View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7250_low_8 (Length: 217)

Name: NF7250_low_8
Description: NF7250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7250_low_8
NF7250_low_8
[»] chr8 (54 HSPs)
chr8 (1-217)||(21399558-21399777)
chr8 (1-217)||(21794051-21794270)
chr8 (1-209)||(18834267-18834474)
chr8 (90-214)||(22610262-22610386)
chr8 (90-213)||(23884101-23884225)
chr8 (1-94)||(1485138-1485232)
chr8 (1-94)||(5852624-5852718)
chr8 (1-94)||(14408776-14408870)
chr8 (105-217)||(18816287-18816401)
chr8 (6-94)||(4541702-4541791)
chr8 (138-213)||(22345145-22345220)
chr8 (138-213)||(22356805-22356880)
chr8 (1-94)||(14824512-14824606)
chr8 (1-94)||(20045527-20045621)
chr8 (1-94)||(23914720-23914814)
chr8 (9-96)||(45289877-45289965)
chr8 (9-94)||(4484024-4484110)
chr8 (105-209)||(21514637-21514743)
chr8 (13-96)||(24485370-24485454)
chr8 (1-94)||(4380954-4381047)
chr8 (1-91)||(18816643-18816734)
chr8 (146-213)||(22208258-22208325)
chr8 (109-210)||(36732411-36732514)
chr8 (13-94)||(18677394-18677476)
chr8 (1-90)||(22258469-22258559)
chr8 (13-96)||(22002503-22002587)
chr8 (105-210)||(4380616-4380723)
chr8 (144-205)||(22483773-22483834)
chr8 (90-213)||(36305936-36306053)
chr8 (146-209)||(22258306-22258369)
chr8 (101-212)||(21676590-21676701)
chr8 (106-210)||(12577826-12577932)
chr8 (97-214)||(21678841-21678958)
chr8 (143-214)||(22483924-22483994)
chr8 (171-214)||(21676495-21676537)
chr8 (14-96)||(22474567-22474650)
chr8 (161-216)||(22532125-22532180)
chr8 (161-216)||(22536810-22536865)
chr8 (144-198)||(18023567-18023621)
chr8 (144-198)||(38184923-38184977)
chr8 (14-98)||(23883758-23883843)
chr8 (139-210)||(17906848-17906919)
chr8 (14-96)||(17978574-17978657)
chr8 (14-96)||(22208079-22208162)
chr8 (90-144)||(36732549-36732604)
chr8 (179-217)||(6101745-6101783)
chr8 (179-213)||(20022036-20022070)
chr8 (179-217)||(23899979-23900017)
chr8 (179-217)||(31722485-31722523)
chr8 (179-217)||(36727030-36727068)
chr8 (179-217)||(45469211-45469249)
chr8 (138-214)||(20397505-20397581)
chr8 (1-96)||(38989251-38989347)
chr8 (1-96)||(39020348-39020444)
[»] chr7 (74 HSPs)
chr7 (1-213)||(58409-58622)
chr7 (1-216)||(15720619-15720838)
chr7 (90-213)||(13744506-13744629)
chr7 (93-216)||(36300634-36300757)
chr7 (90-213)||(8930761-8930887)
chr7 (90-214)||(33556100-33556225)
chr7 (92-213)||(15700731-15700852)
chr7 (90-214)||(18570577-18570704)
chr7 (90-209)||(25943199-25943319)
chr7 (124-213)||(13315078-13315167)
chr7 (1-94)||(15376045-15376139)
chr7 (105-217)||(15575641-15575755)
chr7 (1-94)||(20384455-20384549)
chr7 (6-94)||(457064-457153)
chr7 (101-216)||(47095394-47095511)
chr7 (1-94)||(4691056-4691150)
chr7 (1-94)||(13870082-13870176)
chr7 (1-94)||(16410796-16410890)
chr7 (1-94)||(16580457-16580551)
chr7 (1-94)||(27217598-27217692)
chr7 (105-217)||(18874657-18874770)
chr7 (1-96)||(32126227-32126323)
chr7 (4-94)||(18431452-18431543)
chr7 (109-217)||(708421-708531)
chr7 (1-90)||(14161020-14161110)
chr7 (1-94)||(18628302-18628396)
chr7 (1-94)||(18641008-18641102)
chr7 (109-217)||(20252174-20252284)
chr7 (1-94)||(20484816-20484910)
chr7 (105-210)||(48212726-48212835)
chr7 (109-213)||(19195562-19195667)
chr7 (105-210)||(43745602-43745709)
chr7 (9-94)||(16233266-16233352)
chr7 (9-94)||(16460153-16460239)
chr7 (13-94)||(26355311-26355393)
chr7 (13-94)||(26357763-26357845)
chr7 (9-94)||(45846986-45847072)
chr7 (13-96)||(41523668-41523752)
chr7 (13-96)||(41526130-41526214)
chr7 (1-91)||(15575997-15576088)
chr7 (13-91)||(43745221-43745300)
chr7 (1-94)||(20488177-20488271)
chr7 (147-213)||(38299738-38299804)
chr7 (146-210)||(8488093-8488157)
chr7 (146-210)||(8513752-8513816)
chr7 (13-96)||(14948449-14948533)
chr7 (9-94)||(11392632-11392716)
chr7 (4-94)||(18875009-18875098)
chr7 (144-205)||(15700887-15700948)
chr7 (13-96)||(24702980-24703064)
chr7 (13-96)||(24705427-24705511)
chr7 (156-217)||(3287743-3287804)
chr7 (1-96)||(8513913-8514009)
chr7 (144-212)||(16250219-16250287)
chr7 (156-209)||(43276744-43276797)
chr7 (105-210)||(4690662-4690769)
chr7 (14-96)||(14317883-14317966)
chr7 (14-98)||(8931145-8931230)
chr7 (143-209)||(19283040-19283108)
chr7 (14-96)||(9743237-9743320)
chr7 (139-213)||(12127159-12127233)
chr7 (179-217)||(20586374-20586412)
chr7 (179-217)||(48807317-48807355)
chr7 (1-74)||(3192393-3192466)
chr7 (14-94)||(48213107-48213188)
chr7 (144-198)||(831861-831915)
chr7 (144-198)||(1197041-1197095)
chr7 (14-91)||(13315446-13315524)
chr7 (179-217)||(14218887-14218925)
chr7 (184-214)||(16186930-16186960)
chr7 (139-213)||(20214129-20214203)
chr7 (13-98)||(33556445-33556531)
chr7 (105-133)||(16186859-16186887)
chr7 (138-214)||(24269942-24270018)
[»] chr3 (65 HSPs)
chr3 (1-216)||(14442015-14442234)
chr3 (1-209)||(17684835-17685047)
chr3 (9-209)||(54875474-54875679)
chr3 (1-213)||(6159245-6159461)
chr3 (1-209)||(17669698-17669910)
chr3 (1-217)||(2841498-2841718)
chr3 (14-217)||(6156564-6156770)
chr3 (104-212)||(3527154-3527262)
chr3 (105-210)||(24548953-24549057)
chr3 (101-217)||(14520388-14520506)
chr3 (90-214)||(22841274-22841405)
chr3 (101-197)||(50755266-50755365)
chr3 (1-94)||(6468466-6468560)
chr3 (105-217)||(17208470-17208584)
chr3 (1-94)||(17463914-17464008)
chr3 (105-210)||(24547146-24547253)
chr3 (1-94)||(34160062-34160156)
chr3 (1-94)||(45577773-45577867)
chr3 (1-96)||(13151118-13151214)
chr3 (1-96)||(13153586-13153682)
chr3 (1-94)||(10541619-10541713)
chr3 (1-94)||(15413167-15413261)
chr3 (1-94)||(17208137-17208231)
chr3 (9-94)||(55477236-55477322)
chr3 (1-94)||(14520059-14520153)
chr3 (9-94)||(45606237-45606323)
chr3 (143-214)||(12917301-12917372)
chr3 (1-94)||(14671621-14671716)
chr3 (1-94)||(10247054-10247148)
chr3 (1-96)||(14508644-14508740)
chr3 (146-213)||(14641544-14641611)
chr3 (17-94)||(15978287-15978365)
chr3 (1-96)||(5215444-5215540)
chr3 (13-96)||(7780675-7780759)
chr3 (1-96)||(14152558-14152654)
chr3 (13-96)||(16453605-16453688)
chr3 (13-96)||(28847949-28848033)
chr3 (1-96)||(54330465-54330561)
chr3 (105-213)||(29907584-29907695)
chr3 (105-213)||(29948750-29948861)
chr3 (105-213)||(29997904-29998015)
chr3 (144-214)||(45803326-45803396)
chr3 (146-210)||(14152398-14152462)
chr3 (146-217)||(5215636-5215707)
chr3 (14-98)||(3527533-3527618)
chr3 (97-214)||(3160622-3160740)
chr3 (104-161)||(13522326-13522386)
chr3 (161-217)||(19568200-19568256)
chr3 (100-213)||(50350812-50350929)
chr3 (139-210)||(16050909-16050980)
chr3 (144-198)||(2247877-2247931)
chr3 (179-217)||(13185917-13185955)
chr3 (179-217)||(40808018-40808056)
chr3 (179-217)||(40812855-40812893)
chr3 (179-217)||(44274440-44274478)
chr3 (17-55)||(45471771-45471809)
chr3 (146-213)||(15566733-15566800)
chr3 (14-96)||(53646217-53646300)
chr3 (179-217)||(5200235-5200273)
chr3 (179-217)||(10563730-10563768)
chr3 (171-213)||(25202149-25202190)
chr3 (179-217)||(33565109-33565147)
chr3 (179-217)||(35960920-35960958)
chr3 (97-133)||(12155102-12155138)
chr3 (14-74)||(12917715-12917775)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-217)||(39947-40167)
[»] chr1 (41 HSPs)
chr1 (1-214)||(20588476-20588695)
chr1 (1-214)||(20593014-20593233)
chr1 (90-214)||(34392698-34392825)
chr1 (90-213)||(45499472-45499598)
chr1 (106-213)||(8306552-8306662)
chr1 (1-94)||(13989602-13989696)
chr1 (6-94)||(21474416-21474505)
chr1 (6-96)||(51083019-51083110)
chr1 (1-94)||(14237773-14237867)
chr1 (105-213)||(28476730-28476840)
chr1 (1-96)||(23593060-23593157)
chr1 (1-94)||(24719855-24719949)
chr1 (1-94)||(16362655-16362750)
chr1 (105-213)||(12710813-12710923)
chr1 (127-213)||(35895069-35895155)
chr1 (13-94)||(41373222-41373304)
chr1 (1-96)||(4596004-4596100)
chr1 (13-96)||(21922619-21922703)
chr1 (101-206)||(24719514-24719620)
chr1 (146-217)||(50544861-50544932)
chr1 (121-213)||(38056668-38056762)
chr1 (143-211)||(17901792-17901860)
chr1 (149-212)||(635001-635064)
chr1 (106-210)||(24007224-24007330)
chr1 (146-209)||(22145666-22145729)
chr1 (20-96)||(21841526-21841603)
chr1 (143-211)||(6834162-6834230)
chr1 (175-214)||(7703140-7703179)
chr1 (161-217)||(7051914-7051970)
chr1 (146-210)||(8275988-8276052)
chr1 (161-216)||(24723344-24723399)
chr1 (145-210)||(51336467-51336532)
chr1 (141-209)||(16401897-16401963)
chr1 (138-214)||(21168914-21168990)
chr1 (161-217)||(21239041-21239097)
chr1 (179-217)||(4595845-4595883)
chr1 (179-217)||(13302924-13302962)
chr1 (179-217)||(42913071-42913109)
chr1 (145-210)||(12327742-12327807)
chr1 (97-133)||(21188111-21188147)
chr1 (14-96)||(44892259-44892343)
[»] chr5 (34 HSPs)
chr5 (1-213)||(32607312-32607530)
chr5 (92-213)||(21398640-21398764)
chr5 (1-94)||(18744445-18744539)
chr5 (105-217)||(18744820-18744934)
chr5 (1-94)||(39245872-39245966)
chr5 (109-214)||(16063701-16063808)
chr5 (1-94)||(23199553-23199647)
chr5 (1-94)||(38620172-38620266)
chr5 (1-96)||(29346717-29346813)
chr5 (1-96)||(29349190-29349286)
chr5 (1-96)||(29351663-29351759)
chr5 (1-94)||(39364120-39364214)
chr5 (9-96)||(264098-264186)
chr5 (1-94)||(23065252-23065346)
chr5 (105-209)||(23199207-23199313)
chr5 (105-205)||(1627071-1627174)
chr5 (13-96)||(10732267-10732351)
chr5 (13-96)||(42244692-42244776)
chr5 (105-210)||(660736-660841)
chr5 (138-204)||(31621957-31622023)
chr5 (1-96)||(20909749-20909846)
chr5 (92-156)||(22111911-22111977)
chr5 (109-217)||(6551282-6551392)
chr5 (21-74)||(660287-660340)
chr5 (14-96)||(14025965-14026048)
chr5 (143-214)||(20313263-20313332)
chr5 (179-217)||(20469168-20469206)
chr5 (101-133)||(21504082-21504114)
chr5 (138-213)||(31622098-31622173)
chr5 (179-213)||(21300040-21300074)
chr5 (179-213)||(21617924-21617958)
chr5 (179-216)||(20566568-20566605)
chr5 (14-74)||(21503729-21503789)
chr5 (145-209)||(36508633-36508697)
[»] chr4 (46 HSPs)
chr4 (1-212)||(55583036-55583251)
chr4 (90-216)||(9622419-9622548)
chr4 (124-213)||(10273350-10273439)
chr4 (105-217)||(14631081-14631195)
chr4 (1-94)||(7640518-7640612)
chr4 (1-94)||(15117684-15117778)
chr4 (1-94)||(18238944-18239038)
chr4 (105-213)||(25513797-25513907)
chr4 (1-96)||(3485705-3485801)
chr4 (1-96)||(12033101-12033197)
chr4 (1-96)||(25031001-25031097)
chr4 (4-94)||(44772415-44772506)
chr4 (1-94)||(2424782-2424876)
chr4 (1-94)||(19243439-19243533)
chr4 (9-94)||(1836850-1836936)
chr4 (118-217)||(16296897-16296998)
chr4 (1-96)||(14873415-14873511)
chr4 (1-94)||(18022849-18022944)
chr4 (105-210)||(26446153-26446260)
chr4 (13-96)||(29268104-29268188)
chr4 (13-96)||(44616039-44616123)
chr4 (13-96)||(50221668-50221751)
chr4 (1-66)||(26445681-26445746)
chr4 (13-96)||(14718042-14718126)
chr4 (106-165)||(16296819-16296881)
chr4 (146-213)||(9638999-9639066)
chr4 (146-209)||(12424290-12424355)
chr4 (156-210)||(13847200-13847254)
chr4 (109-203)||(35660906-35661002)
chr4 (146-209)||(33186892-33186955)
chr4 (146-215)||(15239810-15239879)
chr4 (106-210)||(2424386-2424492)
chr4 (161-217)||(19434551-19434607)
chr4 (14-96)||(19566076-19566159)
chr4 (14-96)||(33186713-33186796)
chr4 (14-96)||(44023761-44023844)
chr4 (179-217)||(15115244-15115282)
chr4 (139-217)||(37019652-37019730)
chr4 (14-96)||(12424451-12424534)
chr4 (179-217)||(9924176-9924214)
chr4 (179-217)||(14549782-14549820)
chr4 (144-198)||(17143009-17143063)
chr4 (100-133)||(14477573-14477606)
chr4 (44-96)||(25513583-25513636)
chr4 (100-137)||(45314157-45314194)
chr4 (44-96)||(46741040-46741093)
[»] chr6 (37 HSPs)
chr6 (90-213)||(10446147-10446273)
chr6 (1-94)||(18333924-18334018)
chr6 (1-94)||(19858254-19858348)
chr6 (1-94)||(24423283-24423377)
chr6 (1-94)||(26923777-26923871)
chr6 (1-94)||(33865014-33865108)
chr6 (6-94)||(2290510-2290599)
chr6 (1-94)||(22782964-22783058)
chr6 (4-96)||(21686329-21686422)
chr6 (1-96)||(1540241-1540337)
chr6 (9-94)||(8055775-8055861)
chr6 (13-96)||(12743068-12743152)
chr6 (13-96)||(17882825-17882909)
chr6 (1-96)||(23656137-23656233)
chr6 (1-96)||(17318281-17318377)
chr6 (114-210)||(21683074-21683171)
chr6 (13-96)||(33862545-33862629)
chr6 (143-211)||(29045257-29045325)
chr6 (146-213)||(23658078-23658145)
chr6 (121-213)||(19825482-19825576)
chr6 (90-133)||(1818884-1818927)
chr6 (105-210)||(15998835-15998942)
chr6 (105-209)||(20410512-20410616)
chr6 (146-216)||(18982561-18982631)
chr6 (139-217)||(15890704-15890782)
chr6 (111-213)||(34140452-34140554)
chr6 (32-94)||(2077072-2077135)
chr6 (12-74)||(17856773-17856835)
chr6 (171-213)||(34153068-34153109)
chr6 (14-96)||(18928535-18928618)
chr6 (14-96)||(22557059-22557142)
chr6 (161-216)||(28948579-28948634)
chr6 (14-96)||(31734518-31734601)
chr6 (13-98)||(10445807-10445893)
chr6 (148-213)||(13285739-13285804)
chr6 (100-137)||(25601401-25601438)
chr6 (179-215)||(24267871-24267907)
[»] chr2 (47 HSPs)
chr2 (90-212)||(28344985-28345107)
chr2 (138-213)||(23801477-23801552)
chr2 (106-213)||(149497-149610)
chr2 (1-94)||(18809679-18809773)
chr2 (105-217)||(21335258-21335372)
chr2 (1-94)||(23711345-23711439)
chr2 (1-94)||(26506115-26506209)
chr2 (1-94)||(27920096-27920190)
chr2 (6-94)||(39683057-39683146)
chr2 (111-217)||(21315468-21315576)
chr2 (1-96)||(38968216-38968312)
chr2 (1-94)||(21315823-21315917)
chr2 (1-94)||(21368905-21368999)
chr2 (1-94)||(23131598-23131692)
chr2 (1-94)||(23134065-23134159)
chr2 (1-94)||(26508593-26508687)
chr2 (1-94)||(32038829-32038923)
chr2 (1-96)||(24897525-24897621)
chr2 (1-96)||(24904962-24905058)
chr2 (105-213)||(21369239-21369349)
chr2 (1-94)||(34401854-34401948)
chr2 (1-96)||(572134-572230)
chr2 (1-96)||(24900008-24900104)
chr2 (1-96)||(24902485-24902581)
chr2 (1-96)||(24907437-24907533)
chr2 (1-94)||(9785379-9785473)
chr2 (1-94)||(21335613-21335707)
chr2 (13-96)||(23136316-23136400)
chr2 (105-210)||(23610572-23610679)
chr2 (9-94)||(22690484-22690569)
chr2 (9-94)||(22695080-22695165)
chr2 (1-74)||(22686687-22686760)
chr2 (1-82)||(23610272-23610354)
chr2 (90-159)||(25584161-25584233)
chr2 (1-91)||(28577835-28577932)
chr2 (90-210)||(34491239-34491364)
chr2 (139-217)||(24516168-24516246)
chr2 (143-216)||(36734444-36734515)
chr2 (179-217)||(27852690-27852728)
chr2 (100-137)||(28652626-28652663)
chr2 (139-209)||(2523747-2523817)
chr2 (179-213)||(3539859-3539893)
chr2 (179-213)||(17307508-17307542)
chr2 (179-213)||(22501993-22502027)
chr2 (179-213)||(22509927-22509961)
chr2 (179-213)||(25142226-25142260)
chr2 (161-210)||(357885-357934)
[»] scaffold0031 (2 HSPs)
scaffold0031 (90-213)||(127339-127465)
scaffold0031 (14-98)||(127722-127807)
[»] scaffold0174 (3 HSPs)
scaffold0174 (92-213)||(19789-19912)
scaffold0174 (148-213)||(5445-5510)
scaffold0174 (144-209)||(11603-11668)
[»] scaffold0379 (1 HSPs)
scaffold0379 (92-209)||(10881-10999)
[»] scaffold0004 (4 HSPs)
scaffold0004 (90-213)||(75867-75993)
scaffold0004 (90-209)||(73017-73139)
scaffold0004 (144-213)||(111347-111416)
scaffold0004 (143-211)||(66070-66138)
[»] scaffold0555 (1 HSPs)
scaffold0555 (104-213)||(8742-8854)
[»] scaffold0414 (2 HSPs)
scaffold0414 (105-209)||(11160-11267)
scaffold0414 (1-94)||(11508-11602)
[»] scaffold1186 (1 HSPs)
scaffold1186 (105-217)||(1966-2080)
[»] scaffold0878 (2 HSPs)
scaffold0878 (105-213)||(3418-3528)
scaffold0878 (12-74)||(3927-3989)
[»] scaffold0005 (1 HSPs)
scaffold0005 (105-217)||(186188-186302)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-94)||(38558-38652)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-94)||(95147-95241)
[»] scaffold0730 (1 HSPs)
scaffold0730 (124-213)||(6501-6590)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-96)||(14130-14226)
[»] scaffold0109 (2 HSPs)
scaffold0109 (1-96)||(5438-5534)
scaffold0109 (1-96)||(135-231)
[»] scaffold0369 (2 HSPs)
scaffold0369 (105-213)||(15612-15721)
scaffold0369 (1-74)||(16120-16193)
[»] scaffold0048 (1 HSPs)
scaffold0048 (138-216)||(68719-68797)
[»] scaffold0032 (2 HSPs)
scaffold0032 (1-94)||(62198-62292)
scaffold0032 (105-213)||(61844-61957)
[»] scaffold0029 (1 HSPs)
scaffold0029 (9-94)||(12034-12120)
[»] scaffold0546 (1 HSPs)
scaffold0546 (1-96)||(7773-7869)
[»] scaffold0254 (1 HSPs)
scaffold0254 (9-96)||(21495-21583)
[»] scaffold0676 (2 HSPs)
scaffold0676 (109-213)||(2831-2937)
scaffold0676 (106-165)||(2762-2824)
[»] scaffold0232 (1 HSPs)
scaffold0232 (1-94)||(4066-4160)
[»] scaffold0231 (2 HSPs)
scaffold0231 (105-217)||(17513-17627)
scaffold0231 (9-74)||(11811-11876)
[»] scaffold0203 (2 HSPs)
scaffold0203 (1-94)||(18287-18381)
scaffold0203 (105-213)||(17936-18046)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-94)||(22825-22919)
[»] scaffold0063 (2 HSPs)
scaffold0063 (1-94)||(39070-39164)
scaffold0063 (23-96)||(62538-62612)
[»] scaffold0630 (1 HSPs)
scaffold0630 (1-96)||(8861-8957)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-96)||(41136-41232)
[»] scaffold0056 (2 HSPs)
scaffold0056 (105-210)||(18221-18328)
scaffold0056 (179-217)||(67143-67181)
[»] scaffold0695 (1 HSPs)
scaffold0695 (1-94)||(6681-6775)
[»] scaffold0040 (2 HSPs)
scaffold0040 (1-94)||(13151-13245)
scaffold0040 (162-217)||(106043-106098)
[»] scaffold0247 (1 HSPs)
scaffold0247 (90-209)||(1008-1128)
[»] scaffold0230 (1 HSPs)
scaffold0230 (17-96)||(14702-14782)
[»] scaffold0028 (5 HSPs)
scaffold0028 (13-96)||(134961-135045)
scaffold0028 (13-96)||(137430-137514)
scaffold0028 (13-96)||(139899-139983)
scaffold0028 (13-96)||(142368-142452)
scaffold0028 (13-96)||(144837-144921)
[»] scaffold0086 (1 HSPs)
scaffold0086 (143-214)||(35181-35252)
[»] scaffold0594 (1 HSPs)
scaffold0594 (144-214)||(2234-2304)
[»] scaffold0148 (1 HSPs)
scaffold0148 (109-213)||(8792-8900)
[»] scaffold0853 (1 HSPs)
scaffold0853 (105-209)||(2454-2562)
[»] scaffold0108 (3 HSPs)
scaffold0108 (1-96)||(6214-6310)
scaffold0108 (1-52)||(6987-7038)
scaffold0108 (147-216)||(6408-6477)
[»] scaffold0220 (1 HSPs)
scaffold0220 (146-213)||(13938-14005)
[»] scaffold0061 (2 HSPs)
scaffold0061 (109-213)||(14582-14689)
scaffold0061 (109-213)||(23640-23747)
[»] scaffold0575 (1 HSPs)
scaffold0575 (1-94)||(5488-5581)
[»] scaffold0439 (2 HSPs)
scaffold0439 (90-179)||(12241-12333)
scaffold0439 (14-86)||(4232-4305)
[»] scaffold0505 (1 HSPs)
scaffold0505 (100-209)||(4877-4988)
[»] scaffold0139 (2 HSPs)
scaffold0139 (150-210)||(23527-23587)
scaffold0139 (106-214)||(40156-40268)
[»] scaffold0516 (2 HSPs)
scaffold0516 (1-72)||(7804-7875)
scaffold0516 (105-210)||(5304-5411)
[»] scaffold0431 (2 HSPs)
scaffold0431 (146-209)||(5620-5685)
scaffold0431 (14-96)||(5441-5524)
[»] scaffold0017 (1 HSPs)
scaffold0017 (100-216)||(26668-26786)
[»] scaffold0007 (2 HSPs)
scaffold0007 (105-216)||(16412-16526)
scaffold0007 (156-214)||(18696-18754)
[»] scaffold0454 (1 HSPs)
scaffold0454 (20-96)||(338-415)
[»] scaffold0363 (1 HSPs)
scaffold0363 (20-96)||(10001-10078)
[»] scaffold0328 (1 HSPs)
scaffold0328 (168-213)||(18636-18681)
[»] scaffold0213 (1 HSPs)
scaffold0213 (106-213)||(19154-19263)
[»] scaffold0162 (3 HSPs)
scaffold0162 (9-94)||(24227-24310)
scaffold0162 (105-134)||(23959-23988)
scaffold0162 (176-208)||(23893-23925)
[»] scaffold0461 (1 HSPs)
scaffold0461 (90-137)||(12417-12464)
[»] scaffold0149 (2 HSPs)
scaffold0149 (162-217)||(21616-21671)
scaffold0149 (179-217)||(29565-29603)
[»] scaffold0035 (2 HSPs)
scaffold0035 (143-214)||(43782-43851)
scaffold0035 (171-214)||(39090-39132)
[»] scaffold1941 (1 HSPs)
scaffold1941 (139-217)||(120-198)
[»] scaffold0205 (1 HSPs)
scaffold0205 (171-216)||(5609-5653)
[»] scaffold0371 (1 HSPs)
scaffold0371 (14-96)||(10604-10687)
[»] scaffold0003 (1 HSPs)
scaffold0003 (139-214)||(96380-96455)
[»] scaffold0802 (1 HSPs)
scaffold0802 (179-217)||(4701-4739)
[»] scaffold0298 (1 HSPs)
scaffold0298 (144-198)||(372-426)
[»] scaffold0207 (1 HSPs)
scaffold0207 (179-217)||(13384-13422)
[»] scaffold1160 (1 HSPs)
scaffold1160 (9-96)||(490-578)
[»] scaffold0112 (1 HSPs)
scaffold0112 (138-214)||(2870-2946)
[»] scaffold0104 (2 HSPs)
scaffold0104 (96-144)||(14892-14940)
scaffold0104 (96-144)||(16912-16960)
[»] scaffold0337 (1 HSPs)
scaffold0337 (97-214)||(3143-3261)
[»] scaffold0058 (1 HSPs)
scaffold0058 (97-214)||(59651-59769)
[»] scaffold0039 (1 HSPs)
scaffold0039 (14-96)||(10086-10169)
[»] scaffold0334 (1 HSPs)
scaffold0334 (179-217)||(540-578)
[»] scaffold0285 (1 HSPs)
scaffold0285 (13-90)||(19369-19447)
[»] scaffold0241 (1 HSPs)
scaffold0241 (179-217)||(3204-3242)
[»] scaffold0113 (1 HSPs)
scaffold0113 (179-217)||(35512-35550)
[»] scaffold0037 (1 HSPs)
scaffold0037 (179-217)||(112958-112996)
[»] scaffold0401 (1 HSPs)
scaffold0401 (14-86)||(8632-8705)
[»] scaffold1256 (1 HSPs)
scaffold1256 (146-210)||(2199-2263)


Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 21399558 - 21399777
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaattttgc 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21399558 ttgattcaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaattttgc 21399657  T
Q  101 aatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtccc 197  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21399658 aatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtccc 21399757  T
Q  198 acccttaccttagattgatc 217  Q
    ||||||||||||||||||||    
T  21399758 acccttaccttagattgatc 21399777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 21794051 - 21794270
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaattttgc 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21794051 ttgattcaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaattttgc 21794150  T
Q  101 aatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtccc 197  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21794151 aatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtccc 21794250  T
Q  198 acccttaccttagattgatc 217  Q
    ||||||||||||||||||||    
T  21794251 acccttaccttagattgatc 21794270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 18834267 - 18834474
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaattttgc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  |  ||||||||||||||||||||||    
T  18834267 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaaccaaaatattatttagaaaatcatcaattttgc 18834366  T
Q  101 aatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  18834367 aatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccc-ttttagaatcatacaatccattattagagaaagctagtcccacc 18834465  T
Q  201 cttacctta 209  Q
    |||||||||    
T  18834466 cttacctta 18834474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 22610386 - 22610262
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaag 189  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22610386 atcaattttacaaattaaccataatttctataacatcaaaactaacaaaataacatgttaaacccctttttagaatcatacaactcattattagagaaag 22610287  T
Q  190 ctagtcccacccttaccttagattg 214  Q
     ||||||||||||||||||||||||    
T  22610286 ttagtcccacccttaccttagattg 22610262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 23884101 - 23884225
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  23884101 atcaattgtgtaatttaaccctaatttctataacatcaaaactaacaaaagaacaacatgttaaacccctttttagaatcatacaacccat--ttagaga 23884198  T
Q  187 aagctagtcccacccttaccttagatt 213  Q
    ||||||||||| |||||||||||||||    
T  23884199 aagctagtcccgcccttaccttagatt 23884225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1485138 - 1485232
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  1485138 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 1485232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5852718 - 5852624
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  5852718 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 5852624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14408870 - 14408776
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  14408870 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 14408776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 18816401 - 18816287
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||||||||| |||||||||||||||||||||||    
T  18816401 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtcccaccct 18816302  T
Q  203 taccttagattgatc 217  Q
    ||||||| |||||||    
T  18816301 taccttatattgatc 18816287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 4541791 - 4541702
Alignment:
Q  6 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  4541791 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 4541702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 22345145 - 22345220
Alignment:
Q  138 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22345145 aacaacatgttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 22345220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 22356805 - 22356880
Alignment:
Q  138 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22356805 aacaacatgttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 22356880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14824512 - 14824606
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  14824512 ttgatcccaaagtttgtctaaacatttatatacatcaaaaaagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 14824606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20045621 - 20045527
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  20045621 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 20045527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23914720 - 23914814
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||    
T  23914720 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatcaa 23914814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 45289965 - 45289877
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||||    
T  45289965 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaatt 45289877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 4484024 - 4484110
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  4484024 aaagtttgtctaaacatttatatacatcaaaaaagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 4484110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 21514637 - 21514743
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||| |||||||||||||| |||||||||||||    
T  21514637 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtcccaccct 21514736  T
Q  203 tacctta 209  Q
    |||||||    
T  21514737 tacctta 21514743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 24485454 - 24485370
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  24485454 tttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 24485370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4381047 - 4380954
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||| ||||    
T  4381047 ttgatcccaaagtttgtctaaacatttatatacatcaaaa-agactcaaaaccatataaaacttgacccaaaacattattttagaaaatcgtcaa 4380954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18816734 - 18816643
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcat 91  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| ||| |||| ||||||||    
T  18816734 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaacatataaaacttgacccaaaacattagtttacaaaatcat 18816643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 22208258 - 22208325
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22208258 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttagatt 22208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 36732514 - 36732411
Alignment:
Q  109 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 206  Q
    ||||||| ||||||||||||||||||||| ||| ||| | |||||| | |||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  36732514 cctaattcctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacacccttacc 36732415  T
Q  207 ttag 210  Q
    ||||    
T  36732414 ttag 36732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 18677476 - 18677394
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  18677476 tttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 18677394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22258559 - 22258469
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatca 90  Q
    ||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||| ||||||||||||||||    
T  22258559 ttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctgaaaaccatataaaacttgacccaaaacattattttagaaaatca 22258469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 22002503 - 22002587
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  22002503 tttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaaacattattttagaaaatcatcaatt 22002587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 4380723 - 4380616
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||||  |  ||||||||||| ||||||||||||    
T  4380723 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccct 4380624  T
Q  203 taccttag 210  Q
    ||||||||    
T  4380623 taccttag 4380616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 22483773 - 22483834
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttac 205  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  22483773 atgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 36305936 - 36306053
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaag 189  Q
    ||||| ||||||| |||||||||||||||||||||   |||| ||||| | | ||| ||||| || |||| ||||||||||||||  |||||||||||||    
T  36305936 atcaactttgcaaattaaccctaatttctataaca---aaac-aacaaca-accattttaaaacctttttcagaatcatacaaccg-ttattagagaaag 36306029  T
Q  190 ctagtcccacccttaccttagatt 213  Q
    |||||| |||||||||||||||||    
T  36306030 ctagtctcacccttaccttagatt 36306053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 22258369 - 22258306
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    ||||||||| ||||| |||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  22258369 gttaaacccttttttggaattatacaactcattattagagaaagctagtctcacccttacctta 22258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 21676701 - 21676590
Alignment:
Q  101 aatttaaccctaatttctataacatcaaaactaacaa-aacaacat-gttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    ||||||| |||||||||||||| |||||||||| ||| ||| |||  |||||||||  ||| | ||| ||| ||||||||||||||||| ||||||||||    
T  21676701 aatttaaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagagaa-gctagtccca 21676604  T
Q  199 cccttaccttagat 212  Q
    ||||||||||||||    
T  21676603 cccttaccttagat 21676590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 12577826 - 12577932
Alignment:
Q  106 aaccctaatttctataacatcaaaactaacaa-aacaacat--gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||| |||||||||||||||||||||| ||| | |   ||||||||| ||||  |||| |||||||  |||||||||||||| ||||||||||||    
T  12577826 aaccctaatctctataacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaact-attattagagaaagttagtcccaccct 12577924  T
Q  203 taccttag 210  Q
    ||||||||    
T  12577925 taccttag 12577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 21678958 - 21678841
Alignment:
Q  97 ttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaacat-gttaaacccctttttagaatcatacaacccattattagagaaagctagt 194  Q
    |||||||| || ||||||| |||||| |||||||||| ||| ||| |||  |||||||||  ||| | ||| ||| ||||||||||||||||| ||||||    
T  21678958 ttgcaattcaaacctaattgctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagagaa-gctagt 21678861  T
Q  195 cccacccttaccttagattg 214  Q
    ||||||||||||||||||||    
T  21678860 cccacccttaccttagattg 21678841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 22483924 - 22483994
Alignment:
Q  143 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    |||||||||||| |||| ||||| ||||||| ||||||||||||||| ||||||| | ||||||||||||||    
T  22483924 catgttaaaccctttttaagaattatacaactcattattagagaaagttagtccc-cgcttaccttagattg 22483994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 21676537 - 21676495
Alignment:
Q  171 aacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  21676537 aacccattattagagaa-gctagtcccacccttaccttagattg 21676495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22474567 - 22474650
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||||    
T  22474567 ttgtctaaccatttgtatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaatt 22474650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 22532180 - 22532125
Alignment:
Q  161 agaatcatacaacccattattagagaaagctagtcccacccttaccttagattgat 216  Q
    |||||||||||||  |  ||||||||||| ||||||||||||||||||||||||||    
T  22532180 agaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgat 22532125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 22536865 - 22536810
Alignment:
Q  161 agaatcatacaacccattattagagaaagctagtcccacccttaccttagattgat 216  Q
    |||||||||||||  |  ||||||||||| ||||||||||||||||||||||||||    
T  22536865 agaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgat 22536810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 18023621 - 18023567
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    ||||||||||| |||| ||||| |||||||||||  |||||||||||||||||||    
T  18023621 atgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 18023567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 38184977 - 38184923
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    ||||||||||| |||| ||||| |||||||||||  |||||||||||||||||||    
T  38184977 atgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 38184923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 23883758 - 23883843
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatttt 98  Q
    |||||||||||||| || |||| |||||  |||||||| ||| |||| |||| || ||||| |||||||| |||||||||||||||    
T  23883758 ttgtctaaacatttctaaacatgaaaaggcactcaaaatcatataaaacttggactaaaacattattttacaaaatcatcaatttt 23883843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 17906919 - 17906848
Alignment:
Q  139 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    ||||| ||||||| ||  ||| |||||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  17906919 acaacttgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 17906848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 17978657 - 17978574
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||  |||||||||||||||| |||||    
T  17978657 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaatattattttagaaaatcaccaatt 17978574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22208079 - 22208162
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||||    
T  22208079 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaatt 22208162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 36732604 - 36732549
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataac-atcaaaactaacaaaacaaca 144  Q
    ||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||||||    
T  36732604 atcaattttgcaaattaaccctaatttcaataacaatctaaattaacaaaacaaca 36732549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 6101783 - 6101745
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  6101783 attagagaaagttagtcccacctttaccttagattgatc 6101745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 20022070 - 20022036
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||| |||||||||||||||||||||||    
T  20022070 attagagaaagttagtcccacccttaccttagatt 20022036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 23900017 - 23899979
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  23900017 attagagaaagttagtcacacccttaccttagattgatc 23899979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 31722523 - 31722485
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  31722523 attagagaaagttagtcccacccttatcttagattgatc 31722485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 36727068 - 36727030
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  36727068 attagagaaagttagtctcacccttaccttagattgatc 36727030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 45469249 - 45469211
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  45469249 attagagaaagttagtctcacccttaccttagattgatc 45469211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 20397581 - 20397505
Alignment:
Q  138 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||| ||||| |  ||| ||||| |||||||  |  ||||||||||| || |||||||||||||||||||||    
T  20397581 aacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttaatcccacccttaccttagattg 20397505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38989251 - 38989347
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||| |||||  |||||||| ||||| ||||||| |  ||  |||||||||||| |||| ||||| ||||||  |||||||||||| |||||||||    
T  38989251 ttgattcaaaaacttgtctaaccatttctatacatgattaggcactcaaaaccatataaaacttgacccaaaatattattttagaaattcatcaatt 38989347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39020348 - 39020444
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||| |||||  |||||||| ||||| ||||||| |  ||  |||||||||||| |||| ||||| ||||||  |||||||||||| |||||||||    
T  39020348 ttgattcaaaaacttgtctaaccatttctatacatgattaggcactcaaaaccatataaaacttgacccaaaatattattttagaaattcatcaatt 39020444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 1e-98; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 58622 - 58409
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttg 99  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||||||||||    
T  58622 ttgatcccaaagtttatctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaacaaaaacattattttagaaaatcatcaattttg 58523  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58522 caatttaaccctaatttctttaacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccac 58423  T
Q  200 ccttaccttagatt 213  Q
    ||||||||||||||    
T  58422 ccttaccttagatt 58409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 15720619 - 15720838
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttg 99  Q
    ||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  15720619 ttgatcccaaagtttgtctaaacatttatatatatcaaaagaggctcaaaaccatataaaacttgaaccaaaacattattttagaaaatcatcaattttg 15720718  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 196  Q
    |||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15720719 caatttaaccataatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattatgagagaaagctagtcc 15720818  T
Q  197 cacccttaccttagattgat 216  Q
    |||| |||||||| ||||||    
T  15720819 cacctttaccttaaattgat 15720838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 90 - 213
Target Start/End: Complemental strand, 13744629 - 13744506
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaag 189  Q
    ||||| ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13744629 atcaactttgcaaattaaccctaatttctataacattaaaaataacaaaacaacatgttaaacccctttttagaatcataaaacccattattagagaaag 13744530  T
Q  190 ctagtcccacccttaccttagatt 213  Q
    ||||||||||||||||||||||||    
T  13744529 ctagtcccacccttaccttagatt 13744506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 36300757 - 36300634
Alignment:
Q  93 aattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcta 192  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36300757 aattttgcaatttaaccctaattcctatatcatcaaaactaacaaaataacatgttaaacccctttttagaatcatacaacccattattagagaaagcta 36300658  T
Q  193 gtcccacccttaccttagattgat 216  Q
    ||| |||| |||||||||||||||    
T  36300657 gtctcacctttaccttagattgat 36300634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 90 - 213
Target Start/End: Complemental strand, 8930887 - 8930761
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  8930887 atcaattttgcaaattaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagaga 8930788  T
Q  187 aagctagtcccacccttaccttagatt 213  Q
    ||  |||||||||||||||||||||||    
T  8930787 aatgtagtcccacccttaccttagatt 8930761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 33556225 - 33556100
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  33556225 atcaatttttcaatt-aaccctaatttctataacatcaaa-ctaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagaga 33556128  T
Q  187 aagctagtcccacccttaccttagattg 214  Q
    |||||||||||||||||| |||||||||    
T  33556127 aagctagtcccacccttatcttagattg 33556100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 15700852 - 15700731
Alignment:
Q  92 caattttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagc 190  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15700852 caattttgcaatt-aaccctaatttctataacattaaaactaacaacaactacatgttaaacccctttttagaaccatacaacccattattagagaaagc 15700754  T
Q  191 tagtcccacccttaccttagatt 213  Q
    ||||  || ||||||||||||||    
T  15700753 tagtatcatccttaccttagatt 15700731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 18570577 - 18570704
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||||| | ||| |||||| ||| ||||||||||||||||||||||||||||||   |||||||||||||| ||||||| |||||||||||||||||||    
T  18570577 atcaattctacaaattaaccataacttctataacatcaaaactaacaaaacaacaatatgttaaacccctttctagaatcttacaacccattattagaga 18570676  T
Q  187 aagctagtcccacccttaccttagattg 214  Q
    ||||||||| ||||||||||||||||||    
T  18570677 aagctagtctcacccttaccttagattg 18570704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 25943199 - 25943319
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaac---atgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||   |||||||||||||||| | || |||||||||||||||||||||    
T  25943199 atcaattttgcaatt-aaccctaatttctataacatcaaaacta-caaaacaacgaaatgttaaaccccttttcaaaaacatacaacccattattagaga 25943296  T
Q  187 aagctagtcccacccttacctta 209  Q
    |||||||||||||||||||||||    
T  25943297 aagctagtcccacccttacctta 25943319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 13315167 - 13315078
Alignment:
Q  124 atcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  13315167 atcaaaattaacaaaacaacatgttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttaccttagatt 13315078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15376139 - 15376045
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  15376139 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 15376045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 15575755 - 15575641
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||  ||| | |||||||| |||| ||||| |||||||||||||||||||||||||||||||||||     
T  15575755 taaccctaatttctataacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccc 15575656  T
Q  203 taccttagattgatc 217  Q
    |||||||||||||||    
T  15575655 taccttagattgatc 15575641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20384549 - 20384455
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  20384549 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 20384455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 457064 - 457153
Alignment:
Q  6 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  457064 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 457153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 47095394 - 47095511
Alignment:
Q  101 aatttaaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||| | |||||||  |||| ||||| || |||||||||||||||||||||||||||||    
T  47095394 aatttaaccctaatttctataacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtccca 47095493  T
Q  199 cccttaccttagattgat 216  Q
    ||||||||||||||||||    
T  47095494 cccttaccttagattgat 47095511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4691150 - 4691056
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  4691150 ttgatcccaaagtttgtctaaacatttttatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 4691056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 13870082 - 13870176
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||||||||||    
T  13870082 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaatttgacccaaaacattattttagaaaatcatcaa 13870176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16410796 - 16410890
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| ||||||| ||||||||||||||||||||    
T  16410796 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatattaaacttgacccaaaacattattttagaaaatcatcaa 16410890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16580457 - 16580551
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||| ||||||||||||||||||||    
T  16580457 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatagaaaacttgacccaaaacattattttagaaaatcatcaa 16580551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 27217598 - 27217692
