||  |||| | ||||||| |||||||||| ||| |||||    
T  19285320 tattgtcttcaaataccttccaagaaccattgattatcaatcttgatatc-tcgatcctacatttgatatcttgtttttctgatttacacgatatctca 19285223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 7e-47; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 187 - 431
Target Start/End: Complemental strand, 29292001 - 29291758
Alignment:
Q  187 ttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatg 286  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||| | ||||||| | ||||||||||    
T  29292001 ttcactttctgttgtcttcaaagaccttctaagaaccattgatcttcaatattcatatcctcgattcttcacgtgatatcttgttttgccgatttacatg 29291902  T
Q  287 atttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttca 386  Q
    |||||| | |       ||||||| || ||| |  || ||||||||||||||||| || ||||||| ||||| |||||||| |||| ||||  ||| |||    
T  29291901 atttcttactaaaaagactcaaaatacttataaagttgcatgatttaggataaaactgcattacaacgactcaaatgaaaa-aatataaaaaattcctca 29291803  T
Q  387 aaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||||||| ||||| |||| ||||||||| || |||||||||||    
T  29291802 aaccattgataactcctctatatgacttctaatttgccttcaaat 29291758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 170 - 432
Target Start/End: Original strand, 6888059 - 6888318
Alignment:
Q  170 acttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttg 269  Q
    ||||||||||  ||| |||||  || |||||||||||||||| || ||||||||||||||||||| |||||||||| ||||| || ||||||||| ||||    
T  6888059 acttgaaacggattttcttcaacttgtattgtcttcaaagacattttaagaaccattgatcttcaatcttcatatcctcgatactgcacgtgatggtttg 6888158  T
Q  270 ttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaaca 369  Q
    ||||  ||||||||||||||||||| |       ||||||||||   ||   || |||||||||||||| || |||||||||| ||||| |||||||| |    
T  6888159 ttttgttgatttacatgatttctcactaaaatgactcaaaacac--ctggagttgcatgatttaggatagaactgaattacaatgactcaaatgaaaa-a 6888255  T
Q  370 atacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaata 432  Q
    ||||||||||||  || ||||||||||||||| |||||||||| | |||| | ||||||||||    
T  6888256 atacaaaatgtttctctaaccattgacaactcgtctaaatgaccttttatttaccttcaaata 6888318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 151 - 416
Target Start/End: Complemental strand, 5154025 - 5153760
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| ||||||||| ||||||||| || |||  ||||  |||||||||||||||| |||||| || || |||||||||||| |||||||||| ||||    
T  5154025 cgtcttgcaatgtcttggaacttgaaatgaattttattcatgttatattgtcttcaaaaaccttccaataatcattgatcttcaatcttcatatcctcga 5153926  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatat-gattttacatgatttaggataaaagtgaatta 349  Q
    | |||||| | |||| ||||||| |  ||||||||||||||| | |       |||||||||| ||| || || | |||||||| ||||||| |||||||    
T  5153925 tccttcactttatgtcttgttttgcctatttacatgatttcttactaaaaagactcaaaacacctatcgagttga-atgatttaagataaaactgaatta 5153827  T
Q  350 caaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttct 416  Q
    ||| |||||||||||||| |||||||| | ||  | ||| |||||||||||| ||||||| ||||||    
T  5153826 caatgactcgaatgaaaataatacaaattttttctaaaatcattgacaactcctctaaataacttct 5153760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 154 - 407
Target Start/End: Complemental strand, 30544026 - 30543774
Alignment:
Q  154 cttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaa-gaaccattgatcttcagtcttcatatcttcgatt 252  Q
    |||| |||| |||| ||||||||| || ||| ||||||||||||||||||| ||| | ||| ||| |||||||||| ||||| |||||||||| || ||     
T  30544026 cttgcaatgccttggaacttgaaatgaattttcttcactttatattgtctttaaatatcttttaaagaaccattgaacttcaatcttcatatcctcaatc 30543927  T
Q  253 cttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaa 352  Q
    ||||| ||||| | ||||||||| ||||||||||||||||||         |||||||||| |||    || ||||||||||||||||||||||||||||    
T  30543926 cttcatgtgatatcttgttttaccgatttacatgatttctcaccaaaaagactcaaaacacctatataattgcatgatttaggataaaagtgaattacaa 30543827  T
Q  353 agactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
      |||| |||||||||||||||||| |||| ||||| |||||| ||||| |||||    
T  30543826 caactcaaatgaaaacaatacaaaa-gttcatcaaa-cattgagaactcctctaa 30543774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 197 - 431
Target Start/End: Original strand, 14424706 - 14424940
Alignment:
Q  197 attgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcatt 296  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||| |||| |  || |||| | || ||| ||||||| | |||||||||||||||||| |    
T  14424706 attgtgttcaaaaaccttctaagaaccattgatcttcaatcttcttatcatatatccttcccttgttgtcttgttttgccgatttacatgatttctcact 14424805  T
Q  297 nnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgac 396  Q
           |  ||||||| ||||   || ||||||||||||||||| |||||||||| ||||||||||||||| ||| |||| |||| |||||||||||||    
T  14424806 aaaaaaacctaaaacacctatggagttgcatgatttaggataaaactgaattacaacgactcgaatgaaaaccatataaaaagttcctcaaaccattgac 14424905  T
Q  397 aactcttctaaatgacttcttatctgccttcaaat 431  Q
     |||  ||||||| |||||| || | |||||||||    
T  14424906 tacttctctaaattacttctaattttccttcaaat 14424940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 153 - 433
Target Start/End: Original strand, 30850949 - 30851229
Alignment:
Q  153 tcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgatt 252  Q
    ||||| |||| |||| |||||||||  | ||| ||||||||| |||| | ||||||||| ||||||||||| |||||||||| |||||||||| | |||     
T  30850949 tcttgcaatgacttggaacttgaaattaattttcttcactttgtattatattcaaagacattctaagaaccgttgatcttcaatcttcatatccttgatc 30851048  T
Q  253 cttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaa 352  Q
    ||||||  ||||| ||| |||  ||||||||| ||||||||| |         |||||||| |||    || ||||||||||||||||  ||||||||||    
T  30851049 cttcactagatgtcttgctttgatgatttacacgatttctcactagatagatccaaaacacctattgagttgcatgatttaggataaatctgaattacaa 30851148  T
Q  353 agactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaatat 433  Q
     || ||||||||||| |||| ||||  ||| |||||||||  ||||||||| |||||||||||| || | |||||||||||    
T  30851149 cgattcgaatgaaaataatataaaaacttcctcaaaccatcaacaactcttataaatgacttctaattttccttcaaatat 30851229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 151 - 409
Target Start/End: Original strand, 27097649 - 27097907
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| |||| |||| ||||||||  || ||| |||||  || ||||||||||||||||||||||||||| ||| ||  ||| |||||||||  || |    
T  27097649 cgtcttgcaatgccttggaacttgaattgaattttcttcaacttgtattgtcttcaaagaccttctaagaactattcat--tcaatcttcatatgatcaa 27097746  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnn--ctcaaaacacatatgattttacatgatttaggataaaagtgaatt 348  Q
    | | ||||||||||| ||||||| | |||||||||||||||||| |         ||  |||||| |||||  || ||||||||| ||||||| ||||||    
T  27097747 tccatcacgtgatgtcttgttttgccgatttacatgatttctcactaaaaaaagactttaaacacctatgaagttgcatgatttatgataaaactgaatt 27097846  T
Q  349 acaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaat 409  Q
    |||| ||||| |||||||||||| ||| |||||| ||||||||||||||| || |||||||    
T  27097847 acaacgactcaaatgaaaacaatgcaacatgttcctcaaaccattgacaattcctctaaat 27097907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 169 - 407
Target Start/End: Complemental strand, 12956731 - 12956500
Alignment:
Q  169 aacttgaaacgattttc-cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttt 267  Q
    ||||||||| || |||| ||||||||| |||| |||| ||| |||||| || ||| |||||||||||||||||||||| | ||||||||| ||||| | |    
T  12956731 aacttgaaatgaatttctcttcactttgtattatcttaaaaaaccttccaaaaacaattgatcttcagtcttcatatccttgattcttcatgtgatatct 12956632  T
Q  268 tgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
    || ||||  |||||| ||||||  ||| |         |||||||| |||    ||||||||||||||||||||||||||||| | ||||||| ||||||    
T  12956631 tggtttatcgatttatatgattcttcacta--------caaaacacctatagagttacatgatttaggataaaagtgaattacgatgactcgagtgaaaa 12956540  T
Q  368 caatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||| || ||| |||||||||||||||||| |||||    
T  12956539 caatacaatattttcctcaaaccattgacaactcctctaa 12956500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 187 - 416
Target Start/End: Original strand, 13583403 - 13583622
Alignment:
Q  187 ttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatg 286  Q
    |||||||| ||||||||||||| | ||||||||||||||||| ||||| || ||||||| ||||| |||||| |||||| |||||||   ||||||||||    
T  13583403 ttcactttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcatcatatcctcgatccttcacttgatgtcttgttttgtcgatttacatg 13583502  T
Q  287 atttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttca 386  Q
    |||||||| |       |||||| ||  |          |||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||| |||    
T  13583503 atttctcactaaaaagactcaaaccaact----------atgatttaggataaaactgaattacaaagactcgaataaaaacaatagaaaaggttcctca 13583592  T
Q  387 aaccattgacaactcttctaaatgacttct 416  Q
     || ||| ||||||| ||||| ||||||||    
T  13583593 gactattaacaactcctctaattgacttct 13583622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 186 - 432
Target Start/End: Complemental strand, 11437652 - 11437405
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattc-ttcacgtgatgttttgttttactgatttaca 284  Q
    ||||||| | |||||||||||||   ||||||||||||||||| ||||| | |||||||| | ||| | ||||| |||||| ||||||| | ||||||||    
T  11437652 cttcactctgtattgtcttcaaatgtcttctaagaaccattgaacttcaattttcatatccttgatcctttcacttgatgtcttgttttgccgatttaca 11437553  T
Q  285 tgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttctt 384  Q
    |||||||||| |       ||||||| |||||||   || |||||  || ||| ||| ||||||| || ||||||||||||||||| ||||||  |||||    
T  11437552 tgatttctcactaaaaagactcaaaatacatatggagttgcatgacctatgatgaaactgaattataacgactcgaatgaaaacaacacaaaaatttctt 11437453  T
Q  385 caaaccattgacaactcttctaaatgacttcttatctgccttcaaata 432  Q
    | ||||||||| ||||| ||||| |||||||  || |||||| |||||    
T  11437452 cgaaccattgaaaactcctctaattgacttccaatttgcctttaaata 11437405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 325 - 432
Target Start/End: Original strand, 24584746 - 24584853
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||||||||  ||| |||||||  ||||||||| ||||| |||||||| || ||||    
T  24584746 catgatttatgataaaaatgaattacaatgactcgaatgaaaacaatacaaaaaattcctcaaaccgatgacaactcctctaattgacttctaatttgcc 24584845  T
Q  425 ttcaaata 432  Q
    ||||||||    
T  24584846 ttcaaata 24584853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 401
Target Start/End: Original strand, 28291950 - 28292197
Alignment:
Q  153 tcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgatt 252  Q
    ||||| |||| |||| |||||||||    ||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||     
T  28291950 tcttgcaatggcttggaacttgaaatttattttcttcattttgtattgtcttcaaagaccttctaagaaccattaatcttcaatcttcatatcctcaatc 28292049  T
Q  253 cttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaa 352  Q
    ||||| ||||||| || ||||   ||||||||||| |||||| |       | |||||||| | |||  || ||| | ||||||||||| ||||||| ||    
T  28292050 cttcatgtgatgtcttattttggcgatttacatga-ttctcactaaaaaaacacaaaacacttgtgaagttgcataaattaggataaaactgaattataa 28292148  T
Q  353 agactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
      |||| |||||||| || | ||||||||| |||||||| |||||||||    
T  28292149 caactcaaatgaaaagaacataaaatgttcctcaaaccactgacaactc 28292197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 406
Target Start/End: Complemental strand, 28902320 - 28902101
Alignment:
Q  187 ttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatg 286  Q
    |||||||| ||||||||||||  |||||||||||||||||| |||| | | || ||||| | ||| ||||||||||||| | | |||  |||||||||||    
T  28902320 ttcactttgtattgtcttcaataaccttctaagaaccattggtctttaat-ttaatatcattgatccttcacgtgatgtctcgatttgttgatttacatg 28902222  T
Q  287 atttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttc 385  Q
    |||||||| |        || ||||||| ||||  ||| | || | ||||||||||||||||||||| |||||||||||||||||||||| |||||  ||    
T  28902221 atttctcactactaaacactaaaaacacttatggatttgcgtggtataggataaaagtgaattacaacgactcgaatgaaaacaatacaatatgtttctc 28902122  T
Q  386 aaaccattgacaactcttcta 406  Q
    |||||||| | ||||| ||||    
T  28902121 aaaccattaataactcctcta 28902101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 325 - 427
Target Start/End: Complemental strand, 10867081 - 10866979
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    ||||||||  ||||||| |||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||  |||||||||| |||||| ||||    
T  10867081 catgatttgagataaaactgaattacaacgactcaaatgaaaacaatacaaaatattcctcaaaccattgacaactactctaaatgacctcttatttgcc 10866982  T
Q  425 ttc 427  Q
    |||    
T  10866981 ttc 10866979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 169 - 407
Target Start/End: Original strand, 16052142 - 16052381
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| ||||| ||| ||||||||||||| |||||||||||| ||||| |||| | |||||||||| |  || ||||| ||||||| ||    
T  16052142 aacttgaaatgaattttcttcattttgtattgtcttcaaaaaccttctaagaatcattggtctttaatcttcatatcctttatccttcatgtgatgtctt 16052241  T
Q  269 gttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
    | |||  ||||||| ||||||||||| |        |||||||||| |||    || ||||||||| | |||| |||||||| || ||||||| ||||||    
T  16052242 gatttgttgatttagatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttaaggtaaatgtgaattataacgactcgagtgaaaa 16052341  T
Q  368 caatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    || || || ||||| ||||||||||||||||||| |||||    
T  16052342 cattaaaatatgttattcaaaccattgacaactcctctaa 16052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 14977128 - 14977211
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatg-aaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||| |||||| |||||||||||||||||| |||||    
T  14977128 catgatttaggataaaagtgaattacaatgactcgagtgaaaaacaatacaatatgttcctcaaaccattgacaactcctctaa 14977211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 152 - 407
Target Start/End: Complemental strand, 32239554 - 32239298
Alignment:
Q  152 gtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgat 251  Q
    |||||| |||| |||||||||||||| || ||| ||||||||| ||||||||| ||  ||||| ||| ||||||||| ||||| |||||||||| |  ||    
T  32239554 gtcttgcaatgccttgaaacttgaaatgaattttcttcactttttattgtctttaagaaccttataaaaaccattgaacttcaatcttcatatcctttat 32239455  T
Q  252 tcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
     ||||| ||||||| | | |||    ||||||| ||||||||| |        |||||||||  ||||   || ||||||||| |||||||||||||| |    
T  32239454 ccttcatgtgatgtctcgatttgtcaatttacacgatttctcactacaaaacactcaaaacatttatggagttgcatgatttaagataaaagtgaattgc 32239355  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    || ||||| | | |||||||||||| |||||  |||||||||||||||||| |||||    
T  32239354 aacgactcaagtaaaaacaatacaatatgttactcaaaccattgacaactcctctaa 32239298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 199 - 432
Target Start/End: Original strand, 35135316 - 35135551
Alignment:
Q  199 tgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctc--att 296  Q
    |||||||||| |||| |||| |||||||||| |||| ||| |||| | || || || |||||||||| |||||||   ||||||| |||||||||  |      
T  35135316 tgtcttcaaaaacctcctaataaccattgattttcattctccataccctcaatcctccacgtgatgtcttgttttgtcgatttacctgatttctccaaaa 35135415  T
Q  297 nnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgac 396  Q
           |||||||||||| ||   || ||||||||||||||||| |||||||||| ||||||| | ||||||||||||||||| | | ||||| |||||    
T  35135416 aaaaagactcaaaacacatgtggagttgcatgatttaggataaaaatgaattacaatgactcgagtaaaaacaatacaaaatgtacctaaaacctttgac 35135515  T
Q  397 aactcttctaaatgacttcttatctgccttcaaata 432  Q
    ||||| | | |||||||| |||| | ||||||||||    
T  35135516 aactcctttgaatgactttttatttaccttcaaata 35135551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 429
Target Start/End: Original strand, 13530145 - 13530231
Alignment:
Q  343 tgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaa 429  Q
    |||||| |||||||| |||||||||||||||||||||||| ||||||||| |||| ||| |||||||||| |||||| || ||||||    
T  13530145 tgaatttcaaagacttgaatgaaaacaatacaaaatgttcctcaaaccatcgacatctcctctaaatgacctcttatttgtcttcaa 13530231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 429
Target Start/End: Original strand, 13619684 - 13619770
Alignment:
Q  343 tgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaa 429  Q
    |||||| |||||||| |||||||||||||||||||||||| ||||||||| |||| ||| |||||||||| |||||| || ||||||    
T  13619684 tgaatttcaaagacttgaatgaaaacaatacaaaatgttcctcaaaccatcgacatctcctctaaatgacctcttatttgtcttcaa 13619770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 216 - 377
Target Start/End: Complemental strand, 28074715 - 28074555
Alignment:
Q  216 taagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacat 315  Q
    |||| |||| ||||||||| |||||||||| | ||| |||||  |||||| ||||||| |  ||||||||||||||||| |       ||| |||||| |    
T  28074715 taaggaccactgatcttcattcttcatatccttgatccttcatttgatgtcttgttttgcatatttacatgatttctcactaaaaagactcgaaacacct 28074616  T
Q  316 atgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaa 377  Q
    |||   || |||||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  28074615 atggagttgcatgatttaggataaaagtgaattgcaacgactc-aatgaaaacaatacaaaa 28074555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 152 - 431
Target Start/End: Complemental strand, 31436735 - 31436466
Alignment:
Q  152 gtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgat 251  Q
    |||||| |||| |||| |||||||||  |||||  |||||||| ||||||||||||| ||||   |||||||||||||| ||| |||||||||| || ||    
T  31436735 gtcttgcaatgccttggaacttgaaataattttt-ttcactttgtattgtcttcaaatacct---aagaaccattgatcgtcaatcttcatatcctcaat 31436640  T
Q  252 tcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattaca 351  Q
         ||   |||| |||||||  ||||||||||||||||||| |        ||||||||| ||||   || ||||||||||||||||| | |||||||    
T  31436639 gt---ac---atgtcttgttttgttgatttacatgatttctcactaaaaagattcaaaacacctatgtagttgcatgatttaggataaaactaaattaca 31436546  T
Q  352 aagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
      |||||||||||||| |||| |   | ||| ||||| |||||||||||| ||||||| || |||||| |||||||||||    
T  31436545 ctgactcgaatgaaaaaaatatagtttattcctcaaatcattgacaactcctctaaattacatcttatttgccttcaaat 31436466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 28901369 - 28901443
Alignment:
Q  332 taggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    ||||||||||  ||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||||| ||||    
T  28901369 taggataaaaacgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgacaactcctcta 28901443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 5570142 - 5570239
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    |||||||||| || ||  || |||||| |||||||||||||||||||||  |||||| |||||||||||||| |||||| |||||  |||||||||||    
T  5570142 ctcaaaacacctacgaagttgcatgatataggataaaagtgaattacaacaactcgagtgaaaacaatacaatatgttcctcaaagtattgacaactc 5570239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 326 - 407
Target Start/End: Complemental strand, 16054386 - 16054305
