View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7255_low_2 (Length: 469)

Name: NF7255_low_2
Description: NF7255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7255_low_2
NF7255_low_2
[»] chr4 (59 HSPs)
chr4 (22-313)||(26673988-26674283)
chr4 (380-469)||(26674350-26674439)
chr4 (397-469)||(31521977-31522049)
chr4 (389-469)||(24825636-24825716)
chr4 (380-469)||(26742517-26742606)
chr4 (397-469)||(7060319-7060391)
chr4 (397-469)||(13965555-13965627)
chr4 (397-469)||(38944201-38944273)
chr4 (397-469)||(43244435-43244507)
chr4 (397-468)||(394329-394400)
chr4 (389-469)||(51152112-51152192)
chr4 (397-469)||(7083870-7083942)
chr4 (397-469)||(11210367-11210439)
chr4 (397-469)||(22757089-22757161)
chr4 (389-469)||(24100126-24100206)
chr4 (397-469)||(8712525-8712597)
chr4 (397-469)||(29268831-29268903)
chr4 (397-469)||(44757096-44757168)
chr4 (399-469)||(24568767-24568837)
chr4 (399-469)||(25658164-25658234)
chr4 (384-469)||(29922816-29922904)
chr4 (384-469)||(5814329-5814414)
chr4 (396-469)||(7861259-7861332)
chr4 (416-469)||(43493341-43493394)
chr4 (389-469)||(478066-478145)
chr4 (397-469)||(6911675-6911747)
chr4 (389-469)||(24611853-24611933)
chr4 (397-469)||(30202033-30202105)
chr4 (399-469)||(50801214-50801284)
chr4 (389-469)||(19745376-19745456)
chr4 (389-469)||(19794350-19794430)
chr4 (397-465)||(20399961-20400029)
chr4 (254-310)||(32223232-32223288)
chr4 (254-310)||(48338451-48338507)
chr4 (397-463)||(27394825-27394891)
chr4 (254-308)||(48293329-48293383)
chr4 (404-469)||(6881958-6882023)
chr4 (411-464)||(22049464-22049517)
chr4 (397-469)||(39837589-39837662)
chr4 (254-310)||(18536555-18536611)
chr4 (388-468)||(20887810-20887890)
chr4 (399-462)||(626609-626671)
chr4 (422-469)||(13586295-13586342)
chr4 (411-469)||(2447809-2447867)
chr4 (399-469)||(36124401-36124471)
chr4 (426-468)||(39523433-39523475)
chr4 (397-469)||(45351124-45351198)
chr4 (397-469)||(45360603-45360677)
chr4 (397-469)||(7084201-7084273)
chr4 (384-455)||(28837059-28837128)
chr4 (380-440)||(29235350-29235409)
chr4 (254-310)||(51907177-51907233)
chr4 (428-463)||(3159068-3159103)
chr4 (254-299)||(5122310-5122355)
chr4 (254-299)||(11031559-11031604)
chr4 (254-310)||(6101993-6102049)
chr4 (161-233)||(29232770-29232842)
chr4 (255-298)||(29700833-29700877)
chr4 (254-310)||(49640951-49641007)
[»] chr5 (42 HSPs)
chr5 (380-469)||(27241042-27241131)
chr5 (397-468)||(17699548-17699619)
chr5 (397-469)||(17331323-17331395)
chr5 (397-469)||(28040624-28040696)
chr5 (384-469)||(42609126-42609211)
chr5 (389-469)||(33164522-33164602)
chr5 (389-469)||(981079-981159)
chr5 (389-469)||(6281031-6281111)
chr5 (398-469)||(6635245-6635317)
chr5 (397-469)||(29097784-29097856)
chr5 (397-469)||(43493867-43493939)
chr5 (389-469)||(20483173-20483253)
chr5 (397-469)||(32347768-32347841)
chr5 (397-469)||(34431055-34431127)
chr5 (384-463)||(26295118-26295197)
chr5 (399-465)||(12439692-12439757)
chr5 (384-469)||(178160-178245)
chr5 (397-469)||(17096293-17096368)
chr5 (412-469)||(39179882-39179939)
chr5 (415-469)||(3079359-3079413)
chr5 (380-469)||(39531457-39531544)
chr5 (256-308)||(2422911-2422963)
chr5 (254-310)||(2589082-2589138)
chr5 (397-441)||(7771888-7771932)
chr5 (399-469)||(3740355-3740424)
chr5 (411-469)||(17687214-17687272)
chr5 (254-308)||(27571959-27572013)
chr5 (385-469)||(42396566-42396651)
chr5 (254-310)||(18432195-18432251)
chr5 (397-469)||(23882170-23882242)
chr5 (254-297)||(733957-734000)
chr5 (121-170)||(2588957-2589006)
chr5 (428-469)||(6681928-6681969)
chr5 (254-299)||(11402704-11402749)
chr5 (432-469)||(12891706-12891743)
chr5 (254-299)||(18845623-18845668)
chr5 (266-310)||(691474-691518)
chr5 (266-310)||(6633441-6633485)
chr5 (266-310)||(12378949-12378993)
chr5 (412-464)||(18653792-18653844)
chr5 (254-298)||(36760221-36760264)
chr5 (412-464)||(39915567-39915618)
[»] chr2 (43 HSPs)
chr2 (380-469)||(27095683-27095772)
chr2 (380-469)||(44942263-44942352)
chr2 (397-467)||(43474184-43474254)
chr2 (397-469)||(11937912-11937985)
chr2 (384-469)||(25067834-25067919)
chr2 (397-469)||(9978723-9978795)
chr2 (397-469)||(12704682-12704754)
chr2 (397-469)||(15919869-15919941)
chr2 (389-469)||(17268178-17268258)
chr2 (397-469)||(34416815-34416887)
chr2 (389-469)||(35333492-35333572)
chr2 (400-465)||(13740718-13740783)
chr2 (397-469)||(5754283-5754355)
chr2 (397-469)||(9690027-9690099)
chr2 (397-469)||(20561186-20561258)
chr2 (397-469)||(22597130-22597202)
chr2 (397-469)||(33012072-33012144)
chr2 (397-469)||(38535359-38535431)
chr2 (397-469)||(18089446-18089518)
chr2 (397-468)||(34963121-34963191)
chr2 (254-311)||(27301400-27301457)
chr2 (254-310)||(6946467-6946523)
chr2 (397-469)||(10287060-10287131)
chr2 (397-469)||(31908870-31908942)
chr2 (397-469)||(36868003-36868075)
chr2 (256-303)||(31720002-31720049)
chr2 (397-469)||(32015215-32015291)
chr2 (397-469)||(34470959-34471033)
chr2 (397-468)||(38384497-38384568)
chr2 (399-469)||(4426712-4426782)
chr2 (380-450)||(28261966-28262036)
chr2 (412-469)||(28231151-28231208)
chr2 (254-310)||(1331115-1331170)
chr2 (397-469)||(4604361-4604433)
chr2 (411-469)||(4739338-4739396)
chr2 (397-467)||(7073004-7073074)
chr2 (258-299)||(28790620-28790661)
chr2 (433-469)||(4732102-4732138)
chr2 (389-464)||(11798576-11798650)
chr2 (434-469)||(13879060-13879095)
chr2 (434-469)||(14019185-14019220)
chr2 (426-469)||(32314466-32314509)
chr2 (256-309)||(22014078-22014131)
[»] chr7 (47 HSPs)
chr7 (389-469)||(42603823-42603903)
chr7 (397-469)||(9785312-9785384)
chr7 (397-469)||(17473777-17473849)
chr7 (397-469)||(17579365-17579437)
chr7 (389-469)||(11833005-11833086)
chr7 (380-469)||(28664966-28665055)
chr7 (397-469)||(45457610-45457682)
chr7 (397-469)||(5684360-5684432)
chr7 (397-469)||(5709410-5709482)
chr7 (397-469)||(21603458-21603529)
chr7 (397-469)||(22747562-22747633)
chr7 (397-469)||(36579366-36579438)
chr7 (397-469)||(39533029-39533101)
chr7 (397-469)||(21990656-21990729)
chr7 (397-469)||(32740747-32740820)
chr7 (397-465)||(2622587-2622655)
chr7 (397-469)||(17509258-17509329)
chr7 (397-469)||(17543885-17543956)
chr7 (389-469)||(42644663-42644743)
chr7 (397-469)||(45482059-45482131)
chr7 (397-469)||(46026083-46026155)
chr7 (397-465)||(48304453-48304521)
chr7 (400-469)||(1281191-1281260)
chr7 (384-465)||(4621425-4621506)
chr7 (397-469)||(6667390-6667463)
chr7 (380-469)||(10574359-10574448)
chr7 (385-469)||(24320277-24320361)
chr7 (397-469)||(27535451-27535523)
chr7 (415-469)||(43847083-43847137)
chr7 (254-303)||(29628212-29628261)
chr7 (422-469)||(9720028-9720075)
chr7 (426-469)||(10094465-10094508)
chr7 (426-469)||(15674666-15674709)
chr7 (256-310)||(27215111-27215165)
chr7 (254-310)||(6880017-6880073)
chr7 (429-469)||(14657877-14657917)
chr7 (389-465)||(37376095-37376170)
chr7 (254-310)||(43202541-43202597)
chr7 (434-469)||(3266420-3266455)
chr7 (254-297)||(41459281-41459324)
chr7 (133-195)||(2308146-2308207)
chr7 (397-439)||(40761584-40761626)
chr7 (431-469)||(41287987-41288025)
chr7 (257-310)||(26215023-26215076)
chr7 (254-310)||(30079505-30079561)
chr7 (266-310)||(40848978-40849022)
chr7 (90-165)||(43908626-43908702)
[»] scaffold0056 (1 HSPs)
scaffold0056 (396-469)||(74158-74231)
[»] chr1 (35 HSPs)
chr1 (384-469)||(42490875-42490960)
chr1 (397-469)||(424345-424417)
chr1 (397-469)||(7995614-7995686)
chr1 (397-469)||(32784103-32784175)
chr1 (380-469)||(3232766-3232855)
chr1 (397-469)||(28678184-28678256)
chr1 (397-465)||(29205280-29205348)
chr1 (397-465)||(33487088-33487156)
chr1 (397-469)||(27534694-27534766)
chr1 (397-469)||(37822399-37822471)
chr1 (380-469)||(14265262-14265351)
chr1 (380-469)||(20411551-20411640)
chr1 (397-469)||(4882413-4882485)
chr1 (397-469)||(12871616-12871688)
chr1 (389-469)||(18343601-18343681)
chr1 (411-469)||(42276365-42276423)
chr1 (412-469)||(44517157-44517214)
chr1 (389-469)||(4871080-4871160)
chr1 (397-468)||(17347594-17347664)
chr1 (256-303)||(17651868-17651915)
chr1 (400-469)||(13488590-13488659)
chr1 (254-303)||(35980201-35980250)
chr1 (384-464)||(33125865-33125944)
chr1 (431-469)||(45193680-45193718)
chr1 (254-303)||(15880074-15880123)
chr1 (254-303)||(35992524-35992573)
chr1 (389-457)||(15791554-15791622)
chr1 (254-310)||(17989162-17989218)
chr1 (254-310)||(47984417-47984473)
chr1 (410-469)||(10627008-10627067)
chr1 (397-443)||(33939082-33939128)
chr1 (254-299)||(32910296-32910341)
chr1 (428-469)||(51418040-51418080)
chr1 (429-469)||(29726650-29726690)
chr1 (397-469)||(45750473-45750545)
[»] scaffold0312 (1 HSPs)
scaffold0312 (397-469)||(6132-6204)
[»] chr8 (35 HSPs)
chr8 (389-469)||(41361719-41361799)
chr8 (380-469)||(31202436-31202525)
chr8 (397-469)||(10338884-10338956)
chr8 (397-469)||(37612648-37612720)
chr8 (389-468)||(2025272-2025351)
chr8 (401-469)||(30026942-30027010)
chr8 (397-469)||(31407810-31407882)
chr8 (397-469)||(39067751-39067823)
chr8 (399-469)||(2234532-2234602)
chr8 (254-310)||(6617037-6617093)
chr8 (389-469)||(24791230-24791310)
chr8 (397-468)||(11161877-11161948)
chr8 (399-469)||(23971156-23971226)
chr8 (397-469)||(9501584-9501657)
chr8 (397-469)||(10147941-10148014)
chr8 (384-469)||(14600760-14600845)
chr8 (397-469)||(1039955-1040027)
chr8 (254-310)||(6591342-6591398)
chr8 (397-469)||(12329621-12329693)
chr8 (397-469)||(13570788-13570860)
chr8 (397-468)||(1810283-1810353)
chr8 (428-469)||(31308174-31308215)
chr8 (417-469)||(37128548-37128600)
chr8 (428-469)||(4757191-4757232)
chr8 (397-469)||(3204818-3204889)
chr8 (389-444)||(7583851-7583906)
chr8 (389-464)||(30039399-30039473)
chr8 (389-450)||(13576257-13576317)
chr8 (254-298)||(3129493-3129537)
chr8 (256-296)||(7428370-7428410)
chr8 (172-236)||(12193448-12193512)
chr8 (172-236)||(12437876-12437940)
chr8 (410-466)||(15288863-15288919)
chr8 (410-466)||(15469232-15469288)
chr8 (266-310)||(38926347-38926391)
[»] chr6 (24 HSPs)
chr6 (389-469)||(12481424-12481504)
chr6 (397-469)||(21507862-21507934)
chr6 (397-469)||(14783225-14783297)
chr6 (397-469)||(15590133-15590205)
chr6 (397-469)||(6419912-6419984)
chr6 (401-469)||(31937473-31937540)
chr6 (389-455)||(29927447-29927513)
chr6 (397-469)||(8693711-8693786)
chr6 (384-469)||(23654232-23654317)
chr6 (389-469)||(2304864-2304944)
chr6 (254-308)||(19135026-19135080)
chr6 (254-299)||(4562966-4563011)
chr6 (401-469)||(19402862-19402930)
chr6 (254-298)||(30752646-30752690)
chr6 (397-469)||(35219958-35220029)
chr6 (397-469)||(4921935-4922008)
chr6 (397-446)||(4085013-4085062)
chr6 (258-310)||(8064604-8064656)
chr6 (410-469)||(4393778-4393837)
chr6 (430-469)||(23638172-23638211)
chr6 (254-303)||(7676274-7676323)
chr6 (254-310)||(892252-892308)
chr6 (266-310)||(12108479-12108523)
chr6 (254-298)||(14564543-14564587)
[»] chr3 (37 HSPs)
chr3 (397-469)||(14585457-14585529)
chr3 (397-469)||(49628149-49628221)
chr3 (380-469)||(31270304-31270393)
chr3 (389-469)||(3456930-3457010)
chr3 (397-469)||(11819078-11819150)
chr3 (397-469)||(36691861-36691933)
chr3 (380-469)||(32080816-32080905)
chr3 (389-469)||(4206573-4206653)
chr3 (397-469)||(13702034-13702106)
chr3 (397-469)||(30156344-30156415)
chr3 (397-469)||(31462808-31462880)
chr3 (397-469)||(34960920-34960992)
chr3 (397-469)||(35174699-35174771)
chr3 (389-469)||(38527250-38527330)
chr3 (397-469)||(48652502-48652574)
chr3 (397-469)||(24483740-24483812)
chr3 (397-469)||(53155492-53155564)
chr3 (398-469)||(22484961-22485032)
chr3 (410-469)||(54239080-54239139)
chr3 (397-463)||(53402625-53402691)
chr3 (389-462)||(1074962-1075035)
chr3 (404-469)||(36624756-36624821)
chr3 (397-469)||(40013334-40013409)
chr3 (397-469)||(19645216-19645288)
chr3 (397-469)||(27189456-27189528)
chr3 (410-469)||(55090645-55090704)
chr3 (412-469)||(4817892-4817949)
chr3 (397-469)||(48400894-48400966)
chr3 (389-469)||(39610191-39610279)
chr3 (431-469)||(41868356-41868394)
chr3 (254-310)||(2832306-2832362)
chr3 (397-466)||(40883933-40884003)
chr3 (412-469)||(54706730-54706788)
chr3 (254-299)||(8557881-8557926)
chr3 (266-303)||(52632155-52632192)
chr3 (254-310)||(25465911-25465967)
chr3 (90-165)||(54121971-54122047)
[»] scaffold0155 (1 HSPs)
scaffold0155 (384-469)||(35064-35149)
[»] scaffold1379 (2 HSPs)
scaffold1379 (397-469)||(1140-1212)
scaffold1379 (428-469)||(1-42)
[»] scaffold0321 (1 HSPs)
scaffold0321 (402-469)||(7178-7245)
[»] scaffold0470 (1 HSPs)
scaffold0470 (254-310)||(6355-6411)
[»] scaffold0536 (1 HSPs)
scaffold0536 (397-469)||(2895-2969)
[»] scaffold0432 (1 HSPs)
scaffold0432 (401-469)||(2471-2538)
[»] scaffold0204 (2 HSPs)
scaffold0204 (254-310)||(25973-26029)
scaffold0204 (254-303)||(14631-14680)
[»] scaffold0001 (1 HSPs)
scaffold0001 (397-469)||(404312-404384)
[»] scaffold1350 (1 HSPs)
scaffold1350 (400-469)||(1573-1641)
[»] scaffold0121 (1 HSPs)
scaffold0121 (384-468)||(13300-13388)


Alignment Details
Target: chr4 (Bit Score: 143; Significance: 6e-75; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 22 - 313
Target Start/End: Original strand, 26673988 - 26674283
Alignment:
Q  22 tgagcgactctggcacatgtcacggggaaggatattatagagtatctacaatgctagaactaagagtatttgcagtgtagtttgattcagttt-gaggtg 120  Q
    |||||| ||||||| |||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  26673988 tgagcgtctctggcccatgtcacggtgaaagatattatagagcatctacaatgctagaactaagagtatttgcggtgtagtttgattcacttttgaggtg 26674087  T
Q  121 aaaattcatttaaaccgtaagataaaataatatgcggtttggtttagtttagttcgagtgatttttaaaataaaacccgtattaaatcaatgcagtttgg 220  Q
    ||||||||||| ||| | ||||||||||||||||| ||||||||||||||  ||||  ||||||||||||||||||  | || ||| |||||| ||||||    
T  26674088 aaaattcatttgaacggcaagataaaataatatgcagtttggtttagtttgattcggttgatttttaaaataaaacatgcatcaaaccaatgcggtttgg 26674187  T
Q  221 attgaatcggttgatgtgag---nnnnnnnnnnnnnagacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaaata 313  Q
    ||||||||||||||||||||                ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  26674188 attgaatcggttgatgtgagtttttttttttttttgagacaatacaattttttgtttccaactttaaaatcgagttaaaaaggtaaaacacaaata 26674283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 26674350 - 26674439