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  27217598 ttgatcccaaagtttgtctaaacatttatatacatcaaaaaagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 27217692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 18874770 - 18874657
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaaa-acaacatgttaaaccccttttt--agaatcatacaacccattattagagaaagctagtcccaccc 201  Q
    ||||||||||||||||||||||||||||| |||  ||||   |||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||    
T  18874770 taaccctaatttctataacatcaaaactaccaactacaag--gttaaaccccttttttcagaattatacaacccattattagagaaagctagtctcaccc 18874673  T
Q  202 ttaccttagattgatc 217  Q
    ||||||||||||||||    
T  18874672 ttaccttagattgatc 18874657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32126227 - 32126323
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  32126227 ttgatcccaaagtttgtctaaacatttatataaatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 32126323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 18431452 - 18431543
Alignment:
Q  4 atccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  18431452 atcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 18431543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 708531 - 708421
Alignment:
Q  109 cctaatttctataacatcaaaactaaca-aaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 206  Q
    ||||||| ||||||||||||||||||||  ||| || | ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  708531 cctaattcctataacatcaaaactaacagcaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccctacc 708432  T
Q  207 ttagattgatc 217  Q
    |||||||||||    
T  708431 ttagattgatc 708421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14161110 - 14161020
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatca 90  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| ||||||| ||||||||||||||||    
T  14161110 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagtctcaaaaccatataaaacttgacccaaaacattattttagaaaatca 14161020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 18628302 - 18628396
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||  ||||||||||||||||||||    
T  18628302 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatacaaaacttgacccaaaatattattttagaaaatcatcaa 18628396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 18641008 - 18641102
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||  ||||||||||||||||||||    
T  18641008 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatacaaaacttgacccaaaatattattttagaaaatcatcaa 18641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 20252284 - 20252174
Alignment:
Q  109 cctaatttctataacatcaaaactaacaa-aacaaca-tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 206  Q
    ||||||||||||||||| |||||||| || ||| ||| |||||||||| |||| ||||| ||||||| |||||||||||||||||||||| |||||||||    
T  20252284 cctaatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacccttacc 20252185  T
Q  207 ttagattgatc 217  Q
    |||||||||||    
T  20252184 ttagattgatc 20252174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 20484816 - 20484910
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| |||||||| |||||||||||    
T  20484816 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaacattattttaaaaaatcatcaa 20484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 48212835 - 48212726
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccc--tttttagaatcatacaacccattattagagaaagctagtcccacc 200  Q
    ||||||||||||||||||||||||||||||||| ||  || ||||||||||||  ||||||||||||||||||| |||||| ||||||||||||| ||||    
T  48212835 taaccctaatttctataacatcaaaactaacaacaattacaatgttaaacccctttttttagaatcatacaacctattattggagaaagctagtcacacc 48212736  T
Q  201 cttaccttag 210  Q
    ||||||||||    
T  48212735 cttaccttag 48212726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 19195562 - 19195667
Alignment:
Q  109 cctaatttctataacatcaaaactaacaa-aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacct 207  Q
    ||||||| ||||||||||||||||||||| ||| ||| | | || ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  19195562 cctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttcagaattatacaactcattattagagaaagctagtcccacccttacct 19195661  T
Q  208 tagatt 213  Q
    ||||||    
T  19195662 tagatt 19195667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 43745602 - 43745709
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    |||| |||||||||||||||||||||||||||| ||| ||| | |||||||| |||| | ||| ||||||| ||||||||||||||||||||||||||||    
T  43745602 taactctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtcccaccct 43745701  T
Q  203 taccttag 210  Q
    ||||||||    
T  43745702 taccttag 43745709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 16233266 - 16233352
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  16233266 aaagtttgtctaaatatttatatacatcaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaa 16233352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 16460239 - 16460153
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||| ||||||||||||    
T  16460239 aaagtttgtctcaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattatttttgaaaatcatcaa 16460153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 26355393 - 26355311
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  26355393 tttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 26355311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 26357845 - 26357763
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  26357845 tttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 26357763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 45847072 - 45846986
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  45847072 aaagtttgtctaaacatttatatacgttaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 45846986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 41523668 - 41523752
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  41523668 tttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 41523752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 41526130 - 41526214
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  41526130 tttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 41526214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15576088 - 15575997
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcat 91  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||  |||||||| ||||||||    
T  15576088 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaatattattttataaaatcat 15575997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 43745221 - 43745300
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcat 91  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||    
T  43745221 tttgtctaaacatttatatacattaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcat 43745300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 20488177 - 20488271
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| |||| | ||| ||||||  ||||||||||||||||||||    
T  20488177 ttgatcccaaagtttatctaaacatttatatacatcaaaagagactcaaaatcatataaaacatgacccaaaatattattttagaaaatcatcaa 20488271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 38299738 - 38299804
Alignment:
Q  147 ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttagatt 38299804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 8488157 - 8488093
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  8488157 gttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttag 8488093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 8513816 - 8513752
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  8513816 gttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttag 8513752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 14948533 - 14948449
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  14948533 tttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaaacattattttagaaaatcatcaatt 14948449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 11392716 - 11392632
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||   ||||||| ||||||||||||||||||||    
T  11392716 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccacataaaactt--cccaaaacattattttagaaaatcatcaa 11392632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 18875098 - 18875009
Alignment:
Q  4 atccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaacttattttagaaaatcatcaa 94  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||||  ||| | ||||||||||||||||||||    
T  18875098 atcccaaagtttgtctaaacatttagatacatcaaaagagactcaaaaccatataaaaattgactcaaca-ttattttagaaaatcatcaa 18875009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 15700948 - 15700887
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttac 205  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||    
T  15700948 atgttaaacccctttttagaatcatacaactcattattagagaaagctagtctcccccttac 15700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 24702980 - 24703064
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||| | ||||||||||||||||||||||    
T  24702980 tttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaatcattattttagaaaatcatcaatt 24703064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 24705427 - 24705511
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||| | ||||||||||||||||||||||    
T  24705427 tttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaatcattattttagaaaatcatcaatt 24705511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 3287743 - 3287804
Alignment:
Q  156 tttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    |||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  3287743 ttttcagaattatacaacctattattagagaaagctagtctcacccttaccttagattgatc 3287804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8514009 - 8513913
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||||| ||||||||||||||||||||||  | |||||||| |||| ||||| | ||||  |||||||||||||||| |||||    
T  8514009 ttgatcccaaagtttgtctacacatttatatacatcaaaagagtatgaaaaccatataaaacttgacctaaaatattattttagaaaatcaccaatt 8513913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 16250287 - 16250219
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagat 212  Q
    ||||||||||| |||| | ||| ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  16250287 atgttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttagat 16250219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 43276797 - 43276744
Alignment:
Q  156 tttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  43276797 ttttcagaattatacaacccattattagagaaagttagtcccacccttacctta 43276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 4690769 - 4690662
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    |||||||||||||||||||||||||| ||| || ||| ||| | |||||||| |||| ||||| |||||||  |  ||||||||||| |||||||||| |    
T  4690769 taaccctaatttctataacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacctt 4690670  T
Q  203 taccttag 210  Q
    ||||||||    
T  4690669 taccttag 4690662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 14317883 - 14317966
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||||||||||| | |||| |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||||    
T  14317883 ttgtctaaccatttatatacatgataagacactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaatt 14317966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 8931230 - 8931145
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatttt 98  Q
    ||||||||||||||||| |||| |||||  |||||||||||| ||||  |||  ||||||| |||||||| |||||||||||||||    
T  8931230 ttgtctaaacatttataaacatgaaaaggcactcaaaaccatataaaatttggcccaaaacattattttacaaaatcatcaatttt 8931145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 19283040 - 19283108
Alignment:
Q  143 catgttaaaccccttttt--agaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    ||||||||||||| ||||  ||||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  19283040 catgttaaaccccctttttcagaattatacaacccattcttagagaaagttagtctcacccttacctta 19283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 9743320 - 9743237
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||||    
T  9743320 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaatt 9743237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 12127233 - 12127159
Alignment:
Q  139 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| |||||||||||||||||||||||    
T  12127233 acaacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagatt 12127159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 20586374 - 20586412
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  20586374 attagagaaagttagtcccacccttaccttagattgatc 20586412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 48807355 - 48807317
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  48807355 attagagaaagttagtcccacccttaccttagattgatc 48807317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3192466 - 3192393
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 74  Q
    ||||||| || |||||||||||||||| || |||| |||||| ||||||| |||| |||| ||| |||||||||    
T  3192466 ttgatcccaaggtttgtctaaacatttctaaacatgaaaagacactcaaatccatataaaacttaaaccaaaac 3192393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 48213188 - 48213107
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||| ||||| ||||||| | |||| |||||||||||| ||||  |||| | ||||| ||||||||||||||||||||    
T  48213188 ttgtctaaccatttctatacatgataagacactcaaaaccatataaaatttgacctaaaacattattttagaaaatcatcaa 48213107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 831915 - 831861
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    ||||||||||| ||||||||||  ||||||||||  ||||||||| |||||||||    
T  831915 atgttaaacccttttttagaattgtacaacccatctttagagaaaactagtccca 831861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 1197095 - 1197041
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    ||||||||||| ||||||||||  ||||||||||  ||||||||| |||||||||    
T  1197095 atgttaaacccttttttagaattgtacaacccatctttagagaaaactagtccca 1197041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 13315524 - 13315446
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcat 91  Q
    |||||||||||||| || |||| |||||  ||||||||||||  ||| | ||| ||||||| |||||||||||||||||    
T  13315524 ttgtctaaacatttctaaacatgaaaaggcactcaaaaccatacaaaacatgacccaaaacattattttagaaaatcat 13315446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 14218925 - 14218887
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  14218925 attagagaaagttagtctcacccttaccttagattgatc 14218887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 214
Target Start/End: Original strand, 16186930 - 16186960
Alignment:
Q  184 agaaagctagtcccacccttaccttagattg 214  Q
    |||||||||||||||||||||||||||||||    
T  16186930 agaaagctagtcccacccttaccttagattg 16186960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 20214129 - 20214203
Alignment:
Q  139 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    |||||||| ||||| |  ||| ||||| ||||||| ||  ||| ||||||| |||||||||||||||||||||||    
T  20214129 acaacatgctaaactcaatttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttagatt 20214203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 33556531 - 33556445
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatttt 98  Q
    |||||||||||||||  | |||| |||||  ||||||||||||  ||| | |||  |||||| ||||||||||||||||||||||||    
T  33556531 tttgtctaaacatttccaaacatgaaaaggcactcaaaaccatacaaaacatgactcaaaacattattttagaaaatcatcaatttt 33556445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 16186859 - 16186887
Alignment:
Q  105 taaccctaatttctataacatcaaaacta 133  Q
    |||||||||||||||||||||||||||||    
T  16186859 taaccctaatttctataacatcaaaacta 16186887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 24270018 - 24269942
Alignment:
Q  138 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||| ||||| |  ||| ||||| |||||||  |  ||||||||||| || |||||||||||||||||||||    
T  24270018 aacaacatgctaaactcaatttcagaattatacaacttaaaattagagaaagttaatcccacccttaccttagattg 24269942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 3e-96; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 14442015 - 14442234
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttg 99  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  14442015 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaacttgaaccaaaacattattttagaaaatcaacaattttg 14442114  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  14442115 caatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaaccgctttttagaatcatacaacccattattacagaaagctagtcc 14442214  T
Q  197 cacccttaccttagattgat 216  Q
    ||||||||||||||||||||    
T  14442215 cacccttaccttagattgat 14442234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 17685047 - 17684835
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttg 99  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  17685047 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaatttgaaccaaaacattattttagaaaatcatcaattttg 17684948  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaacaac---atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  17684947 caatttaaccctaatttctataacatcaaaactaacaaaacaacaagatgttaaacccctttttagaatcatacaacccattattacagaaaactagtcc 17684848  T
Q  197 cacccttacctta 209  Q
    |||||||||||||    
T  17684847 cacccttacctta 17684835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 54875679 - 54875474
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaa-ccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttgcaattta 106  Q
    ||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  54875679 aaagtttgtataaacatttatatacatcaaaagagacttaaaaaccatgtaaaacttgaaccaaaacattattttagaaaatcatcaattttgcaattta 54875580  T
Q  107 accctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 203  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54875579 accctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 54875480  T
Q  204 acctta 209  Q
    ||||||    
T  54875479 acctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 6159245 - 6159461
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttg 99  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||||| ||    
T  6159245 ttgatcccaaagtttgtctaaacatttttatacatcaaaagagactcaaaaccatataaaacttgaaccaaaacattattttggaaaatcatcaattctg 6159344  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  6159345 caatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcgagtct 6159444  T
Q  197 cacccttaccttagatt 213  Q
    |||||||||||||||||    
T  6159445 cacccttaccttagatt 6159461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 17669910 - 17669698
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaactt-attttagaaaatcatcaattttg 99  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||| |||||    
T  17669910 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactctaaaccatgtaaaactggaaccaaaactttattttagaaaatcatcatttttg 17669811  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaac---aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 196  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17669810 caatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 17669711  T
Q  197 cacccttacctta 209  Q
    || | ||||||||    
T  17669710 catcattacctta 17669698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 2841718 - 2841498
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttg 99  Q
    ||||||| |||||||||| |||||||||||| |||||||| |||||||||||||| | || ||||| ||||||| |||||||||||||||||||||| ||    
T  2841718 ttgatcccaaagtttgtcaaaacatttatatgcatcaaaatagactcaaaaccatattaaacttgatccaaaacattattttagaaaatcatcaattctg 2841619  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 196  Q
    ||||||||| |||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  2841618 caatttaactctaatttctataacatcaaaactaacaaaacaacaacatgttaaacctctttttagaatcatacaacccattattagagaaagctagtca 2841519  T
Q  197 cacccttaccttagattgatc 217  Q
    |||||||||||||||||||||    
T  2841518 cacccttaccttagattgatc 2841498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 6156564 - 6156770
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttgcaatttaacccta 112  Q
    |||||||||||||| || |||| |||||  |||||||||||| |||| |||| || ||||| |||||||||||||||||||||| |||||||||||||||    
T  6156564 ttgtctaaacatttctaaacatgaaaaggcactcaaaaccatataaaacttggactaaaacattattttagaaaatcatcaattctgcaatttaacccta 6156663  T
Q  113 atttctataacatcaaaactaacaa---aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    |||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6156664 atttctataacatcaaaactaacaaaacaacaacatgttaaacccc-ttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 6156762  T
Q  210 gattgatc 217  Q
    ||||||||    
T  6156763 gattgatc 6156770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 3527262 - 3527154
Alignment:
Q  104 ttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3527262 ttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttaaaatcatacaacccattattagagaaagctagtcccaccctt 3527163  T
Q  204 accttagat 212  Q
    |||||||||    
T  3527162 accttagat 3527154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 24549057 - 24548953
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctta 204  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  24549057 taaccctaatttctataacatcaaa-ctaacaaaacaacatattaaacccctttttagaatcatacaacccattattagataaagttagtctcaccctta 24548959  T
Q  205 ccttag 210  Q
    | ||||    
T  24548958 ctttag 24548953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 14520388 - 14520506
Alignment:
Q  101 aatttaaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||| | |||||||  |||||||||| |||||||||||||||| |||||||||||||||    
T  14520388 aatttaaccctaatttttataacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtccca 14520487  T
Q  199 cccttaccttagattgatc 217  Q
    |||||||||||||||||||    
T  14520488 cccttaccttagattgatc 14520506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 22841405 - 22841274
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca-------tgttaaacccctttttagaatcatacaacccattatta 182  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||||||||||||||       |||||||||| |||| ||||| ||||||||||||||||    
T  22841405 atcaattctacaaattaaccctaatttctataacctcaaaactaacaaaacaacaacaatcatgttaaaccctttttcagaattatacaacccattatta 22841306  T
Q  183 gagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||||||||||||||||| ||||||||    
T  22841305 gagaaagctagtcccacccttacattagattg 22841274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 50755365 - 50755266
Alignment:
Q  101 aatttaaccctaatttctataacatcaaaactaacaaa---acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtccc 197  Q
    |||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  50755365 aattaaaccctaatttctataacatcaaaactaacaaagcaacaacatgttaaacccctttttagaatcatacaatccattattagagaaagttagtccc 50755266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6468560 - 6468466
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  6468560 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 6468466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 17208470 - 17208584
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | ||||| || |||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  17208470 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtcccaccct 17208569  T
Q  203 taccttagattgatc 217  Q
    |||||||||||||||    
T  17208570 taccttagattgatc 17208584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 17463914 - 17464008
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  17463914 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 17464008  T