Alignment:
Q  326 atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    ||||| |||||||||| ||||||||||  |||||| ||||||||||||||||||||| | ||| |||||||||||| |||||    
T  16054386 atgatctaggataaaaatgaattacaacaactcgagtgaaaacaatacaaaatgttccttaaatcattgacaactcctctaa 16054305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 196 - 395
Target Start/End: Original strand, 28260181 - 28260381
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttc-atatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctca 294  Q
    |||| |||||||| || || ||||||| ||||||||||| | ||  ||||  | ||| || |||||||||| ||||||| ||||||||||||||||||||    
T  28260181 tattatcttcaaaaactttataagaactattgatcttcaatatttgatatacttgatcctccacgtgatgtcttgttttgctgatttacatgatttctca 28260280  T
Q  295 ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattg 394  Q
     |       |||||||||| ||||   |  ||||||||||||||||  | |||||||| ||||  |||||||| ||||||||||||||  | ||||||||    
T  28260281 ctaaaaagactcaaaacacctatggagtctcatgatttaggataaacctaaattacaacgactaaaatgaaaataatacaaaatgttccaccaaccattg 28260380  T
Q  395 a 395  Q
    |    
T  28260381 a 28260381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 292
Target Start/End: Original strand, 28859121 - 28859227
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||| | |||| ||||| | ||| ||||| ||||||||| | |||    ||||||||    
T  28859121 cttcactttttattgtcttcaaaaaccatctaagaaccattgatctttaatcttgatatccttgatccttcatgtgatgtttaggtttgtccatttacat 28859220  T
Q  286 gatttct 292  Q
    |||||||    
T  28859221 gatttct 28859227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 431
Target Start/End: Original strand, 12774847 - 12774971
Alignment:
Q  307 aaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    ||||||| |||| | || ||||||||||||||||| | |||||||| ||||| ||| |||| |||| ||||||| | |||||||||||| ||| |  |||    
T  12774847 aaaacacctatggtattgcatgatttaggataaaactaaattacaatgactcaaataaaaataatataaaatgtacgtcaaaccattgataaccccgcta 12774946  T
Q  407 aatgacttcttatctgccttcaaat 431  Q
    | |||| |||||| || ||||||||    
T  12774947 agtgacctcttatttgtcttcaaat 12774971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 24696810 - 24696708
Alignment:
Q  190 actttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatt 289  Q
    ||||| |||| |||||||| ||||||||||||| | || |||||| |||||||||| | ||| ||| | ||||||| ||| |||  ||||||||||||||    
T  24696810 actttgtattttcttcaaaaaccttctaagaacaagtggtcttcaatcttcatatccttgatcctttatgtgatgtcttgatttgttgatttacatgatt 24696711  T
Q  290 tct 292  Q
    |||    
T  24696710 tct 24696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 407
Target Start/End: Original strand, 13081798 - 13082041
Alignment:
Q  167 gaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtt 266  Q
    ||||||||||| || ||| ||||| ||| ||||||||||||  |||||||||||||| |||||||||| | |   |||||| ||| |||||| ||||||     
T  13081798 gaaacttgaaatgaattttcttcattttgtattgtcttcaacaaccttctaagaacccttgatcttcaat-tatttatctttgatccttcacatgatgta 13081896  T
Q  267 ttgttttactgatttacatg---atttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaat 362  Q
    ||  |||  |||||||||||   ||| |||| |        |||||||||| |||||  || |||||| ||||||| || ||||||||||  |||||| |    
T  13081897 ttaatttgatgatttacatgaatattcctcactacaaaactctcaaaacacctatgaagttgcatgatctaggatacaactgaattacaactactcgagt 13081996  T
Q  363 gaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    ||||||| |||||  ||||  ||||| |||||||||||| |||||    
T  13081997 gaaaacactacaacgtgtttctcaaatcattgacaactcctctaa 13082041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 294
Target Start/End: Original strand, 22894392 - 22894520
Alignment:
Q  164 cttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgat 263  Q
    |||| ||||| ||| || ||| ||||||||| ||||||||||||| ||| ||||||||| |||||  |||| |||| ||||| | ||| ||||| |||||    
T  22894392 cttggaacttcaaaagaattttcttcactttgtattgtcttcaaaaaccatctaagaacaattga-attcaatctttatatcattgatccttcatgtgat 22894490  T
Q  264 gttttgttttactgatttacatgatttctca 294  Q
     | ||| ||| | ||||||||||||||||||    
T  22894491 atcttgattttc-gatttacatgatttctca 22894520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 28901217 - 28901302
Alignment:
Q  171 cttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttca 257  Q
    ||||||| || ||| ||||||||| ||||||||||| | ||||| |||||||||||||  |||| |||||||||| | |||||||||    
T  28901217 cttgaaatgaattttcttcactttgtattgtcttcagaaaccttataagaaccattga-attcaatcttcatatcattgattcttca 28901302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 16054543 - 16054478
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttca 234  Q
    ||||||||| || ||| ||||||||| |||| |||||||  |||||||||||||| ||||||||||    
T  16054543 aacttgaaatgaattttcttcactttgtattttcttcaacaaccttctaagaacccttgatcttca 16054478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 11310122 - 11310216
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgt 265  Q
    |||||||||  |||||| |||||||| |||||| |||||| |||||||||||| |||||| ||| | |||||||||| | ||| |||||| ||||||    
T  11310122 aacttgaaataattttc-ttcactttgtattgttttcaaaaaccttctaagaatcattga-cttaaatcttcatatccttgatccttcacatgatgt 11310216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 431
Target Start/End: Original strand, 41505573 - 41505665
Alignment:
Q  339 aaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||||||||||||  ||||||||||||| |||||||||| ||| ||||||     | |||||| ||||||||| |||||| || ||||||||    
T  41505573 aaagtgaattacaacaactcgaatgaaaataatacaaaatattcctcaaacacggtataactctcctaaatgacctcttatttgtcttcaaat 41505665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 400
Target Start/End: Original strand, 22894553 - 22894627
Alignment:
Q  326 atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaact 400  Q
    ||||| || ||||||||||||| |||| || |||| || ||| ||||||| |||| | |||||||||||||||||    
T  22894553 atgatctaagataaaagtgaatcacaatgattcgagtgtaaagaatacaatatgtacctcaaaccattgacaact 22894627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 7e-47; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 151 - 431
Target Start/End: Complemental strand, 25126747 - 25126467
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| |||| |||| ||||||||| || ||| ||||| ||| |||||| ||||||||  |||||||||| ||||||||  |||| ||||||| || |    
T  25126747 cgtcttgcaatgccttggaacttgaaatgaattttcttcattttgtattgtattcaaagattttctaagaactattgatctgtagtcgtcatatcctcaa 25126648  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    | ||||||||||||| || |||| || |||||||||||||||||||       ||||||||||||||    | |||||||||||||||||| ||||||||    
T  25126647 tccttcacgtgatgtcttatttttctaatttacatgatttctcattaaaaagactcaaaacacatatataatcacatgatttaggataaaactgaattac 25126548  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
     | ||||| ||| ||||||||||||||  ||  |||||||||||||||||| || |||||||||||  | |||||||||||    
T  25126547 cacgactcaaataaaaacaatacaaaaaatttctcaaaccattgacaactcctccaaatgacttctattttgccttcaaat 25126467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 152 - 431
Target Start/End: Complemental strand, 26102323 - 26102044
Alignment:
Q  152 gtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgat 251  Q
    ||||||||||  |||||||||||| | || ||| | |||  || ||||||||||||| ||||||||| || |||||||||||| |||||||||| | |||    
T  26102323 gtcttgaaattccttgaaacttgagatgaattttcctcaacttgtattgtcttcaaaaaccttctaaaaatcattgatcttcattcttcatatccttgat 26102224  T
Q  252 tcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattaca 351  Q
      |||||||||||| |||||||   ||||| || ||| ||||| |       ||||||||||  |||   || |||||||||||||||||||||||||||    
T  26102223 cattcacgtgatgtcttgttttgtcgatttgcacgatatctcactaaaaagactcaaaacacccatggagttgcatgatttaggataaaagtgaattaca 26102124  T
Q  352 aagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |  ||||||||||||||||||||||||| || |||||||||||| || |  |||||||||| |||||| ||| |||||||    
T  26102123 acaactcgaatgaaaacaatacaaaatggtcctcaaaccattgataaattctctaaatgacctcttatttgcgttcaaat 26102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 431
Target Start/End: Complemental strand, 31313774 - 31313539
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    ||||||||||||| ||||| |||||| |||||||||||| |||||||||  |  || ||||||||||||| ||||||| |  ||||||||||||||| |     
T  31313774 tattgtcttcaaaaaccttataagaatcattgatcttcattcttcatattcttaatccttcacgtgatgtattgtttttccaatttacatgatttcttac 31313675  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |       |||||||||| |||||  || |||||||||||||||||||||||||||| |||| ||| ||||||||||||||| |||| | ||  ||||||    
T  31313674 taaaaaaactcaaaacacctatgaagttgcatgatttaggataaaagtgaattacaacgacttgaacgaaaacaatacaaaacgttcctaaagacattga 31313575  T
Q  396 caactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||  |||||||||  |||||| |||||||||||    
T  31313574 caacttctctaaatgaactcttatttgccttcaaat 31313539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 169 - 398
Target Start/End: Original strand, 11769859 - 11770089
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| ||||||||| ||||||||||||| |||||||||||||||||| |||||| |||||||||||| |||  |||| ||||||| ||    
T  11769859 aacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatatctttgatcattcatgtgatgtctt 11769958  T
Q  269 gttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
    | |||   |||||||||||||||||| |        ||||| ||||  ||||  || |||||||||||||||||||||||||||| ||| ||| ||||||    
T  11769959 gatttttcgatttacatgatttctcactgcaaaacactcaacacacccatgaagtttcatgatttaggataaaagtgaattacaacgacacgagtgaaaa 11770058  T
Q  368 caatacaaaatgttcttcaaaccattgacaa 398  Q
    |||||||| |||||| | |||||||||||||    
T  11770059 caatacaatatgttccttaaaccattgacaa 11770089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 153 - 431
Target Start/End: Original strand, 15298720 - 15298997
Alignment:
Q  153 tcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgatt 252  Q
    ||||| |||| |||| ||||||||| || |||  ||||| || ||||| ||||||| | ||| ||||||||||||||||| | |||||||||| |||||     
T  15298720 tcttgtaatgacttggaacttgaaatgaattttattcacattgtattg-cttcaaataacttttaagaaccattgatcttgaatcttcatatcctcgatc 15298818  T
Q  253 cttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaa 352  Q
    ||| || |||| | ||||||| | |||||||||||||| ||| |       | |||||||| |||||  || |||||||| |||||||| | ||||||||    
T  15298819 ctttacatgatttcttgttttgccgatttacatgatttatcactaaatagacacaaaacacctatgaagttgcatgattttggataaaacttaattacaa 15298918  T
Q  353 agactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
     || || |||||| |||||||||||  ||| |||||||||||||||||||| |||||||||||| || ||||| |||||    
T  15298919 tgattcaaatgaatacaatacaaaaacttcctcaaaccattgacaactcttgtaaatgacttctaatttgcctgcaaat 15298997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 151 - 433
Target Start/End: Original strand, 19257653 - 19257933
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| |||| |||| || ||||||  | ||| ||||||||| |||||||||||||||||||||||||||  ||||| |||| |||||||||| ||||    
T  19257653 cgtcttgcaatgccttggaaattgaaataaattttcttcactttgtattgtcttcaaagaccttctaagaac--ttgatgttcaatcttcatatcctcga 19257750  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    |  |||| ||||||| ||||| | |  ||||||| ||||||||| |       |||||||||| || |   || |||||||||||||||||  |||||||    
T  19257751 tctttcatgtgatgtcttgttatgccaatttacacgatttctcactaaaaatactcaaaacacctaaggacttgcatgatttaggataaaatcgaattac 19257850  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaatat 433  Q
    || |||| |||||||||||||||| || |||| ||||| ||||||||||   ||||||||| |||| || |  ||||||||||    
T  19257851 aatgactagaatgaaaacaatacagaaagttcctcaaatcattgacaacctctctaaatgaattctaatttttcttcaaatat 19257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 153 - 414
Target Start/End: Original strand, 26854169 - 26854428
Alignment:
Q  153 tcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgatt 252  Q
    ||||| |||| |||| ||||| ||| || ||| ||||||||| ||||||||||||| | ||||||||||||||||| ||||| |||||||||| | |||     
T  26854169 tcttgcaatgccttggaacttcaaatgaattttcttcactttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcttcatatcattgatc 26854268  T
Q  253 cttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaa 352  Q
    |||||| | |||| ||||||| | | |||||||||||||||  |       |||||||||  |||||  ||  |||| ||||||||||| ||||||||||    
T  26854269 cttcacttaatgtcttgttttgccggtttacatgatttctc--taaaaagactcaaaacatctatgaagttgtatgaattaggataaaattgaattacaa 26854366  T
Q  353 agactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgactt 414  Q
     |||| ||||||||| ||||||||| |||| ||||| |||| ||||||  ||||| ||||||    
T  26854367 cgacttgaatgaaaagaatacaaaaagttcctcaaaacattaacaacttctctaattgactt 26854428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 167 - 407
Target Start/End: Original strand, 25494352 - 25494583
Alignment:
Q  167 gaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtt 266  Q
    |||| |||||| || ||| ||||||||| ||||||||||||| |||||||||||||||||| |||||| |||||||||||| | | ||| | |||||||     
T  25494352 gaaatttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatatctt-gctccttaatgtgatgtc 25494450  T
Q  267 ttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaa 366  Q
    ||| |||   |||||||||||||||||| |         |||||||| ||||   || ||||||||||||||||||| |||||||| ||||| |  ||||    
T  25494451 ttgatttgtcgatttacatgatttctcacta--------caaaacacctatgtagttgcatgatttaggataaaagtaaattacaaggactcaagagaaa 25494542  T
Q  367 acaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||| |||| |||||| |||||||||||||||||| |||||    
T  25494543 acaagacaatatgttcctcaaaccattgacaactcctctaa 25494583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 169 - 407
Target Start/End: Complemental strand, 30675733 - 30675495
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| ||||||||| |||| |||||||| |||||||||||||||||||| |||| |||||| ||  | ||| |||||| |||||| ||    
T  30675733 aacttgaaatgaattttcttcactttgtattatcttcaaaaaccttctaagaaccattgat-ttcaatcttcacattcttgatccttcacatgatgtctt 30675635  T
Q  269 gttttactgatttacatgatttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
       || | |||||||||||||||||| |        |||||||||| ||||   || |||||| ||||| ||||||| ||||||| ||||||| ||||||    
T  30675634 aaattgccgatttacatgatttctcactataaaacactcaaaacacctatggagttgcatgatataggacaaaagtgtattacaacgactcgagtgaaaa 30675535  T
Q  368 caatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||| |||||| |||||||||||||||||| |||||    
T  30675534 caatacaatatgttcctcaaaccattgacaactcctctaa 30675495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 210 - 431
Target Start/End: Complemental strand, 34381919 - 34381695
Alignment:
Q  210 accttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnn---ctc 306  Q
    ||||| ||| |||||||||||||||  ||||||||| | |||  |||||||||||||||| |||   ||||||||| |||| ||| |          |||    
T  34381919 accttataacaaccattgatcttcaaacttcatatccttgatctttcacgtgatgttttgatttgtcgatttacattatttttcactatacaaaatactc 34381820  T
Q  307 aaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    ||||||| |||||  || | |||||||| ||| ||||||||||||| ||||||||||||||||||| || ||||||||||||||||| ||||||| ||||    
T  34381819 aaaacacctatgaagttgcgtgatttagaatagaagtgaattacaacgactcgaatgaaaacaatataatatgttcttcaaaccattaacaactcctcta 34381720  T
Q  407 aatgacttcttatctgccttcaaat 431  Q
    ||| || |||||| |||||||||||    
T  34381719 aattacatcttatttgccttcaaat 34381695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 218 - 431
Target Start/End: Complemental strand, 18795381 - 18795168
Alignment:
Q  218 agaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatat 317  Q
    |||| |||| ||||||| | |||||||||| ||| | ||| ||||||| ||||||| |||||||||| ||||||||| |       |||||||||| |||    
T  18795381 agaatcattcatcttcacttttcatatctttgatccatcatgtgatgtcttgttttgctgatttacacgatttctcactaaaatgactcaaaacacctat 18795282  T
Q  318 gattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttctt 417  Q
    ||   |  |||| ||||||||||||| ||||||||  |||| ||||||||| ||||||||||||| |||||||||||| || || |||||||||| ||||    
T  18795281 gaagctgtatgacttaggataaaagtaaattacaattactcaaatgaaaacgatacaaaatgttcctcaaaccattgataaatcctctaaatgacctctt 18795182  T
Q  418 atctgccttcaaat 431  Q
    || | |||||||||    
T  18795181 attttccttcaaat 18795168  T

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Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 151 - 406
Target Start/End: Original strand, 52271092 - 52271347
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| |||  |||| || |||||| || ||| ||||||||| ||||||||||||| |||||||||| |||||||| ||||| |||||||||| ||||    
T  52271092 cgtcttgcaattccttggaatttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagtaccattgaacttcaatcttcatatcctcga 52271191  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    | |||||||||  |||||||||| | ||||||||| |||||||| |       |||||||||  ||||   || ||| ||||||||  ||||||||| ||    
T  52271192 tccttcacgtggcgttttgttttgccgatttacataatttctcactaaaaagactcaaaacatctatggagttgcataatttaggaataaagtgaatgac 52271291  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    || ||||  |||||||| | |||| ||  ||| |||||||| ||||||||| ||||    
T  52271292 aacgacttaaatgaaaaaagtacacaaatttcctcaaaccaatgacaactcctcta 52271347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 196 - 432
Target Start/End: Original strand, 27461073 - 27461310
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgtttta-ctgatttacatgatttctca 294  Q
    ||||||||||||| ||||| |||||||||||||||||||  ||||||||| |||||  |||| ||||||| |||||||  | || ||||||||||||| |    
T  27461073 tattgtcttcaaaaaccttttaagaaccattgatcttcatacttcatatcctcgatctttcatgtgatgtcttgttttttccgacttacatgatttctta 27461172  T
Q  295 ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattg 394  Q
     |       ||  |||||| |||||  || ||| ||||||||||||||||||||| ||  ||| |||||||||||||||||||||||| |||||  || |    
T  27461173 ctaaaaagactacaaacacctatgaagttgcataatttaggataaaagtgaattataacaacttgaatgaaaacaatacaaaatgttcctcaaattatgg 27461272  T
Q  395 acaactcttctaaatgacttcttatctgccttcaaata 432  Q
    |||| |  |||||||||| |||||| ||  ||||||||    
T  27461273 acaattgctctaaatgacctcttatttgtattcaaata 27461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 399
Target Start/End: Original strand, 18300879 - 18301099
Alignment:
Q  180 attttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgat 279  Q
    ||||| ||||||| | ||||||||||||| |||||||||||||||||| | || | |||||||||| | ||| ||||||||||||| ||| |||    ||    
T  18300879 atttttcttcactctgtattgtcttcaaaaaccttctaagaaccattggtatttaatcttcatatccttgatccttcacgtgatgtcttgatttgtctat 18300978  T
Q  280 ttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaat 378  Q
    ||||||||||  ||| ||       |||||||||| |||||  || ||||||||  ||||||||| |||||||| ||||  || ||||||| ||||| ||    
T  18300979 ttacatgattcatcactttaaaacactcaaaacacctatgaagttgcatgattttcgataaaagtcaattacaacgactttaaagaaaacagtacaatat 18301078  T
Q  379 gttcttcaaaccattgacaac 399  Q
     ||| ||||||||||||||||    
T  18301079 attcctcaaaccattgacaac 18301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 406