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26674350 agatgggtgatttaggatcaattttgacctaaaaatcacccctccaaattgcttttccttctatcataattgaataagtgatttcacata 26674439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 31521977 - 31522049
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  31521977 tcaattttgacctaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacata 31522049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 24825636 - 24825716
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||||||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  24825636 atttaggatcaattttgacctaaaaatcactcctccgagttgtttttccttctatcctaattgaataagtgatttcacata 24825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 380 - 469
Target Start/End: Complemental strand, 26742606 - 26742517
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| |||||||||||||| ||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  26742606 agatgggtgatttaggatcaattttgacccaaaaatcacccatccgaattgtttttctttctatcttaattgaataagtgatttcacata 26742517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 7060319 - 7060391
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  7060319 tcaattttaacccaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacata 7060391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 13965555 - 13965627
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||    
T  13965555 tcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcctaattgaataagtgatttcacata 13965627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 38944273 - 38944201
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  38944273 tcaattttggcccaaaaatcacccctccaaattgtttttccttctatcgtagttgaataagtgatttcacata 38944201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 43244507 - 43244435
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  43244507 tcaattttgacccaaaaatcacccctctgaattgtttttccttctatcctaattgaataagtgatttcacata 43244435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 397 - 468
Target Start/End: Complemental strand, 394400 - 394329
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacat 468  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  394400 tcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattcaataagtgatttcacat 394329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 51152112 - 51152192
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| | ||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  51152112 atttanggtcaatattgacccaaaaatcacccctccgaattgtttttccttctatcctaatttaataagtgatttcacata 51152192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 7083942 - 7083870
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  7083942 tcaattttgatccaaaaatcacccctatgaattgtttttccttctatcataattgaataagtgatttcacata 7083870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 11210439 - 11210367
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||| |||||||||||||||||| |||| |||||||| | ||||||||||||||||||||||||||||    
T  11210439 tcaattttgccctaaaaatcacccctccgaattatttttcctcccatcataattgaataagtgatttcacata 11210367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 22757089 - 22757161
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||  |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  22757089 tcaattttgactcaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttcacata 22757161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 24100126 - 24100206
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||||||||||| | |||||| |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24100126 atttaggatcaattttgaaccaaaaattacccatccgaattgtttttccttctatcgtaattgaataagtgatttcacata 24100206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 8712525 - 8712597
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||| || |||| ||||||||||||||||    
T  8712525 tcaattttgacccaaaaatcacccctcataattgtttttccttctatcctagttgagtaagtgatttcacata 8712597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 29268903 - 29268831
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||  |||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||||    
T  29268903 tcaattttgaccctaaaatcacccctccgagttgtttttccttttatcctaattgaataagtgatttcacata 29268831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 44757168 - 44757096
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||| | | | ||||||||||||||||| ||||||||||||||||||||||||    
T  44757168 tcaattttgacccaaaaatcacccattcgagttgtttttccttctatcctaattgaataagtgatttcacata 44757096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 24568837 - 24568767
Alignment:
Q  399 aattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| ||||||||||| ||| |||| |||||||||||||| |||||||||||||||||| |||||    
T  24568837 aattttgacccaaaaatcacccttccgaattatttttccttctatcctaattgaataagtgattttacata 24568767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 469
Target Start/End: Original strand, 25658164 - 25658234
Alignment:
Q  399 aattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||  |||||||||| ||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  25658164 aattttgactcaaaaatcacctctccaaattgtttttccttctttcctaatttaataagtgatttcacata 25658234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 29922816 - 29922904
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattg---tttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||| | ||||||||||||||| |||||||||||||| |||   |||||| ||||||| ||||||||||||||||||||||||    
T  29922816 aggtgatttagggtcaattttgacctaataatcacccctccaagttgttttttttctttctatcctaattgaataagtgatttcacata 29922904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 5814329 - 5814414
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||| | |||||||||| | |||||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||||||    
T  5814329 aggtgatttagggtcaattttgatccaaaaatcatccctccaagttgttttcccttctatcttaattgaataagttatttcacata 5814414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 7861332 - 7861259
Alignment:
Q  396 atcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||| |||||||||| |||  |||| |||||||||||||| ||||| ||||||||||||||||||    
T  7861332 atcaattttgacccaaaaatcaccactctgaattatttttccttctatcctaattaaataagtgatttcacata 7861259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 416 - 469
Target Start/End: Complemental strand, 43493394 - 43493341
Alignment:
Q  416 cacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  43493394 cacccctccgaattgtttttccttctatcttaattgaataagtgatttcacata 43493341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 478145 - 478066
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||||| ||||||||||  ||| |||||||||||||| |||| |||||||||||||||||| |||||    
T  478145 atttatggtcaattttgacccaaaaatcacca-tccgaattgtttttccttatatcctaattgaataagtgattttacata 478066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 6911675 - 6911747
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | |||||||||| |||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  6911675 tcaattttgatccaaaaatcacctctccgatttgtttttccttctaccttaattgaataagtgatttcacata 6911747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 24611933 - 24611853
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| ||||||| |||| |||||||||||||| || |  |||| ||||||||| ||||||||||||||||||||||||    
T  24611933 atttatggtcaatttagacccaaaaatcacccctctaagtcattttcccttctatcctaattgaataagtgatttcacata 24611853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 30202033 - 30202105
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | ||||||||||||| | | |||||||||||| |||| ||||||||||||||||||||||||    
T  30202033 tcaattttgatccaaaaatcaccccttctagttgtttttccttttatcttaattgaataagtgatttcacata 30202105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 469
Target Start/End: Original strand, 50801214 - 50801284
Alignment:
Q  399 aattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| |||||||| || ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  50801214 aattttgatctaaaaataactcctccgaattatttttccttttatcctaattgaataagtgatttcacata 50801284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 19745376 - 19745456
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||||||||||||| ||||||||  | ||| |||||||||| ||| |||| ||||||||||| ||||||||||||    
T  19745376 atttaggatcaattttgacccaaaaatcattcatccgaattgtttttgcttttatcctaattgaataattgatttcacata 19745456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 19794430 - 19794350
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||||||||||||| ||||||||  | ||| |||||||||| ||| |||| ||||||||||| ||||||||||||    
T  19794430 atttaggatcaattttgacccaaaaatcattcatccgaattgtttttgcttttatcctaattgaataattgatttcacata 19794350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 20400029 - 20399961
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttca 465  Q
    |||||||||||| |||||||||||  || ||||| |||| |||||||| ||||||||||||||||||||    
T  20400029 tcaattttgacccaaaaatcacccacccgaattgctttttcttctatcctaattgaataagtgatttca 20399961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 32223288 - 32223232
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||    
T  32223288 agacaatacaattttttgtttccaacattaaaatctagttaaaaaggtaaaacacaa 32223232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 48338451 - 48338507
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||    
T  48338451 agacaatacaattttttgttttcaacattaaaatcgagttaaaaaggtaaaacacaa 48338507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 27394825 - 27394891
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgattt 463  Q
    |||||||||||| ||||||||||| |||  ||| |||||||||||||| ||||||||||||| ||||    
T  27394825 tcaattttgacccaaaaatcacccttccggattatttttccttctatcctaattgaataagtaattt 27394891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 48293383 - 48293329
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacac 308  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||    
T  48293383 agacaatacaattttttgtttccaacattaaaatcgagttaaaaaagtaaaacac 48293329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 6881958 - 6882023
Alignment:
Q  404 tgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| ||||||||||||| | | || |||||||||||||| ||||| ||||||||||||||||||    
T  6881958 tgacccaaaaatcaccccttcgagttatttttccttctatcctaattaaataagtgatttcacata 6882023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 411 - 464
Target Start/End: Complemental strand, 22049517 - 22049464
Alignment:
Q  411 aaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttc 464  Q
    |||||||||| | | ||||||||||||||||||| |||||||||||||||||||    
T  22049517 aaaatcaccctttcgaattgtttttccttctatcctaattgaataagtgatttc 22049464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 39837589 - 39837662
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttcc-ttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||| | | || ||||||| || |||| ||||||||||||||||||||||||    
T  39837589 tcaattttgacccaaaaatcaccccttcgatttttttttcccttttatcctaattgaataagtgatttcacata 39837662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 18536611 - 18536555
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||| ||||||    
T  18536611 agacaatacaatattttgtttccaaccttaaagtcgagttaaaaaggtaaaacacaa 18536555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 20887890 - 20887810
Alignment:
Q  388 tatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacat 468  Q
    |||||| | |||||||||||| ||||||||||| ||| |||| || ||  ||||||| ||||| |||||||||||||||||    
T  20887890 tatttaaggtcaattttgacccaaaaatcacccatccgaattattattttttctatcttaattcaataagtgatttcacat 20887810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 462
Target Start/End: Complemental strand, 626671 - 626609
Alignment:
Q  399 aattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatt 462  Q
    |||||||||| ||||||||||| ||  |||| |||||| |||||||||||||||||||||||||    
T  626671 aattttgacccaaaaatcacccatctgaattatttttc-ttctatcataattgaataagtgatt 626609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 422 - 469
Target Start/End: Complemental strand, 13586342 - 13586295
Alignment:
Q  422 tccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  13586342 tccaaattgttttttcttatatcgtaattgaataagtgatttcacata 13586295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 469
Target Start/End: Original strand, 2447809 - 2447867
Alignment:
Q  411 aaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| | |||| |||||  ||||||| ||||||||||||||||||||||||    
T  2447809 aaaatcaccccttcgaattatttttttttctatcctaattgaataagtgatttcacata 2447867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 36124471 - 36124401
Alignment:
Q  399 aattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| | ||||||||| | ||| ||||||||||||| ||||| ||||||||| | ||||||||||||    
T  36124471 aattttgatccaaaaatcactcatcccaattgtttttcctcctatcttaattgaatgattgatttcacata 36124401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 468
Target Start/End: Original strand, 39523433 - 39523475
Alignment:
Q  426 aattgtttttccttctatcataattgaataagtgatttcacat 468  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  39523433 aattgtttttccttttatcctaattgaataagtgatttcacat 39523475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 45351198 - 45351124
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattg-tttttccttctatcataa-ttgaataagtgatttcacata 469  Q
    |||||||||| | ||||||||||||||| ||||| ||||||||| |||  ||| |||||||||||||||||||||    
T  45351198 tcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacata 45351124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 45360677 - 45360603
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattg-tttttccttctatcataa-ttgaataagtgatttcacata 469  Q
    |||||||||| | ||||||||||||||| ||||| ||||||||| |||  ||| |||||||||||||||||||||    
T  45360677 tcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacata 45360603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 7084201 - 7084273
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||| |  | ||| | ||||||||||||||| | ||||||||||||||||| ||||||    
T  7084201 tcaattttgacccaaaaattatgcttccgatttgtttttccttctaccttaattgaataagtgattgcacata 7084273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 455
