View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7251_high_2 (Length: 204)
Name: NF7251_high_2
Description: NF7251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7251_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 35125927 - 35126095
Alignment:
| Q |
18 |
aaatggtcttatatccagaactacacctatcatcgggatgctgtcacactcaaattagcaacgactttagtagaataacatctcaactagttctgatagg |
117 |
Q |
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| T |
35125927 |
aaatggtcttatatccagaactacacctatcaacgggatgctgtcacattcaaattagcaacgactttggtagaataacatctcaactagttctgatagg |
35126026 |
T |
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| Q |
118 |
atttctcaataatgaatctttttatagagacaacatcgacaaatttactattcccaactacatataaga |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35126027 |
atttctcaataatgaatctttttatagagacaacatcgacaaatttactattcccaactacatataaga |
35126095 |
T |
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