Target Start/End: Complemental strand, 12810415 - 12810334
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    |||||| |||||||||| |||||||||| |||| ||||||||||||||||| |||||| |||||||||||||||||| ||||    
T  12810415 catgatctaggataaaaatgaattacaacgacttgaatgaaaacaatacaatatgttcctcaaaccattgacaactcctcta 12810334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 375
Target Start/End: Original strand, 25727791 - 25727981
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    |||||||||  |||||||||||| |||||| |||||||||||||||||| |||||||||| |  || ||||| ||||| | ||| |||   |||||||||    
T  25727791 cttcactttggattgtcttcaaaaaccttccaagaaccattgatcttcaatcttcatatccttaatccttcatgtgatatattgatttgtcgatttacat 25727890  T
Q  286 gatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaa 375  Q
    ||||||||| |        |||||||||| |||    || |||||||||||||||||||||||||||| || | || ||||||||||||||    
T  25727891 gatttctcactacaaaacactcaaaacacctattgagttgcatgatttaggataaaagtgaattacaacgattagagtgaaaacaatacaa 25727981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 375
Target Start/End: Original strand, 25736199 - 25736389
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    |||||||||  |||||||||||| |||||| |||||||||||||||||| |||||||||| |  || ||||| ||||| | ||| |||   |||||||||    
T  25736199 cttcactttggattgtcttcaaaaaccttccaagaaccattgatcttcaatcttcatatccttaatccttcatgtgatatattgatttgtcgatttacat 25736298  T
Q  286 gatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaa 375  Q
    ||||||||| |        |||||||||| |||    || |||||||||||||||||||||||||||| || | || ||||||||||||||    
T  25736299 gatttctcactacaaaacactcaaaacacctattgagttgcatgatttaggataaaagtgaattacaacgattagagtgaaaacaatacaa 25736389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 392
Target Start/End: Complemental strand, 21548915 - 21548674
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| |||| |||| ||||| ||| || |||  ||||  || |||| ||||||||   ||||||||||||||| | ||||| ||||||||||  | |    
T  21548915 cgtcttgtaatgccttggaacttcaaatgaatttttttcaacttgtattatcttcaaatgtcttctaagaaccatttagcttcaatcttcatatccacaa 21548816  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    ||||| ||||||||| ||||||| | ||||||| ||||||| || |       ||| |||||| ||||   || |||  |||||||||||| ||||||||    
T  21548815 ttctttacgtgatgtcttgtttttccgatttacttgatttcacactagaaagactccaaacacttatggagttgcattttttaggataaaactgaattac 21548716  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaaaccat 392  Q
    || ||||||||||||||||||| |||| |||  |||||||||    
T  21548715 aacgactcgaatgaaaacaatataaaaagtttctcaaaccat 21548674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 304 - 400
Target Start/End: Original strand, 25266346 - 25266442
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaact 400  Q
    ||||||||||||||||  || ||||||  | ||||||| |||||||||| ||||||| |||||||||||||| ||||| |||| |||||||||||||    
T  25266346 ctcaaaacacatatgaagttccatgatccaagataaaaatgaattacaatgactcgagtgaaaacaatacaatatgtttttcataccattgacaact 25266442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 326 - 406
Target Start/End: Complemental strand, 50047273 - 50047193
Alignment:
Q  326 atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    ||||||||||||||||||||||||| | ||||||| |||||||||||||| |||||  ||||| |||||||||||| ||||    
T  50047273 atgatttaggataaaagtgaattaccatgactcgagtgaaaacaatacaatatgtttctcaaatcattgacaactcctcta 50047193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 432
Target Start/End: Complemental strand, 18391175 - 18391068
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    |||||| |||||||||||| |||||||| ||||| |||||||| |||| ||||||||  |||||||||||||||||  | |||||||| |||||| || |    
T  18391175 catgatctaggataaaagttaattacaacgactcaaatgaaaataatataaaatgttactcaaaccattgacaacttctttaaatgacatcttatttgtc 18391076  T
Q  425 ttcaaata 432  Q
    || |||||    
T  18391075 tttaaata 18391068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 431
Target Start/End: Original strand, 15416866 - 15417101
Alignment:
Q  197 attgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatct-tcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    |||||||| ||| ||||| ||||||||||||||||||| ||||||||||  | ||| ||||| ||| ||| ||| ||| | || |||||||||||  |      
T  15416866 attgtctttaaaaaccttataagaaccattgatcttcattcttcatatcccttgatccttcatgtggtgtcttgctttgccgaattacatgatttgacta 15416965  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |       |||||||||| |||    || ||||||||| ||||||||||||||| || || | |||||||||||||| ||||||||  |||||||||  |    
T  15416966 taaaaagactcaaaacacctatacagttgcatgatttaagataaaagtgaattaaaatgaattgaatgaaaacaataaaaaatgtttctcaaaccatgaa 15417065  T
Q  396 caactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||| | |||||||  |||||| || ||||||||    
T  15417066 caactcctttaaatgatctcttatttgtcttcaaat 15417101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 21550933 - 21551007
Alignment:
Q  357 tcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||| ||| || |||||||||||    
T  21550933 tcgaatgaaaacaatacaaaatgttcctcaaaccatagacaactcctctaattgacctctgatttgccttcaaat 21551007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 406
Target Start/End: Complemental strand, 26657725 - 26657488
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| ||||||||| | ||||||||||| ||||| ||||||| ||||| ||||  | |||||| | | ||| |||||| | |||| ||    
T  26657725 aacttgaaatgaattttcttcactttgttttgtcttcaaaaaccttataagaactattga-cttcgattttcatagccttgatccttcacctaatgtctt 26657627  T
Q  269 gttttactgatttacatgatttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
    | |||   |||||||||||||| ||| |        |||||||||| ||||   || | |||| ||||||||||||||||||||| || |||| ||||||    
T  26657626 gatttgtcgatttacatgatttttcactacaaaacactcaaaacacctatggagttgcgtgatctaggataaaagtgaattacaacgaatcgagtgaaaa 26657527  T
Q  368 caatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    |||||||  || ||| |||||||||||||||||| ||||    
T  26657526 caatacattatattcctcaaaccattgacaactcctcta 26657488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 19884265 - 19884190
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaact 400  Q
    |||||||||||||||||| ||||||||  || |||||||||||||||| |||| |||| |||||||||||| ||||    
T  19884265 catgatttaggataaaagagaattacatcgaatcgaatgaaaacaatataaaaggttcctcaaaccattgataact 19884190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 186 - 397
Target Start/End: Original strand, 25730453 - 25730665
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    |||||||||  |||||| ||||| |||||| |||||||||||||||| | ||||||| || | ||| ||||| ||||| | ||| |||   |||||||||    
T  25730453 cttcactttcgattgtcgtcaaaaaccttccaagaaccattgatcttaaatcttcatctccttgatccttcatgtgatatcttgatttgtcgatttacat 25730552  T
Q  286 gatttctc-attnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttctt 384  Q
    ||||||||  |        |||||||||| | |||  || ||||||||||||||||| |||||| ||| || | ||||||||||||||||| | | || |    
T  25730553 gatttctcgctacaaaacactcaaaacacctgtgaagttgcatgatttaggataaaattgaatttcaatgatttgaatgaaaacaatacaatacgctcct 25730652  T
Q  385 caaaccattgaca 397  Q
    ||| |||||||||    
T  25730653 caagccattgaca 25730665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 12423780 - 12423845
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttca 234  Q
    ||||||||| || ||||||||||||| ||||||||||||  |||||||||||||| ||||||||||    
T  12423780 aacttgaaatgaatttccttcactttgtattgtcttcaacaaccttctaagaacctttgatcttca 12423845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 25373995 - 25373871
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| |||||  || ||||||||| ||  |||||||||||||||||| |||| | |||||||||| | ||| |||||  |||||||||    
T  25373995 aacttgaaatgaattttcttcatcttgtattgtcttaaacaaccttctaagaaccattggtctttaatcttcatatcctggatccttcaattgatgtttt 25373896  T
Q  269 gttttactgatttacatgatttctc 293  Q
     |||| | ||||||||| |||||||    
T  25373895 cttttgccgatttacattatttctc 25373871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 399
Target Start/End: Original strand, 12423915 - 12424010
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaac 399  Q
    |||||||||||||||   || |||||| || ||||||| |||||||||| ||||||| |||||||||||  | |||||| |||||||||| |||||    
T  12423915 ctcaaaacacatatggagttgcatgatctaagataaaactgaattacaatgactcgagtgaaaacaatatcatatgttcctcaaaccattaacaac 12424010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 13807753 - 13807840
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaacca 391  Q
    |||||||||  |||||  || |||||||  |||| || ||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  13807753 ctcaaaacaactatgaagttgcatgattagggatgaacgtgaattacaacgacttgaatgaaaacaatacaaaatgttcatcaaacca 13807840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 23223505 - 23223422
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatg-aaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    ||||||||||||||||||| |||||||| || |||| || |||| |||||||  ||||| |||||||||||||||||| |||||    
T  23223505 catgatttaggataaaagtaaattacaacgaatcgagtgaaaaaaaatacaatgtgttcctcaaaccattgacaactcctctaa 23223422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 23519634 - 23519758
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    |||||||||  | ||| ||||||||| ||||||||||||  |||||||||||||||||| |||||| | |||||||  | ||| |||||||| |||| ||    
T  23519634 aacttgaaataaattttcttcactttctattgtcttcaacaaccttctaagaaccattggtcttcaat-ttcatattcttgatccttcacgtaatgtctt 23519732  T
Q  269 gttttactgatttacatgatttctca 294  Q
    | | |   ||||||||||||||||||    
T  23519733 gatgtgtcgatttacatgatttctca 23519758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 431
Target Start/End: Complemental strand, 25373866 - 25373773
Alignment:
Q  338 aaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||| |||||||| ||||| ||||||||||||||||  ||||| |||||  ||||| | ||||||||||| ||   |||| |||||||||||    
T  25373866 aaaagttaattacaacgactcaaatgaaaacaatacaatttgttcctcaaataattgaaacctcttctaaattacaatttatttgccttcaaat 25373773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 31319504 - 31319553
Alignment:
Q  197 attgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatct 246  Q
    |||||||||||| | ||||||||||||||||||||||| | |||||||||    
T  31319504 attgtcttcaaaaaacttctaagaaccattgatcttcattattcatatct 31319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 375
Target Start/End: Complemental strand, 30782009 - 30781803
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagt-cttcatatcttcgattcttcacgtgatgttt 267  Q
    |||||||||  | ||| ||||||||| ||||||||||||  ||||| |||||||| |||||||||| | ||||||  | | ||| |||||| |||||| |    
T  30782009 aacttgaaatcaattttcttcactttgtattgtcttcaacaaccttttaagaacccttgatcttcaattcttcat--ccttgatccttcacatgatgtct 30781912  T
Q  268 tgttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaa 366  Q
    || |||  |||||||||||||| |||| |        |||||||||| ||||   ||  ||||| | |||||||| |||||||||| | ||||| |||||    
T  30781911 tgatttgatgatttacatgattcctcactacaaaacactcaaaacacctatggagttgtatgatcttggataaaactgaattacaatgtctcgattgaaa 30781812  T
Q  367 acaatacaa 375  Q
    |||||||||    
T  30781811 acaatacaa 30781803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 406
Target Start/End: Original strand, 23519780 - 23519858
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    |||||| ||||||||||||||||||||| |||| || ||||   ||||||| |||||| |||||| ||| |||||| |||||    
T  23519780 catgatctaggataaaagtgaattacaatgacttgagtgaa---aatacaatatgttcctcaaactattaacaacttttcta 23519858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 25665617 - 25665700
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttca 234  Q
    ||||||| |||| |||| ||||| ||| |||||| ||||||||| ||||||||| ||| |  || ||||||||||||| |||||    
T  25665617 cgtcttgcaatgccttggaacttcaaatgatttttcttcactttgtattgtctttaaatattttataagaaccattgaacttca 25665700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 23223663 - 23223537
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaaga-ccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttt 267  Q
    ||||||||| || |||  |||||||| ||||||||||||| | ||||||| |||  |||| | |||| |||||||||| | || |||||| | ||||| |    
T  23223663 aacttgaaatgaatttttttcactttgtattgtcttcaaaaaaccttctatgaattattggttttcaatcttcatatccttgaatcttcatgcgatgtct 23223564  T
Q  268 tgttttactgatttacatgatttctca 294  Q
    ||  ||  |||||||||||||||||||    
T  23223563 tgacttgttgatttacatgatttctca 23223537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 23506022 - 23505941
Alignment:
Q  152 gtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttca 234  Q
    |||||| | ||||||| ||||||||| || ||| ||||||||| |||||||||||||   |||| ||| ||||||||||||||    
T  23506022 gtcttgcattgtcttggaacttgaaatgaattttcttcactttgtattgtcttcaaatgtcttccaag-accattgatcttca 23505941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 50047424 - 50047330
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgat 263  Q
    ||||| ||| || ||| ||||| ||| ||||||||||||  ||||| |||| |||||||||||||| | |||||| | | ||| |||||||||||    
T  50047424 aacttaaaatgaattttcttcattttgtattgtcttcaataaccttttaagtaccattgatcttcaatattcatacccttgatccttcacgtgat 50047330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 419
Target Start/End: Original strand, 25965414 - 25965490
Alignment:
Q  343 tgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttat 419  Q
    |||||||||| ||||||||||| || |||||||||| ||  |||||| ||  ||||||| | |||||||| ||||||    
T  25965414 tgaattacaacgactcgaatgagaagaatacaaaatattgctcaaactatgtacaactcctttaaatgacctcttat 25965490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 203 - 432
Target Start/End: Complemental strand, 26159971 - 26159742
Alignment:
Q  203 ttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnn 302  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |  || |||||| |||||| ||||||| ||||| |||||||||| ||| |          
T  26159971 ttcaaagaccttataagaaccattgatcttcaatcttcatatcctgaatccttcacatgatgtcttgttttgctgatctacatgatttttcactaaaaag 26159872  T
Q  303 nctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactct 402  Q
     ||||||||||||||||  ||  || |||||||| |||| | |||||||| ||||||||||||||||||||||||||||  | |||| ||||||||||||    
T  26159871 actcaaaacacatatgaagttggataatttaggacaaaactaaattacaacgactcgaatgaaaacaatacaaaatgtttcttaaactattgacaactct 26159772  T
Q  403 tctaaatgacttcttatctgccttcaaata 432  Q
    | |||||||| |||||| | | ||||||||    
T  26159771 tataaatgacctcttatttacgttcaaata 26159742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 202 - 431
Target Start/End: Complemental strand, 10576669 - 10576440
Alignment:
Q  202 cttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnn 301  Q
    ||||||| ||||||||| || ||| | |||| | |||||||||| ||||| |||||| |||||| ||||||| | ||||||||| |||||||| |         
T  10576669 cttcaaaaaccttctaaaaatcatagttctttattcttcatatcctcgatccttcacatgatgtcttgtttttccgatttacataatttctcactagaaa 10576570  T
Q  302 nnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
       ||||||||| |||||  ||  || |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||     
T  10576569 gaatcaaaacacctatgaagttgtataatttagaataaaagtgaattacaatgactcgaatgaaaacaatacaaaatgttcttcaaaccatggacaactt 10576470  T
Q  402 ttctaaatgacttcttatctgccttcaaat 431  Q
     |||||||||  |||||| | |||||||||    
T  10576469 ctctaaatgatctcttattttccttcaaat 10576440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 212 - 432
Target Start/End: Complemental strand, 29437677 - 29437455
Alignment:
Q  212 cttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaac 311  Q
    ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||| |||| || | ||||||||||||||||||||       ||||||||    
T  29437677 cttctaagaaccattgaacttcaatcttcatatcctcgatccttcacgtgatgtcttgtcttgccgatttacatgatttctcattaaaaagactcaaaac 29437578  T
Q  312 acatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaata--caaaatgttcttcaaaccattgacaactcttctaaat 409  Q
    |  |||||  || ||||||||||||||||| |||||||| || ||||||||||||| || |  |||||  ||| |||||| ||||||||||| ||||| |    
T  29437577 agctatgaagttgcatgatttaggataaaactgaattacgaatactcgaatgaaaaaaaaaatcaaaaaattcctcaaactattgacaactcatctaatt 29437478  T
Q  410 gacttcttatctgccttcaaata 432  Q
    || |||| || ||||||||||||    
T  29437477 gagttctaatttgccttcaaata 29437455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 151 - 341
Target Start/End: Original strand, 31859748 - 31859938
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    |||||||||||| |||| |||||||||  | ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||    
T  31859748 cgtcttgaaatgccttggaacttgaaataaattttcttcactttgtattgtcttcaaataccttctaagaaccattgatcttcaatattcatatcctcga 31859847  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaa 341  Q
    | |||||| || ||| ||||||| |||||||||||||||||||| |       |||||||||| ||||   || |||||||||||||||||    
T  31859848 tccttcacctggtgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaacacctatgcagttgcatgatttaggataaaa 31859938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 213 - 431
Target Start/End: Complemental strand, 21167935 - 21167716
Alignment:
Q  213 ttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgtttta-ctgatttacatgatttctcattnnnnnnnctcaaaac 311  Q
    ||||||||| ||||||| |||| |||||| ||| ||| | |||||||| |||| |||||||  | |||||||||||||||||| |       ||||||||    
T  21167935 ttctaagaagcattgattttcattcttcacatcctcgctacttcacgttatgtcttgttttttccgatttacatgatttctcactaaaaagtctcaaaac 21167836  T
Q  312 acatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatga 411  Q
    || |||||  ||||||  |||||||||||||| ||||||||  |||||||||||||||||||||||||||| | ||| ||| |||||||| |||||||||    
T  21167835 acctatgaagttacatattttaggataaaagtaaattacaacaactcgaatgaaaacaatacaaaatgttccttaaaacatggacaactcctctaaatga 21167736  T
Q  412 cttcttatctgccttcaaat 431  Q
    | |||||| | |||||||||    
T  21167735 cgtcttattttccttcaaat 21167716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 159 - 431
Target Start/End: Complemental strand, 23353877 - 23353610
Alignment:
Q  159 aatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcac 258  Q
    |||| |||| ||||||||| || ||| ||||||||| ||||||||| |||||||||||||   | ||||||||| | |||||||||| | | | |||||     
T  23353877 aatgccttggaacttgaaatgaattttcttcactttgtattgtcttaaaagaccttctaa---ctattgatctttaatcttcatatccttg-tccttcat 23353782  T
Q  259 gtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactc 358  Q
    ||||||| ||||||| | |||||||||||||||||| |       ||||||||||  |||| | | || ||||||  |||||| |||||||||| |||||    
T  23353781 gtgatgtcttgttttgccgatttacatgatttctcactaaaaagactcaaaacactcatgaatgtgcacgatttat-ataaaattgaattacaacgactc 23353683  T
Q  359 gaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||||||||||||||||| |||| | |||||||||| || |  |||||||||||||| ||||| ||||||||    
T  23353682 gaatgaaaacaatacaaaaagttccttaaaccattgataattactctaaatgacttctaatctgacttcaaat 23353610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 409
Target Start/End: Complemental strand, 46647417 - 46647205
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctc-a 294  Q