Target Start/End: Original strand, 28837059 - 28837128
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaata 455  Q
    |||| ||||| |||||||||||||| ||||||||||| |||   ||||||||||||||||| |||| |||||    
T  28837059 aggtaatttaggatcaattttgaccaaaaaatcacccatcc--gttgtttttccttctatcctaatcgaata 28837128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 29235409 - 29235350
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttc 440  Q
    |||| ||| ||||||||||||||||||| | ||||||| |||||| |||||||||||||||    
T  29235409 agatgggtgatttatgatcaattttgac-tcaaaatcaaccctcctaattgtttttccttc 29235350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 51907177 - 51907233
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    |||||||| || ||||||||| |||| |||||||| |||||||||||||| ||||||    
T  51907177 agacaatataattttttgttttcaacattaaaatcaagttaaaaaggtaaaacacaa 51907233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 463
Target Start/End: Original strand, 3159068 - 3159103
Alignment:
Q  428 ttgtttttccttctatcataattgaataagtgattt 463  Q
    ||||||||||||||||||||||| ||||||||||||    
T  3159068 ttgtttttccttctatcataattaaataagtgattt 3159103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 5122355 - 5122310
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaag 299  Q
    ||||||||||| |||||||||| ||| |||||||| ||||||||||    
T  5122355 agacaatacaattttttgtttctaacattaaaatcaagttaaaaag 5122310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 11031604 - 11031559
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaag 299  Q
    ||||||||||| ||||||||| |||| |||||||||||| ||||||    
T  11031604 agacaatacaattttttgttttcaacattaaaatcgagtcaaaaag 11031559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 6101993 - 6102049
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| ||||||||||||||  ||||||| |||||||| | ||| ||||||    
T  6101993 agacaatacaattttttgtttccaacagtaaaatcaagttaaaaggataaaacacaa 6102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 29232770 - 29232842
Alignment:
Q  161 ggtttagtttagttcgagtgatttttaaaataaaacccgtattaaatcaatgcagtttggattgaatcggttg 233  Q
    ||||| ||||||||||  ||| ||||||||||||| ||| | |||| ||||||  ||||||||| ||||||||    
T  29232770 ggtttggtttagttcggttgacttttaaaataaaatccgaactaaaccaatgcgatttggattggatcggttg 29232842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 29700833 - 29700877
Alignment:
Q  255 gacaatacaactttt-tgtttccaactttaaaatcgagttaaaaa 298  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||    
T  29700833 gacaatacaacttttttgtttccaacattaaaatcaagttaaaaa 29700877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 49640951 - 49641007
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| ||||| |||||||| |||||||| ||||||| || ||| ||||||    
T  49640951 agacaatacaattttttttttccaacattaaaatcaagttaaagagttaaaacacaa 49641007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 27241042 - 27241131
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||    
T  27241042 agatgggtgatttatgatcaattttgacccaaaaatcacccctctgaattgtttttccttttatcctaattgaataagtgatttcacata 27241131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 397 - 468
Target Start/End: Original strand, 17699548 - 17699619
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacat 468  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  17699548 tcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacat 17699619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 17331323 - 17331395
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  17331323 tcaattttgacccaaaaatcacccctccgatttgtttttccttctatcttaattgaataagtgatttcacata 17331395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 28040624 - 28040696
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  28040624 tcaattttgacccaaaaatcacccctccaaatcgtttttccttatatcctaattgaataagtgatttcacata 28040696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 42609126 - 42609211
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||| | |||||||||||||||||||||| | ||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  42609126 aggtgatttagggtcaattttgacctaaaaatcactcatccgaattgttttttcttctatcctaattgaataagtgatttcacata 42609211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 33164602 - 33164522
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||||  ||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  33164602 atttatggtcaattttgactcaaaaatcactcctccgaattgtttttccttctaccttaattgaataagtgatttcacata 33164522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 981159 - 981079
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||||||||||||| || |||| ||||||| | ||||||||||||||||||||||||||  ||||||||||||||    
T  981159 atttaggatcaattttgacccaataatcgcccctccgagttgtttttccttctatcataattgaacgagtgatttcacata 981079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 6281031 - 6281111
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||||| ||||||||||||||  |||| |||||||||||||  |||||||||||||||||| |||||    
T  6281031 atttatggtcaattttgacccaaaaatcacccctctgaattatttttccttctattctaattgaataagtgattttacata 6281111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 398 - 469
Target Start/End: Original strand, 6635245 - 6635317
Alignment:
Q  398 caattttgacctaaaaatcaccc-ctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||| ||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||    
T  6635245 caattttgacccaaaaatcaccctctctgagttgtttttccttctatcataattgaataagtgatttcacata 6635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 29097784 - 29097856
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||| ||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  29097784 tcaattttgacccaaagatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 29097856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 43493867 - 43493939
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | |||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  43493867 tcaattttgatccaaaaatcacctctccgaattgtttttccttctattctaattgaataagtgatttcacata 43493939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 20483173 - 20483253
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataa-ttgaataagtgatttcacata 469  Q
    ||||| |||||||||||||| |||||||| ||||||||||||||||||||| |||  ||| |||||||||||||||||||||    
T  20483173 atttaggatcaattttgacccaaaaatca-ccctccaaattgtttttccttttattctaatttgaataagtgatttcacata 20483253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 32347841 - 32347768
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgttttt-ccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||||| ||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||    
T  32347841 tcaactttgacccaaaaatcacccctccgacttgttttttccttctatcctaattgaataagtgatttcacata 32347768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 34431055 - 34431127
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||| | | |||||||||| |||||||  ||||||||||||||||||||||||    
T  34431055 tcaattttgacccaaaaatcacccattcgaattgttttttcttctattttaattgaataagtgatttcacata 34431127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 463
Target Start/End: Complemental strand, 26295197 - 26295118
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgattt 463  Q
    |||| ||||| | |||||||||| | ||||||||||||||| || |||||||||||||||| | ||||||||||||||||    
T  26295197 aggtgatttagggtcaattttgatccaaaaatcacccctccgaagtgtttttccttctatccttattgaataagtgattt 26295118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 12439757 - 12439692
Alignment:
Q  399 aattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttca 465  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||| || |||||||||||||||||    
T  12439757 aattttgacctaaaaatcaccc-tccgaattgtttttcattctatcctagttgaataagtgatttca 12439692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 469
Target Start/End: Complemental strand, 178245 - 178160
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||| | |||||||||||  |||||||||| |||| | |||| ||||||| |||| ||||||||||||||||||||||||    
T  178245 aggtgatttaaggtcaattttgactcaaaaatcacctctccgagttgtgtttccttatatcctaattgaataagtgatttcacata 178160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 17096368 - 17096293
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgttttt---ccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| || |||||||||||| | ||||||||   ||||||||| ||||||||||||||||||||||||    
T  17096368 tcaattttgacccaataatcacccctcccagttgttttttttccttctatcctaattgaataagtgatttcacata 17096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 39179939 - 39179882
Alignment:
Q  412 aaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  39179939 aaatcacccctccgaattatttttccttctattctaattgaataagtgatttcacata 39179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 415 - 469
Target Start/End: Complemental strand, 3079413 - 3079359
Alignment:
Q  415 tcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||| |||||    
T  3079413 tcacccctccgatttgtttttccttatatcataattgaataagtgatttaacata 3079359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 469
Target Start/End: Complemental strand, 39531544 - 39531457
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| | |||||||||||| |||| ||| |||||| | ||||||| ||||||||| ||||||||||||||||||||||||    
T  39531544 agatgggtgatttaaggtcaattttgacccaaaa-tcatccctccgagttgtttt-ccttctatcgtaattgaataagtgatttcacata 39531457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 2422911 - 2422963
Alignment:
Q  256 acaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacac 308  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||    
T  2422911 acaatacaagtttttgtttctaacattaaaatcgagttaaaaaggtaaaacac 2422963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 2589082 - 2589138
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||||| ||| ||||||    
T  2589082 agacaatacaattttttgtttccaattttaaaatcaagttaaaaagttaaaacacaa 2589138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 441
Target Start/End: Complemental strand, 7771932 - 7771888
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttct 441  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||    
T  7771932 tcaattttgacccaaaaatcacccctccgaattgtttttccttct 7771888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 469
Target Start/End: Original strand, 3740355 - 3740424
Alignment:
Q  399 aattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||  |||||||| || ||  ||||||||| ||||||||| ||||||||||||||||||||||||    
T  3740355 aattttgactcaaaaatcatccatctgaattgtttt-ccttctatcctaattgaataagtgatttcacata 3740424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 469
Target Start/End: Original strand, 17687214 - 17687272
Alignment:
Q  411 aaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||  ||| | ||||||||||||||||| ||||||||||||| ||||||||||    
T  17687214 aaaatcaccaatccgagttgtttttccttctatcttaattgaataagttatttcacata 17687272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 27572013 - 27571959
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacac 308  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||| |||| ||||    
T  27572013 agacaatacaattttttgtttccaacattaaaattgagttaaaaaagtaaaacac 27571959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 469
Target Start/End: Complemental strand, 42396651 - 42396566
Alignment:
Q  385 ggttatttatga-tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||  |||||||||||| |||||||| |  | | |||| ||||| |||||||| |||||||||||| |||||||||||    
T  42396651 ggttatttatgggtcaattttgacccaaaaatcatcttttcgaattattttttcttctatcttaattgaataagcgatttcacata 42396566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 18432195 - 18432251
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    |||||| |||| ||||||||| | || ||||||||||||||||||||||| ||||||    
T  18432195 agacaacacaattttttgttttcgacattaaaatcgagttaaaaaggtaaaacacaa 18432251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 23882242 - 23882170
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||   |||||||| |  ||||||||||||||| |||||||  ||||||||||||||||| |||||    
T  23882242 tcaattttgattcaaaaatcatcaatccaaattgtttttctttctatccaaattgaataagtgatttgacata 23882170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 297
Target Start/End: Complemental strand, 734000 - 733957
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaa 297  Q
    |||||||||||||||||||||||||| |||||||| || |||||    
T  734000 agacaatacaactttttgtttccaacattaaaatcaagctaaaa 733957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 2588957 - 2589006
Alignment:
Q  121 aaaattcatttaaaccgtaagataaaataatatgcggtttggtttagttt 170  Q
    |||| |||||| ||||||||||||||| || |||||||||||||| ||||    
T  2588957 aaaagtcatttgaaccgtaagataaaaaaacatgcggtttggtttggttt 2589006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 469
Target Start/End: Complemental strand, 6681969 - 6681928
Alignment:
Q  428 ttgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||  |||||||||||||||||||||||    
T  6681969 ttgtttttccttttatctgaattgaataagtgatttcacata 6681928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 11402704 - 11402749
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaag 299  Q
    |||| |||||| |||||||||||||| |||||||| ||||||||||    
T  11402704 agacgatacaattttttgtttccaacattaaaatcaagttaaaaag 11402749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 469
Target Start/End: Original strand, 12891706 - 12891743
Alignment:
Q  432 ttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  12891706 ttttccttttatcctaattgaataagtgatttcacata 12891743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 18845623 - 18845668
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaag 299  Q
    |||| |||||| |||||||||||||| |||||||| ||||||||||    
T  18845623 agacgatacaattttttgtttccaacattaaaatcaagttaaaaag 18845668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 691518 - 691474
Alignment:
Q  266 tttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    |||||||||||||| |||||||| |||||||||| ||| ||||||    
T  691518 tttttgtttccaacattaaaatcaagttaaaaagttaaaacacaa 691474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 6633441 - 6633485
Alignment:
Q  266 tttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||| |||| |||||||| |||||||||||||| ||||||    