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Target: chr3; HSP #16
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 24547146 - 24547253
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 201  Q
    ||||||||||||||||||||||||| |||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || ||    
T  24547146 taaccctaatttctataacatcaaa-ctaacaaaacaacaacatgttaaactcctttttagaatcatacaacccattattagagaaagatagtctcatcc 24547244  T
Q  202 ttaccttag 210  Q
    |||||||||    
T  24547245 ttaccttag 24547253  T

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Target: chr3; HSP #17
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 34160062 - 34160156
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  34160062 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 34160156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 45577867 - 45577773
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  45577867 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 45577773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13151214 - 13151118
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  13151214 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 13151118  T

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Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13153682 - 13153586
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  13153682 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 13153586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10541713 - 10541619
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  10541713 ttgatcccaaagtttttctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 10541619  T

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Target: chr3; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 15413167 - 15413261
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  15413167 ttgatcccaaagtttgtctaaacatttatatacatcaaaatagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 15413261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 17208137 - 17208231
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  17208137 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccgaaaacattattttagaaaatcatcaa 17208231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 55477236 - 55477322
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  55477236 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 55477322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14520059 - 14520153
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  14520059 ttgatcccaaagtttgactaaacatttatacacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 14520153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 45606323 - 45606237
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  45606323 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaa 45606237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 12917372 - 12917301
Alignment:
Q  143 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  12917372 catgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttagattg 12917301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14671621 - 14671716
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatc-aaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||    
T  14671621 ttgatcccaaagtttgtctaaacatttatatacatcaaaaagagactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatcaa 14671716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10247148 - 10247054
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||| ||||||  ||||||||||||||||||||    
T  10247148 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaatttgacccaaaatattattttagaaaatcatcaa 10247054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14508644 - 14508740
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||| |||||||||||||||| |||||    
T  14508644 ttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctgaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaatt 14508740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 14641611 - 14641544
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  14641611 gttaaacccttttttagaattatacaacccattattagagaaagctaatcccacccttaccttagatt 14641544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 15978287 - 15978365
Alignment:
Q  17 tctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  15978287 tctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 15978365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5215444 - 5215540
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||  |||||||||||||||| |||||    
T  5215444 ttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctaaaaaccatataaaacttgacccaaaatattattttagaaaatcaccaatt 5215540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 7780759 - 7780675
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  7780759 tttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgatcaaaaacattattttagaaaatcatcaatt 7780675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 14152654 - 14152558
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||| |||||||||||||||||||||||  || |||||||| |||| ||||| ||||||| |||||||||||||||| |||||    
T  14152654 ttgatcccaaagtttgtcaaaacatttatatacatcaaaagattctgaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaatt 14152558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 16453688 - 16453605
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||||    
T  16453688 tttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttga-ccaaaacattattttagaaaatcatcaatt 16453605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 28848033 - 28847949
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||| ||||    
T  28848033 tttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatgaatt 28847949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 54330561 - 54330465
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||| || ||||  |||| ||||||  |||||||||||||||| |||||    
T  54330561 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagattcaaaactatataaaatttgacccaaaatattattttagaaaatcaccaatt 54330465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 29907584 - 29907695
Alignment:
Q  105 taaccctaatttctataa-catcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 201  Q
    |||||||||||||| ||| ||||||| ||||||| ||| ||| | |||||||| |||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  29907584 taaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccaccc 29907683  T
Q  202 ttaccttagatt 213  Q
    ||||||||||||    
T  29907684 ttaccttagatt 29907695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 29948750 - 29948861
Alignment:
Q  105 taaccctaatttctataa-catcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 201  Q
    |||||||||||||| ||| ||||||| ||||||| ||| ||| | |||||||| |||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  29948750 taaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccaccc 29948849  T
Q  202 ttaccttagatt 213  Q
    ||||||||||||    
T  29948850 ttaccttagatt 29948861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 29997904 - 29998015
Alignment:
Q  105 taaccctaatttctataa-catcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 201  Q
    |||||||||||||| ||| ||||||| ||||||| ||| ||| | |||||||| |||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  29997904 taaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccaccc 29998003  T
Q  202 ttaccttagatt 213  Q
    ||||||||||||    
T  29998004 ttaccttagatt 29998015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 45803396 - 45803326
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  45803396 atgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccctaactttagattg 45803326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 14152462 - 14152398
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    ||||||||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  14152462 gttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccacccttaccttag 14152398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 5215636 - 5215707
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||| |||| | ||| ||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  5215636 gttaaaccctttttcataattatacaactcattattagagaaagctagtgccacccttaccttatattgatc 5215707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 3527618 - 3527533
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatttt 98  Q
    |||||||||||||| || |||| |||||  |||||||||||| |||| |||| |||||||| |||||||| |||||||||||||||    
T  3527618 ttgtctaaacatttctaaacataaaaaggcactcaaaaccatataaaacttggaccaaaacattattttacaaaatcatcaatttt 3527533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 3160740 - 3160622
Alignment:
Q  97 ttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagt 194  Q
    ||||||||||| |||||||||||||| |||||||||| ||| ||| || | ||||||||| |||||||||| |||  || ||| |||| |||| | ||||    
T  3160740 ttgcaatttaaacctaatttctataatatcaaaactatcaacaactacaaagttaaacccatttttagaattata-tactcatgattaaagaaggttagt 3160642  T
Q  195 cccacccttaccttagattg 214  Q
    | ||||||||||||||||||    
T  3160641 ctcacccttaccttagattg 3160622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 13522386 - 13522326
Alignment:
Q  104 ttaaccctaatttctataacatcaaaactaacaaaa---caacatgttaaaccccttttta 161  Q
    ||||||||||||||||||||||||||| ||||||||   ||||||||||||| ||||||||    
T  13522386 ttaaccctaatttctataacatcaaaattaacaaaacatcaacatgttaaactccttttta 13522326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 19568256 - 19568200
Alignment:
Q  161 agaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||||||||||||||    
T  19568256 agaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgatc 19568200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 213
Target Start/End: Complemental strand, 50350929 - 50350812
Alignment:
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaa-caacat--gttaaaccccttttt--agaatcatacaacccattattagagaaagctagt 194  Q
    |||| |||||||||| |||||||||||||||||||||||| | |||   |||||||||||||||  ||||| ||| | | ||| |||| |||| | ||||    
T  50350929 caatctaaccctaatctctataacatcaaaactaacaaaaactacaaaggttaaaccccttttttcagaattatata-ctcatgattaaagaaggttagt 50350831  T
Q  195 cccacccttaccttagatt 213  Q
    |||||||||||||||||||    
T  50350830 cccacccttaccttagatt 50350812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 16050909 - 16050980
Alignment:
Q  139 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    ||||| ||||||||||  ||| |||||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  16050909 acaacttgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 16050980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 2247931 - 2247877
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    ||||||||||| |||| ||||| |||||||||||  |||||||||||||||||||    
T  2247931 atgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 2247877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 13185917 - 13185955
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  13185917 attagagaaagttagtcccacccttaccttagattgatc 13185955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 40808018 - 40808056
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  40808018 attagagaaagttagtcccacccttaccttagattgatc 40808056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 40812855 - 40812893
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  40812855 attagagaaagttagtcccacccttaccttagattgatc 40812893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 44274440 - 44274478
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  44274440 attagagaaagttagtcccacccttaccttagattgatc 44274478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 45471771 - 45471809
Alignment:
Q  17 tctaaacatttatatacatcaaaagagactcaaaaccat 55  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  45471771 tctaaacatttatatacatcaaatgagactcaaaaccat 45471809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 15566733 - 15566800
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||| |||| ||||| |||||||  |  ||||||||||| ||||||||||||||| |||||||    
T  15566733 gttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttagatt 15566800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 53646300 - 53646217
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||||    
T  53646300 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaatt 53646217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 5200273 - 5200235
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  5200273 attagagaaagttagtcccacccttaccttagatggatc 5200235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 10563730 - 10563768
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  10563730 attagagaaagttagtcccaccattaccttagattgatc 10563768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 25202149 - 25202190
Alignment:
Q  171 aacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  25202149 aacccattattagcgaa-gctagtcccacccttaccttagatt 25202190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 33565109 - 33565147
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  33565109 attagagaaagttagtcacacccttaccttagattgatc 33565147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 35960958 - 35960920
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  35960958 attagagaaagttaatcccacccttaccttagattgatc 35960920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 12155138 - 12155102
Alignment:
Q  97 ttgcaatttaaccctaatttctataacatcaaaacta 133  Q
    |||||| |||||||||| |||||||||||||||||||    
T  12155138 ttgcaaattaaccctaacttctataacatcaaaacta 12155102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 12917775 - 12917715
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 74  Q
    ||||||||| |||| || |||| |||||| |||||||||||| |||| |||| ||||||||    
T  12917775 ttgtctaaatatttctaaacatgaaaagacactcaaaaccatataaaacttggaccaaaac 12917715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 39947 - 40167
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttg 99  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||| ||    
T  39947 ttgatcccaaagtttgtctaaatatttatatatatcaaaagagactcaaaaccatataaaacttgaaccaaaacattattttagaaaatcatcaattctg 40046  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  40047 caatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagttagtcg 40146  T
Q  197 cacccttaccttagattgatc 217  Q
    || ||||||||||||||||||    
T  40147 catccttaccttagattgatc 40167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 8e-85; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 20588476 - 20588695
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttg 99  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  20588476 ttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccatataaaacttgaaccaaaacattattttagaaaatcatcaattttg 20588575  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaac---aacatgttaaaccc--ctttttagaatcatacaacccattattagagaaagctagt 194  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||   ||||||||||||||||||||||||||||||||||||| |    
T  20588576 caatttaaccctaatttctataacatcaaaactaacaaaacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaat 20588675  T
Q  195 cccacccttaccttagattg 214  Q
    ||||||||||||||| ||||    
T  20588676 cccacccttaccttaaattg 20588695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 20593014 - 20593233
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttg 99  Q
    ||||||| |||||||||||||||||||||||| || ||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  20593014 ttgatcccaaagtttgtctaaacatttatataaataaaaagagactcaaaaccatataaaacttgaaccaaaacattattttagaaaatcatcaattttg 20593113  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaac---aacatgttaaaccc--ctttttagaatcatacaacccattattagagaaagctagt 194  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||   ||||||||||||||||||||||||||||||||||||| |    
T  20593114 caatttaaccctaatttctataacatcaaaactaacaaaacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaat 20593213  T
Q  195 cccacccttaccttagattg 214  Q
    ||||||||||||||| ||||    
T  20593214 cccacccttaccttaaattg 20593233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 34392698 - 34392825
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  34392698 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagaga 34392797  T
Q  187 aagctagtcccacccttaccttagattg 214  Q
    ||||||||| ||||||||||||||||||    
T  34392798 aagctagtcacacccttaccttagattg 34392825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 45499472 - 45499598
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||| |||||||||||||||||||||||||||| | |||||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||    
T  45499472 atcaactttgcaatttaaccctaatttctataacgttaaaactaacaaaacaacaacatgttaaacccctttatagaatcatacaacccattattagaga 45499571  T
Q  187 aagctagtcccacccttaccttagatt 213  Q
    ||||||||| |||||||||||||||||    
T  45499572 aagctagtctcacccttaccttagatt 45499598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 8306552 - 8306662
Alignment:
Q  106 aaccctaatttctataacatcaaaactaacaaaac---aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  8306552 aaccctaatttctataacatcaaaactaacaaaacgacaacatgttaaacccctttttagaattatacaacccattattagagaaagctagtcccactct 8306651  T
Q  203 taccttagatt 213  Q
    |||||||||||    
T  8306652 taccttagatt 8306662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 13989602 - 13989696
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  13989602 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 13989696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 21474505 - 21474416
Alignment:
Q  6 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  21474505 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 21474416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 51083019 - 51083110
Alignment:
Q  6 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||||    
T  51083019 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaatt 51083110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14237867 - 14237773
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  14237867 ttgatcccaaagtttgtctaaacatttatatgcatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 14237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 28476840 - 28476730
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||| |||||||||||||| |||||||||||||    
T  28476840 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtcccaccct 28476741  T
Q  203 taccttagatt 213  Q
    |||||||||||    
T  28476740 taccttagatt 28476730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23593157 - 23593060
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa--cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||   |||||||| |||||||||||||    
T  23593157 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaaacattattttaaaaaatcatcaatt 23593060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 24719949 - 24719855
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||| ||||| | ||||||||||||||||||||    
T  24719949 ttgatcccaaagtttgtctaaacatttatatacatctaaagagactcaaaaccatataaaacttgacccaaatcattattttagaaaatcatcaa 24719855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16362655 - 16362750
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa--cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||   ||||||||||||||||||||    
T  16362655 ttgatcccaaagtttgtttaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaaacattattttagaaaatcatcaa 16362750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 12710813 - 12710923
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||| ||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||||||| ||||||||||||||||||||| | |    
T  12710813 taaccttaatttctataacatcaaaactaacaacaactacaagattaaaccctttttcagaattatacaacccaatattagagaaagctagtcccatctt 12710912  T
Q  203 taccttagatt 213  Q
    |||||||||||    
T  12710913 taccttagatt 12710923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 35895069 - 35895155
Alignment:
Q  127 aaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    |||| |||||||||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  35895069 aaaattaacaaaacaacatgttaaaacctttttcagaatcatacaacccattattagataaagctagtcctacccataccttagatt 35895155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 41373222 - 41373304
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||| |||||    
T  41373222 tttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaattatcaa 41373304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4596100 - 4596004
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||| ||||||||||||||||| ||||    
T  4596100 ttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctgaaaaccatataaaacttgacccaaaacattattttagaaaatcattaatt 4596004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 21922703 - 21922619
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  21922703 tttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 21922619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 24719620 - 24719514
Alignment:
Q  101 aatttaaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    ||||||||| |||||||||||||||||||||||| || ||| ||| | |||||||| |||| ||||| |||||||||||||||||||||||||||| |||    
T  24719620 aatttaaccttaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagt-cca 24719522  T
Q  199 cccttacc 206  Q
    ||||||||    
T  24719521 cccttacc 24719514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 50544861 - 50544932
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50544861 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattgatc 50544932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 38056762 - 38056668
Alignment:
Q  121 aacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  38056762 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtcccacccttaccttagatt 38056668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 17901860 - 17901792
Alignment:
Q  143 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 211  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  17901860 catgttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttaga 17901792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 635064 - 635001
Alignment:
Q  149 aaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagat 212  Q
    |||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||    
T  635064 aaacccttttttagaattatacaacctattattagagaaagctagtctcacccttaccttagat 635001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 24007330 - 24007224
Alignment:
Q  106 aaccctaatttctataacatcaaaactaacaa-aacaacat--gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||| |||||||||||||||||||||| ||| |||   ||||||||  |||| ||||| |||||| | ||||| |||||||||||||||||||||    
T  24007330 aaccctaatctctataacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaatc-attatcagagaaagctagtcccaccct 24007232  T
Q  203 taccttag 210  Q
    ||||||||    
T  24007231 taccttag 24007224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 22145729 - 22145666
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    ||||||||| |||| ||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  22145729 gttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 21841526 - 21841603
Alignment:
Q  20 aaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||| |||||| |||||||||||||||||||||| ||||  |||| | ||||| ||||||||||||||||||||||    
T  21841526 aaacatgtatatagatcaaaagagactcaaaaccatataaaatttgaccaaaaacattattttagaaaatcatcaatt 21841603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 6834162 - 6834230
Alignment:
Q  143 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 211  Q
    |||||||||||| |||| ||||| ||||||| ||||||||||||||||||||  ||||||| |||||||    
T  6834162 catgttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttaga 6834230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 7703140 - 7703179
Alignment:
Q  175 cattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7703140 cattattagagaaagctagtcccacccttaccttagattg 7703179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 7051970 - 7051914
Alignment:
Q  161 agaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||||||||||||||    
T  7051970 agaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgatc 7051914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 8276052 - 8275988
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    ||||||||| |||| ||||| |||| || |||||||||| |||||||||| ||||||||||||||    
T  8276052 gttaaaccctttttcagaattataccactcattattagataaagctagtcacacccttaccttag 8275988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 24723399 - 24723344
Alignment:
Q  161 agaatcatacaacccattattagagaaagctagtcccacccttaccttagattgat 216  Q
    |||||||||||||  |  ||||||||||| ||||||||||||||||||||||||||    
T  24723399 agaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgat 24723344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 51336467 - 51336532
Alignment:
Q  145 tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    ||||||| || |||| |||||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  51336467 tgttaaatccattttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 51336532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 16401897 - 16401963
Alignment:
Q  141 aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||| | |||||||||||||||||||    
T  16401897 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gttagtcccacccttacctta 16401963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 21168914 - 21168990
Alignment:
Q  138 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||| ||||| |  ||||||||| |||||||| |  ||||||||||| || | |||||||||||||||||||    
T  21168914 aacaacatgctaaactcaattttagaattatacaacctaaaattagagaaagttaattccacccttaccttagattg 21168990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 21239097 - 21239041
Alignment:
Q  161 agaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    |||||||||||||  |  ||||||||||| ||||||||||| |||||||||||||||    
T  21239097 agaatcatacaacttagaattagagaaagttagtcccacccataccttagattgatc 21239041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 4595883 - 4595845
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  4595883 attagagaaagttagtctcacccttaccttagattgatc 4595845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 13302924 - 13302962