    |||| |||| ||| ||||| ||||||||||||||||||| | |||||||||| ||| | ||||||||||| ||||||| |||||||| |||||||||| |    
T  46647417 tattatctttaaaaaccttttaagaaccattgatcttcatttttcatatctttgatccctcacgtgatgtcttgttttgctgatttatatgatttctcga 46647318  T
Q  295 ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattg 394  Q
    |        |||||  ||| ||||   || |||||||||||||||||||||||||||  |||| |||||||||||||||||||| ||||| |||||||||    
T  46647317 taaaaataactcaa--cacttatggagttgcatgatttaggataaaagtgaattacaccgactagaatgaaaacaatacaaaatattcttgaaaccattg 46647220  T
Q  395 acaactcttctaaat 409  Q
    ||||||  |||||||    
T  46647219 acaacttctctaaat 46647205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 161 - 431
Target Start/End: Complemental strand, 19602055 - 19601785
Alignment:
Q  161 tgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgt 260  Q
    ||||||| ||| ||||| || ||| || |||||| ||||||||||||| ||||| |||||||||||| |||||| || ||||||| |||||  |||||||    
T  19602055 tgtcttggaacatgaaatgaattttctccactttttattgtcttcaaaaaccttttaagaaccattg-tcttcaatcatcatatcctcgatctttcacgt 19601957  T
Q  261 gatgttttgttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcg 359  Q
    ||||| ||| |||  ||||||||||||||||||| |        || |||| || ||||   || ||||||||||||||||||||||||||||  | | |    
T  19601956 gatgtcttgatttgttgatttacatgatttctcactagaaaacgctaaaaatacctatggagttgcatgatttaggataaaagtgaattacaacaatttg 19601857  T
Q  360 aatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||||| |||| |||| |||| |||||||| ||||||||| ||||| |||||| | || |||||| ||||    
T  19601856 aatgaaaaaaatagaaaaagttcctcaaaccaatgacaactcctctaattgacttttaatttgcctttaaat 19601785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 159 - 431
Target Start/End: Complemental strand, 21077492 - 21077220
Alignment:
Q  159 aatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcac 258  Q
    |||| |||| ||||||||| || |||  |||| ||| |||||||||| |  |||||||||||||||||||| |||| || ||||| ||||||| || |||    
T  21077492 aatgccttggaacttgaaatgaattttattcaatttgtattgtcttcgattaccttctaagaaccattgatattcaatcctcataacttcgatcctccac 21077393  T
Q  259 gtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactc 358  Q
     || ||| ||||||| |  ||||||||||||| ||| |       |  ||||||| ||||   ||  |||||||  ||||||| |||| ||||| |||||    
T  21077392 ttggtgtcttgttttgccaatttacatgatttttcactaaaaagaccaaaaacacctatggaatttgatgatttgtgataaaattgaactacaacgactc 21077293  T
Q  359 gaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||| |||| ||||||||| |||  |||||||||||||||||| |||||||||||||| || |||||||||||    
T  21077292 gaataaaaataatacaaaaggtttctcaaaccattgacaactcctctaaatgacttctaatttgccttcaaat 21077220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 152 - 431
Target Start/End: Complemental strand, 33519296 - 33519027
Alignment:
Q  152 gtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgat 251  Q
    |||| |||||| |||| || |||||| || ||| |||||  || ||||||||||||||||||||||||||| ||||||||||| || ||||||| || ||    
T  33519296 gtctggaaatgccttggaatttgaaatgaattttcttcaacttgtattgtcttcaaagaccttctaagaacgattgatcttcaatcgtcatatcctcaat 33519197  T
Q  252 tcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattaca 351  Q
    |||||| | ||||||||| ||| | |||| ||||||||||||| |       |||||||||| || ||  || ||||||||| ||||||| ||||||       
T  33519196 tcttcaagagatgttttgatttgccgattcacatgatttctcactaaaaagactcaaaacacctacgaagttgcatgatttaagataaaactgaatt--- 33519100  T
Q  352 aagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
           |||||||||| ||||||||| ||| |||||| || ||||||||  |||||| || |||||| |||||||||||    
T  33519099 -------gaatgaaaacgatacaaaatattcctcaaactatcgacaactcccctaaataacctcttatttgccttcaaat 33519027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 210 - 401
Target Start/End: Complemental strand, 9288418 - 9288227
Alignment:
Q  210 accttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaa 309  Q
    |||| ||||||||||||| |||||| |||||||||| | ||| |||||| |||||| ||||||| | |||||||||||||||||| |       || |||    
T  9288418 acctgctaagaaccattggtcttcaatcttcatatccttgatccttcacttgatgtcttgttttgccgatttacatgatttctcactaaaaagactaaaa 9288319  T
Q  310 acacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    | |||||||    ||||||||||| ||||||| ||||||| || ||||| ||||||||||||||||  ||||| |||||||||||| |||||    
T  9288318 aaacatatggaggtacatgatttatgataaaaatgaattataatgactcaaatgaaaacaatacaatttgttcctcaaaccattgaaaactc 9288227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 322 - 432
Target Start/End: Complemental strand, 24925901 - 24925791
Alignment:
Q  322 ttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatct 421  Q
    |||||||||||| |||||||||||||||||  ||||| ||||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||| |    
T  24925901 ttacatgatttatgataaaagtgaattacagcgactcaaatgaaaacaatacaaaatgttactcaaacgattgacaactcttttaaatgacttcttattt 24925802  T
Q  422 gccttcaaata 432  Q
      |||||||||    
T  24925801 atcttcaaata 24925791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 407
Target Start/End: Original strand, 34864161 - 34864395
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||| ||| || ||| ||||| ||| |||||||| |||| ||||||||||||||||||| ||||| ||| |||||||| ||| ||||||||||||| ||    
T  34864161 aactttaaatgaattttcttcattttgtattgtctacaaaaaccttctaagaaccattga-cttcaatctccatatctttgatccttcacgtgatgtctt 34864259  T
Q  269 gttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
    | |||   |||||||||||||||||| |        ||||||||||||  || ||| ||| |||||||||||||||||||||||| ||  ||| ||||||    
T  34864260 gatttgtcgatttacatgatttctcactacaaaacactcaaaacacat-ggagttt-cataatttaggataaaagtgaattacaatga--cgagtgaaaa 34864355  T
Q  368 caatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||  | | |||| |||||||||||||||||| |||||    
T  34864356 caatatgatacgttcctcaaaccattgacaactcctctaa 34864395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 305 - 431
Target Start/End: Original strand, 17339815 - 17339941
Alignment:
Q  305 tcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttc 404  Q
    ||||||||| |||||  || ||||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||| |||| |||| || ||||| ||    
T  17339815 tcaaaacacctatgaaattgcatgatttaggataaaattgaattacaaagactagaatgaaaaagatacaaaatgttcctcaatccatggataactcctc 17339914  T
Q  405 taaatgacttcttatctgccttcaaat 431  Q
    |||||| | |||||| |||||| ||||    
T  17339915 taaatgtcctcttatttgcctttaaat 17339941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 387
Target Start/End: Complemental strand, 17187440 - 17187207
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| ||||||||||||||||||| || ||| ||| ||||| ||||||||||||| | ||||||||||||| ||| ||||| |||||||||| || |    
T  17187440 cgtcttgcaatgtcttgaaacttgaaatgaattttctttactttgtattgtcttcaaataacttctaagaaccactgaacttcaatcttcatatcctcaa 17187341  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    |  ||||| |||||| || ||||   |||||||||||||| ||| |       |||  ||||| |||||  || |||||||||||||||||||| |||      
T  17187340 tcattcacttgatgtgttattttgtcgatttacatgatttatcactaaaaagactc--aacacctatgaagttgcatgatttaggataaaagtg-atttt 17187244  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaa 387  Q
    |  ||||| ||||||||||||| |||| |||| ||||    
T  17187243 agtgactcaaatgaaaacaataaaaaaagttcctcaa 17187207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 406
Target Start/End: Original strand, 1676317 - 1676398
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||||| ||||    
T  1676317 catgatataggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaaccattgacaactcctcta 1676398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 406
Target Start/End: Original strand, 1682845 - 1682926
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||||| ||||    
T  1682845 catgatataggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaaccattgacaactcctcta 1682926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 22119739 - 22119633
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    |||||||| || ||||||| |||||||| |||||||| ||||||| |||||  ||||| |||||||||||||||||| | ||||| |||||| || ||||    
T  22119739 catgattttgggtaaaagtaaattacaatgactcgaacgaaaacattacaatttgttcctcaaaccattgacaactcctataaataacttctaatttgcc 22119640  T
Q  425 ttcaaat 431  Q
    |||||||    
T  22119639 ttcaaat 22119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 400
Target Start/End: Original strand, 47024648 - 47024853
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    ||||||||| || ||| |||||| ||||||||||||||||||| ||||| ||||||| || | ||| ||||| | ||||| ||| |||   |||||||||    
T  47024648 cttcactttgtactgttttcaaaaaccttctaagaaccattga-cttcaatcttcatgtccttgatccttcatgcgatgtcttgatttttcgatttacat 47024746  T
Q  286 gatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttc 385  Q
    ||||||||| |         ||||||||   |||  || |||||| |||||||||||||||||| || | ||||| |||||||||||||| || || |||    
T  47024747 gatttctcacta--------caaaacaccattgaagttgcatgatctaggataaaagtgaattagaacggctcgagtgaaaacaatacaatatatttttc 47024838  T
Q  386 aaaccattgacaact 400  Q
    |||||||||||||||    
T  47024839 aaaccattgacaact 47024853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 382
Target Start/End: Complemental strand, 15192452 - 15192239
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||  |||||||||  |||||||||||  |||||||||||||||||| |||||| | |||||||| | ||| ||||||||||||| ||    
T  15192452 aacttgaaatgaattgtcttcactttgaattgtcttcaacaaccttctaagaaccattggtcttcaat-ttcatatccttgatccttcacgtgatgtctt 15192354  T
Q  269 gttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
    | |||   |||||||||||||||||| |        |||||||||| ||||    | || ||| |||||||||||||||||||||  ||| || ||||||    
T  15192353 ggtttgtcgatttacatgatttctcactacaaaacactcaaaacacctatggagctgcacgatctaggataaaagtgaattacaacaacttgagtgaaaa 15192254  T
Q  368 caatacaaaatgttc 382  Q
    |||||||| ||||||    
T  15192253 caatacaatatgttc 15192239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 27302871 - 27302796
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaact 400  Q
    |||||| ||| ||| || |||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||    
T  27302871 catgatctagtatataattgaattacaatgactcgagtgaaaacaatacaaaatgttcctcaaaccattgacaact 27302796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 407
Target Start/End: Original strand, 5906738 - 5906824
Alignment:
Q  321 tttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||||||| |||||||||||||||  || ||||||| ||||||||||| || |||||| ||||||||||||||| || |||||    
T  5906738 tttacatgatttgggataaaagtgaattgtaatgactcgagtgaaaacaatataatatgttcctcaaaccattgacaattcctctaa 5906824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 7024070 - 7024188
Alignment:
Q  155 ttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattct 254  Q
    ||||||||||||  ||||| | | || ||| |||||  || |||| |||||||  | |||||||||||||||| |||||| |||||||||||| ||| ||    
T  7024070 ttgaaatgtcttagaactttatatgaattttcttcatcttgtattatcttcaagaatcttctaagaaccattggtcttcaatcttcatatctttgatcct 7024169  T
Q  255 tcacgtgatgttttgtttt 273  Q
    ||||||||||| |||||||    
T  7024170 tcacgtgatgtcttgtttt 7024188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 406
Target Start/End: Original strand, 25315232 - 25315334
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactctt 403  Q
    |||||||| ||||||   || |||||| |||||||||| | |||||||| ||||| | |||||||||||||| |||||| ||||| |||||||||||| |    
T  25315232 ctcaaaacccatatggagttgcatgatctaggataaaacttaattacaacgactcaagtgaaaacaatacaatatgttcctcaaagcattgacaactcct 25315331  T
Q  404 cta 406  Q
    |||    
T  25315332 cta 25315334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 13064657 - 13064552
Alignment:
Q  187 ttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatg 286  Q
    ||||||||  |||||||||||| ||| ||||||||||||||| ||||| || || |||| | ||| ||||||||||||| ||| ||| |  |||||||||    
T  13064657 ttcactttgaattgtcttcaaataccctctaagaaccattgaacttcaatcgtcttatccttgatccttcacgtgatgtcttgatttgccaatttacatg 13064558  T
Q  287 atttct 292  Q
    ||||||    
T  13064557 atttct 13064552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 391
Target Start/End: Complemental strand, 18444451 - 18444277
Alignment:
Q  217 aagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacata 316  Q
    |||||||||||||||||| ||||  |||| ||||| ||||||||||||| ||||||| | ||||||||||| ||| ||         || |||| || ||    
T  18444451 aagaaccattgatcttcaatctttgtatcatcgatccttcacgtgatgtcttgttttgcagatttacatgacttcccacggaaaagacttaaaataccta 18444352  T
Q  317 tgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaacca 391  Q
    ||   || | ||||||||||||||| |||||||||  | |||||||||||||| ||||||  |||| ||||||||    
T  18444351 tggagttgcgtgatttaggataaaactgaattacagcggctcgaatgaaaacattacaaagagttcctcaaacca 18444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 326 - 418
Target Start/End: Original strand, 13275767 - 13275859
Alignment:
Q  326 atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttctta 418  Q
    ||||||| |||| ||||||||||| || |||||||||||||||||||||| |||||  |||||||||  |||| || |||||| ||| |||||    
T  13275767 atgatttgggatgaaagtgaattataacgactcgaatgaaaacaatacaacatgtttctcaaaccatgtacaaatcctctaaaagacctctta 13275859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 12111360 - 12111435
Alignment:
Q  332 taggataaaagtgaattacaaagactcgaatgaaaacaa-tacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    ||||||||||||||||||||| ||||||  |||||| || ||||| |||||| |||||||||||||||||| ||||    
T  12111360 taggataaaagtgaattacaacgactcgtgtgaaaaaaaatacaatatgttcctcaaaccattgacaactcctcta 12111435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 4732838 - 4732757
Alignment:
Q  330 tttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatga 411  Q
    |||||||||||  | |||||||| ||||| ||||||||||||| ||||||||| |||||  |||||||| || |||||||||    
T  4732838 tttaggataaatttaaattacaacgactcaaatgaaaacaatataaaatgttcatcaaaggattgacaattcctctaaatga 4732757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 12111191 - 12111286
Alignment:
Q  167 gaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatg 264  Q
    ||||||||||| || ||| ||||||||| |||| |||| ||| ||||| ||||||||||||| ||||| | |||||||||| ||| ||||||||||||    
T  12111191 gaaacttgaaatgaattttcttcactttgtattatcttaaaaaaccttataagaaccattga-cttcaatattcatatctt-gatccttcacgtgatg 12111286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 398
Target Start/End: Complemental strand, 18898231 - 18898011
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| ||| ||||| |||||| |||||| ||||| ||||||||| ||| ||||| ||| |||| | | ||| ||||| ||||||| ||    
T  18898231 aacttgaaatgaattttctttactttgtattgtattcaaaaaccttttaagaaccactga-cttcaatctgcataccctggatccttcatgtgatgtctt 18898133  T
Q  269 gttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaac 368  Q
    | |||   |||||||||||||||||| |         |||||||| |||||  || |||  | || || ||||| ||||||||| | ||||| |||||||    
T  18898132 gatttgtcgatttacatgatttctcacta--------caaaacacctatgaagttgcatagtctatgaaaaaagcgaattacaacggctcgagtgaaaac 18898041  T
Q  369 aatacaaaatgttcttcaaaccattgacaa 398  Q
    ||||||| |||||| | |||||||||||||    
T  18898040 aatacaatatgttccttaaaccattgacaa 18898011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 431
Target Start/End: Original strand, 9783016 - 9783111
Alignment:
Q  336 ataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||| |||||||||| || | || |||||||||||||| |||||| |||||| ||||||||||| ||||| |  | ||| || |||||||||||    
T  9783016 ataaaactgaattacaatgaattgagtgaaaacaatacaatatgttcctcaaactattgacaactcctctaactctcatctcatttgccttcaaat 9783111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 1695869 - 1695935
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaacca 391  Q
    |||||| |||||||||| |||||||||||||||| ||| ||| |||||||| |||||| | ||||||    
T  1695869 catgatctaggataaaattgaattacaaagactcaaataaaaccaatacaatatgttcctgaaacca 1695935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 10320248 - 10320322
Alignment:
Q  332 taggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttcta 406  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||| |||||  || ||| ||| ||||||| ||||    
T  10320248 taggataaaagtgaattacaacgactcgagtgaaaagaatacaatatgtttctctaactattaacaactcgtcta 10320322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 380
Target Start/End: Complemental strand, 20044346 - 20044216
Alignment:
Q  250 attcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaatta 349  Q
    ||||| || ||| ||| ||| |||||||| ||||||||||| ||| |       ||||||| |||||||   || ||||||| ||||  ||| |||||||    
T  20044346 attctccatgtggtgtcttgctttactgaattacatgatttttcaataaaaagactcaaaatacatatggagttgcatgattaaggaagaaattgaatta 20044247  T
Q  350 caaagactcgaatgaaaacaatacaaaatgt 380  Q
    ||| ||||||||||||||||||| |||||||    
T  20044246 caatgactcgaatgaaaacaatataaaatgt 20044216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 4733022 - 4732954
Alignment:
Q  152 gtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaaga 220  Q
    ||||||||||| ||||||| |||||| || ||| |||||  || ||||||||| |||||||||||||||    
T  4733022 gtcttgaaatgccttgaaatttgaaatgaattttcttcaacttgtattgtctttaaagaccttctaaga 4732954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 22119887 - 22119794
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatc 245  Q
    ||||||| |||| |||| |||||||||  | |||  | |||||| ||||||| ||||| ||| ||||||||||||||||||||| | ||||||||    
T  22119887 cgtcttgcaatgacttggaacttgaaattaattttgtacacttt-tattgtcctcaaaaaccctctaagaaccattgatcttcaatattcatatc 22119794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 27303026 - 27302972
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaacc 223  Q
    ||||| ||| || ||| |||||||||||| |||||||||| ||||||||||||||    
T  27303026 aacttaaaatgaattttcttcactttataatgtcttcaaaaaccttctaagaacc 27302972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 4953771 - 4953699
Alignment:
Q  326 atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    ||||| |||||||||| |||||||| ||   | || |||||||||||||| |||||| |||||||||| |||||||    
T  4953771 atgatataggataaaactgaattacgaa---ttgagtgaaaacaatacaatatgttcctcaaaccattaacaactc 4953699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 5906631 - 5906691
Alignment:
Q  172 ttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatctt 232  Q
    |||||| || ||| ||| ||||| |||| |||||||| ||||||||||||||||| |||||    
T  5906631 ttgaaatgaattttcttaactttgtattatcttcaaaaaccttctaagaaccattaatctt 5906691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 409
Target Start/End: Original strand, 53001219 - 53001283
Alignment:
Q  345 aattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaat 409  Q
    |||||||| || ||||||||||| |||| ||||| | |||||||||||  ||||||| |||||||    
T  53001219 aattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaacaactcctctaaat 53001283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 151 - 367
Target Start/End: Original strand, 26499694 - 26499910
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| |||| |||||||||||||| || ||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||    