T  6633441 tttttgttttcaacattaaaatccagttaaaaaggtaaaacacaa 6633485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 12378993 - 12378949
Alignment:
Q  266 tttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    |||||||||| |||  |||||||||||||||||||||| ||||||    
T  12378993 tttttgtttctaacaataaaatcgagttaaaaaggtaaaacacaa 12378949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 18653792 - 18653844
Alignment:
Q  412 aaatcacccctccaaattgtttttccttctatcataattgaataagtgatttc 464  Q
    |||||||| ||| || |||||||| ||| |||| |||||||||||||||||||    
T  18653792 aaatcacctctctaagttgttttttcttatatcctaattgaataagtgatttc 18653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 36760221 - 36760264
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaa 298  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||    
T  36760221 agacaatacaattttttgtttccaaatttaaaat-gagttaaaaa 36760264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 39915567 - 39915618
Alignment:
Q  412 aaatcacccctccaaattgtttttccttctatcataattgaataagtgatttc 464  Q
    |||||| |||||| |||||||||||||||| || || ||||||||||||||||    
T  39915567 aaatcagccctcctaattgtttttccttctttc-tacttgaataagtgatttc 39915618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 27095683 - 27095772
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| | |||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  27095683 agatgggtgatttagggtcaattttgacctaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 27095772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 44942263 - 44942352
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||||| |||||||||||| ||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||||    
T  44942263 agatgggtgatttatggtcaattttgacccaaaaatcacccctccgagttgttttttcttctatcctaattgaataagtgatttcacata 44942352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 467
Target Start/End: Complemental strand, 43474254 - 43474184
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcaca 467  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  43474254 tcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcaca 43474184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 11937985 - 11937912
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttcc-ttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||    
T  11937985 tcaattttgacccaaaaatcacccctccgaattgtttttcctttctatcctaattgaataagtgatttcacata 11937912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 25067834 - 25067919
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||| | |||||||||||| ||||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  25067834 aggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctattttaattgaataagtgatttcacata 25067919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 9978795 - 9978723
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||    
T  9978795 tcaattttgacccaaaaatcaccccttcaaattgtttttccttttatcttaattgaataaatgatttcacata 9978723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 12704682 - 12704754
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||| | |||||||||||||| |||| ||||||||||||||||||||||||    
T  12704682 tcaattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgatttcacata 12704754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 15919869 - 15919941
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||    
T  15919869 tcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataaatgatttcacata 15919941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 17268258 - 17268178
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||||| |||||||| |||| | | ||||||||||||||||| ||||||||||||||||||||||||    
T  17268258 atttatggtcaattttgacccaaaaatcatcccttcgagttgtttttccttctatcctaattgaataagtgatttcacata 17268178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 34416887 - 34416815
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||||| |||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  34416887 tcaattttgaccaaaaaatcatccctccgaattgtttttccttatatcctaattgaataagtgatttcacata 34416815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 35333492 - 35333572
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||||||||||||| |||||||||||||   ||||||||||||| ||||| ||||||||||||||||||||||||    
T  35333492 atttaggatcaattttgacccaaaaatcacccctaagaattgtttttcctgctatcctaattgaataagtgatttcacata 35333572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 13740783 - 13740718
Alignment:
Q  400 attttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttca 465  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  13740783 attttgacccaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttca 13740718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 5754283 - 5754355
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||||| || |||||||| ||||||||||||    
T  5754283 tcaattttgacccaaaaatcatccctccgaattgtttttccttctatcctagttgaataaatgatttcacata 5754355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 9690099 - 9690027
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||||| ||||||||||||||| || |||||||||||||||| |||||||||||||||| |||||||    
T  9690099 tcaaatttgacccaaaaatcacccctccgaactgtttttccttctatcctaattgaataagtgatctcacata 9690027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 20561258 - 20561186
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||  ||| ||||||||| |||||||||    
T  20561258 tcaattttgacccaaaaatcacccctccgaattgtttttccttctatccaaatcgaataagtggtttcacata 20561186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 22597130 - 22597202
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||||| |||||| | ||||||||||||||||| ||||| ||||||||||||||||||    
T  22597130 tcaattttgacccaaaaatcatccctccgagttgtttttccttctatcctaattaaataagtgatttcacata 22597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 33012072 - 33012144
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||| | ||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  33012072 tcaattttgacccaaaaatcactcatccgaattgtttttccttctattctaattgaataagtgatttcacata 33012144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 38535431 - 38535359
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||| |||||||   |||| |||||||||||||||||||||||||||||||||||||||    
T  38535431 tcaattttgacccaaaaagcacccctttgaattttttttccttctatcataattgaataagtgatttcacata 38535359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 18089518 - 18089446
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | ||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||||||    
T  18089518 tcaattttgatccaaaaatcactcctccgaattgttttttcttatatcctaattgaataagtgatttcacata 18089446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 397 - 468
Target Start/End: Complemental strand, 34963191 - 34963121
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacat 468  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||| | |||||||||||||||||||||||    
T  34963191 tcaattttgacctaaaaatcaccc-tctgatttgtttttccttctaccctaattgaataagtgatttcacat 34963121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 27301457 - 27301400
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaaa 311  Q
    ||||||||||| |||||||||||||  ||||||||||||||||||||||| |||||||    
T  27301457 agacaatacaattttttgtttccaaaattaaaatcgagttaaaaaggtaaaacacaaa 27301400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 6946523 - 6946467
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||    
T  6946523 agacaatacaattttttgtttccaacattaaaatcaagttaaaaaggtaaaacacaa 6946467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 10287131 - 10287060
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||| |||||||||||||||| |||||  ||| ||| |||| ||||||||||||||||||||||||    
T  10287131 tcaattttgacataaaaatcacccctccgaattgcattt-cttttatcctaattgaataagtgatttcacata 10287060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 31908942 - 31908870
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | ||||||||||| ||| |||||||||| ||| |||| || |||||||||||||||||||||    
T  31908942 tcaattttgatccaaaaatcacccttccgaattgttttttcttttatcctagttgaataagtgatttcacata 31908870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 36868003 - 36868075
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||  ||||||||||||||  ||||||||||||||||||  ||||| |||||| |||||||||||    
T  36868003 tcaattttgactcaaaaatcacccctctgaattgtttttccttctattctaattcaataagcgatttcacata 36868075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 31720049 - 31720002
Alignment:
Q  256 acaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaa 303  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  31720049 acaatacaattttttgtttccaacattaaaatcgagttaaaaaggtaa 31720002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 32015215 - 32015291
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaata----agtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| | |||||||||||| |||||||||| ||||    ||||||||||||||    
T  32015215 tcaattttgacccaaaaatcacccctccgagttgtttttccttatatcataattcaataaataagtgatttcacata 32015291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 34470959 - 34471033
Alignment:
Q  397 tcaattttgacctaaaaatcac--ccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||||||  |||||| |||||||| || ||||||| ||||||||| ||||||||||||||    
T  34470959 tcaattttgacccaaaaatcacacccctccgaattgtttatctttctatcttaattgaatcagtgatttcacata 34471033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 468
Target Start/End: Complemental strand, 38384568 - 38384497
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacat 468  Q
    |||||||||||| |||||||||  |||| | |||||||||||| || | |||||||||||||||||||||||    
T  38384568 tcaattttgacccaaaaatcacatctccgatttgtttttccttataccctaattgaataagtgatttcacat 38384497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 4426782 - 4426712
Alignment:
Q  399 aattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| ||||||||||  | ||| | ||||||||||||||||| ||||||||||| ||||||||||||    
T  4426782 aattttgatctaaaaatcagtcatccgatttgtttttccttctatcctaattgaataaatgatttcacata 4426712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 450
Target Start/End: Complemental strand, 28262036 - 28261966
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataatt 450  Q
    |||| ||| ||||| | |||||||||||| ||||||||| | ||| |||||||||||||||||||||||||    
T  28262036 agatgggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttccttctatcataatt 28261966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 28231208 - 28231151
Alignment:
Q  412 aaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||| ||| ||||||||||||||||||| |  |||||||||||||||||||||    
T  28231208 aaatcacccatccgaattgtttttccttctatcttggttgaataagtgatttcacata 28231151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 1331115 - 1331170
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||    
T  1331115 agacaatacaattttttgtttccaacattaaaatcgagtt-aaaaggtaaaacacaa 1331170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 4604433 - 4604361
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||| || | | | | ||||||||||||||||  ||||||||||||||||||||||||    
T  4604433 tcaattttgacccaaaaattactcattcgagttgtttttccttctattctaattgaataagtgatttcacata 4604361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 469
Target Start/End: Original strand, 4739338 - 4739396
Alignment:
Q  411 aaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||| | ||||||||||||| ||| ||||| ||||||| ||||||||||    
T  4739338 aaaatcacccctccgagttgtttttccttccatcctaattaaataagtaatttcacata 4739396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 467
Target Start/End: Complemental strand, 7073074 - 7073004
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcaca 467  Q
    |||||||||||| ||||||| ||| | | ||||| ||||||||||||| ||||||||||||| | ||||||    
T  7073074 tcaattttgacccaaaaatcgccctttcgaattggttttccttctatcctaattgaataagtaacttcaca 7073004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 28790620 - 28790661
Alignment:
Q  258 aatacaactttttgtttccaactttaaaatcgagttaaaaag 299  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  28790620 aatacaattttttgtttccaacattaaaatcgagttaaaaag 28790661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 469
Target Start/End: Original strand, 4732102 - 4732138
Alignment:
Q  433 tttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4732102 tttccttctatcctaattgaataagtgatttcacata 4732138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 464
Target Start/End: Complemental strand, 11798650 - 11798576
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttc 464  Q
    ||||||| |||||||||||| |||| |||||||||||  ||| |||||||| |||| ||||| ||||||| |||||    
T  11798650 atttatggtcaattttgacccaaaa-tcacccctccatgttgcttttccttatatcctaattaaataagtaatttc 11798576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 469
Target Start/End: Complemental strand, 13879095 - 13879060
Alignment:
Q  434 ttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||| ||||||||||||||||||||||||    
T  13879095 ttccttctatcctaattgaataagtgatttcacata 13879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 469
Target Start/End: Complemental strand, 14019220 - 14019185
Alignment:
Q  434 ttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14019220 ttccttctatcctaattgaataagtgatttcacata 14019185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 469
Target Start/End: Original strand, 32314466 - 32314509
Alignment:
Q  426 aattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| |||||||| ||||||||||| ||||||||||||    
T  32314466 aattgttttttcttctatcctaattgaataaatgatttcacata 32314509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 22014078 - 22014131
Alignment:
Q  256 acaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacaca 309  Q
    |||||| || |||| ||||||||| ||||||||||||||||||| ||| |||||    
T  22014078 acaatataatttttcgtttccaacattaaaatcgagttaaaaagctaaaacaca 22014131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 42603903 - 42603823
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  42603903 atttatggtcaattttgactcaaaaatcacccctccgaattgtttttcattctatcataattgaataagtgatttcacata 42603823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 9785312 - 9785384
