View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7243_low_10 (Length: 383)
Name: NF7243_low_10
Description: NF7243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7243_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 354217 - 353996
Alignment:
| Q |
19 |
cataacactgctccagcaatgatcacaattatggagtaatagagggaaagaataaagctaattctctactttacagttacataatgtatgaatttcactt |
118 |
Q |
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| T |
354217 |
cataacactgctccagcaatgatcacaattatggagtaatagagggaaagaataaagctaattctctactttacagttacataatgtatgaatttcactt |
354118 |
T |
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| Q |
119 |
gtctccttcccttcaaccttcaacagatcagacataaccaactgcgggtccgagtttctgagtcttttgatcaagcttctttgttatagtggcaaactta |
218 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
354117 |
gtctccttcccttcaaccttcaatagatcagacataaccaactgcgggtccgagtttctgagtcttctgatcaagcttctttgttatagtggcaaactta |
354018 |
T |
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| Q |
219 |
accttcaaaaacaaacatcaca |
240 |
Q |
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|||||||||||||||||||||| |
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| T |
354017 |
accttcaaaaacaaacatcaca |
353996 |
T |
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