T  26499694 cgtcttgcaatgccttgaaacttgaaatgaattttctttactttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatcctcga 26499793  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    |  |||||||| | | ||||||| | ||||| |||||||||||| |       |||| ||||| |||||  ||||||||||||||||||||  |||||||    
T  26499794 tctttcacgtggtatcttgttttgccgatttgcatgatttctcactaaaaacactcataacacctatgaaattacatgatttaggataaaatcgaattac 26499893  T
Q  351 aaagactcgaatgaaaa 367  Q
    || |||| |||||||||    
T  26499894 aacgacttgaatgaaaa 26499910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 153 - 431
Target Start/End: Original strand, 26512628 - 26512905
Alignment:
Q  153 tcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgatt 252  Q
    |||||||||| |||||||||||| | || |||   |||  || |||||| |||| ||||||| |||||||||||||||||||  ||||||||| | ||||    
T  26512628 tcttgaaatgccttgaaacttgagatgaatttttatcatcttgtattgtgttcacagaccttttaagaaccattgatcttcatccttcatatccttgatt 26512727  T
Q  253 cttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaa 352  Q
    |||||| || | | |||||| |  | |||||||||||||||| |       |||||||||  |||    || |||||| |||| ||||||||||||||||    
T  26512728 cttcacatgttttcttgtttcatcg-tttacatgatttctcactaggaagactcaaaacagctatcgggttgcatgatctaggttaaaagtgaattacaa 26512826  T
Q  353 agactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
     || |||||||||||||||||||||||||   ||||||||||||||||| |||||||||| |||||| |||||||||||    
T  26512827 cgaatcgaatgaaaacaatacaaaatgttacacaaaccattgacaactcctctaaatgacctcttatttgccttcaaat 26512905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 153 - 431
Target Start/End: Original strand, 26517744 - 26518021
Alignment:
Q  153 tcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgatt 252  Q
    |||||||||| |||||||||||| | || |||   |||  || |||||| |||| ||||||| |||||||||||||||||||  ||||||||| | ||||    
T  26517744 tcttgaaatgccttgaaacttgagatgaatttttatcatcttgtattgtgttcacagaccttttaagaaccattgatcttcatccttcatatccttgatt 26517843  T
Q  253 cttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaa 352  Q
    |||||| || | | |||||| |  | |||||||||||||||| |       |||||||||  |||    || |||||| |||| ||||||||||||||||    
T  26517844 cttcacatgttttcttgtttcatcg-tttacatgatttctcactaggaagactcaaaacagctatcgggttgcatgatctaggttaaaagtgaattacaa 26517942  T
Q  353 agactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
     || |||||||||||||||||||||||||   ||||||||||||||||| |||||||||| |||||| |||||||||||    
T  26517943 cgaatcgaatgaaaacaatacaaaatgttacacaaaccattgacaactcctctaaatgacctcttatttgccttcaaat 26518021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 210 - 431
Target Start/End: Original strand, 12972291 - 12972512
Alignment:
Q  210 accttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaa 309  Q
    |||||| |||||||||||||||||| |||||||||| |||||  ||||||| |||| ||| ||| |||||||||||||||||||  |       ||||||    
T  12972291 accttcaaagaaccattgatcttcaatcttcatatcatcgatctttcacgttatgtcttggttttctgatttacatgatttctccctaaaaagactcaaa 12972390  T
Q  310 acacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaat 409  Q
    |||| |||||  || |||||||||||||| || |||||||||| | || |||||||| ||||||||||| |||   ||| |||||||||||| |||||||    
T  12972391 acacgtatgaagttgcatgatttaggatacaactgaattacaacgtcttgaatgaaagcaatacaaaattttccgtaaaacattgacaactcctctaaat 12972490  T
Q  410 gacttcttatctgccttcaaat 431  Q
    ||| |||||  |||||||||||    
T  12972491 gacctcttagttgccttcaaat 12972512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 152 - 428
Target Start/End: Original strand, 9942998 - 9943274
Alignment:
Q  152 gtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgat 251  Q
    |||||||||||||||| ||||||| | || ||| |  ||  ||| |||||||| ||| ||||| ||||| |||||||| |||| |||||||||| | | |    
T  9942998 gtcttgaaatgtcttggaacttgagatgaattttccccaacttacattgtctttaaaaaccttataagagccattgattttcattcttcatatccttggt 9943097  T
Q  252 tcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattaca 351  Q
     ||| |  | |||| ||||||| | |||||||||||||||||| |       || ||||||| ||||   || |||||||||||||||||||||||||||    
T  9943098 ccttgatttaatgtcttgtttttccgatttacatgatttctcaataaaaatactaaaaacacctatggagttgcatgatttaggataaaagtgaattaca 9943197  T
Q  352 aagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttca 428  Q
    |   || |||||| ||| ||||||||| ||| |||||| || |||||||| |||||||||| |||||| || |||||    
T  9943198 acagcttgaatgataactatacaaaatattcctcaaacgatggacaactcctctaaatgacctcttatttgtcttca 9943274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 431
Target Start/End: Original strand, 14924310 - 14924545
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    ||||||||||||| || ||| | |||||||||||||||| | |||||||||  | |||||||  |||||| ||||||  ||| ||||||||||||||||     
T  14924310 tattgtcttcaaaaacattccatgaaccattgatcttcaattttcatatctctggttcttcatttgatgtcttgtttagctggtttacatgatttctcac 14924409  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |       |||||||| | |||    || |||||||||| ||||||||||  ||||| |||||||||||| |  ||| ||| ||||| ||||||||||||    
T  14924410 ttaaaagactcaaaacccctatataattgcatgatttagaataaaagtgaggtacaacgactcgaatgaataagatataaattgttcctcaaaccattga 14924509  T
Q  396 caactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||| ||||||| || | |||| |||||||||||    
T  14924510 caactcctctaaattacatattatttgccttcaaat 14924545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 16439680 - 16439481
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    |||| ||||||||  | |||||||||||||||||||||| ||||||||||   |||  ||||  |||||| ||||||| ||||||||||||||||||||     
T  16439680 tattttcttcaaaaccattctaagaaccattgatcttcattcttcatatccctgatctttcatctgatgtcttgtttttctgatttacatgatttctcac 16439581  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |       |||||||||||| |||  || ||| ||||||||||||||| ||||| || ||||| ||| ||||||||||||| ||| | |||||| |||||    
T  16439580 taaaaagactcaaaacacatgtgaagttgcattatttaggataaaagttaattataacgactc-aataaaaacaatacaaattgtccctcaaactattga 16439482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 33638388 - 33638495
Alignment:
Q  187 ttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatg 286  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||| |||||||||| | ||| |||||| |||| | ||||||| | ||||||||||    
T  33638388 ttcactttgtattatcttcaaagaccttataagaaccattgatcttcaatcttcatatccttgatccttcacttgatatattgttttgccgatttacatg 33638487  T
Q  287 atttctca 294  Q
    ||||||||    
T  33638488 atttctca 33638495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 196 - 431
Target Start/End: Original strand, 9396499 - 9396727
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    ||||||||||||| |  ||||||||| | |||||||||| ||||| | || | ||| ||||||||||||| ||||||| | |||||| |||||||||||     
T  9396499 tattgtcttcaaaaaatttctaagaatcgttgatcttcattcttcttgtccttgatccttcacgtgatgtcttgttttgccgattta-atgatttctcac 9396597  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |       ||||||||||||||||  || |||||||||| |||||  |||||||| ||      |||||||||||||||| |||||| |  |||||||||    
T  9396598 taaaaagactcaaaacacatatgaagttgcatgatttagaataaagatgaattaccaa------aatgaaaacaatacaagatgttcctataaccattga 9396691  T
Q  396 caactcttctaaatgacttcttatctgccttcaaat 431  Q
      |||| |||||||||| |||||| | |||||||||    
T  9396692 ttactcctctaaatgacctcttattttccttcaaat 9396727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 431
Target Start/End: Original strand, 32930428 - 32930600
Alignment:
Q  259 gtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactc 358  Q
    ||||||| ||||||| |  ||||||||||||||||| |       |||||||||  ||| |  || |||| || ||||||||||||||||| || |||||    
T  32930428 gtgatgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacatctatcaaattgcatgtttaaggataaaagtgaattaaaacgactc 32930527  T
Q  359 gaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
      ||| |||||| |||||||||||  ||||||||||||||||| |||||||||| |||||| |||||||||||    
T  32930528 ttatggaaacaaaacaaaatgttccgcaaaccattgacaactcctctaaatgacatcttatttgccttcaaat 32930600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 169 - 398
Target Start/End: Original strand, 17860314 - 17860543
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| ||||||||| |||||||| |||| ||||||||||||||||||  ||||| | ||| |||  |  || |||||||||||||  |    
T  17860314 aacttgaaatgaattttcttcactttgtattgtctacaaaaaccttctaagaaccattgtccttcaat-ttcttatactttatccttcacgtgatgtcct 17860412  T
Q  269 gttttactgatttacatgatttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
    | |||  ||| ||||||||||||||| |        |||||| ||| ||||   || ||||||||| ||||||||| ||| |||| ||||||| ||||||    
T  17860413 gatttgttgaattacatgatttctcactacaaaacactcaaagcacgtatggagttgcatgatttaagataaaagtaaatgacaatgactcgagtgaaaa 17860512  T
Q  368 caatacaaaatgttcttcaaaccattgacaa 398  Q
     |||||||||||||| |||||||||||||||    
T  17860513 taatacaaaatgttcctcaaaccattgacaa 17860543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 400
Target Start/End: Complemental strand, 30355566 - 30355344
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || |||  |||||||| ||||||||||||| ||||||||||||| ||||||||||| |||||||||| ||||| ||||| |||| || ||    
T  30355566 aacttgaaatgaattttattcactttttattgtcttcaaaaaccttctaagaacgattgatcttcaatcttcatatcctcgatccttcatgtgaggtctt 30355467  T
Q  269 gttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaac 368  Q
    | |||   ||||||| ||| | || | |         |||||||| ||| |  || ||||||||| ||||||||||||||| || |||| || ||||||     
T  30355466 ggtttgtcgatttacgtgaatccttacta--------caaaacacctataaagttgcatgatttatgataaaagtgaattaaaacgacttgagtgaaaa- 30355376  T
Q  369 aatacaaaatgttcttcaaaccattgacaact 400  Q
    ||||||| |||||  |||||||||||||||||    
T  30355375 aatacaatatgtttatcaaaccattgacaact 30355344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 304 - 432
Target Start/End: Original strand, 20495795 - 20495922
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactctt 403  Q
    |||||||||| |||||  || ||| ||||| ||||||| |||||||||| ||||| ||| |||||||| |||||||||| |||||||||||| ||||  |    
T  20495795 ctcaaaacacttatgaagttgcataatttaagataaaattgaattacaacgactcaaataaaaacaat-caaaatgttcctcaaaccattgataacttct 20495893  T
Q  404 ctaaatgacttcttatctgccttcaaata 432  Q
    ||| ||||| |||||  ||||||||||||    
T  20495894 ctatatgacctcttaattgccttcaaata 20495922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 407
Target Start/End: Original strand, 14768158 - 14768372
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    |||| |||| ||||||||||||| |||||||| |||| |||||  |||| || |||||||||       ||| ||||||| ||||||| | |||||||||    
T  14768158 cttcgctttctattgtcttcaaataccttctatgaacgattgaatttcattcatcatatctt-------tcatgtgatgtcttgttttgccgatttacat 14768250  T
Q  286 gatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttc 385  Q
    |||||||   |       |||||||||  |||||  || |||| ||||| ||||| |||||||||||  |||||||||||| ||||||||||  ||| ||    
T  14768251 gatttctatctgaaaagactcaaaacatttatgaaattgcatgttttagaataaatgtgaattacaataactcgaatgaaaccaatacaaaaaattcctc 14768350  T
Q  386 aaaccattgacaactcttctaa 407  Q
    |||||| ||||||||| |||||    
T  14768351 aaaccaatgacaactcctctaa 14768372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 13759473 - 13759555
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||| ||| |||||| |||||||||| || |||| |||||||||| ||| |||||| |||||||||||||||||| |||||    
T  13759473 catgatatagaataaaattgaattacaacgattcgagtgaaaacaattcaatatgttcctcaaaccattgacaactcctctaa 13759555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 15575173 - 15575054
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagt-cttcatatcttcgattcttcacgtgatgttt 267  Q
    ||||||||| || ||| ||||||||| |||||||||||| ||||||||||||||| |||||||||| | ||||||  | | ||| ||||||||||||| |    
T  15575173 aacttgaaatgaattttcttcactttgtattgtcttcaacgaccttctaagaacccttgatcttcaattcttcat--cgttgatccttcacgtgatgtct 15575076  T
Q  268 tgttttactgatttacatgatt 289  Q
    || |||  | ||||||||||||    
T  15575075 tgatttgttaatttacatgatt 15575054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 294
Target Start/End: Original strand, 24507303 - 24507432
Alignment:
Q  164 cttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgat 263  Q
    |||| |||||||||  | ||| ||||||||| |||| |||||| | | ||||||| |||||||| |||||| |||||||||| || || |||||||||||    
T  24507303 cttggaacttgaaataaattttcttcactttgtattttcttcataaaacttctaacaaccattg-tcttcaatcttcatatcgtcaatccttcacgtgat 24507401  T
Q  264 gttttgttttactgatttacatgatttctca 294  Q
    || ||| |||  ||||||||| |||||||||    
T  24507402 gtcttgatttgttgatttacaggatttctca 24507432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 33638317 - 33638259
Alignment:
Q  187 ttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatc 245  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  33638317 ttcactttgtattatcttcaaagaccttataagaaccattgatcttcaatcttcatatc 33638259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 431
Target Start/End: Original strand, 17198788 - 17198880
Alignment:
Q  336 ataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||| ||||||||||  ||||  ||||||||||||||||| |||| |||||||||| |||||   |||||||||||||| || |||||||||||    
T  17198788 ataaaactgaattacaacaactcagatgaaaacaatacaaaaagttcctcaaaccattaacaac---tctaaatgacttctaatttgccttcaaat 17198880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 362
Target Start/End: Complemental strand, 24617693 - 24617567
Alignment:
Q  236 tcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttagg 335  Q
    |||||||||| | ||  |||||| |||||| ||||||| ||||||||||| |||||||| |       ||||||||||  ||||  ||||||||||||||    
T  24617693 tcttcatatccttgacccttcacatgatgtcttgttttgctgatttacataatttctcactaaaaagactcaaaacactcatgaagttacatgatttagg 24617594  T
Q  336 ataaaagtgaattacaaagactcgaat 362  Q
    |||||| |||||||| | |||||||||    
T  24617593 ataaaactgaattacgacgactcgaat 24617567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 1755562 - 1755650
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccat 392  Q
    |||||||||| ||||   ||||||||||  ||||| ||||||||||||| || || |||||||||||||||||||| || |||||||||    
T  1755562 ctcaaaacacgtatgtagttacatgattagggatacaagtgaattacaacgaatcaaatgaaaacaatacaaaatgatcctcaaaccat 1755650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 26518564 - 26518660
Alignment:
Q  335 gataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||||     ||||| | ||||||||| |||||||||| |||||| | |||||||||    
T  26518564 gataaaggtgaattacaacgactcgaatgaaaactatacaaaatgcaacacaaactactgacaactcctctaaatgacatcttatttaccttcaaat 26518660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 419
Target Start/End: Original strand, 16387273 - 16387364
Alignment:
Q  328 gatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttat 419  Q
    |||||| |||||  ||||||||||| | ||||||| |||||||||||| |  ||| |||||||||||||||||| ||||||| || ||||||    
T  16387273 gatttaagataacggtgaattacaacggctcgaataaaaacaatacaataaattcctcaaaccattgacaactcatctaaattacatcttat 16387364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 432
Target Start/End: Complemental strand, 22262439 - 22262336
Alignment:
Q  329 atttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttca 428  Q
    |||||||  |||||||||| |||  |||||| ||||||| ||||||| || ||  |||||||||||||||||| ||||||| ||||||||| || ||||     
T  22262439 atttaggtcaaaagtgaatcacatcgactcggatgaaaataatacaatatttttctcaaaccattgacaactcctctaaattacttcttatttgtcttcg 22262340  T
Q  429 aata 432  Q
    ||||    
T  22262339 aata 22262336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 407
Target Start/End: Complemental strand, 16528002 - 16527901
Alignment:
Q  306 caaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttct 405  Q
    |||||||| |||||  || |||||| |||||||||| |||||||||| ||||||| ||||||||||| || ||| |  ||||||||  |||||||| |||    
T  16528002 caaaacacctatgaagttgcatgatctaggataaaaatgaattacaacgactcgagtgaaaacaatataatatggtactcaaaccaccgacaactcctct 16527903  T
Q  406 aa 407  Q
    ||    
T  16527902 aa 16527901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 431
Target Start/End: Original strand, 24507623 - 24507712
Alignment:
Q  342 gtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||||| || ||| |||||||||||||||||||| |||| |||||| |||||||| || |||||  ||||||| || | |||||||||    
T  24507623 gtgaattaaaacgacacgaatgaaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaat 24507712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 410
Target Start/End: Original strand, 33638517 - 33638590
Alignment:
Q  336 ataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatg 410  Q
    |||||| |||||||||| |||| |||||||||| |||| |||| || |||||||||||||||| || ||||||||    
T  33638517 ataaaaatgaattacaatgacttgaatgaaaac-atactaaatatttttcaaaccattgacaaatcctctaaatg 33638590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 24618105 - 24618056
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatc 245  Q
    ||||||||| ||||| |||||||||| |||||||||||| ||||||||||    
T  24618105 tattgtctttaaagatcttctaagaatcattgatcttcaatcttcatatc 24618056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 292
Target Start/End: Original strand, 16387103 - 16387243
Alignment:
Q  152 gtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgat 251  Q
    ||||||||||  ||||||||||||||||| ||| |||||   |||||| |||| |||  |||| |||| ||||||| |||| |  ||||||||| | |||    
T  16387103 gtcttgaaataccttgaaacttgaaacgaattttcttcatcctatattttcttaaaaatccttttaaggaccattggtctttaaacttcatatccttgat 16387202  T
Q  252 tcttcacgtgatgttttgttttactgatttacatgatttct 292  Q
     | |||| | |||| ||| ||| | ||||||||||||||||    
T  16387203 ccctcacctaatgtcttgatttgccgatttacatgatttct 16387243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 23946883 - 23946919
Alignment:
Q  344 gaattacaaagactcgaatgaaaacaatacaaaatgt 380  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23946883 gaattacaaagactcaaatgaaaacaatacaaaatgt 23946919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 13835694 - 13835591
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    |||||||  |||| ||||||||||| |  || || ||| ||||||| || |||||||| ||||||||  |||||||| ||| ||||||||||||| || |    
T  13835694 catgattggggatgaaagtgaattatagtgaatcaaataaaaacaacaccaaatgttcctcaaaccaaggacaactcctcttaatgacttcttatttgtc 13835595  T
Q  425 ttca 428  Q
    ||||    
T  13835594 ttca 13835591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 15575017 - 15574912
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    |||||| |||| ||||| | |||||||| |||| || ||||||||||| || |||||| ||||| ||||||||| || |||||||  | |||||| || |    
T  15575017 catgatctaggctaaaactaaattacaacgactagagtgaaaacaatataacatgttcctcaaa-cattgacaattcctctaaatctcatcttatttgtc 15574919  T
Q  425 ttcaaat 431  Q
    |||||||    
T  15574918 ttcaaat 15574912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 4e-39; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 169 - 407
Target Start/End: Complemental strand, 29544769 - 29544530
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| ||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||| ||||| ||||||| ||    