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||    
T  9785312 tcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcttaattgaataagtgatttcacata 9785384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 17473849 - 17473777
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  17473849 tcaattttgaccaaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 17473777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 17579365 - 17579437
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  17579365 tcaattttgaccaaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 17579437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 11833005 - 11833086
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccc-tccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||||| |||||||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||    
T  11833005 atttatggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctttcctaattgaataagtgatttcacata 11833086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 380 - 469
Target Start/End: Complemental strand, 28665055 - 28664966
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| | ||||||||||||  |||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  28665055 agatgggtgatttagggtcaattttgaccctaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 28664966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 45457682 - 45457610
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||  ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  45457682 tcaattttgacgcaaaaatcactcctccgaattgtttttccttctatcttaattgaataagtgatttcacata 45457610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 5684360 - 5684432
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||  |||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  5684360 tcaattttgacgcaaaaatcacctctccgaattgtttttcattctatcctaattgaataagtgatttcacata 5684432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 5709410 - 5709482
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||  |||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  5709410 tcaattttgacgcaaaaatcacctctccgaattgtttttcattctatcctaattgaataagtgatttcacata 5709482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 21603458 - 21603529
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||| ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  21603458 tcaattttgacc-aaaaagcacccctctgaattgtttttccttctatcctaattgaataagtgatttcacata 21603529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 22747633 - 22747562
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| |||||    
T  22747633 tcaattttgacccaaaaatcacccctccaagttgtttt-ccttctatcctaattgaataagtgatttgacata 22747562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 36579438 - 36579366
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||  |||||||||||||| ||||||||||||||||||| || |||||||||||||| ||||||    
T  36579438 tcaattttgacccgaaaatcacccctccgaattgtttttccttctatcctagttgaataagtgattccacata 36579366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 39533101 - 39533029
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||||| | |||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  39533101 tcaattttgacccaaaaatcatctctctgaattgtttttccttctatcttaattgaataagtgatttcacata 39533029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 21990656 - 21990729
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgttttt-ccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||  ||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||||    
T  21990656 tcaattttgactgaaaaatcacccctccgaattgttttttcctgctatcctaattgaataagtgatttcacata 21990729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 32740747 - 32740820
Alignment:
Q  397 tcaattttgacctaaaa-atcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||| ||||||||  | ||||||||||||||||||| ||||||||||||||||||||||||    
T  32740747 tcaattttgaccaaaaaaatcaccccctcgaattgtttttccttctatcctaattgaataagtgatttcacata 32740820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 2622587 - 2622655
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttca 465  Q
    |||||||||||| ||||||||| | ||| ||||||||||||||||||| ||||||||||||| ||||||    
T  2622587 tcaattttgacccaaaaatcacgcatccgaattgtttttccttctatcttaattgaataagtaatttca 2622655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 17509329 - 17509258
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  17509329 tcaattttgaccaaaaaatcaccc-tccgaattatttttccttttatcctaattgaataagtgatttcacata 17509258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 17543885 - 17543956
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  17543885 tcaattttgaccaaaaaatcaccc-tccgaattatttttccttttatcctaattgaataagtgatttcacata 17543956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 42644663 - 42644743
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||||||||||||  ||||||||| | |   ||||||||||||||||||| ||||||||||||||||||||||||    
T  42644663 atttaggatcaattttgactcaaaaatcactcatttgaattgtttttccttctatcctaattgaataagtgatttcacata 42644743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 45482059 - 45482131
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||  |||||||||||||| |  |||||||||||||||| ||||| ||||||||||||||||||    
T  45482059 tcaattttgaccccaaaatcacccctccgagctgtttttccttctatcctaattaaataagtgatttcacata 45482131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 46026155 - 46026083
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||| | ||| ||||||||||||||||||| ||||||||||||| |||| |||||    
T  46026155 tcaattttgacccaaaaatcacacatccgaattgtttttccttctatcctaattgaataagttatttaacata 46026083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 48304521 - 48304453
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttca 465  Q
    |||||||||||| ||||||||||| ||| ||||| ||||||| ||||| ||||||||||||||||||||    
T  48304521 tcaattttgacccaaaaatcacccatccgaattgcttttcctgctatcctaattgaataagtgatttca 48304453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 1281260 - 1281191
Alignment:
Q  400 attttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||| ||||||||||| ||| ||||||||||| || |||  ||||||||||||||||||||||||    
T  1281260 attttgaccaaaaaatcacccatccgaattgtttttcattatattctaattgaataagtgatttcacata 1281191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 4621506 - 4621425
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttca 465  Q
    ||||||||||   |||||||||||||||||||||| | | | | ||||||||||||||| |||||||||||||| |||||||    
T  4621506 aggttatttagagtcaattttgacctaaaaatcactctttcgagttgtttttccttctaccataattgaataagcgatttca 4621425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 6667390 - 6667463
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataa-ttgaataagtgatttcacata 469  Q
    |||||||||||| |||||||||||| || |||||||||| |||||||  ||| |||||||||||||||||||||    
T  6667390 tcaattttgacccaaaaatcaccccaccgaattgttttttcttctattctaatttgaataagtgatttcacata 6667463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 10574359 - 10574448
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| | |||||||||||  ||||||||||||||| |||||||||||||| |||| |||||||||||  ||||| |||||    
T  10574359 agatgggtgatttagggtcaattttgactcaaaaatcacccctccgaattgtttttccttttatcctaattgaataaacgattttacata 10574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 385 - 469
Target Start/End: Complemental strand, 24320361 - 24320277
Alignment:
Q  385 ggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||| | |||||||||||  ||||||||| | | | | ||||||||||||||||| ||||| ||||||||||||||||||    
T  24320361 ggttatttaaggtcaattttgactcaaaaatcactcattcgagttgtttttccttctatcttaatttaataagtgatttcacata 24320277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 27535451 - 27535523
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| | | ||||||||||| ||| ||||||||||||||||||  |||||| |||||||||||||||||    
T  27535451 tcaatttttatccaaaaatcacccatccgaattgtttttccttctattctaattgtataagtgatttcacata 27535523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 415 - 469
Target Start/End: Original strand, 43847083 - 43847137
Alignment:
Q  415 tcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| |||||||||||||  |||| ||||||||||||||||||||||||    
T  43847083 tcacccctccgaattgtttttcctcttatcctaattgaataagtgatttcacata 43847137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 29628212 - 29628261
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaa 303  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  29628212 agacaatacaattttttgtttccaacattaaaaccgagttaaaaaggtaa 29628261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 422 - 469
Target Start/End: Complemental strand, 9720075 - 9720028
Alignment:
Q  422 tccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  9720075 tccaaattgttttttcttatatcgtaattgaataagtgatttcacata 9720028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 426 - 469
Target Start/End: Original strand, 10094465 - 10094508
Alignment:
Q  426 aattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  10094465 aattgtttttccttttatcctaattgaataagtgatttcacata 10094508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 426 - 469
Target Start/End: Complemental strand, 15674709 - 15674666
Alignment:
Q  426 aattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  15674709 aattgtttttcctcctatcctaattgaataagtgatttcacata 15674666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 27215165 - 27215111
Alignment:
Q  256 acaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||| ||| ||||||    
T  27215165 acaatacaattttttgtttccaacattaaaattgagttaaaaagttaaaacacaa 27215111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 6880073 - 6880017
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| ||||||||| |||| |||||||| |||||||||| ||| ||||||    
T  6880073 agacaatacaattttttgttttcaaccttaaaatcaagttaaaaagttaaaacacaa 6880017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 469
Target Start/End: Complemental strand, 14657917 - 14657877
Alignment:
Q  429 tgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  14657917 tgtttttccttctatcttaattgaataagttatttcacata 14657877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 37376170 - 37376095
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttca 465  Q
    ||||| ||| |||||||||  ||| ||||||||| | |||| |||||||||||||| |||||||||||||| |||||    
T  37376170 atttaggataaattttgactcaaagatcaccccttcgaattatttttccttctatc-taattgaataagtggtttca 37376095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 43202541 - 43202597
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| |||||||||||||| |||||||  ||||||||| |||| ||||||    
T  43202541 agacaatacaattttttgtttccaacattaaaattaagttaaaaaagtaaaacacaa 43202597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 469
Target Start/End: Original strand, 3266420 - 3266455
Alignment:
Q  434 ttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||| ||||||||||||||||||||||||    
T  3266420 ttccttctatcctaattgaataagtgatttcacata 3266455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 297
Target Start/End: Original strand, 41459281 - 41459324
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaa 297  Q
    ||||||||| || ||||||||||||| |||||||||||||||||    
T  41459281 agacaatacgaccttttgtttccaacattaaaatcgagttaaaa 41459324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 2308207 - 2308146
Alignment:
Q  133 aaccgtaagataaaataatatgcggtttggtttagtttagttcgagtgatttttaaaataaaa 195  Q
    ||||| ||||||||| | ||||||||||||||| |||| |||||  |||||||||||||||||    
T  2308207 aaccggaagataaaa-attatgcggtttggtttggtttggttcggttgatttttaaaataaaa 2308146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 439
Target Start/End: Original strand, 40761584 - 40761626
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttcctt 439  Q
    |||||||||||| ||||||||||||||| || |||||||||||    
T  40761584 tcaattttgacccaaaaatcacccctccgaactgtttttcctt 40761626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 431 - 469
Target Start/End: Original strand, 41287987 - 41288025
Alignment:
Q  431 tttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  41287987 tttttccttctatcctaattgaataggtgatttcacata 41288025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 26215076 - 26215023
Alignment:
Q  257 caatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||| || |||||||||||||| |||||||| | |||||||||||| ||||||    
T  26215076 caatataattttttgtttccaacattaaaatcaaattaaaaaggtaaaacacaa 26215023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 30079561 - 30079505
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    |||| |||||| |||||||||||||| |||||||| | |||||||| ||| ||||||    
T  30079561 agacgatacaattttttgtttccaacattaaaatcaacttaaaaagctaaaacacaa 30079505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 40848978 - 40849022
Alignment:
Q  266 tttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||| |||| ||||||||||||||||||| ||| ||||||    
T  40848978 tttttgttttcaacattaaaatcgagttaaaaagataaaacacaa 40849022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 43908626 - 43908702
Alignment:
Q  90 tttgcagtgtagtttgattcagttt-gaggtgaaaattcatttaaaccgtaagataaaataatatgcggtttggttt 165  Q
    ||||| ||| ||||||||||||||| || || |||| ||||| |||||||| ||||||| |||| ||||| ||||||    
T  43908626 tttgcggtgcagtttgattcagtttcgaagttaaaagtcattcaaaccgtatgataaaaaaatacgcggtctggttt 43908702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 74158 - 74231
Alignment:
Q  396 atcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  74158 atcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcacata 74231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 42490875 - 42490960
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||| | |||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  42490875 aggtgatttagggtcaagtttgacctaaaaatcacccctccgaattgtttttcgttctatcttaattgaataagtgatttcacata 42490960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 424417 - 424345
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  424417 tcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 424345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 7995686 - 7995614
