View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7243_high_9 (Length: 302)
Name: NF7243_high_9
Description: NF7243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7243_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 34435870 - 34436165
Alignment:
| Q |
1 |
aatagtttaatgcatatgaacaaatgttttaaatcagtcgcactgcaattgcgaaatattgtggtcgaatagaattgatgtaactgtaattgcgattttc |
100 |
Q |
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| T |
34435870 |
aatagtttaatgcatatgaacaaatgttttaaatcagtcgcactgcaattgcgaaatattgtggtcgaatagaattgatgtaactgtaattgcgattttc |
34435969 |
T |
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| Q |
101 |
atacggttgttgagagataaaaaatcttgacgttgcaactatagccgtggttacaaaaccgttttacagaaccttgatttgaagctatgattatttcttg |
200 |
Q |
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| T |
34435970 |
atacggttgttgagagataaaaaatcttgacgttgcaactataaccgcggttacaaaaccgttttacagaaccttgatttgaagctatgattttttcttg |
34436069 |
T |
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| Q |
201 |
gttgaacttaagctctagttagttgtgccaacaattaattgttccaaaaaagagtttcgatttcggaaatggaagtaacttacttgatgtccatct |
296 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
34436070 |
gttgaacataagctctagttagttgtgccaacaattaattgttccaaaaaagagtttcgatttcggaaatggaagtaacttacttgatgcccatct |
34436165 |
T |
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