T  29544769 aacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaagaatcattgatcttcaatcttcatatctttgatccttcatgtgatgtctt 29544670  T
Q  269 gttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
    | |||   ||||||||||||| || | |        |||||||||| ||||   || ||  |||||||| ||||||||||||||| ||||||| ||||||    
T  29544669 ggtttgtcgatttacatgattccttactaaaaaacactcaaaacacttatggaattgcacaatttaggagaaaagtgaattacaacgactcgagtgaaaa 29544570  T
Q  368 caatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||| |||||| |||||| ||||||||||| |||||    
T  29544569 caatacaatatgttcctcaaactattgacaactcctctaa 29544530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 187 - 431
Target Start/End: Complemental strand, 30405825 - 30405583
Alignment:
Q  187 ttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatg 286  Q
    |||||||| |||||| |||||| |||||||||||| |||||| ||||| |||||||||| ||||| |||||| |||| | || |||| | ||||||||||    
T  30405825 ttcactttgtattgtattcaaataccttctaagaatcattgaacttcaatcttcatatcctcgatccttcacatgatttcttattttgccgatttacatg 30405726  T
Q  287 atttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttca 386  Q
    |||||||| |       |||||||||| ||||   || |||| |||||||| |||||||||||||| || || ||| |||||||||||||| |||| |||    
T  30405725 atttctcact-aaaaaactcaaaacacctatggagttgcatggtttaggat-aaagtgaattacaatgagtcaaataaaaacaatacaaaaagttcctca 30405628  T
Q  387 aaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||||| ||||||| ||||| |||||||| || | |||||||||    
T  30405627 aaccattaacaactcctctaattgacttctaatttaccttcaaat 30405583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 151 - 431
Target Start/End: Original strand, 24596851 - 24597131
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| |||| |||| ||||| ||| || ||| ||||||||| |||||||||||||   |||||| |||||| ||| ||||| |||| ||||| ||||    
T  24596851 cgtcttgcaatgccttggaacttcaaatgaattttcttcactttgtattgtcttcaaatttcttctatgaaccactgaacttcaatctttatatcctcga 24596950  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    |  | |||||||||| ||||||| | |||||||| ||||||||| |       || ||||||| || |   || ||||||||||||||||| ||||||||    
T  24596951 tcttccacgtgatgtcttgttttgccgatttacacgatttctcactaaaaagacttaaaacacctacggagttgcatgatttaggataaaattgaattac 24597050  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    || |||||  || |||||||| |||||  | | |||||||||||||||||||||||| |||||||| || | |||||||||    
T  24597051 aacgactcagatcaaaacaatgcaaaaactccatcaaaccattgacaactcttctaattgacttctaattttccttcaaat 24597131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 152 - 401
Target Start/End: Original strand, 20461494 - 20461745
Alignment:
Q  152 gtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtct--tcaaagaccttctaagaaccattgatcttcagtcttcatatcttcg 249  Q
    |||||| |||| | |||||||||||| || ||| ||||||||| ||||||||  | ||| |||||  ||||| |  || |||||| |||||||||| | |    
T  20461494 gtcttgcaatgccctgaaacttgaaaggaatttacttcactttgtattgtctcttaaaataccttgcaagaatcggtggtcttcaatcttcatatccttg 20461593  T
Q  250 attcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaatta 349  Q
    || |||||| |||||| || |||| | |||||||||||||||||| |       ||| |||||| ||| || || | ||||||||||| ||| ||| |||    
T  20461594 atccttcacttgatgtcttattttgccgatttacatgatttctcactaaaaagactcgaaacacctatcatgttgcgtgatttaggatgaaattgagtta 20461693  T
Q  350 caaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  20461694 caacgactcgaatgaaaacaatacaaattgttcctcaaaccattgacaactc 20461745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 216 - 418
Target Start/End: Original strand, 3268878 - 3269080
Alignment:
Q  216 taagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacat 315  Q
    |||||| |||| || |||| |||||||||  | ||| ||||| ||||| | ||||||| | |||||||||||||||||| |       || |||||||||    
T  3268878 taagaatcattaattttcattcttcatatacttgatccttcatgtgatatcttgttttgccgatttacatgatttctcactaaaaagacttaaaacacat 3268977  T
Q  316 atgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttc 415  Q
    | ||  || ||||||||||||||||||||||||||||  |||| || |||||||||||||||||||  |||||||| ||||||||| ||||||| || ||    
T  3268978 acgaagttgcatgatttaggataaaagtgaattacaacaactcaaacgaaaacaatacaaaatgttactcaaaccaatgacaactcctctaaataacctc 3269077  T
Q  416 tta 418  Q
    |||    
T  3269078 tta 3269080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 151 - 409
Target Start/End: Complemental strand, 18496832 - 18496574
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    |||||||||||| |||| ||||||||| || ||| |||||  || |||| |||||||  || ||||||||||||||  |||||| |||||||||| | ||    
T  18496832 cgtcttgaaatgccttggaacttgaaatgaattttcttcatcttgtattttcttcaacaacattctaagaaccattattcttcaatcttcatatccttga 18496733  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    | ||||||  |||||   ||||| | |||||||||||| |||||         |||||||||| |||||  |  ||||||||||||||||| ||||||||    
T  18496732 tccttcactcgatgtcccgtttttccgatttacatgatatctcaccaaataggctcaaaacacctatgaagtcgcatgatttaggataaaaatgaattac 18496633  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaat 409  Q
    || || ||||||||||||||| ||||  |||| |||||| ||||||||||  |||||||    
T  18496632 aatgattcgaatgaaaacaattcaaatagttcctcaaacaattgacaacttctctaaat 18496574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 431
Target Start/End: Complemental strand, 23125147 - 23124887
Alignment:
Q  172 ttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgtt 271  Q
    |||||| || ||| ||||||||| ||||||||| ||  | ||| ||||||||||||| ||||| |||||||||| ||||| |||||| |||||| ||| |    
T  23125147 ttgaaatgaattttcttcactttgtattgtctttaagaatcttataagaaccattgaacttcaatcttcatatcctcgatccttcacatgatgtcttgat 23125048  T
Q  272 ttactgatttacatgatttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaa 370  Q
    |    |||||||||||||||||| |        |||||||||| |||    ||  ||||||| ||||||| ||||||||||| ||||||| |||||||||    
T  23125047 tggtcgatttacatgatttctcactagaaaacactcaaaacacctatagagttgtatgattttggataaatgtgaattacaacgactcgagtgaaaacaa 23124948  T
Q  371 tacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||| |||||| ||| |||| | ||||||| |||||||  | |||||| || ||||||||    
T  23124947 tacaatatgttcctcagaccactaacaactcctctaaatctcatcttatttgtcttcaaat 23124887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 151 - 409
Target Start/End: Complemental strand, 1074720 - 1074461
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||||||||||||| |||||||||  | ||| |||||  || ||||||||||||  ||||| |||||||||||| |||||| | |||||||| | ||    
T  1074720 cgtcttgaaatgtcttggaacttgaaattacttttcttcatcttgtattgtcttcaacaaccttttaagaaccattggtcttcaattttcatatccttga 1074621  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaatta 349  Q
    | ||| || |||||| ||| ||| |  ||||||||||||||||| |        | |||||||| ||||   ||  || ||||||||||||||  |||||    
T  1074620 tcctttacttgatgtcttgcttttccaatttacatgatttctcactaaaaaagacacaaaacacttatggagttgtataatttaggataaaagcaaatta 1074521  T
Q  350 caaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaat 409  Q
    ||| || ||||||||||| |||||||   |||| |||||||||||||||||| |||||||    
T  1074520 caatgaatcgaatgaaaataatacaattggttcctcaaaccattgacaactcctctaaat 1074461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 167 - 265
Target Start/End: Original strand, 21545690 - 21545788
Alignment:
Q  167 gaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgt 265  Q
    ||||||||||| || ||| ||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||| | ||| |||||||||||||    
T  21545690 gaaacttgaaatgaattttcttcactttttattgtcttcaaatactttctaagaaccattgatcttcaatcttcatatccttgatccttcacgtgatgt 21545788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 226 - 407
Target Start/End: Original strand, 1255135 - 1255317
Alignment:
Q  226 tgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnn-ctcaaaacacatatgatttta 324  Q
    ||||||||| ||||| |||| | ||| ||||| ||||||||||| |||  ||||||| || |||| |||||        |||||||||| |||||  ||     
T  1255135 tgatcttcattcttcgtatccttgatccttcatgtgatgttttgatttgttgatttaaataatttttcattacaaaacactcaaaacacctatgaagttg 1255234  T
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||||||  | ||| |||||||||||||||||| |||||    
T  1255235 catgatttaggataaaaatgaattacaatgactcgagtgaaaacaatacaatttattcctcaaaccattgacaactcctctaa 1255317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 375
Target Start/End: Original strand, 8308928 - 8309103
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    |||||||||||||||||||||||||||||||||| | ||     |||| | | ||||||||||||||||| ||||||| |||||||||||||||||| |     
T  8308928 tattgtcttcaaagaccttctaagaaccattgatttccac----cataaccttgattcttcacgtgatgtcttgttttgctgatttacatgatttcttac 8309023  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaa 375  Q
    |       |||||||||  ||||   || ||||||||||||||||| | ||| |||| ||||| ||||||||||||||||    
T  8309024 taaaaagactcaaaacatgtatggagttgcatgatttaggataaaactaaatcacaatgactcaaatgaaaacaatacaa 8309103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 378
Target Start/End: Original strand, 12358655 - 12358836
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| | || ||||||   ||| ||||| ||| | |||||| || ||||||||     
T  12358655 tattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttga-tcttcataagatattttgcttttccgatttatattatttctcac 12358753  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaat 378  Q
    |       |||||||||| |||||  ||  |||||||||||||||| |||||||||| ||||| ||||| || ||||||||||    
T  12358754 taaaaagactcaaaacacctatgaagttgaatgatttaggataaaaatgaattacaacgactcaaatgagaaaaatacaaaat 12358836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 409
Target Start/End: Original strand, 5312678 - 5312891
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    ||||||||||||| | ||||||||||||||| || |||| || ||||||| | ||| |||||| ||||||||  |||| | |||||||||||||| |||     
T  5312678 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtttatttttgccgatttacatgatttatcac 5312777  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |       |||||||||| ||||   || |||| | || |||||||||||||||||| ||||| |||||||||||||||||  |||| | | |||||| |    
T  5312778 taaaaagactcaaaacacctatggagttgcatgctataagataaaagtgaattacaacgactcaaatgaaaacaatacaaatagttccttagaccattaa 5312877  T
Q  396 caactcttctaaat 409  Q
    |||||  |||||||    
T  5312878 caacttctctaaat 5312891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 325 - 400
Target Start/End: Original strand, 21545821 - 21545896
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaact 400  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||||| |||||||||||||||||    
T  21545821 catgatttaggataaaagtgagttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgacaact 21545896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 7956272 - 7956168
Alignment:
Q  327 tgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcctt 426  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||| | ||||| |||||||||| ||||| ||||||| ||  ||||| | ||||    
T  7956272 tgatttaagataaaagcgaattacaacgactcgaatgaaaacaatacaaatttttctttaaaccattgataactcctctaaattacaacttattttcctt 7956173  T
Q  427 caaat 431  Q
    |||||    
T  7956172 caaat 7956168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 17881520 - 17881626
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    ||||||||| ||||||| | |||||||| || ||||||||||| ||||||||| |||| | ||| |||||||||||| | |||||||||||| || ||||    
T  17881520 catgatttatgataaaattaaattacaatgattcgaatgaaaataatacaaaaagttcctaaaatcattgacaactcctttaaatgacttctaatttgcc 17881619  T
Q  425 ttcaaat 431  Q
    |||||||    
T  17881620 ttcaaat 17881626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 197 - 412
Target Start/End: Original strand, 22532538 - 22532752
Alignment:
Q  197 attgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcatt 296  Q
    |||||||||||| || ||||||||||||||||| |||| ||||| |||| ||||| | ||| ||||||| ||| ||| | |||||||||||||||||| |    
T  22532538 attgtcttcaaaaactttctaagaaccattgatattcattcttcgtatcctcgatccatcatgtgatgtcttg-tttgccgatttacatgatttctcact 22532636  T
Q  297 nnnnnnnctcaaaacacatatgattttacatga--tttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattg 394  Q
           |||| |||||  || |  || |||||  |||||||||||||||||||| |  || || ||||||||||||| ||||||||| ||||||||| |    
T  22532637 aaaaatactcataacac--atcaagttccatgatttttaggataaaagtgaattatagcgaatccaatgaaaacaatagaaaatgttcctcaaaccatgg 22532734  T
Q  395 acaactcttctaaatgac 412  Q
    | ||||| |||| |||||    
T  22532735 ataactcctctacatgac 22532752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 307 - 407
Target Start/End: Original strand, 7372569 - 7372670
Alignment:
Q  307 aaaacacatatgattttacatgatttag-gataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttct 405  Q
    ||||||| |||||  || |||||||| | ||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||| |||    
T  7372569 aaaacacctatgaagttgcatgatttcgtgataaaattgaattacaacgactcgaatgaaaacaatacaaaaagttcatcaaaccaatgacaactcctct 7372668  T
Q  406 aa 407  Q
    ||    
T  7372669 aa 7372670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 325 - 401
Target Start/End: Original strand, 22067828 - 22067904
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    |||||| |||||||||| |||||||||| ||||||| |||||||||||||  |||||| ||||||||||||||||||    
T  22067828 catgatctaggataaaattgaattacaatgactcgagtgaaaacaatacattatgttcctcaaaccattgacaactc 22067904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 432
Target Start/End: Complemental strand, 46054791 - 46054684
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    |||||||||  |||||||| |||||||| |||| |||| ||||||||| ||| ||||| ||||| || ||||||||| | |||||||| |||||| ||||    
T  46054791 catgatttattataaaagtaaattacaacgacttgaattaaaacaatataaattgttcctcaaatcaatgacaactcctttaaatgacatcttatttgcc 46054692  T
Q  425 ttcaaata 432  Q
    ||||||||    
T  46054691 ttcaaata 46054684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 401
Target Start/End: Complemental strand, 7142286 - 7142115
Alignment:
Q  231 ttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnn-ctcaaaacacatatgattttacatga 329  Q
    |||| |||||||||||| ||| ||||||||||||| ||| |||   |||||||||||||||||| |        || ||||||| ||||   || |||||    
T  7142286 ttcaatcttcatatctttgatccttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacacttaaaacacctatggagttgcatga 7142187  T
Q  330 tttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    | | ||||||||||||||||||| ||||||| ||||| ||||| || |||||| | ||||||||||||||||    
T  7142186 tcttggataaaagtgaattacaacgactcgagtgaaagcaataaaatatgttccttaaaccattgacaactc 7142115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 37145013 - 37144907
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    ||||||||||||||||| |  ||||||| |||| ||||||||| ||||||||| ||| |||||| || ||||||||| ||||| |||||||  || ||||    
T  37145013 catgatttaggataaaaatatattacaacgacttgaatgaaaataatacaaaaagtttttcaaaacaatgacaactcctctaattgacttcaaatttgcc 37144914  T
Q  425 ttcaaat 431  Q
    |||||||    
T  37144913 ttcaaat 37144907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 329 - 414
Target Start/End: Original strand, 4977846 - 4977931
Alignment:
Q  329 atttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgactt 414  Q
    |||||||||||||||||||||||| |||| |||||| || |||||||||  |||||||||||| ||||||||| | ||| ||||||    
T  4977846 atttaggataaaagtgaattacaacgacttgaatgataaaaatacaaaaaattcttcaaaccaatgacaactcctttaattgactt 4977931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 188 - 381
Target Start/End: Original strand, 9801759 - 9801952
Alignment:
Q  188 tcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatga 287  Q
    ||||||| |||| |||| ||| ||||| ||||||||||||| ||||| |||||||||| | ||| |||||| |||||||||| |||   |||||||||||    
T  9801759 tcactttgtattttctttaaaaaccttttaagaaccattga-cttcaatcttcatatccttgatccttcacatgatgttttgatttgtcgatttacatga 9801857  T
Q  288 tttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgtt 381  Q
    ||| ||| |        |||||||||| ||||   || ||| || ||||||||||||||||||||| |||| || |||||| ||||||| |||||    
T  9801858 tttatcactattaaaaactcaaaacacctatggaattgcataatctaggataaaagtgaattacaacgactagagtgaaaaaaatacaatatgtt 9801952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 7361654 - 7361737
Alignment:
Q  325 catgatttag-gataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||| ||||||| |||| || ||||| ||||||||| |||||    
T  7361654 catgatttagtgataaaagtgagttacaatgactcgaatgaaaacattacaaaaagttcatcgaaccaatgacaactcctctaa 7361737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 20470832 - 20470914
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    ||||||||||| | |||||||||||||| ||||  | ||||||||||| || |||||| |||||||||||||||||| |||||    
T  20470832 catgatttaggctgaaagtgaattacaacgacttaagtgaaaacaatataatatgttcctcaaaccattgacaactcctctaa 20470914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 401
Target Start/End: Complemental strand, 4828884 - 4828808
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    ||||||||||||||||||| |||||||| || |||| | |||| ||||||||| |||| |||||||||||| |||||    
T  4828884 catgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 4828808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 431
Target Start/End: Complemental strand, 9755883 - 9755787
Alignment:
Q  335 gataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||||||| |||||||| ||||||| |||||| ||||||||| |||| |||||| | |||||| || ||||| |||||| | || |||||||||||    
T  9755883 gataaaagtaaattacaacgactcgagtgaaaaaaatacaaaacgttcctcaaactagtgacaattcctctaattgacttataatttgccttcaaat 9755787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 381
Target Start/End: Original strand, 9761313 - 9761493
Alignment:
Q  201 tcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctca-ttnnn 299  Q
    |||| ||| ||||| ||||||||||||| ||||| |||||||||| | ||| ||||||||||||| ||| |||   |||||||||||||| ||| |        
T  9761313 tctttaaaaaccttttaagaaccattga-cttcaatcttcatatccttgatccttcacgtgatgtcttgatttgtcgatttacatgatttatcactatta 9761411  T
Q  300 nnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgtt 381  Q
        |||||||||| ||||   || ||| || ||||||||||||||||||||| |||| || |||||| ||||||| |||||    
T  9761412 aaaactcaaaacacctatggaattgcataatctaggataaaagtgaattacaacgactagagtgaaaaaaatacaatatgtt 9761493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 315278 - 315196
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||| |||||||||| ||||| ||||  |||||| ||| || ||||||| || |||||||||||||||||||||| |||||    
T  315278 catgatctaggataaaactgaataacaataactcgagtgacaataatacaatatattcttcaaaccattgacaactcctctaa 315196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 419
Target Start/End: Original strand, 2353280 - 2353357
Alignment:
Q  342 gtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttat 419  Q
    ||||||||||| | |||||||||| ||||||||||||||||  |||| |||  ||||||| |||||||||| ||||||    
T  2353280 gtgaattacaacgtctcgaatgaatacaatacaaaatgttccccaaagcatgtacaactcctctaaatgacctcttat 2353357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 7494928 - 7494824
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacat 285  Q