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  7995686 tcaattttgacccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatttcacata 7995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 32784103 - 32784175
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  32784103 tcaattttgacccaaaaatcacccctccgaattgtttttccttctatccttattgaataagtgatttcacata 32784175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 3232766 - 3232855
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| | |||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  3232766 agatgggtgatttagggtcaattttgatcaaaaaatcacccctccgaattgtttttccttctatcctaattgaataaatgatttcacata 3232855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 28678256 - 28678184
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  28678256 tcaattttgacccaaaaatcactcgtccgaattgtttttcgttctatcataattgaataagtgatttcacata 28678184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 29205280 - 29205348
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttca 465  Q
    |||||||||||| |||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  29205280 tcaattttgacccaaaaatcaccccttggaattgtttttccttctatcataattgaataagtgatttca 29205348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 33487156 - 33487088
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttca 465  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  33487156 tcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaatatgtgatttca 33487088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 27534694 - 27534766
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||||| |||||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  27534694 tcaattttgacccaaaaatcatccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 27534766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 37822471 - 37822399
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||| |||| ||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  37822471 tcaattttgacccaaaaattacccttctgaattgtttttccttctatcctaattgaataagtgatttcacata 37822399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 14265262 - 14265351
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| | |||||||||||  ||||||||||||||| |  |||||||||||||||| ||||| ||||||||||||||||||    
T  14265262 agatgggtgatttagggtcaattttgacaaaaaaatcacccctccgagctgtttttccttctatcctaattaaataagtgatttcacata 14265351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 20411551 - 20411640
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||||| |||||||||||| ||||||||||| ||| ||||||||||| || |||   |||||||||||||||||||||||    
T  20411551 agatgggtgatttatggtcaattttgacccaaaaatcacccatccgaattgtttttctttttattcaaattgaataagtgatttcacata 20411640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 4882485 - 4882413
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||| ||||||||||||||| | ||||||||| || |||| ||||||||||||||||||||||||    
T  4882485 tcaatttcgacccaaaaatcacccctccgatttgtttttcattatatcctaattgaataagtgatttcacata 4882413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 12871616 - 12871688
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| | ||||||||| || |||| |||| |||||||||||||||||||    
T  12871616 tcaattttgacccaaaaatcacccctccgagttgtttttcattatatcctaatcgaataagtgatttcacata 12871688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 18343601 - 18343681
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||||||||||||| ||||||||||||| | | ||||||||||||||| | ||||| ||| ||||||||||||||    
T  18343601 atttaggatcaattttgacccaaaaatcaccccttcgatttgtttttccttctaccttaattaaatgagtgatttcacata 18343681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 469
Target Start/End: Original strand, 42276365 - 42276423
Alignment:
Q  411 aaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||| ||||||||||||    
T  42276365 aaaatcacccctccgaattgttttttcttctatcataattaaataactgatttcacata 42276423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 44517157 - 44517214
Alignment:
Q  412 aaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  44517157 aaatcacccttccgaattgtttttccttctatcctaattcaataagtgatttcacata 44517214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 4871160 - 4871080
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||||||||||||  | |||||||| |||| |||||||||||||| |||  ||||||||||||| ||||||||||    
T  4871160 atttaagatcaattttgactcataaatcaccactccgaattgtttttccttttattctaattgaataagttatttcacata 4871080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 468
Target Start/End: Original strand, 17347594 - 17347664
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacat 468  Q
    |||||||||||| ||||||||||| ||| | |||||||| ||||||||||||  ||||||||||||||||||    
T  17347594 tcaattttgacc-aaaaatcacccatccgagttgttttttcttctatcataaaggaataagtgatttcacat 17347664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 17651868 - 17651915
Alignment:
Q  256 acaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaa 303  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  17651868 acaatacaattttttgtttccaacattaaaatcgagttaaaaaggtaa 17651915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 13488659 - 13488590
Alignment:
Q  400 attttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||| ||||||||||| ||| | ||||||||||||| | | |||||||||||||||||| |||||    
T  13488659 attttgacccaaaaatcacccatccgatttgtttttccttccaccttaattgaataagtgattttacata 13488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 35980250 - 35980201
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaa 303  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  35980250 agacaatacaattttttgtttccaacattaaaatcaagttaaaaaggtaa 35980201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 464
Target Start/End: Complemental strand, 33125944 - 33125865
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttc 464  Q
    |||| ||||| | |||||||||||| |||| |||| | || ||||||||||||||||| | ||||||||||||||||||||    
T  33125944 aggtgatttagggtcaattttgacccaaaa-tcactcatctaaattgtttttccttcttttataattgaataagtgatttc 33125865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 469
Target Start/End: Complemental strand, 45193718 - 45193680
Alignment:
Q  431 tttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  45193718 tttttccttctatcctaattgaataagtgatttcacata 45193680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 15880123 - 15880074
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaa 303  Q
    |||||| |||| |||||||||||||| |||||||| ||||||||||||||    
T  15880123 agacaacacaattttttgtttccaacattaaaatcaagttaaaaaggtaa 15880074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 35992573 - 35992524
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaa 303  Q
    ||||||||||| |||||| ||||||| |||||||| ||||||||||||||    
T  35992573 agacaatacaattttttgcttccaacattaaaatcaagttaaaaaggtaa 35992524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 457
Target Start/End: Complemental strand, 15791622 - 15791554
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataag 457  Q
    ||||| |||||||||||||  ||||||||| | ||| | |||||||||||| |||| ||||||||||||    
T  15791622 atttaggatcaattttgacacaaaaatcactcatccgagttgtttttccttatatcttaattgaataag 15791554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 17989162 - 17989218
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    |||||||| || ||||||||| |||| ||||||| ||||||||||||||| ||||||    
T  17989162 agacaatagaaatttttgttttcaacattaaaatggagttaaaaaggtaaaacacaa 17989218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 47984473 - 47984417
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    |||||| |||| ||||||||| | || ||||||||||||||||||||||| ||||||    
T  47984473 agacaacacaattttttgttttcgacattaaaatcgagttaaaaaggtaaaacacaa 47984417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 469
Target Start/End: Original strand, 10627008 - 10627067
Alignment:
Q  410 aaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| |||||| | ||||||||| || |||| ||||||||||||| ||||||||||    
T  10627008 aaaaatcatccctccgagttgtttttctttatatcctaattgaataagtaatttcacata 10627067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 443
Target Start/End: Complemental strand, 33939128 - 33939082
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctat 443  Q
    |||||||||||| ||||||||||||||  ||||||||||| ||||||    
T  33939128 tcaattttgacccaaaaatcacccctctgaattgtttttctttctat 33939082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 32910341 - 32910296
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaag 299  Q
    |||| |||||| |||||||||||||| |||||||| ||||||||||    
T  32910341 agacgatacaattttttgtttccaacattaaaatcaagttaaaaag 32910296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 469
Target Start/End: Original strand, 51418040 - 51418080
Alignment:
Q  428 ttgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  51418040 ttgtttttccttctatcctaattgaa-aagtgatttcacata 51418080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 469
Target Start/End: Complemental strand, 29726690 - 29726650
Alignment:
Q  429 tgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||| |||| |||| |||||||||||||||||||    
T  29726690 tgtttttccttatatcctaatcgaataagtgatttcacata 29726650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 45750473 - 45750545
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||||| |  ||| | |  ||||||||| |||| ||||||||||||| ||||||||||    
T  45750473 tcaattttgacccaaaaatcatcaatccgattgttttttccttttatcctaattgaataagttatttcacata 45750545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 6132 - 6204
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  6132 tcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 6204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 41361719 - 41361799
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||||| ||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  41361719 atttatggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccgtaattgaataagtgatttcacata 41361799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 31202436 - 31202525
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| | |||||||||||| |||||||| || ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  31202436 agatgggtgatttaaggtcaattttgacccaaaaatcatccatccaaattgtttttctttctattataattgaataagtgatttcacata 31202525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 10338956 - 10338884
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||  ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  10338956 tcaattttgacgcaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 10338884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 37612648 - 37612720
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| |||| |||||||||||||| || |||||||||||||||||||||    
T  37612648 tcaattttgacccaaaaatcacccctccgaattttttttccttctatcctagttgaataagtgatttcacata 37612720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 468
Target Start/End: Complemental strand, 2025351 - 2025272
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacat 468  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||| |||  |||||||||||||||||||||||    
T  2025351 atttatggtcaattttgaccaaaaaatcacccttccaagttgtttttccttttattctaattgaataagtgatttcacat 2025272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 401 - 469
Target Start/End: Complemental strand, 30027010 - 30026942
Alignment:
Q  401 ttttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| ||||||||||| ||| | |||||||| |||||||||||||||||||||||||||||||||    
T  30027010 ttttgacccaaaaatcacccatccgagttgttttttcttctatcataattgaataagtgatttcacata 30026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 31407882 - 31407810
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||||| | |||| |||||||||||||||||||||| |||||||| ||||||||||||    
T  31407882 tcaattttgacccaaaaatcatctctccgaattgtttttccttctatcatagttgaataaatgatttcacata 31407810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 39067823 - 39067751
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||||||   ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  39067823 tcaattttgacccaaaaatcactgttccaaattgtttttccttctatcctaatttaataagtgatttcacata 39067751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 2234602 - 2234532
Alignment:
Q  399 aattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| | ||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||    
T  2234602 aattttgatccaaaaatcaccccttcgaattgtttttccttctatcctagttgaataagtgatttcacata 2234532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 6617037 - 6617093
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  6617037 agacaatacaattttttgtttccaactttaaaatcgagttaaaaagctaaaacacaa 6617093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 24791310 - 24791230
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||||| |||||||| || ||| |||||||||||||| |||| ||||| |||||||||||| |||||    
T  24791310 atttatggtcaattttgacccaaaaatcatccatccgaattgtttttccttatatcctaattcaataagtgatttaacata 24791230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 397 - 468
Target Start/End: Original strand, 11161877 - 11161948
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacat 468  Q
    |||||||||||| ||||||||||||| ||| ||||||||| || |||| ||||||||||||| |||||||||    
T  11161877 tcaattttgacccaaaaatcaccccttcaagttgtttttctttatatcctaattgaataagtcatttcacat 11161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 23971226 - 23971156
Alignment:
Q  399 aattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| ||||||||| | ||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  23971226 aattttgaccaaaaaatcactcatccgagttgtttttccttctattctaattgaataagtgatttcacata 23971156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 9501584 - 9501657
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttt-tccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | ||||||||||| ||  ||||||||| |||||||||| ||||||||||||||||||||||||    
T  9501584 tcaattttgatccaaaaatcacccatctgaattgttttttccttctatcctaattgaataagtgatttcacata 9501657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 10147941 - 10148014