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  13302924 attagagaaagttagtctcacccttaccttagattgatc 13302962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 42913071 - 42913109
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  42913071 attagagaaagttagtctcacccttaccttagattgatc 42913109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 12327807 - 12327742
Alignment:
Q  145 tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    ||||||| || |||| |||||||||||||  |  ||||||||||| ||||| ||||||||||||||    
T  12327807 tgttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttag 12327742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 21188147 - 21188111
Alignment:
Q  97 ttgcaatttaaccctaatttctataacatcaaaacta 133  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  21188147 ttgcaatttaaacctaacttctataacatcaaaacta 21188111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 44892259 - 44892343
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttga-accaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| |||||  ||||||| |||||||||||||||| |||||    
T  44892259 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgaccccaaaacattattttagaaaatcaccaatt 44892343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 32607530 - 32607312
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacat--caaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattt 97  Q
    ||||||| |||||||||||||||||||||||| ||  |||||||||||||||| ||| |||| ||||||||||||| |||||||||||||| ||||||||    
T  32607530 ttgatcccaaagtttgtctaaacatttatatatatatcaaaagagactcaaaaacatataaaacttgaaccaaaacattattttagaaaattatcaattt 32607431  T
Q  98 tgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagagaaagctagt 194  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32607430 tgcaatttaactctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagt 32607331  T
Q  195 cccacccttaccttagatt 213  Q
    |||||||||||||||||||    
T  32607330 cccacccttaccttagatt 32607312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 21398764 - 21398640
Alignment:
Q  92 caattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaa---catgttaaacccc-tttttagaatcatacaacccattattagagaa 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||    
T  21398764 caattttgcaatt-aaccctaatttctataacatcaaaactaacaaaacaaaaacatgttaaaccccctttttagaatcatacaacccattattagagaa 21398666  T
Q  188 agctagtcccacccttaccttagatt 213  Q
    ||||| ||||||||||||||||||||    
T  21398665 agctaatcccacccttaccttagatt 21398640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 18744445 - 18744539
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  18744445 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 18744539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 18744820 - 18744934
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    |||||||||||||||||||||||||||||| || ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  18744820 taaccctaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtcccaccct 18744919  T
Q  203 taccttagattgatc 217  Q
    |||||||||||||||    
T  18744920 taccttagattgatc 18744934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 39245872 - 39245966
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  39245872 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 39245966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 16063701 - 16063808
Alignment:
Q  109 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 206  Q
    ||||||| ||||||||||||||||||||| ||| ||| | |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  16063701 cctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtcccacccttacc 16063800  T
Q  207 ttagattg 214  Q
    ||||||||    
T  16063801 ttagattg 16063808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 23199647 - 23199553
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  23199647 ttgatcccaaagtttgtgtaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 23199553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38620172 - 38620266
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||| ||||||||||||||||||||    
T  38620172 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacatgacccaaaacgttattttagaaaatcatcaa 38620266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29346717 - 29346813
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||  ||||||||||||||||||||||    
T  29346717 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaatattattttagaaaatcatcaatt 29346813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29349190 - 29349286
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||  ||||||||||||||||||||||    
T  29349190 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaatattattttagaaaatcatcaatt 29349286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29351663 - 29351759
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||  ||||||||||||||||||||||    
T  29351663 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaatattattttagaaaatcatcaatt 29351759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 39364120 - 39364214
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||| ||||||| ||||||||||||||||||||    
T  39364120 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaatttgacccaaaacattattttagaaaatcatcaa 39364214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 264186 - 264098
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  264186 aaagtttgtctaaacatttatattcatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 264098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23065252 - 23065346
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||   ||||||| |||||||||||||| |||||    
T  23065252 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaactttccccaaaacattattttagaaaattatcaa 23065346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 23199313 - 23199207
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    |||||||||||||||||||||||||||||  || ||| ||| | |||||||  |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  23199313 taaccctaatttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtcccaccct 23199214  T
Q  203 tacctta 209  Q
    |||||||    
T  23199213 tacctta 23199207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 1627174 - 1627071
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa--aacaacatgttaaaccccttttt-agaatcatacaacccattattagagaaagctagtcccaccc 201  Q
    |||||||||||||||||||||||||||||||||  || |  | | ||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  1627174 taaccctaatttctataacatcaaaactaacaataaatacaagggtaaaccctttttttagaattatacaactcattattagagaaagctagtcccaccc 1627075  T
Q  202 ttac 205  Q
    ||||    
T  1627074 ttac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 10732351 - 10732267
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  10732351 tttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaaacattattttagaaaatcatcaatt 10732267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 42244776 - 42244692
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  42244776 tttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaaacattattttagaaaatcatcaatt 42244692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 660736 - 660841
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 203  Q
    |||||| |||||||||||||||||||||||||| ||| ||| | | || || |||| ||||| ||||||||| ||||||||||||||||||||| |||||    
T  660736 taacccaaatttctataacatcaaaactaacaacaactacaaggttaaacctttttcagaattatacaaccccttattagagaaagctagtccc-ccctt 660834  T
Q  204 accttag 210  Q
    |||||||    
T  660835 accttag 660841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 31621957 - 31622023
Alignment:
Q  138 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctta 204  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  31621957 aacaacatgttaaacccatttttagaatcatacaaccaattattagagaaagatagttccaccctta 31622023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 20909749 - 20909846
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttatttt-agaaaatcatcaatt 96  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| ||||  |||| ||||||  ||||||| | |||||||||||||    
T  20909749 ttgatcccaaagtttgtctaaacaattatatacatcaaaaaagactcaaaaccatataaaaattgacccaaaatattattttaaaaaaatcatcaatt 20909846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 22111911 - 22111977
Alignment:
Q  92 caattttgcaatttaaccctaatttctataacatcaaaactaacaa---aacaacatgttaaacccct 156  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  22111911 caattttgcaatt-aaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccct 22111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 6551392 - 6551282
Alignment:
Q  109 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 206  Q
    ||||||| ||||||||||||| ||||||| ||| ||| | |||||||| |||| ||||| |||||||  |  ||||||||||| ||||| ||||||||||    
T  6551392 cctaattcctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcacccttacc 6551293  T
Q  207 ttagattgatc 217  Q
    |||||||||||    
T  6551292 ttagattgatc 6551282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 660287 - 660340
Alignment:
Q  21 aacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 74  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||||||    
T  660287 aacatttatatacatcaaaagagactcaaaaccatatcaaacttgaaccaaaac 660340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 14026048 - 14025965
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||||    
T  14026048 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaatt 14025965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 20313263 - 20313332
Alignment:
Q  143 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||||||  ||| ||||| ||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  20313263 catgttaaaccctatttcagaattata-aacccactattagagaa-gctagtcccacccttaccttagattg 20313332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 20469206 - 20469168
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  20469206 attagagaaagttagtcccacccttaccttagattgatc 20469168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 21504082 - 21504114
Alignment:
Q  101 aatttaaccctaatttctataacatcaaaacta 133  Q
    |||||||||||||||||||||||||||||||||    
T  21504082 aatttaaccctaatttctataacatcaaaacta 21504114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 31622098 - 31622173
Alignment:
Q  138 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||| ||||| |  ||| ||||| |||||||| |  ||||||||||| || ||||||||||||||||||||    
T  31622098 aacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttagatt 31622173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 21300074 - 21300040
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||| |||||||||||||||||||||||    
T  21300074 attagagaaagttagtcccacccttaccttagatt 21300040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 21617958 - 21617924
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||| |||||||||||||||||||||||    
T  21617958 attagagaaagttagtcccacccttaccttagatt 21617924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 20566568 - 20566605
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgat 216  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  20566568 attagagaaagttagtctcacccttaccttagattgat 20566605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 21503729 - 21503789
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 74  Q
    |||||||||||||| || |||| |||||  |||||||||||| |||| |||| ||||||||    
T  21503729 ttgtctaaacatttctaaacatgaaaaggcactcaaaaccatataaaacttggaccaaaac 21503789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 36508697 - 36508633
Alignment:
Q  145 tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    ||||||| || |||| |||||||||||||  |  ||||||||||| ||||| |||||||||||||    
T  36508697 tgttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttacctta 36508633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 55583036 - 55583251
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaattttg 99  Q
    ||||||| |||  |||||||||||||| || | || ||||   |||||||||||| |||| |||| |||||||| |||||||||||||||||||||||||    
T  55583036 ttgatcccaaaacttgtctaaacatttctaaatatgaaaatgcactcaaaaccatataaaacttggaccaaaacattattttagaaaatcatcaattttg 55583135  T
Q  100 caatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55583136 caatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttataatcatacaacccattattagagaaagctagtcc 55583235  T
Q  197 cacccttaccttagat 212  Q
    ||||||||||||||||    
T  55583236 cacccttaccttagat 55583251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 9622419 - 9622548
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||    
T  9622419 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcagacaacccattattagaga 9622518  T
Q  187 aagctagtcccacccttaccttagattgat 216  Q
    ||||||||||||||||||||||||||||||    
T  9622519 aagctagtcccacccttaccttagattgat 9622548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 10273350 - 10273439
Alignment:
Q  124 atcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10273350 atcaaaattaacaaaacaacatgttatacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 10273439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 14631081 - 14631195
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  14631081 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 14631180  T
Q  203 taccttagattgatc 217  Q
    |||||||||||||||    
T  14631181 taccttagattgatc 14631195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7640612 - 7640518
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  7640612 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 7640518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15117778 - 15117684
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  15117778 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 15117684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18239038 - 18238944
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  18239038 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 18238944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 25513797 - 25513907
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaaca-tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||| |    
T  25513797 taaccctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccaccat 25513896  T
Q  203 taccttagatt 213  Q
    |||||||||||    
T  25513897 taccttagatt 25513907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3485705 - 3485801
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||||    
T  3485705 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaatt 3485801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 12033197 - 12033101
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||||    
T  12033197 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaatt 12033101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25031001 - 25031097
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||||    
T  25031001 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaatt 25031097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 44772506 - 44772415
Alignment:
Q  4 atccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  44772506 atcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 44772415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 2424876 - 2424782
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||| |||||||||||    
T  2424876 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttaaaaaatcatcaa 2424782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 19243439 - 19243533
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||| ||||||||||||||    
T  19243439 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattatagaaaatcatcaa 19243533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 1836936 - 1836850
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  1836936 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaa 1836850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 16296897 - 16296998
Alignment:
Q  118 tataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattga 215  Q
    |||||||||||||||||||| ||| || | ||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16296897 tataacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttagattga 16296996  T
Q  216 tc 217  Q
    ||    
T  16296997 tc 16296998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 14873511 - 14873415
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  14873511 ttgatccaaaaacttgtctaaccatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 14873415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 18022849 - 18022944
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatc-aaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||    
T  18022849 ttgatcccaaagtttgtctaaacatttatatacatcaaaaagagactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatcaa 18022944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 26446153 - 26446260
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||  |||| ||||| |||||||||||||||||||||||||||||| |||||    
T  26446153 taaccctaatttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtcctaccct 26446252  T
Q  203 taccttag 210  Q
    ||| ||||    
T  26446253 tactttag 26446260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 29268104 - 29268188
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  29268104 tttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 29268188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 44616039 - 44616123
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  44616039 tttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 44616123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 50221751 - 50221668
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||||    
T  50221751 tttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttga-ccaaaacattattttagaaaatcatcaatt 50221668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26445681 - 26445746
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttga 66  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  26445681 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttga 26445746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 14718126 - 14718042
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  14718126 tttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgatcaaaaacattattttagaaaatcatcaatt 14718042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 16296819 - 16296881
Alignment:
Q  106 aaccctaatttctataacatcaaaactaacaaaacaac---atgttaaacccctttttagaat 165  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  16296819 aaccctaatttctataacatcaaaactaacaaaacaacaatatgttaaacccctttttagaat 16296881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 9638999 - 9639066
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||| |||| ||||| | ||||| |||||||||||||||||||||||||||||||||||||||    
T  9638999 gttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttaccttagatt 9639066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 12424355 - 12424290
Alignment:
Q  146 gttaaaccccttttt--agaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    ||||||||| |||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12424355 gttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 12424290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 13847200 - 13847254
Alignment:
Q  156 tttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  13847200 tttttagaattatacaacccattattagagaaagctagtctcacccttaccttag 13847254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 35660906 - 35661002
Alignment:
Q  109 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 203  Q
    |||||||  |||||||||||||||||||| ||| ||| | |||||||  |||| | ||| |||||||||||||||||||||||||||||||||||||    
T  35660906 cctaattcatataacatcaaaactaacaacaactacaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccctt 35661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 33186892 - 33186955
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||    
T  33186892 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccctacctta 33186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 15239879 - 15239810
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattga 215  Q
    ||||||||| |||| ||| | ||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  15239879 gttaaaccctttttcagatttatacaattcattattagagaaagctagtctcacccttaccttagattga 15239810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 2424492 - 2424386
Alignment:
Q  106 aaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 203  Q
    ||||||||||||||||||||||||||||| || ||| ||| | |||||||| |||| | ||| |||||||  |  ||||||||||| ||||| |||||||    
T  2424492 aaccctaatttctataacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctcaccctt 2424393  T
Q  204 accttag 210  Q
    |||||||    
T  2424392 accttag 2424386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 19434607 - 19434551
Alignment:
Q  161 agaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||||||||||||||    
T  19434607 agaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgatc 19434551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 19566159 - 19566076
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||||    
T  19566159 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaatt 19566076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 33186713 - 33186796
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||| |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||||    
T  33186713 ttgtctaaccatttctatacatgataagacactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaatt 33186796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 44023844 - 44023761
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||| |||||||||||| |||| ||||| | ||||| |||||||||||||||| |||||    
T  44023844 ttgtctaaccatttctatacatgataagacactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcaccaatt 44023761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 15115244 - 15115282
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  15115244 attagagaaagttagtcccacccttaccttagattgatc 15115282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 37019652 - 37019730
Alignment:
Q  139 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| ||||| |||||||||||||||||||||    
T  37019652 acaacatgttaaactcaatttcagaattatacaacttaaaattagagaaagttagtcacacccttaccttagattgatc 37019730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 12424534 - 12424451
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| || |||| | |||| |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||||    
T  12424534 ttgtctaaccatttctaaacatgataagaaactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaatt 12424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 9924176 - 9924214
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  9924176 attagagaaagttagtctcacccttaccttagattgatc 9924214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 14549782 - 14549820
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  14549782 attagagaaagttagtctcacccttaccttagattgatc 14549820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 17143009 - 17143063
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    |||||||||||||||| ||||| ||||||| |||  ||||||||||||| |||||    
T  17143009 atgttaaaccccttttcagaattatacaactcatctttagagaaagctattccca 17143063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 133
Target Start/End: Original strand, 14477573 - 14477606
Alignment:
Q  100 caatttaaccctaatttctataacatcaaaacta 133  Q
    |||||||||||||| |||||||||||||||||||    
T  14477573 caatttaaccctaacttctataacatcaaaacta 14477606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 25513583 - 25513636
Alignment:
Q  44 actcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  25513583 actcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 25513636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 45314194 - 45314157
Alignment:
Q  100 caatttaaccctaatttctataacatcaaaactaacaa 137  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  45314194 caatctaaccctaatctctataacatcaaaactaacaa 45314157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 46741040 - 46741093
Alignment:
Q  44 actcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||| |||| ||||| ||||||| |||||||||||||||| |||||    
T  46741040 actcaaaaccatataaaacttgacccaaaacattattttagaaaatcaccaatt 46741093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 1e-52; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 10446147 - 10446273
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  10446147 atcaattttgcaaattaaccctaatttctataacatcgaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagaga 10446246  T
Q  187 aagctagtcccacccttaccttagatt 213  Q
    |||||||||||||||||||||||||||    
T  10446247 aagctagtcccacccttaccttagatt 10446273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18334018 - 18333924
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  18334018 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 18333924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 19858348 - 19858254
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  19858348 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 19858254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 24423283 - 24423377
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  24423283 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 24423377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26923871 - 26923777
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  26923871 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 26923777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33865014 - 33865108
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  33865014 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 33865108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 2290599 - 2290510
Alignment:
Q  6 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  2290599 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 2290510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 22782964 - 22783058
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  22782964 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 22783058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 21686422 - 21686329
