View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7246_high_21 (Length: 307)

Name: NF7246_high_21
Description: NF7246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7246_high_21
NF7246_high_21
[»] chr7 (1 HSPs)
chr7 (1-292)||(36569181-36569472)


Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 36569472 - 36569181
Alignment:
Q  1 tttcacatttttctatctctaaattttcgctgctaaataagtttgtctaatagttnnnnnnncatttcattgaggtatggaaaaaataaggaaaatttgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||    
T  36569472 tttcacatttttctatctctaaattttcgctgctaaataagtttgtctaatagttaaaaaaacatttaattgaggtatggaaaaaagaaggaaaatttgg 36569373  T
Q  101 atggtatattagcgtggttggattggacaatgaagccacaaagaggaacaattttttatttaattatttaaatgatcgatctggaagaaacactgaaaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  36569372 atggtatattagcgtggttggattggacaatgaagccacaaagaggaacaattttttgtttaattattcaaatgatcgatctggaagaaacactgaaaaa 36569273  T
Q  201 atttcagttctaaacaggtgcgaaaatacagaaagaagtagcacagacttcaatgtagtaaaaggcataaggaacattgattgagtagttta 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36569272 atttcagttctaaacaggtgcgaaaatacagaaagaagtagcacagacttcaatgtagtaaaaggcataaggaacattgattgagtagttta 36569181  T

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