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttc-cttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| || |||||||||||| | ||||||||  |||||||| ||||||||||||||||||||||||    
T  10147941 tcaattttgacccaataatcacccctccgagttgtttttttcttctatcctaattgaataagtgatttcacata 10148014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 469
Target Start/End: Complemental strand, 14600845 - 14600760
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||| | |||||||||||| |||||||| || ||| | |||||||| |||||||| ||||||||||| ||||||||||||    
T  14600845 aggtgatttagggtcaattttgacccaaaaatcatccatccgagttgttttttcttctatcctaattgaataactgatttcacata 14600760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 1040027 - 1039955
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | ||||||||||| ||| ||||| ||||||||||||  ||||| ||||||||||||||||||    
T  1040027 tcaattttgatccaaaaatcacccatccgaattggttttccttctattctaattcaataagtgatttcacata 1039955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 6591342 - 6591398
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||    
T  6591342 agacaatacaattttttatttccaactttaaaatcgagttaaaaagctaaaacacaa 6591398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 12329621 - 12329693
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | ||||||||||  | | |||||||||||||| |||| ||||||||||||||||||||||||    
T  12329621 tcaattttgatccaaaaatcaccatttcgaattgtttttccttttatcctaattgaataagtgatttcacata 12329693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 13570860 - 13570788
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| ||||||||||  | ||| ||||||||||| ||||||| ||||| ||||||||||||||||||    
T  13570860 tcaattttgatctaaaaatcattcatcccaattgtttttcattctatcctaattaaataagtgatttcacata 13570788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 468
Target Start/End: Complemental strand, 1810353 - 1810283
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacat 468  Q
    |||||||||||| ||||||||||||||| | || |||||| ||||||| ||||| |||||||||||||||||    
T  1810353 tcaattttgacccaaaaatcacccctccgatttttttttc-ttctatcctaattcaataagtgatttcacat 1810283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 469
Target Start/End: Original strand, 31308174 - 31308215
Alignment:
Q  428 ttgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  31308174 ttgtttttccttctatcctaattgaataagtgatttcacata 31308215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 37128600 - 37128548
Alignment:
Q  417 acccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||||||||||||||||| || |||||||||||||||||||||    
T  37128600 acccatccgaattgtttttccttctatcctagttgaataagtgatttcacata 37128548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 428 - 469
Target Start/End: Original strand, 4757191 - 4757232
Alignment:
Q  428 ttgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  4757191 ttgtttttccttctatcataattaaataaatgatttcacata 4757232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 3204889 - 3204818
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||| |||| ||| |||||||||||| |||||  ||||| ||| ||||||||||||||    
T  3204889 tcaattttgacccaaaaattaccc-tccgaattgtttttccatctattctaatttaatgagtgatttcacata 3204818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 7583906 - 7583851
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatc 444  Q
    ||||| |||||||||||||| ||||||||||| ||| | |||||||||||| ||||    
T  7583906 atttaggatcaattttgacccaaaaatcacccatccgagttgtttttccttttatc 7583851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 464
Target Start/End: Complemental strand, 30039473 - 30039399
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttc 464  Q
    ||||||| |||||||||||| |||| |||| | ||| |||||||||||||||| |  |||||||||| ||||||||    
T  30039473 atttatggtcaattttgacccaaaa-tcactcatccgaattgtttttccttcttttctaattgaatatgtgatttc 30039399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 450
Target Start/End: Complemental strand, 13576317 - 13576257
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataatt 450  Q
    ||||| ||||||||||||||| ||||||| |||||| | ||||||||| ||||||| |||||    
T  13576317 atttaggatcaattttgacct-aaaatcatccctccgagttgtttttctttctatcctaatt 13576257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 3129537 - 3129493
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaa 298  Q
    ||||||| ||| ||||||||| |||| ||||||||||||||||||    
T  3129537 agacaatgcaattttttgttttcaacattaaaatcgagttaaaaa 3129493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 7428410 - 7428370
Alignment:
Q  256 acaatacaactttttgtttccaactttaaaatcgagttaaa 296  Q
    ||||||||| |||||||||||||| ||| ||||||||||||    
T  7428410 acaatacaattttttgtttccaacattagaatcgagttaaa 7428370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 12193512 - 12193448
Alignment:
Q  172 gttcgagtgatttttaaaataaaacccgtattaaatcaatgcagtttggattgaatcggttgatg 236  Q
    |||||| ||| ||||||||||||| | | |  |||||||||| |||||||||| |||||||||||    
T  12193512 gttcgattgacttttaaaataaaatctgaaccaaatcaatgcggtttggattggatcggttgatg 12193448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 12437940 - 12437876
Alignment:
Q  172 gttcgagtgatttttaaaataaaacccgtattaaatcaatgcagtttggattgaatcggttgatg 236  Q
    |||||| ||| ||||||||||||| | | |  |||||||||| |||||||||| |||||||||||    
T  12437940 gttcgattgacttttaaaataaaatctgaaccaaatcaatgcggtttggattggatcggttgatg 12437876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 15288919 - 15288863
Alignment:
Q  410 aaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcac 466  Q
    |||||||| |||| | ||||||||||| ||||||| ||||| |||| ||||||||||    
T  15288919 aaaaatcatcccttcgaattgtttttctttctatcctaattaaatacgtgatttcac 15288863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 15469288 - 15469232
Alignment:
Q  410 aaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcac 466  Q
    |||||||| |||| | ||||||||||| ||||||| ||||| |||| ||||||||||    
T  15469288 aaaaatcatcccttcgaattgtttttctttctatcctaattaaatacgtgatttcac 15469232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 38926391 - 38926347
Alignment:
Q  266 tttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||| |||| |||||||| |||||||||||||| ||||||    
T  38926391 tttttgttttcaacattaaaatcaagttaaaaaggtaaaacacaa 38926347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 12481504 - 12481424
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||||||||||||| ||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  12481504 atttaggatcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 12481424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 21507934 - 21507862
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  21507934 tcaattttgacccaaacatcacccctccaaattgtttttccttctatcctagttgaataagtgatttcacata 21507862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 14783297 - 14783225
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||    
T  14783297 tcaattttgacccaaaaatcacgcctccgaattgtttttccttctatcctagttgaataagtgatttcacata 14783225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 15590205 - 15590133
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||    
T  15590205 tcaattttgacccaaaaatcacccctctgaattgttttttcttctatcctaattgaataagtgatttcacata 15590133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 6419984 - 6419912
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | ||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||    
T  6419984 tcaattttgatccaaaaatcacccctctgagttgtttttccttctatcctaattgaataagtgatttcacata 6419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 401 - 469
Target Start/End: Complemental strand, 31937540 - 31937473
Alignment:
Q  401 ttttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  31937540 ttttgacccaaaaatcacccctccgaattgtttttc-ttctatcctaattgaataagtgatttcacata 31937473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 455
Target Start/End: Complemental strand, 29927513 - 29927447
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaata 455  Q
    ||||||| |||||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  29927513 atttatggtcaattttgacccaaaaatcactcctccaagttgtttttccttctatcctaattgaata 29927447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 8693786 - 8693711
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttcta---tcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||||   || ||||||||||||||||||||||||    
T  8693786 tcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctcctaattgaataagtgatttcacata 8693711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 23654232 - 23654317
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||| | |||||||||||| ||||||||||| ||| | ||||||||||||||| | ||| ||||||||||||||||||||    
T  23654232 aggtgatttagggtcaattttgacccaaaaatcacccatccgatttgtttttccttctaccttaactgaataagtgatttcacata 23654317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 2304944 - 2304864
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| |||| ||||||||| |||||||| |||||  | ||||||| |||||| |||||||||||||||||||||||||||    
T  2304944 atttaggatcgattttgacccaaaaatcaaccctctgagttgttttcccttctgtcataattgaataagtgatttcacata 2304864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 19135080 - 19135026
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacac 308  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||    
T  19135080 agacaatacaattttttgttttcaacattaaaatcgagttaaaaaggtaaaacac 19135026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 4562966 - 4563011
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaag 299  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||    
T  4562966 agacaatacaattttttgtttccaacattaaaatcgagttaaaaag 4563011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 469
Target Start/End: Complemental strand, 19402930 - 19402862
Alignment:
Q  401 ttttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||| | |||||||||||||   | |||||||||||| ||||||||||||| |||||||||||||||    
T  19402930 ttttgatccaaaaatcacccctttgagttgtttttccttgtatcataattgaacaagtgatttcacata 19402862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 30752646 - 30752690
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaa 298  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||    
T  30752646 agacaatacaattttttgtttccaacttcaaaatcgagttaaaaa 30752690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 35220029 - 35219958
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||  ||||||||||||||||| ||| |||||||||||||  ||| ||||||||||| |||||||    
T  35220029 tcaattttgactcaaaaatcacccctccaagttg-ttttccttctatccgaatcgaataagtgatatcacata 35219958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 4922008 - 4921935
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgttttt--ccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||||| |||||||| | | ||||||  ||||||||| ||||||||||||||||||||||||    
T  4922008 tcaattttgacccaaaaat-acccctcccagtagtttttttccttctatcttaattgaataagtgatttcacata 4921935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 446
Target Start/End: Original strand, 4085013 - 4085062
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcat 446  Q
    |||||||||||| |||||||| || ||| |||||||||||||||||||||    
T  4085013 tcaattttgaccgaaaaatcatccttccgaattgtttttccttctatcat 4085062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 8064604 - 8064656
Alignment:
Q  258 aatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||| |||||||||||||| |||||||| |||||||||| ||| ||||||    
T  8064604 aatacaattttttgtttccaacattaaaatcaagttaaaaagctaaaacacaa 8064656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 469
Target Start/End: Original strand, 4393778 - 4393837
Alignment:
Q  410 aaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||||  | ||||||| ||||||||| |||| ||| |||||||||||||||    
T  4393778 aaaaatcacccctctgagttgttttaccttctatcctaatagaacaagtgatttcacata 4393837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 469
Target Start/End: Complemental strand, 23638211 - 23638172
Alignment:
Q  430 gtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  23638211 gtttttccttctacaataattgaataagtgatttcacata 23638172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 7676323 - 7676274
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaa 303  Q
    ||||||||||| ||||| |||  ||| |||||||||||||||||||||||    
T  7676323 agacaatacaattttttcttttaaacattaaaatcgagttaaaaaggtaa 7676274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 892308 - 892252
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    |||||||| || ||||||||| |||| |||||||||||||| |||| ||| ||||||    
T  892308 agacaatataattttttgttttcaacattaaaatcgagttagaaagttaaaacacaa 892252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 12108523 - 12108479
Alignment:
Q  266 tttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    |||||||||||||| |||||||  |||||||||||||| ||||||    
T  12108523 tttttgtttccaacattaaaattaagttaaaaaggtaaaacacaa 12108479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 14564543 - 14564587
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaa 298  Q
    ||||||||||| |||||||||| ||| |||||||| |||||||||    
T  14564543 agacaatacaattttttgtttcgaacattaaaatcaagttaaaaa 14564587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 14585457 - 14585529
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  14585457 tcaattttgacccaaaaatcactcctctaaattgtttttccttctatcctaattgaataagtgatttcacata 14585529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 49628221 - 49628149
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| || |||||||||||||||||||||    
T  49628221 tcaattttgacctaaaaatcacccctctgaattgtttttccttctatcctagttgaataagtgatttcacata 49628149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 31270304 - 31270393
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| | |||||||||||| ||||||||||||| | |||| |||||||||||||| ||||||||||||||||||||||||    
T  31270304 agatgggtgatttagggtcaattttgacccaaaaatcaccccttcgaattatttttccttctatcctaattgaataagtgatttcacata 31270393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 3456930 - 3457010
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||| | |||||||||| |||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  3456930 atttatggtcaattttgatccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatttaacata 3457010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 11819078 - 11819150