Alignment:
Q  4 atccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||||    
T  21686422 atcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaatt 21686329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 1540337 - 1540241
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  1540337 ttgatcccaaagtttgtctaaacatttatataaatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 1540241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 8055775 - 8055861
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||    
T  8055775 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaa 8055861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 12743068 - 12743152
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  12743068 tttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 12743152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 17882909 - 17882825
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  17882909 tttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 17882825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23656137 - 23656233
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||  |||||||||||||||| |||||    
T  23656137 ttgatcctaaagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaatattattttagaaaatcaccaatt 23656233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17318377 - 17318281
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||| |||||||||||||||| |||||    
T  17318377 ttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctgaaaaccatataaaacttgatccaaaacattattttagaaaatcaccaatt 17318281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 21683171 - 21683074
Alignment:
Q  114 tttctataacatcaaaactaacaaaacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    ||||||||||||||||||||  | ||| ||| | |||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21683171 tttctataacatcaaaactacaacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttag 21683074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 33862545 - 33862629
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  33862545 tttgtctaaacatttatatagatcaaaagagactcaaaatcatataaaacttgaccaaaaacattattttagaaaatcatcaatt 33862629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 29045257 - 29045325
Alignment:
Q  143 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 211  Q
    |||||||||||| |||| | ||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  29045257 catgttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttaga 29045325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 23658078 - 23658145
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||| |||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||||    
T  23658078 gttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttaccttagatt 23658145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 19825576 - 19825482
Alignment:
Q  121 aacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||||||||| ||| ||| | ||||| || |||| ||||| || |||||||||||||||||||||||||| |||||||||||||||||    
T  19825576 aacatcaaaactaacaacaactacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtctcacccttaccttagatt 19825482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 1818884 - 1818927
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaacta 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1818884 atcaattttgcaatttaaccctaatttctataacatcaaaacta 1818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 15998835 - 15998942
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| || | ||||||| | |||| ||||| |||||||  |  ||||||||||| ||||| ||||||    
T  15998835 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacttagaattagagaaagttagtctcaccct 15998934  T
Q  203 taccttag 210  Q
    ||||||||    
T  15998935 taccttag 15998942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 20410616 - 20410512
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||  |||||||||||| || ||| ||| | ||||| || |||| ||||| |||||||||||||||||||||||||| | |||||||    
T  20410616 taaccctaatttctat--catcaaaactaataacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagctatttccaccct 20410519  T
Q  203 tacctta 209  Q
    |||||||    
T  20410518 tacctta 20410512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 18982561 - 18982631
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgat 216  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||| || ||||||| |||||||||||||||    
T  18982561 gttaaaccctttttcagaattatacaacccattattagataaagttaatcccaccgttaccttagattgat 18982631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 15890782 - 15890704
Alignment:
Q  139 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| |||||||||||||||||||||||||||    
T  15890782 acaacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatc 15890704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 34140554 - 34140452
Alignment:
Q  111 taatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctt 208  Q
    ||||| ||||||||||||||||||||| ||| ||| | |||||||   ||| | ||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  34140554 taattcctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattata-aacccattattagagaa-gctagtcccacccttacctt 34140457  T
Q  209 agatt 213  Q
    |||||    
T  34140456 agatt 34140452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 2077072 - 2077135
Alignment:
Q  32 acatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    |||||||||||||||||||| ||| |||| ||||| ||||||  ||||||||||||||||||||    
T  2077072 acatcaaaagagactcaaaatcatataaaacttgacccaaaatattattttagaaaatcatcaa 2077135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 17856835 - 17856773
Alignment:
Q  12 gtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 74  Q
    |||||||||||| |||||| |||| |||||| |||||||||||| ||||  ||||||||||||    
T  17856835 gtttgtctaaacgtttataaacatgaaaagacactcaaaaccatataaaagttgaaccaaaac 17856773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 34153109 - 34153068
Alignment:
Q  171 aacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  34153109 aacccattattagagaa-gctagtcccacccttaccttagatt 34153068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 18928535 - 18928618
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||  |||| ||||||| | |||  |||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||||    
T  18928535 ttgtctaacaatttctatacatgataaggcactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatcaatt 18928618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22557059 - 22557142
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| | || ||||| ||||||| |||||||||||||||| |||||    
T  22557059 ttgtctaaccatttctatacatgataaggcactcaaaaccatatgaaacttgacccaaaacattattttagaaaatcaccaatt 22557142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 28948579 - 28948634
Alignment:
Q  161 agaatcatacaacccattattagagaaagctagtcccacccttaccttagattgat 216  Q
    |||||||||||||  |  ||||||||||| ||||| ||||||||||||||||||||    
T  28948579 agaatcatacaacttagaattagagaaagttagtctcacccttaccttagattgat 28948634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 31734518 - 31734601
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||||    
T  31734518 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaatt 31734601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 10445807 - 10445893
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatttt 98  Q
    ||||||||||||||| || |||| |||||  ||||||||||||  ||| | ||| | ||||| |||||||| |||||||||||||||    
T  10445807 tttgtctaaacatttctaaacatgaaaaggcactcaaaaccatacaaaacatgaccaaaaacattattttacaaaatcatcaatttt 10445893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 13285739 - 13285804
Alignment:
Q  148 taaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    |||||||||||| ||||| ||  ||| ||| |||| |||| | |||||||||||||||||||||||    
T  13285739 taaaccccttttcagaattatgaaactcatgattatagaaggttagtcccacccttaccttagatt 13285804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 25601438 - 25601401
Alignment:
Q  100 caatttaaccctaatttctataacatcaaaactaacaa 137  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  25601438 caatctaaccctaatttctataacatgaaaactaacaa 25601401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 24267871 - 24267907
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattga 215  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  24267871 attagagaaagttagtcccacccttacctttgattga 24267907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 28345107 - 28344985
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaag 189  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28345107 atcaattttgcaaattaaccctaatttctataacatcgaaactaacaaaacaacatgttaaacccctttttagaatcatacagcccattattagagaaag 28345008  T
Q  190 ctagtcccacccttaccttagat 212  Q
    |||||| |||||||| |||||||    
T  28345007 ctagtcacacccttatcttagat 28344985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 23801477 - 23801552
Alignment:
Q  138 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23801477 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 23801552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 149610 - 149497
Alignment:
Q  106 aaccctaatttctataacatcaaaactaacaaaac---aacatgttaaaccccttttt---agaatcatacaacccattattagagaaagctagtcccac 199  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||   ||||| ||||||| |||||||||||||||||||| ||||    
T  149610 aaccctaatttctataacatcaaaactaacaaaacgacaacatgttaaaccccttttttttagaattatacaactcattattagagaaagctagttccac 149511  T
Q  200 ccttaccttagatt 213  Q
    ||||||||||||||    
T  149510 ccttaccttagatt 149497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 18809679 - 18809773
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  18809679 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 18809773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 21335372 - 21335258
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||| |||||||||||||||||||||||| || ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  21335372 taaccataatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 21335273  T
Q  203 taccttagattgatc 217  Q
    |||||||||||||||    
T  21335272 taccttagattgatc 21335258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 23711439 - 23711345
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  23711439 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 23711345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26506115 - 26506209
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  26506115 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 26506209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 27920190 - 27920096
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  27920190 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 27920096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 39683057 - 39683146
Alignment:
Q  6 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  39683057 ccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 39683146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 21315576 - 21315468
Alignment:
Q  111 taatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctt 208  Q
    |||||||||||||||||||||||| || ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21315576 taatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctt 21315477  T
Q  209 agattgatc 217  Q
    |||||||||    
T  21315476 agattgatc 21315468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38968216 - 38968312
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||||    
T  38968216 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaatt 38968312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21315917 - 21315823
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  21315917 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaa 21315823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 21368905 - 21368999
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  21368905 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 21368999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23131598 - 23131692
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  23131598 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 23131692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23134065 - 23134159
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  23134065 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 23134159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26508593 - 26508687
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  26508593 ttgatcccaaagtttgtctaaacatttatatacatcaaaacagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 26508687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 32038923 - 32038829
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  32038923 ttgatcccaaagtttgtctaaacatttatatacatcaaaaaagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 32038829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24897621 - 24897525
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||||    
T  24897621 ttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaatt 24897525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24905058 - 24904962
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||||    
T  24905058 ttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccacataaaacttgacccaaaacattattttagaaaatcatcaatt 24904962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 21369239 - 21369349
Alignment:
Q  105 taaccctaatttctataacatcaaaactaaca-aaacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    |||||||||||||||||||||||||||||| | |||| ||| | |||||||| |||| ||||| |||||||||||| |||||||||||| ||||||||||    
T  21369239 taaccctaatttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtcccaccct 21369338  T
Q  203 taccttagatt 213  Q
    |||||||||||    
T  21369339 taccttagatt 21369349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 34401948 - 34401854
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||| ||||||| ||||||||||||||||||||    
T  34401948 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaatttgacccaaaacattattttagaaaatcatcaa 34401854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 572134 - 572230
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| |||||||||||||| |||||||    
T  572134 ttgatcccaaagtttgtctaaacatttatataaatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaattatcaatt 572230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24900104 - 24900008
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||  ||||||||||||||||||||||    
T  24900104 ttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccacataaaacttgacccaaaatattattttagaaaatcatcaatt 24900008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24902581 - 24902485
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||  ||||||||||||||||||||||    
T  24902581 ttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccacataaaacttgacccaaaatattattttagaaaatcatcaatt 24902485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24907533 - 24907437
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||| |||||||||||||| |||||||    
T  24907533 ttgatcccaaagtttgtctaaacatttatatacataaaaagagactcaaaaccacataaaacttgagccaaaacattattttagaaaataatcaatt 24907437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9785379 - 9785473
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||  ||||||||||||||||||||    
T  9785379 ttgatcccaaagtttatctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaatattattttagaaaatcatcaa 9785473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21335707 - 21335613
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||  |||||| |||||||| |||||||||||    
T  21335707 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaatttgactcaaaacattattttaaaaaatcatcaa 21335613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 23136316 - 23136400
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  23136316 tttgtctaaacatttatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 23136400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 23610572 - 23610679
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||| ||||| ||| | | | |||||||  |||| | ||| ||||||||||||||||||||||||||||||||||||    
T  23610572 taaccctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccct 23610671  T
Q  203 taccttag 210  Q
    ||||||||    
T  23610672 taccttag 23610679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 22690484 - 22690569
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||| ||||||| ||||||||||||||||||||    
T  22690484 aaagtttgtctaaacatttatatacctcaaaagagactcaaaacc-tataaaacttgacccaaaacattattttagaaaatcatcaa 22690569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 22695080 - 22695165
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||| ||||||| ||||||||||||||||||||    
T  22695080 aaagtttgtctaaacatttatatacctcaaaagagactcaaaacc-tataaaacttgacccaaaacattattttagaaaatcatcaa 22695165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22686687 - 22686760
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 74  Q
    ||||||| |||||||||||||||||||||| |||| |||| |||||||||||||| |||| |||||||||||||    
T  22686687 ttgatcccaaagtttgtctaaacatttatacacataaaaaaagactcaaaaccatataaaacttgaaccaaaac 22686760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23610272 - 23610354
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttatttta 82  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| | ||||| ||||||||    
T  23610272 ttgatccctaagtttgtctaaacatttatatacatcaaaagagactcaaagccatataaaacttgaccaaaaacattatttta 23610354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 25584233 - 25584161
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaac---aacatgttaaacccctttt 159  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  25584233 atcaattctacaaattaaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttt 25584161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28577835 - 28577932
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatat------acatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcat 91  Q
    ||||||| |||||||||||||||||||||||      ||||||||||||||||||| |||| |||| ||||| ||||||| |||||||||||||||||    
T  28577835 ttgatcccaaagtttgtctaaacatttatatacatatacatcaaaagagactcaaatccatataaaacttgacccaaaacattattttagaaaatcat 28577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 34491364 - 34491239
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca-------tgttaaacccctttttagaatcatacaacccattatt- 181  Q
    ||||||||||||||| |||||||| || |||||||||||||||| ||||||||||       |||||||||| |||| ||||| ||||||| | |||||     
T  34491364 atcaattttgcaatt-aaccctaaattttataacatcaaaacta-caaaacaacaacaaccatgttaaaccctttttcagaattatacaactcgttattt 34491267  T
Q  182 agagaaagctagtcccacccttaccttag 210  Q
    |||||| ||||||||||||||||||||||    
T  34491266 agagaa-gctagtcccacccttaccttag 34491239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 24516168 - 24516246
Alignment:
Q  139 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| |||||||||||||||||||||||||||    
T  24516168 acaacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatc 24516246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 36734515 - 36734444
Alignment:
Q  143 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgat 216  Q
    ||||||||||||  ||||||||| ||| ||||||||||||||||| | || |||||||||||||||||||||||    
T  36734515 catgttaaaccctattttagaattata-aacccattattagagaa-gttaatcccacccttaccttagattgat 36734444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 27852690 - 27852728
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  27852690 attagagaaagttagtcccacccttaccttagattgatc 27852728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 28652663 - 28652626
Alignment:
Q  100 caatttaaccctaatttctataacatcaaaactaacaa 137  Q
    |||| |||||||||||||||||||||||||||||||||    
T  28652663 caatctaaccctaatttctataacatcaaaactaacaa 28652626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 2523817 - 2523747
Alignment:
Q  139 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| |||||||||||||||||||    
T  2523817 acaacatgttaaactcaatttaagaattatacaacttagaattagagaaagttagtcccacccttacctta 2523747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 3539859 - 3539893
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||| |||||||||||||||||||||||    
T  3539859 attagagaaagttagtcccacccttaccttagatt 3539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 17307508 - 17307542
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||| |||||||||||||||||||||||    
T  17307508 attagagaaagttagtcccacccttaccttagatt 17307542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 22501993 - 22502027
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||| |||||||||||||||||||||||    
T  22501993 attagagaaagttagtcccacccttaccttagatt 22502027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 22509927 - 22509961
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||| |||||||||||||||||||||||    
T  22509927 attagagaaagttagtcccacccttaccttagatt 22509961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 25142226 - 25142260
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||||| |||||||||||||||||||||||    
T  25142226 attagagaaagttagtcccacccttaccttagatt 25142260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 357885 - 357934
Alignment:
Q  161 agaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    |||||||||||||  |  ||||||||||| ||||||||||||||||||||    
T  357885 agaatcatacaacttagaattagagaaagttagtcccacccttaccttag 357934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 90 - 213
Target Start/End: Complemental strand, 127465 - 127339
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||    
T  127465 atcaattttgcaaagtaaccctaatctctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaatccattattagaga 127366  T
Q  187 aagctagtcccacccttaccttagatt 213  Q
    |||||||||||||||||||||||||||    
T  127365 aagctagtcccacccttaccttagatt 127339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 127807 - 127722
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatttt 98  Q
    |||||||||||||| || |||| |||||  |||||||||||| |||| |||| |||||| | |||||||| |||||||||||||||    
T  127807 ttgtctaaacatttctaaacatgaaaaggcactcaaaaccatataaaacttggaccaaatcattattttacaaaatcatcaatttt 127722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 19789 - 19912
Alignment:
Q  92 caattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagagaaa 188  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  19789 caattttgcaatt-aaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaa 19887  T
Q  189 gctagtcccacccttaccttagatt 213  Q
     ||||||| ||||||||||||||||    
T  19888 tctagtcctacccttaccttagatt 19912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 5445 - 5510
Alignment:
Q  148 taaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||| |||| ||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttagatt 5510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 11603 - 11668
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    ||||||||||| |||| ||||| |||||||||||| |||||||||  |||||||||||||| ||||    
T  11603 atgttaaaccctttttcagaattatacaacccatttttagagaaatttagtcccacccttatctta 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 10881 - 10999
Alignment:
Q  92 caattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagagaaa 188  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||    
T  10881 caattttgcaatt-aaccctaatttctataacatcaaaactaacaaaacaacaacatgttaaaccc-tttttagaatcatacaacccattattagagaaa 10978  T
Q  189 gctagtcccacccttacctta 209  Q
    |||||| ||||||||||||||    
T  10979 gctagttccacccttacctta 10999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 75867 - 75993
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||| ||||||| ||| ||||||||  ||||||||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||||| ||||    
T  75867 atcaactttgcaaattatccctaattcttataacatcaaaactaataaaacaacaacatgttaaacccctttttagaatcatacaacccattattggaga 75966  T
Q  187 aagctagtcccacccttaccttagatt 213  Q
    |||||||||||||||||||||||||||    
T  75967 aagctagtcccacccttaccttagatt 75993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 73017 - 73139
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaaca---acatgttaaacccctttttagaatcatacaacccattattagaga 186  Q
    ||||| ||||||| ||||||||||||  |||||||| |||||||| ||||||   |||||||||||||||||||||||||||||||| ||||||||||||    
T  73017 atcaactttgcaaattaaccctaattcttataacataaaaactaataaaacaacaacatgttaaacccctttttagaatcatacaactcattattagaga 73116  T
Q  187 aagctagtcccacccttacctta 209  Q
    ||| |||||||||||||||||||    
T  73117 aagttagtcccacccttacctta 73139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 111347 - 111416
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  111347 atgttaaacccctttttagaatcatacaacccattattagagaaagctagccccacccttaccttagatt 111416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 66138 - 66070
Alignment:
Q  143 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaga 211  Q
    |||||||||||| |||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||    
T  66138 catgttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttaga 66070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 8854 - 8742
Alignment:
Q  104 ttaaccctaatttctataacatcaaaactaacaaaacaacat---gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 200  Q
    |||||||||||||||||||||||||||||||||||||||||    ||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  8854 ttaaccctaatttctataacatcaaaactaacaaaacaacaataggttcaacccctttttagaatcatacaacccattattagagtaagctagtctcacc 8755  T
Q  201 cttaccttagatt 213  Q
    |||||||||||||    
T  8754 cttaccttagatt 8742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 11267 - 11160
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaaaacaaca---tgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 201  Q
    |||||||||||| |||||||||||||||||||||||||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11267 taaccctaatttatataacatcaaaactaacaaaacaacaacatgataaacccctttttagaatcatacaacccattattagagaaagctagtcccatcc 11168  T
Q  202 ttacctta 209  Q
    ||||||||    
T  11167 ttacctta 11160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11602 - 11508
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||    
T  11602 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaa 11508  T

