View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7242_high_3 (Length: 348)
Name: NF7242_high_3
Description: NF7242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7242_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 10230624 - 10230960
Alignment:
| Q |
1 |
gtgatgagcttcgcggacactcaaaagcctctgaggatcacaagtggttgatggttgcttctaagttagctgaacagagatcaaaggctgagcgcttcaa |
100 |
Q |
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| T |
10230624 |
gtgatgagcttcgcggacactcaaaagcctctgaggatcacaagtggttgatggttgcttctaagttagctgaacagagatcaaaggctgagcgcttcaa |
10230723 |
T |
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| Q |
101 |
caaccttgatctttcaaagggtcctctcgaaacaaggccaagggataaatttgggttccaggaggagaacaaatttgacactcttaacttgagcatgtta |
200 |
Q |
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| T |
10230724 |
caaccttgatctttcaaagggtcctctcgaaacaaggccaagggataaatttgggttccaggaggagaacaaattcgacactcttaacttgagcatgtta |
10230823 |
T |
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| Q |
201 |
aacctggactctaaatttactgagaatatgagcaaaaactcgcttcggaacggtgtttacaatatgaatgctgtgtaccagaaaagcaatgtaaactttg |
300 |
Q |
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|||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10230824 |
aacctggactctaaatttaccgagaatatgagcaaaagctcgcttcggaacggtgtttacaatatgaatgctgtgtaccagaaaagcaatgtaaactttg |
10230923 |
T |
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| Q |
301 |
cgggtaacatgaatagtaacaagtatagcggtgatgt |
337 |
Q |
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|||||||||||||||||||||||||||||||| |||| |
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| T |
10230924 |
cgggtaacatgaatagtaacaagtatagcggtaatgt |
10230960 |
T |
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