View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7249_low_5 (Length: 260)
Name: NF7249_low_5
Description: NF7249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7249_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 26 - 245
Target Start/End: Complemental strand, 37056197 - 37055974
Alignment:
| Q |
26 |
tatggtgttaggcaagtccaacaaaacatgaccccacagcagtccacatttacaattttttgattaaataacttttaactactaaaaagttttatgatcc |
125 |
Q |
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| T |
37056197 |
tatggtgttaggcaagtccaacaaaacatgaccccacagcagtccacatttacaattttttgattaaataacttttaactactaaaaagttttatgatcc |
37056098 |
T |
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| Q |
126 |
a----acatcaaagatcatgtctcaattcccagatactaaaccttttgaatcatcatcaatcaaattataatgctaaaaagcaacaaggtgcatgttggt |
221 |
Q |
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| T |
37056097 |
atccaacatcaaagatcatgtctcaattcccagatactaaaccttttgaatcatcatcaatcaaattataatgctaaaaagcaacaaggtgcatgttggt |
37055998 |
T |
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| Q |
222 |
agagtgttataataacatacttat |
245 |
Q |
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| T |
37055997 |
agagtgttataataatatacttat |
37055974 |
T |
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