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Target: scaffold1186 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 1966 - 2080
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  1966 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 2065  T
Q  203 taccttagattgatc 217  Q
    |||||||||||||||    
T  2066 taccttagattgatc 2080  T

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Target: scaffold0878 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 3528 - 3418
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  3528 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccaccct 3429  T
Q  203 taccttagatt 213  Q
    |||||||||||    
T  3428 taccttagatt 3418  T

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Target: scaffold0878; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 3989 - 3927
Alignment:
Q  12 gtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 74  Q
    ||||||||||||||||||| ||||||||  |||||||||||||| ||||  ||||||||||||    
T  3989 gtttgtctaaacatttatacacatcaaataagactcaaaaccatataaaatttgaaccaaaac 3927  T

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Target: scaffold0005 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 186302 - 186188
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  186302 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 186203  T
Q  203 taccttagattgatc 217  Q
    |||||||||||||||    
T  186202 taccttagattgatc 186188  T

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Target: scaffold0134 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38558 - 38652
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  38558 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 38652  T

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Target: scaffold0023 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 95147 - 95241
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  95147 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 95241  T

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Target: scaffold0730 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 6590 - 6501
Alignment:
Q  124 atcaaaactaacaaaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || ||||||||||||    
T  6590 atcaaaattaacaaaacaacatgttaaaccccttttcagaatcatacaacccattattagagaaaggtagtcccgcctttaccttagatt 6501  T

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Target: scaffold0444 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14130 - 14226
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  14130 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 14226  T

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Target: scaffold0109 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 5534 - 5438
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||||    
T  5534 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatcaatt 5438  T

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Target: scaffold0109; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 231 - 135
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  ||||||||||||||||||||||    
T  231 ttgatcccaaagttcgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaatattattttagaaaatcatcaatt 135  T

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Target: scaffold0369 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 15721 - 15612
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  15721 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattagag-aagttagtcccaccct 15623  T
Q  203 taccttagatt 213  Q
    |||||||||||    
T  15622 taccttagatt 15612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16193 - 16120
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 74  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||    
T  16193 ttgatcccaaagtttgtctgaacatttatacacatcaaatgagactcaaaaccatataaaacttgaaccaaaac 16120  T

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Target: scaffold0048 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 68797 - 68719
Alignment:
Q  138 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgat 216  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  68797 aacaacatgttaaacccgtttttagaatcatataacccattattagagaaaggtagtcccacccttaccttagattgat 68719  T

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Target: scaffold0032 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 62292 - 62198
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||| ||||||||||||||    
T  62292 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattctagaaaatcatcaa 62198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 61957 - 61844
Alignment:
Q  105 taaccctaatttc----tataacatcaaaactaacaa-aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccac 199  Q
    |||||||||||||    |||||||||||||||||||| ||| ||| | | ||  |||||| ||||| |||||||  |  ||||||||||| ||||| |||    
T  61957 taaccctaatttctatatataacatcaaaactaacaacaactacaaggttaaatccttttcagaattatacaacttagaattagagaaagttagtctcac 61858  T
Q  200 ccttaccttagatt 213  Q
    ||||||||||||||    
T  61857 ccttaccttagatt 61844  T

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Target: scaffold0029 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 12034 - 12120
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  12034 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattttagaaaatcatcaa 12120  T

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Target: scaffold0546 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7773 - 7869
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||| ||||||| ||||||||||||||||||||||    
T  7773 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaacaaataaaacttgacccaaaacattattttagaaaatcatcaatt 7869  T

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Target: scaffold0254 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 21495 - 21583
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||| ||||||||||||||||    
T  21495 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaacattattatagaaaatcatcaatt 21583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 2831 - 2937
Alignment:
Q  109 cctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacc 206  Q
    ||||||| |||||||||| |||||||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2831 cctaattcctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacc 2930  T
Q  207 ttagatt 213  Q
    |||||||    
T  2931 ttagatt 2937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 2762 - 2824
Alignment:
Q  106 aaccctaatttctataacatcaaaactaacaaa---acaacatgttaaacccctttttagaat 165  Q
    ||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||||    
T  2762 aaccctaatttctataacatcaaaagtaacaaaacgacaacatgttaaacccctttttagaat 2824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4066 - 4160
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||||||||||    
T  4066 ttgatcccagagtttgtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgacccaaaacattattttagaaaatcatcaa 4160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 17627 - 17513
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    |||||||||||||||||||| |||||||||||| ||| ||| | |||||||| |||| ||||| |||||| ||||||||||| ||||||||||| |||||    
T  17627 taaccctaatttctataacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgaccct 17528  T
Q  203 taccttagattgatc 217  Q
    |||||||||||||||    
T  17527 taccttagattgatc 17513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 11876 - 11811
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac 74  Q
    ||||||||||||||| |||||| |||| |||||  ||||||| |||| |||| ||||||| |||||    
T  11876 aaagtttgtctaaacgtttataaacataaaaaggcactcaaatccatataaaacttgaactaaaac 11811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18381 - 18287
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaacc-aaaacttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || |||| ||||| ||||||||||||||    
T  18381 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgacccaaaaaattattctagaaaatcatcaa 18287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 18046 - 17936
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    ||||||||||||||||||||||||||||||||| ||| || | |||||| || |||| ||||| |||||||  |  ||||||||||| ||||||||||||    
T  18046 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtcccaccct 17947  T
Q  203 taccttagatt 213  Q
    |||||||||||    
T  17946 taccttagatt 17936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 22825 - 22919
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||  ||||||||||||||||||||    
T  22825 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaaattgacccaaaatattattttagaaaatcatcaa 22919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 39164 - 39070
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||||  ||||||||||||||||||||    
T  39164 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatataaaactttacccaaaatattattttagaaaatcatcaa 39070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 62538 - 62612
Alignment:
Q  23 catttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||| ||||||| | |||| |||||||||||| |||| ||||| ||||||  |||||||||||||||| |||||    
T  62538 catttctatacatgataagacactcaaaaccatataaaacttgacccaaaatattattttagaaaatcaccaatt 62612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 8861 - 8957
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  |||||||||||||||| |||||    
T  8861 ttgatcccaaagtttatctaaacatttatatacatcaaaagagactcaaaaccatttaaaacttgacccaaaagattattttagaaaatcaccaatt 8957  T

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Target: scaffold0044 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41136 - 41232
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||| ||||    
T  41136 ttgatcccaaagtttgtctaaacatttatataaatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcattaatt 41232  T

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Target: scaffold0056 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 18221 - 18328
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    |||||||||||||||||| |||||||| ||||| ||| ||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  18221 taaccctaatttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcacaccct 18320  T
Q  203 taccttag 210  Q
    ||||||||    
T  18321 taccttag 18328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 67143 - 67181
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  67143 attagagaaagttagtcccacctttaccttagattgatc 67181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6681 - 6775
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||| ||||||  ||||||||||||||||||||    
T  6681 ttgatcccaaagtttgtctaaacatttgtatacatcaaaagagactcaaaatcatataaaacttgacccaaaatattattttagaaaatcatcaa 6775  T

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Target: scaffold0040 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 13245 - 13151
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| ||||  |||| ||||||| ||||||||||||||||||||    
T  13245 ttgatcccaaagtttgtctaaacatttatatacatcaaaagagactagaaaccatataaaatttgacccaaaacattattttagaaaatcatcaa 13151  T