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  11819078 tcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 11819150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 36691933 - 36691861
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| | || |||||||||||||| ||||||||||||||||||||||||    
T  36691933 tcaattttgacccaaaaatcacccctccgagttatttttccttctatcctaattgaataagtgatttcacata 36691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 469
Target Start/End: Complemental strand, 32080905 - 32080816
Alignment:
Q  380 agataggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||| ||||| | |||||||||||| ||||||||||||||| | ||||||||||||||| | |||||||||| |||||||||||||    
T  32080905 agatgggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataggtgatttcacata 32080816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 4206653 - 4206573
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||| | ||||||||||||||| |||||||||||| | |||| |||||||||||||| |||||||||    
T  4206653 atttatggtcaattttgatcaaaaaatcacccctccgaattgtttttccatatatcctaattgaataagtgttttcacata 4206573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 13702106 - 13702034
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| |||| |||||||| | |||| |||||| ||||||||||||||||||||||||||||||||    
T  13702106 tcaattttgacccaaaagtcaccccttcgaattatttttctttctatcataattgaataagtgatttcacata 13702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 30156415 - 30156344
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||    
T  30156415 tcaattttgacccaaaaatcacccctccgaattgtttt-ccttttatcctaattgaataagtgatttcacata 30156344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 31462880 - 31462808
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||| | |||||||||||||| |||| |||||||||||||||||| |||||    
T  31462880 tcaattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgattttacata 31462808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 34960992 - 34960920
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||||  |||||||||| |||||||  ||||||||||||||||||||||||    
T  34960992 tcaattttgacccaaaaatcacccctcagaattgttttttcttctattctaattgaataagtgatttcacata 34960920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 35174699 - 35174771
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||| |||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||    
T  35174699 tcaatttcgacccaaaaatcacccctttgaattgtttttccttctatcctaattgaataagtgatttcacata 35174771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 38527250 - 38527330
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| ||||||| |||| | ||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  38527250 atttaggatcaatcttgaaccaaaaatcacacatccaaattgtttttccttctatcttaattgaataaatgatttcacata 38527330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 48652574 - 48652502
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||||| ||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  48652574 tcaactttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 48652502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 24483812 - 24483740
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||  | ||||||||| ||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  24483812 tcaattttgacacacaaatcacccatctgaattgtttttcattctatcataattgaataagtgatttcacata 24483740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 53155564 - 53155492
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||| | | |||||||||||||| |||| ||||| ||||||||||||||||||    
T  53155564 tcaattttgacccaaaaatcacccattcgaattgtttttccttatatcctaattcaataagtgatttcacata 53155492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 398 - 469
Target Start/End: Original strand, 22484961 - 22485032
Alignment:
Q  398 caattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||| ||||||||| | |||  |||||||||||||||||| ||||||||||||||||||| ||||    
T  22484961 caattttgacccaaaaatcactcttccggattgtttttccttctatcctaattgaataagtgatttcgcata 22485032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 410 - 469
Target Start/End: Complemental strand, 54239139 - 54239080
Alignment:
Q  410 aaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||| | ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  54239139 aaaaatcacacatccgaattgtttttccttctatcctaattgaataagtgatttcacata 54239080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 53402625 - 53402691
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgattt 463  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||  ||||| ||||||||||||    
T  53402625 tcaattttgacccaaaaatcacccatccgaattgtttttccttctattctaattcaataagtgattt 53402691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 462
Target Start/End: Complemental strand, 1075035 - 1074962
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatt 462  Q
    ||||||| |||||||||||| ||||||||||| ||| | |||||||||||| |||  |||||||||||||||||    
T  1075035 atttatggtcaattttgacccaaaaatcacccatccgagttgtttttccttatattctaattgaataagtgatt 1074962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 36624821 - 36624756
Alignment:
Q  404 tgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||| ||||||||||| ||| ||||||||||||||||||| ||| | ||||||||||||||||||    
T  36624821 tgacccaaaaatcacccatccgaattgtttttccttctatcctaactaaataagtgatttcacata 36624756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 40013409 - 40013334
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttcta---tcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||| | | |||||||||||||||||   || ||||||||||||||||||||||||    
T  40013409 tcaattttgacccaaaaatcacccattcgaattgtttttccttctatcctcctaattgaataagtgatttcacata 40013334  T

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Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 19645216 - 19645288
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||||||| || || ||| |||||||||| ||||| || ||||| ||||||||||||||||||    
T  19645216 tcaattttgacctaaaaaccatccatccgaattgttttttcttctgtcctaattaaataagtgatttcacata 19645288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 27189528 - 27189456
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | |||||| || | ||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27189528 tcaattttgatccaaaaattactcttccgaattgtttttccttctatcctaattgaataagtaatttcacata 27189456  T

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Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 469
Target Start/End: Complemental strand, 55090704 - 55090645
Alignment:
Q  410 aaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||||| | ||||||||||||||| | ||||| ||||||||||||||||||    
T  55090704 aaaaatcacccctccgatttgtttttccttctaccttaattaaataagtgatttcacata 55090645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 4817949 - 4817892
Alignment:
Q  412 aaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| |||||||||||||||||||| || |||| |||||||||| |||||||||||||    
T  4817949 aaattacccctccaaattgtttttctttttatcctaattgaataggtgatttcacata 4817892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 48400894 - 48400966
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||| | ||  ||||||||||||||||| | || || ||||||||||||||||||    
T  48400894 tcaattttgacccaaaaatcacacatcggaattgtttttccttctaccctattttaataagtgatttcacata 48400966  T

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Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 39610191 - 39610279
Alignment:
Q  389 atttatgatcaattttgacctaaaaatcacccctccaaattgttttt--------ccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| |||||||||||| || |||||||||||| | ||||||||        ||||||||| ||||||||||||||||||||||||    
T  39610191 atttatggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacata 39610279  T

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Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 469
Target Start/End: Complemental strand, 41868394 - 41868356
Alignment:
Q  431 tttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  41868394 tttttccttctatcctaattgaataagtgatttcacata 41868356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 2832362 - 2832306
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| ||| ||||| |||| ||||||||||||| ||||||||| ||||||    
T  2832362 agacaatacaattttatgttttcaacattaaaatcgagtttaaaaggtaaaacacaa 2832306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 40884003 - 40883933
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgttttt-ccttctatcataattgaataagtgatttcac 466  Q
    |||||||||||| |||||||| |  | | |||||||||| |||| |||| |||||||||||||||||||||    
T  40884003 tcaattttgacccaaaaatcatcaattcgaattgttttttccttttatcctaattgaataagtgatttcac 40883933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 54706788 - 54706730
Alignment:
Q  412 aaatcacccctccaaattgtttttccttcta-tcataattgaataagtgatttcacata 469  Q
    |||| ||||||||||||||||||||||| || ||  |||| ||||||||||||||||||    
T  54706788 aaattacccctccaaattgtttttccttttattcccaattcaataagtgatttcacata 54706730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 8557926 - 8557881
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaag 299  Q
    |||| |||||| |||||||||||||| |||||||| ||||||||||    
T  8557926 agacgatacaattttttgtttccaacattaaaatcaagttaaaaag 8557881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 303
Target Start/End: Original strand, 52632155 - 52632192
Alignment:
Q  266 tttttgtttccaactttaaaatcgagttaaaaaggtaa 303  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  52632155 tttttgtttccaacattaaaatcgagttaaaaatgtaa 52632192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 25465911 - 25465967
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| ||||||||| |||| |||||||| |||||||| | ||| ||||||    
T  25465911 agacaatacaattttttgttttcaacattaaaatcaagttaaaaggctaaaacacaa 25465967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 54121971 - 54122047
Alignment:
Q  90 tttgcagtgtagtttgattc-agtttgaggtgaaaattcatttaaaccgtaagataaaataatatgcggtttggttt 165  Q
    ||||| ||| |||||||||| | |||||||| |||| ||||   ||||||||||||||| | |||||||||||||||    
T  54121971 tttgcggtgcagtttgattcgattttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgcggtttggttt 54122047  T

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Target: scaffold0155 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 35064 - 35149
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||| ||||| | |||||||||||| ||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  35064 aggtgatttagggtcaattttgacccaaaaatcacccatccgagttgtttttccttctatcctaattgaataagtgatttcacata 35149  T

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Target: scaffold1379 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 1212 - 1140
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||    
T  1212 tcaattttgacccaaaaatcacccctgcgaattgtttttccttctaccctaattgaataagtgatttcacata 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 469
Target Start/End: Original strand, 1 - 42
Alignment:
Q  428 ttgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  1 ttgtttttccttctatcttaattgaataagtgatttcacata 42  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 7245 - 7178
Alignment:
Q  402 tttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||| ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  7245 tttgacccaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 7178  T

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Target: scaffold0470 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 6355 - 6411
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  6355 agacaatacaattttttgtttccaactttaaaatcgagttaaaaagctaaaacacaa 6411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 2895 - 2969
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttt--tccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||||| || |||||||||||| | |||||||  |||||||||| ||||||||||||||||||||||||    
T  2895 tcaattttgacccaataatcacccctccgagttgtttttttccttctatcctaattgaataagtgatttcacata 2969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 401 - 469
Target Start/End: Complemental strand, 2538 - 2471
Alignment:
Q  401 ttttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||| ||||||||||| ||  | |||||||||||||||||||||| |||||||||||||||||||    
T  2538 ttttgacccaaaaatcaccc-tctgagttgtttttccttctatcataatcgaataagtgatttcacata 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 25973 - 26029
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaatacacaa 310  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||    
T  25973 agacaatacaattttttgttttcaacattaaaatcgagttaaaaaggtaaaacacaa 26029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 14631 - 14680
Alignment:
Q  254 agacaatacaactttttgtttccaactttaaaatcgagttaaaaaggtaa 303  Q
    ||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  14631 agacaatacaattttttgtttgcaacattaaaatcgagttaaaaaggtaa 14680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 404384 - 404312
Alignment:
Q  397 tcaattttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    |||||||||| | ||||||||||| ||| ||| ||||||| | ||||| ||||||||||||||||||||||||    
T  404384 tcaattttgatccaaaaatcacccatccgaatagtttttcttgctatcctaattgaataagtgatttcacata 404312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 1573 - 1641
Alignment:
Q  400 attttgacctaaaaatcacccctccaaattgtttttccttctatcataattgaataagtgatttcacata 469  Q
    ||||||||| |||||||||| |||  | || | |||||||||| ||||||||||||||||||||||||||    
T  1573 attttgacccaaaaatcacctctctgattt-tgtttccttctaccataattgaataagtgatttcacata 1641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 13388 - 13300
Alignment:
Q  384 aggttatttatgatcaattttgacctaaaaatcacccctccaaattgtttttccttct----atcataattgaataagtgatttcacat 468  Q
    |||| ||||| | |||||||||| | ||||||||||||||| ||||||||||  || |    ||| |||||||||||||||||||||||    
T  13388 aggtgatttagggtcaattttgatccaaaaatcacccctccgaattgtttttttttttttttatcctaattgaataagtgatttcacat 13300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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