    ||||||||| |||||||||||  |||||||||||||||||| | ||||| |||||||||| | ||| ||||| ||||||| ||| |||    ||||||||    
T  7494928 cttcactttgtattgtcttcatggaccttctaagaaccatt-aacttcaatcttcatatccttgatccttcatgtgatgtcttgatttttcaatttacat 7494830  T
Q  286 gatttc 291  Q
    ||||||    
T  7494829 gatttc 7494824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 431
Target Start/End: Complemental strand, 21472026 - 21471784
Alignment:
Q  188 tcactttatattgtcttcaaagaccttctaagaaccattgatcttcagt-cttcatatcttcgattcttcacgtgatgttttgttttactgatttacatg 286  Q
    ||||||| |||| |||||||  |||||||||||||| || ||||||| | ||||||  | | ||| | |||||||||||  || |||| |||||||||||    
T  21472026 tcactttgtattttcttcaataaccttctaagaaccctttatcttcaattcttcat--ccttgatccctcacgtgatgtcatgatttattgatttacatg 21471929  T
Q  287 atttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttc 385  Q
    ||| |||| |        |||||||||| ||||   || |||||| ||||||||||   ||||||||| |||||| ||||||||||| || ||||||||     
T  21471928 attcctcactacaaaacactcaaaacacctatggaattgcatgatctaggataaaacaaaattacaaa-actcgagtgaaaacaatataatatgttctta 21471830  T
Q  386 aaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||| ||||||||| || |||||||  | |||||| || ||||||||    
T  21471829 aaatcattgacaaatcctctaaatatcatcttatttgtcttcaaat 21471784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 20017202 - 20017143
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattga 228  Q
    ||||||||| || ||| ||||||||| ||||||||||||  |||||||||||||||||||    
T  20017202 aacttgaaatgaattttcttcactttgtattgtcttcaagaaccttctaagaaccattga 20017143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 398
Target Start/End: Complemental strand, 7815437 - 7815343
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaa 398  Q
    |||||||||| |||||  || |||||||||| |||||| ||||||||||  || ||| |||||| ||||||| |||||  | |||||||||||||    
T  7815437 ctcaaaacacctatgaagttgcatgatttagaataaaactgaattacaaccacccgagtgaaaaaaatacaatatgtttcttaaaccattgacaa 7815343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 416
Target Start/End: Complemental strand, 8606140 - 8606071
Alignment:
Q  347 ttacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttct 416  Q
    |||||| |||||||||||||||||| | ||| |||| |||||||||||| ||||| ||||| ||| ||||    
T  8606140 ttacaacgactcgaatgaaaacaatgccaaaagttcctcaaaccattgaaaactcctctaattgatttct 8606071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 14649718 - 14649669
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatc 245  Q
    ||||||||||||| ||||||||| ||||||||||||||| | ||||||||    
T  14649718 tattgtcttcaaaaaccttctaataaccattgatcttcattattcatatc 14649669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 20446451 - 20446386
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttca 234  Q
    ||||| ||| ||||||  |||||||| ||||||||||||  |||||||||||||| ||||||||||    
T  20446451 aacttaaaatgattttttttcactttgtattgtcttcaacaaccttctaagaacccttgatcttca 20446386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 2351072 - 2351008
Alignment:
Q  343 tgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    ||||||||||  ||| |||||||||||||||||||||||  |||||||||  ||||||| |||||    
T  2351072 tgaattacaataactggaatgaaaacaatacaaaatgtttctcaaaccatgaacaactcctctaa 2351008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 9066223 - 9066150
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaact 400  Q
    |||||| | |||||||||||||||||   ||||||| |||||||||||||| |||||| | ||| |||||||||||    
T  9066223 catgatcttggataaaagtgaattacc--gactcgagtgaaaacaatacaatatgttcctaaaaacattgacaact 9066150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 10253783 - 10253815
Alignment:
Q  346 attacaaagactcgaatgaaaacaatacaaaat 378  Q
    |||||||||||||||||||||||||||||||||    
T  10253783 attacaaagactcgaatgaaaacaatacaaaat 10253815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 10670440 - 10670515
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatc 245  Q
    ||||||||| ||||||  |||||||| |||||||||  || ||||||||||||||||||| ||||  ||||||||||    
T  10670440 aacttgaaatgatttttattcactttgtattgtcttagaaaaccttctaagaaccattga-cttcgatcttcatatc 10670515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 375
Target Start/End: Complemental strand, 10292986 - 10292797
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaaccattgatcttcag-tcttcatatcttcgattcttcacgtgatgttttgttttactgatttaca 284  Q
    |||| |||| |||||| |||||| |||||||||||||| ||||||||||| |||||  ||| |  || |||||| |||||| ||| |||  |||||||||    
T  10292986 cttccctttttattgtattcaaacaccttctaagaacccttgatcttcagttcttc--atcctttatccttcacatgatgtcttgatttgatgatttaca 10292889  T
Q  285 tgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaa 375  Q
    ||||| |||| |         || |||||| |||| | || |||||| | |||||||| |||||||||| ||||||| |||||| |||||||    
T  10292888 tgattcctcactacaaaatagtctaaacacctatggtgttgcatgatcttggataaaactgaattacaacgactcgattgaaaaaaatacaa 10292797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 20470675 - 20470740
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttca 234  Q
    |||||||||  | ||| ||||| ||| ||||||||||||  ||||||||||||||||||| |||||    
T  20470675 aacttgaaatcaattttcttcattttgtattgtcttcaagaaccttctaagaaccattgaacttca 20470740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 9070620 - 9070584
Alignment:
Q  186 cttcactttatattgtcttcaaagaccttctaagaac 222  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  9070620 cttcactttatattgtcttaaaaaaccttctaagaac 9070584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 210 - 401
Target Start/End: Complemental strand, 19541245 - 19541054
Alignment:
Q  210 accttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaa 309  Q
    ||||| |||||||||||| |||||| |||||||||| ||||| |||||| |||||| || |||| | |||||||||||||||||| |       ||||||    
T  19541245 accttataagaaccattggtcttcaatcttcatatcctcgatccttcacttgatgtcttattttgccgatttacatgatttctcactagaaagactcaaa 19541146  T
Q  310 acacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    |||| ||||   || ||||||||||||||||| |||||||||| ||||||| |||||  ||||||||| |||| |||||||||| |||||||    
T  19541145 acacctatggagttgcatgatttaggataaaactgaattacaatgactcgattgaaataaatacaaaaagttcctcaaaccattaacaactc 19541054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 151 - 400
Target Start/End: Original strand, 18236150 - 18236399
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    |||||| ||||| |||  ||||||||| || ||| |||||  || ||||||||||||  ||||||||||||||||||  ||||| ||||||||| |  ||    
T  18236150 cgtctttaaatgcctttgaacttgaaatgaattttcttcatcttgtattgtcttcaacaaccttctaagaaccattggccttcaatcttcatatttgtga 18236249  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    | ||||| ||||||| ||||||| | || ||||||||||||||| |       ||||||| || ||||   || ||||||||| |||||||||||||||     
T  18236250 tccttcatgtgatgtcttgttttgccgagttacatgatttctcactaaaaagactcaaaatacttatggagttgcatgatttaagataaaagtgaattat 18236349  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaact 400  Q
    ||  |||||||||||||||||| ||| ||||  |||||||||||||||||    
T  18236350 aacaactcgaatgaaaacaatataaattgtttctcaaaccattgacaact 18236399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 14921914 - 14922029
Alignment:
Q  179 gattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactga 278  Q
    |||||| ||||||||| |||||||| || | ||||||||||||||||||| ||||| |||||||||| |||||||||||| |||||| ||||||| | ||    
T  14921914 gatttttcttcactttgtattgtctacatataccttctaagaaccattgaacttcaatcttcatatcctcgattcttcacatgatgtattgtttttccga 14922013  T
Q  279 tttacatgatttctca 294  Q
    ||||||||||||||||    
T  14922014 tttacatgatttctca 14922029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 196 - 411
Target Start/End: Complemental strand, 17152376 - 17152160
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    |||| |||||||| ||||||||||||||||| || |||| |||||||||| | ||| ||||||  ||||| ||||||| | |||||||||||||||| |     
T  17152376 tattatcttcaaaaaccttctaagaaccattcatattcattcttcatatccttgatccttcacacgatgtcttgttttgccgatttacatgatttcttac 17152277  T
Q  296 tnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattg 394  Q
    |        |||||||||| ||     || ||||| ||| ||||||||| |||||||| |||||||||||||| |||||||||| ||| |||||||||||    
T  17152276 taaaaaaaactcaaaacacttacagagttgcatgaattacgataaaagttaattacaacgactcgaatgaaaataatacaaaatattcctcaaaccattg 17152177  T
Q  395 acaactcttctaaatga 411  Q
    ||||||| |||||||||    
T  17152176 acaactcctctaaatga 17152160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 151 - 392
Target Start/End: Complemental strand, 18818969 - 18818723
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttca-----tatc 245  Q
    ||||||| ||||||||| ||||||||  || ||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||     ||||    
T  18818969 cgtcttgcaatgtcttggaacttgaattgaattttcttcactttgtattgtcttcaaagaccttctaagaaccattaatcttcagttttcatatcctatc 18818870  T
Q  246 ttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtga 345  Q
     |  || ||||||||||||  ||||||| | |||||||||||||||||| |       || |||||   ||||   || ||||||||| ||||||| | |    
T  18818869 cttaatccttcacgtgatgccttgttttgccgatttacatgatttctcaataaaaagactgaaaacgtctatggacttgcatgatttatgataaaactaa 18818770  T
Q  346 attacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccat 392  Q
    ||| ||| ||||| ||||||||||||| ||||||||| | |||||||    
T  18818769 atttcaacgactcaaatgaaaacaatataaaatgttccttaaaccat 18818723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 431
Target Start/End: Complemental strand, 24047582 - 24047369
Alignment:
Q  218 agaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatat 317  Q
    ||||||||||||||||| |||||||||| | ||| ||||| | ||||| ||||||| | |||||  | ||||||||| |       | |||||  | |||    
T  24047582 agaaccattgatcttcattcttcatatccttgatccttcatgggatgtcttgttttgccgatttgtaggatttctcactaaaatgacccaaaatgcctat 24047483  T
Q  318 gattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttctt 417  Q
    |   || ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| |  ||||||| || ||||    
T  24047482 ggagttgcataatttaggataaaagtgaattacaatgactcgaatgaaaacaatacaaaatgttccttaaaccattgacaatttctctaaataacctctt 24047383  T
Q  418 atctgccttcaaat 431  Q
    || | |||||||||    
T  24047382 attttccttcaaat 24047369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 427
Target Start/End: Complemental strand, 31262222 - 31261990
Alignment:
Q  193 ttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttct 292  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||| |||||| ||| ||| ||||||| |  ||||| |||| ||||    
T  31262222 ttatattgtcttcaaagacctactaagaaccattaatcttcaatcttcatatcctcga-tcttcatgtggtgtcttgttttgccaatttagatgaattct 31262124  T
Q  293 cattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccat 392  Q
    || |       || ||||||| | |||  || |||| ||| |||||||| |||||||||| | |  ||| ||||| |||||||||||||  | |||||||    
T  31262123 cactaaaaagacttaaaacacctgtgaagttgcatggttt-ggataaaactgaattacaacgtccagaaagaaaataatacaaaatgtttgttaaaccat 31262025  T
Q  393 tgacaactcttctaaatgacttcttatctgccttc 427  Q
    ||||||||| |||||||||| |||| | |||||||    
T  31262024 tgacaactcctctaaatgacatcttgtttgccttc 31261990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 294
Target Start/End: Original strand, 17415011 - 17415153
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| ||||||||  ||||||||| || ||| ||||||||| | ||||||||||| | || ||||||||||||||| |||| ||||||| || ||||    
T  17415011 cgtcttgcaatgtcttagaacttgaaatgaattttcttcactttttgttgtcttcaaataactcctaagaaccattgat-ttcaatcttcatgtcctcga 17415109  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctca 294  Q
    | ||||||||||||| ||||||| | |||||||| |||||||||    
T  17415110 tccttcacgtgatgtcttgttttgccgatttacacgatttctca 17415153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 21843024 - 21843130
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||| | ||||||||| |||||| ||||||| ||  ||||| || |    
T  21843024 catgatttaggataaaagtaaattacaatgactcgaatgaaaacaatacaacatgttcctaaaaccattggcaactcctctaaattacaacttatttgtc 21843123  T
Q  425 ttcaaat 431  Q
    |||||||    
T  21843124 ttcaaat 21843130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 400
Target Start/End: Original strand, 21505031 - 21505236
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    ||||||||||||| ||||||| |||||||||| ||||||  ||||| ||| | |||  |||| ||||||| ||  ||||  ||||||||||||| ||||     
T  21505031 tattgtcttcaaaaaccttctcagaaccattggtcttcaaacttcacatccttgatctttcatgtgatgtcttaatttatcgatttacatgattcctcac 21505130  T
Q  296 tnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattg 394  Q
    |        |||||||||  || ||  || ||||||||||||||||||| ||||| |||||||||| |||||||||||||| ||| || |||||||||||    
T  21505131 tacaaaacactcaaaacatctaagaagttgcatgatttaggataaaagtaaattataaagactcgagtgaaaacaatacaatatgctcctcaaaccattg 21505230  T
Q  395 acaact 400  Q
    ||||||    
T  21505231 acaact 21505236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 21844651 - 21844757
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||| || |||||| | |||||||||||||||| ||||||| ||  ||||| || |    
T  21844651 catgatttaggataagagtaaattacaatgactcgaatgaaaacaatataacatgttcctaaaaccattgacaactcctctaaattacaacttatttgtc 21844750  T
Q  425 ttcaaat 431  Q
    |||||||    
T  21844751 ttcaaat 21844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 32276536 - 32276641
Alignment:
Q  326 atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcct 425  Q
    ||||||||| |||||  | |||||||| ||||||||| |||||||| ||||||||||||||||||||||||| ||| | |||||||| |||||| | |||    
T  32276536 atgatttagaataaacttcaattacaatgactcgaataaaaacaatgcaaaatgttcttcaaaccattgacatctcctttaaatgacctcttattttcct 32276635  T
Q  426 tcaaat 431  Q
    ||||||    
T  32276636 tcaaat 32276641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 431
Target Start/End: Original strand, 21848966 - 21849201
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcat 295  Q
    |||||| ||| || ||||| |||||||||||||| |||| | ||  |||| | ||| ||||| ||||||| ||||| | | ||||||||| ||||||||     
T  21848966 tattgtgttccaaaaccttttaagaaccattgattttcattattattatccttgatccttcatgtgatgtcttgttcttccgatttacattatttctcac 21849065  T
Q  296 tnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattga 395  Q
    |       |||||||  | ||||   || ||||||||| ||||||| |||||||||| ||||| || |||||||||||||||||||| ||||||||||||    
T  21849066 taaaaagactcaaaaatcctatggagttgcatgatttatgataaaactgaattacaatgactcaaa-gaaaacaatacaaaatgttcctcaaaccattga 21849164  T
Q  396 c-aactcttctaaatgacttcttatctgccttcaaat 431  Q
    | ||||| ||| |||| | |||||| |||||| ||||    
T  21849165 caaactcctctgaatggcctcttatttgccttgaaat 21849201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 28278445 - 28278551
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    |||||| ||||||||||||||||||||| ||||| | |||||| ||||||  ||||||||||||||||||| || || ||||| |  |||||||| ||||    
T  28278445 catgatctaggataaaagtgaattacaacgactcaagtgaaaataatacactatgttcttcaaaccattgagaaatcctctaactctcttcttatttgcc 28278544  T
Q  425 ttcaaat 431  Q
    |||||||    
T  28278545 ttcaaat 28278551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 396
Target Start/End: Original strand, 34063696 - 34063938
Alignment:
Q  159 aatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcac 258  Q
    |||| |||| ||||| ||| || ||| ||||||||| |||||||||||||   ||||||| ||||||  |  || | |||||||||| ||||| ||||||    
T  34063696 aatgccttggaacttcaaatgaattttcttcactttgtattgtcttcaaatgtcttctaataaccatcaaaattaaatcttcatatcgtcgatccttcac 34063795  T
Q  259 gtgatgttttgttttactgatttacatgatttctcattnnnnnnn-----ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaa 353  Q
      ||||| ||||||| | ||||||||||| |||||| |            |||||||||| | ||   || ||||||||||||||| ||||||||||||     
T  34063796 acgatgtcttgttttgccgatttacatgaattctcactcaaaaaaaaaaactcaaaacacttgtggagttgcatgatttaggataatagtgaattacaac 34063895  T
Q  354 gactcgaatgaaaacaatacaaaatgttcttcaaaccattgac 396  Q
     ||||||||||||||||||||||| ||||  ||||||||||||    
T  34063896 aactcgaatgaaaacaatacaaaaagttccacaaaccattgac 34063938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 29647577 - 29647673
Alignment:
Q  335 gataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||||||||||||||| ||||| ||||||||||||| |||| |||| ||||| || ||||||||  ||||| |||||||| || |||||||||||    
T  29647577 gataaaagtgaattacaacgactcaaatgaaaacaatataaaaagttcctcaaatcaatgacaactactctaattgacttctaatttgccttcaaat 29647673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 432
Target Start/End: Complemental strand, 18117187 - 18116969
Alignment:
Q  213 ttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaaca 312  Q
    |||||||||||||| ||||||| | |||||||| ||||| ||||||| ||| | ||||||| | |||||||||||||| |  ||        ||||||||    
T  18117187 ttctaagaaccatttatcttcatttttcatatcctcgatgcttcacgcgatatcttgttttgccgatttacatgattttttgttaaaaagattcaaaaca 18117088  T
Q  313 catatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgac 412  Q
    |  |     || ||| |||| |||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||   ||| || ||||||||||    
T  18117087 ccaacctagttgcattattt-ggattaaagtgaattacaatgactcaaatgaaaacaatacaaaatgttcgtcaaaccatgaccaaatcctctaaatgac 18116989  T
Q  413 ttcttatctgccttcaaata 432  Q
     ||| || || |||||||||    
T  18116988 ctctcatttgtcttcaaata 18116969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 22388775 - 22388880
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    ||||||| ||||||||| || ||||||| ||||| ||||||||||||| |||| |||| |||||  ||||||||||| ||||| |||||||| || ||||    
T  22388775 catgattcaggataaaactggattacaatgactcaaatgaaaacaata-aaaaagttcctcaaattattgacaactcctctaattgacttctaatttgcc 22388873  T
Q  425 ttcaaat 431  Q
    |||||||    
T  22388874 ttcaaat 22388880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 294
Target Start/End: Original strand, 27417123 - 27417253
Alignment:
Q  164 cttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgat 263  Q
    |||| ||||||||| || ||| ||||||||| |||||| |||||| ||||||| |||||||||| ||||||   |||||||| | ||| ||||| |||||    
T  27417123 cttggaacttgaaatgaattttcttcactttgtattgttttcaaaaaccttcttagaaccattggtcttcaacattcatatcattgatccttcatgtgat 27417222  T
Q  264 gttttgttttactgatttacatgatttctca 294  Q
    || ||| |||   ||||||||||||||||||    
T  27417223 gtcttgatttgtcgatttacatgatttctca 27417253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 27918005 - 27918111
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||||||  || |||| |||||||| ||||||||| | ||  ||| |||| || ||||    
T  27918005 catgatttagtataaaagtgaattacaacgactcaaatgaaaacaatacccaacgttcctcaaaccaatgacaactcctatagttgaattctaatttgcc 27918104  T
Q  425 ttcaaat 431  Q
    |||||||    
T  27918105 ttcaaat 27918111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 406
Target Start/End: Complemental strand, 35031816 - 35031714
Alignment:
Q  304 ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactctt 403  Q
    |||||||||| ||||   || |||||| |||||||||||| | |||||| ||||||| |||||||||||||| |||||| |||||||||| ||||||| |    