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Target: scaffold0040; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 106098 - 106043
Alignment:
Q  162 gaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||||  |  ||||||||||| ||||| |||||||||||||||||||||    
T  106098 gaatcatacaacttagaattagagaaagttagtcacacccttaccttagattgatc 106043  T

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Target: scaffold0247 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 1008 - 1128
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaa-caacatg-ttaaacccctttttagaatcatacaacccattattagagaa 187  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||| | | ||| | |||||||| |||| ||||| |||||| ||||||||||||||    
T  1008 atcaattttgcaatt-aaccataatttctaaaacatcaaaactaacaacatctacaaggttaaaccctttttcagaattatacaatccattattagagaa 1106  T
Q  188 agctagtcccacccttacctta 209  Q
    |||||||| |||||||||||||    
T  1107 agctagtctcacccttacctta 1128  T

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Target: scaffold0230 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 14702 - 14782
Alignment:
Q  17 tctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  14702 tctaaacatttatatacatcaaaagagactcaaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 14782  T

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Target: scaffold0028 (Bit Score: 57; Significance: 6e-24; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 134961 - 135045
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  134961 tttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 135045  T

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Target: scaffold0028; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 137430 - 137514
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  137430 tttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 137514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 139899 - 139983
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  139899 tttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 139983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 142368 - 142452
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  142368 tttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 142452  T

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Target: scaffold0028; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 144837 - 144921
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||| ||||||||||||||||||||||    
T  144837 tttgtctaaacatttatatacatcaaaagagactcgaaaccatataaaacttgaccaaaaacattattttagaaaatcatcaatt 144921  T

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Target: scaffold0086 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 35252 - 35181
Alignment:
Q  143 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    |||||||||||| |||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  35252 catgttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttaccttagattg 35181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 2234 - 2304
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  2234 atgttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttagattg 2304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 8792 - 8900
Alignment:
Q  109 cctaatttctataacatcaaaactaacaaaacaaca---tgttaaaccccttttt-agaatcatacaacccattattagagaaagctagtcccaccctta 204  Q
    ||||||||||  || ||||||| |||||||||||||   ||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  8792 cctaatttctcaaaaatcaaaattaacaaaacaacaacatgttaaacccccttttcagaatcatacaatccattattagataaagctagtcccaccctta 8891  T
Q  205 ccttagatt 213  Q
     ||||||||    
T  8892 acttagatt 8900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 2562 - 2454
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaaa-acaacatg-ttaaaccccttttt--agaatcatacaacccattattagagaaagctagtcccacc 200  Q
    |||||||||||||||||||||||||||||| ||  || ||| | |||||||  |||||  ||||| ||||||||||||||||||||||||||||||||||    
T  2562 taaccctaatttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtcccacc 2463  T
Q  201 cttacctta 209  Q
    |||||||||    
T  2462 cttacctta 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 53; Significance: 1e-21; HSPs: 3)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6214 - 6310
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    ||||||| |||||||||| |||||||||||||||||||||||| || |||||||| |||| ||||| ||||||| ||||||||||| |||| |||||    
T  6214 ttgatcccaaagtttgtcaaaacatttatatacatcaaaagagtctgaaaaccatataaaacttgatccaaaacattattttagaatatcaccaatt 6310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7038 - 6987
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaac 52  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  7038 ttgatcccaaagtttgtctaaccatttacatacatcaaaagagactcaaaac 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 6408 - 6477
Alignment:
Q  147 ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgat 216  Q
    |||| ||| |||| ||||| | ||||| |||||||||||||||||||||  |||||||||||||||||||    
T  6408 ttaatccctttttcagaattacacaactcattattagagaaagctagtcttacccttaccttagattgat 6477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 13938 - 14005
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    ||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  13938 gttaaaccctttttcagaattttacaacccattattagagaaagctagtcccacccttaccttagatt 14005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 14689 - 14582
Alignment:
Q  109 cctaatttctataa-catcaaaactaacaa-aacaacatgttaaaccccttttt-agaatcatacaacccattattagagaaagctagtcccacccttac 205  Q
    |||||||||| ||| ||||||||||||||| ||| |||  || || |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  14689 cctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttac 14590  T
Q  206 cttagatt 213  Q
    ||||||||    
T  14589 cttagatt 14582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 23747 - 23640
Alignment:
Q  109 cctaatttctataa-catcaaaactaacaa-aacaacatgttaaaccccttttt-agaatcatacaacccattattagagaaagctagtcccacccttac 205  Q
    |||||||||| ||| ||||||||||||||| ||| |||  || || |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  23747 cctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttac 23648  T
Q  206 cttagatt 213  Q
    ||||||||    
T  23647 cttagatt 23640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5581 - 5488
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaa 94  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||| |||| |||||  |||||| ||||| ||||||||||||||    
T  5581 ttgatcccaaagtt-gtctaaacatttatatacatcaaaagagactcaaaatcatataaaacttgactcaaaacattattctagaaaatcatcaa 5488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 12241 - 12333
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaa---caacatgttaaacccctttttagaatcatacaacccatta 179  Q
    ||||||| | ||| |||||| |||||||||||||||||||||||||||||   ||||||||||||| | ||||||||||||||||||| ||||    
T  12241 atcaattctacaaattaaccttaatttctataacatcaaaactaacaaaacttcaacatgttaaactcatttttagaatcatacaacctatta 12333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 4232 - 4305
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaa 86  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| ||||  |||||||||||| ||||||||||||    
T  4232 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaaattgaaccaaaacattattttagaaa 4305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 4877 - 4988
Alignment:
Q  100 caatttaaccctaatttctataacatcaaaactaacaa-aacaacat--gttaaacccctttttagaatcatacaacccattattagagaaagctagtcc 196  Q
    |||| ||||||||||  ||||||||||||||||||||| ||| |||   ||||||||| |||  ||||| |||||||| |||||||||||||||||||||    
T  4877 caatctaaccctaatcactataacatcaaaactaacaacaactacaaaggttaaacccttttacagaattatacaacc-attattagagaaagctagtcc 4975  T
Q  197 cacccttacctta 209  Q
    |||||||||||||    
T  4976 cacccttacctta 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 23527 - 23587
Alignment:
Q  150 aacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  23527 aacccctttttagatttatacaacccattattagagaaagctagtcctacccttaccttag 23587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 40268 - 40156
Alignment:
Q  106 aaccctaatttctataacatcaaaactaacaa-aacaacat-gttaaacccctttttagaatca-taca-acccattattagagaaagctagtcccaccc 201  Q
    |||||||| ||||||||||||||||||| ||| ||| |||| ||||||||| |||||||||| | || | || ||| ||||||||| | |||||||||||    
T  40268 aaccctaacttctataacatcaaaactatcaacaactacatggttaaacccttttttagaattattatatactcatgattagagaaggttagtcccaccc 40169  T
Q  202 ttaccttagattg 214  Q
    |||||||||||||    
T  40168 ttaccttagattg 40156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7875 - 7804
Alignment:
Q  1 ttgatccaaaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaa 72  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| |||| | |||||||||    
T  7875 ttgatcccaaagtttgtttaaacatttatatacatcaaaagagattcaaaaccatataaaacatgaaccaaa 7804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 5411 - 5304
Alignment:
Q  105 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 202  Q
    |||||||||| |||||||||||||||| ||||| ||| ||| | |||||||| |||| ||||| |||||||  |  ||||||||||| ||||||||||||    
T  5411 taaccctaatatctataacatcaaaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtcccaccct 5312  T
Q  203 taccttag 210  Q
    ||||||||    
T  5311 taccttag 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 5620 - 5685
Alignment:
Q  146 gttaaaccccttttt--agaatcatacaacccattattagagaaagctagtcccacccttacctta 209  Q
    ||||||||| |||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5620 gttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 5441 - 5524
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| || |||| | |||| |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||||    
T  5441 ttgtctaaccatttctacacatgataagacactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaatt 5524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 26668 - 26786
Alignment:
Q  100 caatttaaccctaatttctataacatcaaaactaacaa-aacaacat-gttaaacccctttttagaatcatacaacccattattagagaaagctagtccc 197  Q
    |||| |||||||||| |||||||||||||| ||||||| ||| |||  ||||||||| |||| ||||| |||||||| |  ||||||||||| || ||||    
T  26668 caatctaaccctaatctctataacatcaaagctaacaacaactacaaagttaaaccctttttcagaattatacaacctaaaattagagaaagttaatccc 26767  T
Q  198 acccttaccttagattgat 216  Q
    ||||||||| |||||||||    
T  26768 acccttaccgtagattgat 26786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 216
Target Start/End: Complemental strand, 16526 - 16412
Alignment:
Q  105 taaccctaatttctataa-catcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 201  Q
    |||||||||||||| ||| ||||||| ||||||| ||| ||| | |||||||| |||| ||||| |||||||||||||||||| |||| || || |||||    
T  16526 taaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatctcaccc 16427  T
Q  202 ttaccttagattgat 216  Q
    |||||||||||||||    
T  16426 ttaccttagattgat 16412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 18754 - 18696
Alignment:
Q  156 tttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    |||| ||||| ||||||| ||||||||||||||| || ||||||||| |||||||||||    
T  18754 ttttaagaattatacaactcattattagagaaagttaatcccaccctcaccttagattg 18696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 338 - 415
Alignment:
Q  20 aaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||| |||||| |||||||||||||||||||||| ||||  |||| | ||||| ||||||||||||||||||||||    
T  338 aaacatgtatatagatcaaaagagactcaaaaccatataaaatttgaccaaaaacattattttagaaaatcatcaatt 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 10001 - 10078
Alignment:
Q  20 aaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaatt 96  Q
    |||||| |||||| |||||||||||||||||||||| |||| ||||| | ||||  ||||||||||||||||||||||    
T  10001 aaacatgtatatagatcaaaagagactcaaaaccatataaaacttgaccaaaaatattattttagaaaatcatcaatt 10078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 18681 - 18636
Alignment:
Q  168 tacaacccattattagagaaagctagtcccacccttaccttagatt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  18681 tacaactcattattagagaaagctagtcccacccttaccttagatt 18636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 19154 - 19263
Alignment:
Q  106 aaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 203  Q
    |||||| |||||||||||||||||||||| || ||| ||| | |||||||| |||| ||||| |||||||  |  ||||||||||| |||||||||||||    
T  19154 aacccttatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccctt 19253  T
Q  204 accttagatt 213  Q
    || |||||||    
T  19254 acgttagatt 19263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 24310 - 24227
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaa-cttattttagaaaatcatcaa 94  Q
    ||||||||||||||||||||||||||||||||||||   |||||| | |||| ||||| ||||||  || |||||||||||||||||    
T  24310 aaagtttgtctaaacatttatatacatcaaaagaga---aaaaccttataaaacttgacccaaaatattgttttagaaaatcatcaa 24227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 134
Target Start/End: Complemental strand, 23988 - 23959
Alignment:
Q  105 taaccctaatttctataacatcaaaactaa 134  Q
    ||||||||||||||||||||||||||||||    
T  23988 taaccctaatttctataacatcaaaactaa 23959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 23925 - 23893
Alignment:
Q  176 attattagagaaagctagtcccacccttacctt 208  Q
    |||||||||||||||||||| ||||||||||||    
T  23925 attattagagaaagctagtctcacccttacctt 23893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 12417 - 12464
Alignment:
Q  90 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaa 137  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  12417 atcaattttgcaaataaaccctaatttctataacatcaaaactaacaa 12464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 21616 - 21671
Alignment:
Q  162 gaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||||  |  |||||||||||||||||||||||||||||||||||||||    
T  21616 gaatcatacaacttagaattagagaaagctagtcccacccttaccttagattgatc 21671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 29603 - 29565
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  29603 attatagaaagttagtcccacccttaccttagattgatc 29565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 43851 - 43782
Alignment:
Q  143 catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||||||  ||| ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  43851 catgttaaaccctatttcagaattata-aacccattattagagaa-gctagtcccacccttaccttagattg 43782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 39132 - 39090
Alignment:
Q  171 aacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  39132 aacccattattagagaa-gctagtcccacccttaccttagattg 39090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 120 - 198
Alignment:
Q  139 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattgatc 217  Q
    |||||||||||||| |  ||| ||||| |||||||  |  ||||||||||| |||||||||||||||||||||||||||    
T  120 acaacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatc 198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 5653 - 5609
Alignment:
Q  171 aacccattattagagaaagctagtcccacccttaccttagattgat 216  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  5653 aacccattattagagaa-gctagtcccacccttaccttagattgat 5609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 10687 - 10604
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||| |||||||||||| || | ||||| ||||||| |||||||||||||||| |||||    
T  10687 ttgtctaaccatttctatacatgataagacactcaaaaccatatacaacttgacccaaaacattattttagaaaatcaccaatt 10604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 96380 - 96455
Alignment:
Q  139 acaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||| ||||||| || |||| ||||||||||||| ||  ||||||||||| |||||||||| |||| ||||||||    
T  96380 acaacttgttaaatccattttcagaatcatacaactcagaattagagaaagttagtcccacctttactttagattg 96455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 4739 - 4701
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  4739 attagagaaagttagtcccacccttaccttagattgatc 4701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 372 - 426
Alignment:
Q  144 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 198  Q
    ||||||||||| |||| ||||| |||||||||||  |||||||||||||||||||    
T  372 atgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 13422 - 13384
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  13422 attagagaaagttagtcccacccttaccttagattgatc 13384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 490 - 578
Alignment:
Q  9 aaagtttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaacc-aaaacttattttagaaaatcatcaatt 96  Q
    |||| |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| || |||| |||||||||||||||| |||||    
T  490 aaagattgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaaaattattttagaaaatcaccaatt 578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 2870 - 2946
Alignment:
Q  138 aacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattg 214  Q
    ||||||||| ||||| |  ||| ||||| |||||||| |  ||||||||||| || |||||||||||||||||||||    
T  2870 aacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttagattg 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 14892 - 14940
Alignment:
Q  96 tttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca 144  Q
    ||||||||| || ||||| |||||||||||||||||||||||| |||||    
T  14892 tttgcaattcaaacctaacttctataacatcaaaactaacaaagcaaca 14940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 16912 - 16960
Alignment:
Q  96 tttgcaatttaaccctaatttctataacatcaaaactaacaaaacaaca 144  Q
    ||||||||| || ||||| |||||||||||||||||||||||| |||||    
T  16912 tttgcaattcaaacctaacttctataacatcaaaactaacaaagcaaca 16960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 3143 - 3261
Alignment:
Q  97 ttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagt 194  Q
    ||||||||||| ||||| ||||||||||||||||||| ||| ||| || |  |||||||| |||| | ||| |||  || ||| |||| |||| | ||||    
T  3143 ttgcaatttaaacctaacttctataacatcaaaactatcaacaactacaaaattaaaccctttttcataattata-tactcatgattaaagaaggttagt 3241  T
Q  195 cccacccttaccttagattg 214  Q
    ||||||||||||||||||||    
T  3242 cccacccttaccttagattg 3261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 59769 - 59651
Alignment:
Q  97 ttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagt 194  Q
    ||||||| ||| |||||||||||||| |||||||||| ||| ||| || | ||||||||| |||| ||||| |||  || ||| |||| |||| | |||     
T  59769 ttgcaatataaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctttttcagaattata-tactcatgattaaagaaggttaga 59671  T
Q  195 cccacccttaccttagattg 214  Q
    ||||||||||||||||||||    
T  59670 cccacccttaccttagattg 59651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 10169 - 10086
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatcatcaatt 96  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| |||||||||||| ||| |||||    
T  10169 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaattcaccaatt 10086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 540 - 578
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  540 attagagaaagttagtctcacccttaccttagattgatc 578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 19369 - 19447
Alignment:
Q  13 tttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaaatca 90  Q
    |||||||||||||||||| |||| |||||  |||||||||||| |||  ||||| ||||||| ||| |||| |||||||    
T  19369 tttgtctaaacatttataaacatgaaaaggcactcaaaaccatataacacttgacccaaaacattaatttacaaaatca 19447  T

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Target: scaffold0241 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 3204 - 3242
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  3204 attagagaaagttagtccaacccttaccttagattgatc 3242  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 35512 - 35550
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  35512 attagagaaagttagtctcacccttaccttagattgatc 35550  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 112996 - 112958
Alignment:
Q  179 attagagaaagctagtcccacccttaccttagattgatc 217  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  112996 attagagaaagttagtcccacccttatcttagattgatc 112958  T

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Target: scaffold0401 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 8632 - 8705
Alignment:
Q  14 ttgtctaaacatttatatacatcaaaagagactcaaaaccatgtaaaccttgaaccaaaac-ttattttagaaa 86  Q
    |||||||| ||||| ||||||| | |||  |||||||||||| |||| ||||| ||||||| ||||||||||||    
T  8632 ttgtctaaccatttctatacatgataaggcactcaaaaccatataaaacttgacccaaaacattattttagaaa 8705  T

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Target: scaffold1256 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 2263 - 2199
Alignment:
Q  146 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 210  Q
    ||||||||| |||| ||||| |||||||  |  ||||||||||  ||||||||||||||||||||    
T  2263 gttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttag 2199  T

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