View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7245_low_9 (Length: 246)
Name: NF7245_low_9
Description: NF7245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7245_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 10024225 - 10024019
Alignment:
| Q |
16 |
aatataacacaaaaaacaaggtagagatgagttcggtttaataaaaaccctaagccaataataattataatgttgaaatttgaggcctaattaaggtgag |
115 |
Q |
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| T |
10024225 |
aatataacacaaaaaa-aaggtaaagatgagttcggtttaataaaaaccctaagccaataataattataatgttgaaatttgaggcctaa----ggtgag |
10024131 |
T |
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| Q |
116 |
aacttaatcaaattcttagacctcaatgagtaggaatgacatcataaacaatttagacatatgttttcagaaactactgacatagcataataagcatcta |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
10024130 |
aacttaatcaaattcttagacctcaatgagtaggaatgacatcataaacaatttagaaatatgttttcagaaactactgacatagcataataagcatcta |
10024031 |
T |
|
| Q |
216 |
caagtatagtat |
227 |
Q |
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|||||||||||| |
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| T |
10024030 |
caagtatagtat |
10024019 |
T |
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