T  35031816 ctcaaaacacctatggaattgcatgatctaggataaaagtaagttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattaacaactcct 35031717  T
Q  404 cta 406  Q
    |||    
T  35031716 cta 35031714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 329 - 430
Target Start/End: Original strand, 17415221 - 17415322
Alignment:
Q  329 atttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttca 428  Q
    ||||| ||||||| | ||||||||  | |||||||||||||||||||||  ||| |||| ||||||||||||| |||||||||||||| || | ||||||    
T  17415221 atttacgataaaactaaattacaatcaatcgaatgaaaacaatacaaaaatttcctcaacccattgacaactcctctaaatgacttctaattttccttca 17415320  T
Q  429 aa 430  Q
    ||    
T  17415321 aa 17415322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 326 - 407
Target Start/End: Complemental strand, 30998863 - 30998782
Alignment:
Q  326 atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    ||||| |||||||||| |||| ||||| ||||| | |||||||||||||| |||||| |||||||||||||||||| |||||    
T  30998863 atgatctaggataaaactgaagtacaacgactcaagtgaaaacaatacaatatgttcctcaaaccattgacaactcatctaa 30998782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 429
Target Start/End: Complemental strand, 39730669 - 39730436
Alignment:
Q  196 tattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatct-tcgattcttcacgtgatgttttgttttactgatttacatgatttctca 294  Q
    |||||||||||||   ||||||||||  |||  |||||| ||||||||||  | ||| ||||| ||||||| ||||||| |||||||| |||||||||||    
T  39730669 tattgtcttcaaaattcttctaagaaatattagtcttca-tcttcatatcccttgatccttcatgtgatgtcttgttttgctgatttatatgatttctca 39730571  T
Q  295 ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattg 394  Q
     |       |||||||||| |      || |||||||||||||||||||||||||||| |||| |||| ||||| ||| ||||||||| | ||||||       
T  39730570 ctaaaaatactcaaaacacctgcagagttgcatgatttaggataaaagtgaattacaacgacttgaataaaaactatagaaaatgttccttaaaccacaa 39730471  T
Q  395 acaactcttctaaatgacttcttatctgccttcaa 429  Q
    ||||||| ||||||||||  ||||| || ||||||    
T  39730470 acaactcatctaaatgaccccttatttgtcttcaa 39730436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 12363327 - 12363245
Alignment:
Q  326 atgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaat 409  Q
    |||||||| ||||||| ||| |||||| ||||||||||||||||||   ||||||| ||||||||||||| |||||||||||||    
T  12363327 atgatttatgataaaattgatttacaacgactcgaatgaaaacaat-tgaaatgtttttcaaaccattgataactcttctaaat 12363245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 216 - 430
Target Start/End: Original strand, 15454451 - 15454657
Alignment:
Q  216 taagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacat 315  Q
    ||||||||||| ||||| | |||||||||| | ||| ||||| ||||||| ||||||| || ||||||| ||||||||| |       |||||||||| |    
T  15454451 taagaaccatttatctttattcttcatatccttgatccttcatgtgatgtcttgttttgctaatttacacgatttctcactaaaaaaactcaaaacacct 15454550  T
Q  316 atgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttc 415  Q
           | ||||||||||||||||| ||||| |||| ||||| || ||||||||||||||||| || | ||| ||| |||||||| | |||||||| |     
T  15454551 -------tgcatgatttaggataaaaatgaat-acaacgactcaaaagaaaacaatacaaaatgatccttaaagcatagacaactcctttaaatgaccta 15454642  T
Q  416 ttatctgccttcaaa 430  Q
    |||| || |||||||    
T  15454643 ttatttgtcttcaaa 15454657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 31274216 - 31274131
Alignment:
Q  158 aaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcata 243  Q
    |||||||  |||||||| || || ||| |||||  |||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  31274216 aaatgtcaggaaacttggaatgaattttcttcaacttatattgtcttcaaagaccttctaagaaccattaatcttcaattttcata 31274131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 24188055 - 24187987
Alignment:
Q  329 atttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgaca 397  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||| |||| | |||||| |||||    
T  24188055 atttaggataaaagtgaatcacaatgactcgaatgaatacaatacaaaaagttccttaaaccaatgaca 24187987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 401
Target Start/End: Original strand, 16593616 - 16593850
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagt-cttcatatcttcgattcttcacgtgatgttt 267  Q
    ||||||||| || ||| ||||||||| ||||||||||||  |||||||||||||| |||||||||| | ||||||  | | ||| |||||  |||||| |    
T  16593616 aacttgaaatgaattttcttcactttgtattgtcttcaacaaccttctaagaacccttgatcttcatttcttcat--cgttgatccttcaaatgatgtct 16593713  T
Q  268 tgttttactgatttacatgatttctcattnnnnnnn-ctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaa 366  Q
    || |||  ||||||||||||||  ||| |        |||| ||||| ||||   || |||||| |||||||||| ||||||| ||  |||||| |||||    
T  16593714 tgatttgatgatttacatgattcttcactacaaaacactcagaacacctatggagttgcatgatctaggataaaactgaattaaaacaactcgagtgaaa 16593813  T
Q  367 acaatacaaaa--tgttcttcaaaccattgacaactc 401  Q
    |||||| || |  ||||| ||||||||||||||||||    
T  16593814 acaatataatatgtgttcatcaaaccattgacaactc 16593850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 17240876 - 17240964
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgactt 414  Q
    |||||||||| |||||| | |||||| | ||||||||||||||||||| |||| | || |||||| ||||||||||  ||||||||||||    
T  17240876 catgatttagaataaaactaaattacgacgactcgaatgaaaacaatagaaaaag-tcctcaaactattgacaacttatctaaatgactt 17240964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 25474282 - 25474162
Alignment:
Q  173 tgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttt 272  Q
    ||||| || ||| ||||||||||||||||||||||  |||||||||||||| |||| ||||| | |  | ||| | |||||||||| |||||| ||| ||    
T  25474282 tgaaatgaattttcttcactttatattgtcttcaacaaccttctaagaacccttgaccttcaat-tctacatccttgattcttcacatgatgtcttgatt 25474184  T
Q  273 tactgatttacatgatttctca 294  Q
    |  |||||||||||||| ||||    
T  25474183 tgatgatttacatgattcctca 25474162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 22525680 - 22525744
Alignment:
Q  164 cttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattga 228  Q
    ||||||||||||||  | ||| ||||||||| | ||||||||||| |||||||||||||||||||    
T  22525680 cttgaaacttgaaataaattttcttcactttgtgttgtcttcaaataccttctaagaaccattga 22525744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 1733186 - 1733111
Alignment:
Q  332 taggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    |||||||||| |||||||||| ||||| ||||||||||||||||  ||||  ||||  |||||||||||| |||||    
T  1733186 taggataaaactgaattacaacgactcaaatgaaaacaatacaatttgtttctcaactcattgacaactcctctaa 1733111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 22511208 - 22511070
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||||||||||||||||||| ||     ||| ||||| ||  ||||||||||||| ||| |||| ||| |||||| | ||| |||||||||| || |    
T  22511208 cgtcttgaaatgtcttgaaacttaaa-----ttttcttcatttcgtattgtcttcaaaaaccatctatgaatcattgaacatcaatcttcatatcctcaa 22511114  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctca 294  Q
    |  ||||| |||||| ||| |||   ||||||||||||||||||    
T  22511113 tctttcacttgatgtcttgatttttcgatttacatgatttctca 22511070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 30999020 - 30998955
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttca 234  Q
    ||||||||| || ||| || |||||| ||||||||||||  |||||||||||||| ||||||||||    
T  30999020 aacttgaaatgaattttctccactttgtattgtcttcaacaaccttctaagaacccttgatcttca 30998955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 407
Target Start/End: Complemental strand, 15829242 - 15829145
Alignment:
Q  306 caaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttct 405  Q
    |||||||||||||   || |||||||||||||||||||    ||||| ||||  | ||||||||||||||   |||| |||||||||||||||||| |||    
T  15829242 caaaacacatatggagttgcatgatttaggataaaagt----tacaacgacttaagtgaaaacaatacaatgcgttcctcaaaccattgacaactcctct 15829147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 22525736 - 22525780
Alignment:
Q  387 aaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    ||||||||||||||| |||||||||||||| || |||||||||||    
T  22525736 aaccattgacaactcctctaaatgacttctaatttgccttcaaat 22525780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 400
Target Start/End: Complemental strand, 35707889 - 35707821
Alignment:
Q  332 taggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaact 400  Q
    |||||||||| ||||||||||  | || | |||||||||||||| |||||  |||||||||||||||||    
T  35707889 taggataaaactgaattacaacaaatcaagtgaaaacaatacaacatgtttctcaaaccattgacaact 35707821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 1732782 - 1732677
Alignment:
Q  187 ttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatg 286  Q
    |||| ||| ||||| ||||||| |  ||||||||| |||||||||||| |||||||||  |  || ||||| ||||||| |||||||    |||||||||    
T  1732782 ttcattttgtattgccttcaaatatattctaagaatcattgatcttcaatcttcatattcttaatccttcatgtgatgtcttgttttgtcaatttacatg 1732683  T
Q  287 atttct 292  Q
    ||||||    
T  1732682 atttct 1732677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 377
Target Start/End: Complemental strand, 22511035 - 22510987
Alignment:
Q  329 atttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaa 377  Q
    |||||||||||| || |||||||  |||||||||||||| |||||||||    
T  22511035 atttaggataaacgtaaattacagcgactcgaatgaaaaaaatacaaaa 22510987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 31450021 - 31449961
Alignment:
Q  354 gactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgactt 414  Q
    ||||| |||||||| |||||||||| ||| | |||||||  ||||||| ||||||||||||    
T  31450021 gactctaatgaaaaaaatacaaaatattcctaaaaccatctacaactcctctaaatgactt 31449961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 170 - 431
Target Start/End: Original strand, 11564 - 11825
Alignment:
Q  170 acttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttg 269  Q
    |||||||| || ||| ||||||||| ||||||||||||| ||||| |||||| ||||||| |||| |||||| ||  || || ||| || |||||| |||    
T  11564 acttgaaatgaattttcttcactttgtattgtcttcaaataccttataagaatcattgatattcaatcttcaaattctcaatccttaacttgatgtcttg 11663  T
Q  270 ttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaaca 369  Q
    ||||   |||||||||||||||  |         ||||||||||  |||   || |||||||||||| |||| |||||||||| || || |||||||||     
T  11664 ttttgtcgatttacatgatttcgtacggaaaagactcaaaacacccatgtagttgcatgatttaggacaaaactgaattacaacgattcaaatgaaaact 11763  T
Q  370 atacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||||| |||| ||||| |||||||||||| ||||||||||||||  | |||||||||||    
T  11764 atacaaaaagttcatcaaatcattgacaactcctctaaatgacttctattttgccttcaaat 11825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 151 - 415
Target Start/End: Original strand, 228034 - 228296
Alignment:
Q  151 cgtcttgaaatgtcttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcga 250  Q
    ||||||| ||||||||| ||||||||| || ||| ||||||||| ||||||||||||| |||||||||||||||||| |||||| | ||||||   ||||    
T  228034 cgtcttgcaatgtcttggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagaaccattg-tcttcaatattcatacactcga 228132  T
Q  251 ttcttcacgtgatgttttgttttactgatttacatgatttctcattnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattac 350  Q
    | ||||||||||||| ||| |||   |||||||||||||||||| |        | | ||||| | |    || ||||||||| ||||||| ||||||||    
T  228133 tccttcacgtgatgtcttgatttgtcgatttacatgatttctcactataaaacat-acaacacttttagggttgcatgatttatgataaaaatgaattac 228231  T
Q  351 aaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttc 415  Q
    || ||||||||||||||||||  |||||||||  |||| || ||| ||||| ||||| |||||||    
T  228232 aacgactcgaatgaaaacaatttaaaatgttccacaaatcaatgaaaactcctctaattgacttc 228296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 390
Target Start/End: Complemental strand, 21648 - 21425
Alignment:
Q  168 aaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttt 267  Q
    |||||||||| || | | ||| ||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||||| | ||| ||||| || |||| |    
T  21648 aaacttgaaatgaatattcttaactttgtattgtctttaaaaaccttctaagaaccattgatcttcaatcttcatatcattgatccttcatgtaatgtct 21549  T
Q  268 tgttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaa 366  Q
    || |||   ||||||||||||| |||| |        | |||||||  |||||  || |||||||||||||||||||||||||||| ||||||| |||||    
T  21548 tggtttgtcgatttacatgattcctcactgcaaaacacccaaaacaattatgaagttgcatgatttaggataaaagtgaattacaacgactcgagtgaaa 21449  T
Q  367 acaatacaaaatgttcttcaaacc 390  Q
    ||||||||| | |||| |||||||    
T  21448 acaatacaataagttcctcaaacc 21425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 290
Target Start/End: Complemental strand, 6444 - 6324
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||  |||||| ||||||||| |||| |||||||| | |||||| ||||||||| |||||| | |||||||| | ||| ||||||||||||| ||    
T  6444 aacttgaattgatttttcttcactttgtattttcttcaaaaatcttctaggaaccattggtcttcaat-ttcatatccttgatccttcacgtgatgtctt 6346  T
Q  269 gttttactgatttacatgattt 290  Q
    | |||   ||||||||||||||    
T  6345 gatttgtcgatttacatgattt 6324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 401
Target Start/End: Complemental strand, 6282 - 6213
Alignment:
Q  332 taggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactc 401  Q
    |||||||||||| |||||||| |||| || |||||| ||||||  |||||| |||||||||||| |||||    
T  6282 taggataaaagtaaattacaatgacttgagtgaaaataatacattatgttcctcaaaccattgaaaactc 6213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 58838 - 58732
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgcc 424  Q
    ||||||| ||||||||  || ||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||| ||| | |||||||| || ||||    
T  58838 catgattcaggataaacctggattacaatgacccgaatgaaaacaatacaaaaagttcctcaaaccattgacaactcctctgattgacttctaatttgcc 58739  T
Q  425 ttcaaat 431  Q
    |||||||    
T  58738 ttcaaat 58732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 403
Target Start/End: Original strand, 26820 - 27054
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    |||||||||||| ||| ||||||||| ||||||||||||  || |||||||||||||||| ||||| | |||||||| | |||  |||||||||||| ||    
T  26820 aacttgaaacgaattttcttcactttgtattgtcttcaagaactttctaagaaccattgaacttcaattttcatatccttgatctttcacgtgatgtctt 26919  T
Q  269 gttttactgatttacatgatttctca-ttnnnnnnnctcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaatgaaaa 367  Q
      |||   |||||||||||||||||| |        |||||||||| ||||   ||  |||||||||||||||||| |||||||| |||| ||  |||||    
T  26920 aatttgtcgatttacatgatttctcactactaaacactcaaaacacctatgtagttgtatgatttaggataaaagtaaattacaatgacttgagcgaaaa 27019  T
Q  368 caatacaaaatgttcttcaaaccattgacaactctt 403  Q
    | ||||||  || || |||| |||| ||||||||||    
T  27020 c-atacaatttgctcctcaatccatagacaactctt 27054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 325 - 419
Target Start/End: Complemental strand, 1536 - 1442
Alignment:
Q  325 catgatttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttat 419  Q
    ||||||| | ||||||||||||||| || || ||||||||||||||||||||||| || |||||  ||||||||||| |||||||||| ||||||    
T  1536 catgattaatgataaaagtgaattaaaatgaatcgaatgaaaacaatacaaaatgctcctcaaaatattgacaactcctctaaatgacctcttat 1442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 275
Target Start/End: Original strand, 22479 - 22584
Alignment:
Q  169 aacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgtttt 268  Q
    ||||||||| || ||| |||||| || ||||||||| ||| |||||||| |||||||||| ||||| |||||||||| | ||||||||||||||||| ||    
T  22479 aacttgaaatgaattttcttcaccttgtattgtcttaaaaaaccttctatgaaccattga-cttcattcttcatatccttgattcttcacgtgatgtctt 22577  T
Q  269 gttttac 275  Q
    | |||||    
T  22578 gatttac 22584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 431
Target Start/End: Complemental strand, 1864 - 1772
Alignment:
Q  339 aaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||||||||||| | |||||| ||||||||||||||| ||||||||||||| |||||| || | ||| |||||||| || | |||||||||    
T  1864 aaagtgaattacaacggctcgaacgaaaacaatacaaaaggttcttcaaaccaatgacaaatcctataattgacttctaatattccttcaaat 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 5634 - 5759
Alignment:
Q  168 aaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttt 267  Q
    |||||||||  || ||| ||||||||| |||| |||| |||||||||||||||||||||||  |||| |||||||||| ||||| ||||| ||||||| |    
T  5634 aaacttgaattgaattttcttcactttgtattttctttaaagaccttctaagaaccattga-attcaatcttcatatcctcgatccttcatgtgatgtct 5732  T
Q  268 tgttttactgatttacatgatttctca 294  Q
    |  |||    |||||||||||||||||    
T  5733 ttatttgtcaatttacatgatttctca 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 294
Target Start/End: Complemental strand, 2062 - 1933
Alignment:
Q  164 cttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgat 263  Q
    |||| |||||||||  | ||| ||||||||| |||| |||||| | | ||||||| |||||||| |||||| |||||||||| || || |||||||||||    
T  2062 cttggaacttgaaataaattttcttcactttgtattttcttcataaaacttctaacaaccattg-tcttcaatcttcatatcgtcaatccttcacgtgat 1964  T
Q  264 gttttgttttactgatttacatgatttctca 294  Q
    || ||| |||  ||||||||| |||||||||    
T  1963 gtcttgatttgttgatttacaggatttctca 1933  T

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Target: scaffold0337; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 431
Target Start/End: Complemental strand, 1742 - 1653
Alignment:
Q  342 gtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||||| || ||| |||||||||||||||||||| |||| |||||| |||||||| || |||||  ||||||| || | |||||||||    
T  1742 gtgaattaaaacgacacgaatgaaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaat 1653  T

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Target: scaffold0065 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 294
Target Start/End: Complemental strand, 12498 - 12369
Alignment:
Q  164 cttgaaacttgaaacgattttccttcactttatattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgat 263  Q
    |||| |||||||||  | ||| ||||||||| |||| |||||| | | ||||||| |||||||| |||||  |||||||||| || || |||||||||||    
T  12498 cttggaacttgaaataaattttcttcactttgtattttcttcataaaacttctaacaaccattg-tcttcgatcttcatatcgtcaatccttcacgtgat 12400  T
Q  264 gttttgttttactgatttacatgatttctca 294  Q
    || ||| |||   ||||||||||||||||||    
T  12399 gtcttgatttgtcgatttacatgatttctca 12369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 431
Target Start/End: Complemental strand, 12178 - 12089
Alignment:
Q  342 gtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaaatgacttcttatctgccttcaaat 431  Q
    |||||||| || ||| |||||||||||||||||||| |||| |||||| |||||||| || |||||  ||||||| || | |||||||||    
T  12178 gtgaattaaaacgacacgaatgaaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaat 12089  T

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Target: scaffold1026 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 1859 - 1937
Alignment:
Q  329 atttaggataaaagtgaattacaaagactcgaatgaaaacaatacaaaatgttcttcaaaccattgacaactcttctaa 407  Q
    ||||||||||||| |  ||||||| |||| |||||||||||||||||||  ||| | ||| |||||||||||| |||||    
T  1859 atttaggataaaactagattacaatgactagaatgaaaacaatacaaaaatttccttaaatcattgacaactcatctaa 1937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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