View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7255_low_8 (Length: 246)

Name: NF7255_low_8
Description: NF7255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7255_low_8
NF7255_low_8
[»] chr3 (8 HSPs)
chr3 (25-197)||(15468991-15469163)
chr3 (32-143)||(13838335-13838446)
chr3 (23-105)||(16744894-16744976)
chr3 (25-110)||(2449832-2449917)
chr3 (32-110)||(22274620-22274698)
chr3 (32-110)||(48421153-48421231)
chr3 (32-110)||(39655947-39656025)
chr3 (169-227)||(13838451-13838509)
[»] chr8 (10 HSPs)
chr8 (25-224)||(22321933-22322132)
chr8 (32-227)||(24929440-24929635)
chr8 (25-110)||(5237660-5237745)
chr8 (25-110)||(24661853-24661938)
chr8 (25-110)||(22907987-22908072)
chr8 (25-110)||(43685119-43685204)
chr8 (25-227)||(2544369-2544570)
chr8 (25-227)||(41507452-41507654)
chr8 (32-110)||(25609717-25609795)
chr8 (32-137)||(22887376-22887481)
[»] scaffold0116 (1 HSPs)
scaffold0116 (32-218)||(29505-29691)
[»] chr5 (9 HSPs)
chr5 (25-227)||(17472231-17472433)
chr5 (32-222)||(4200474-4200664)
chr5 (25-110)||(16535770-16535855)
chr5 (25-110)||(37052317-37052402)
chr5 (32-165)||(25004410-25004543)
chr5 (25-110)||(25900946-25901031)
chr5 (32-227)||(2031227-2031422)
chr5 (25-110)||(20622543-20622628)
chr5 (25-110)||(21234132-21234217)
[»] chr7 (5 HSPs)
chr7 (25-223)||(13911504-13911702)
chr7 (25-110)||(7292426-7292511)
chr7 (25-110)||(11515801-11515886)
chr7 (25-110)||(15442169-15442254)
chr7 (25-110)||(30262734-30262819)
[»] scaffold1734 (1 HSPs)
scaffold1734 (32-218)||(813-999)
[»] scaffold0032 (1 HSPs)
scaffold0032 (32-227)||(13928-14123)
[»] chr4 (9 HSPs)
chr4 (32-227)||(9794811-9795006)
chr4 (32-214)||(34394671-34394853)
chr4 (25-110)||(10488135-10488220)
chr4 (25-110)||(16328531-16328616)
chr4 (25-110)||(26679605-26679690)
chr4 (32-218)||(34196689-34196875)
chr4 (32-110)||(19558939-19559017)
chr4 (32-165)||(49071346-49071479)
chr4 (84-142)||(16225724-16225782)
[»] scaffold0141 (2 HSPs)
scaffold0141 (25-110)||(26368-26453)
scaffold0141 (25-110)||(22113-22198)
[»] chr2 (4 HSPs)
chr2 (25-110)||(14907045-14907130)
chr2 (25-110)||(23819644-23819729)
chr2 (25-110)||(20014584-20014669)
chr2 (23-110)||(25601429-25601516)
[»] chr1 (2 HSPs)
chr1 (25-110)||(51452076-51452161)
chr1 (32-227)||(2421479-2421674)
[»] scaffold0269 (1 HSPs)
scaffold0269 (32-105)||(12524-12597)
[»] scaffold0124 (1 HSPs)
scaffold0124 (25-110)||(2187-2272)
[»] scaffold0078 (1 HSPs)
scaffold0078 (25-102)||(37842-37919)
[»] chr6 (2 HSPs)
chr6 (32-110)||(15005498-15005576)
chr6 (32-102)||(26506518-26506588)
[»] scaffold0021 (1 HSPs)
scaffold0021 (32-110)||(22639-22717)
[»] scaffold0009 (2 HSPs)
scaffold0009 (32-227)||(271449-271643)
scaffold0009 (29-111)||(254900-254982)
[»] scaffold0075 (1 HSPs)
scaffold0075 (32-98)||(4360-4426)
[»] scaffold0063 (1 HSPs)
scaffold0063 (32-110)||(44714-44792)
[»] scaffold0057 (1 HSPs)
scaffold0057 (32-113)||(5460-5541)
[»] scaffold0079 (1 HSPs)
scaffold0079 (32-110)||(4430-4508)


Alignment Details
Target: chr3 (Bit Score: 117; Significance: 1e-59; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 15469163 - 15468991
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcct 124  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||    
T  15469163 gtaggtgaaaacagcaaaagaacacctcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggagcaacaagcatgttgccct 15469064  T
Q  125 gtgcagggcgcctagcgctattagtggggcgcccagcgctgagctactgacttgtgggcgtccagcacccttg 197  Q
    || |||||||||||||||||  |||||||||||||||||||   |||||||||||||||| | ||| ||||||    
T  15469063 gtccagggcgcctagcgctagcagtggggcgcccagcgctggcttactgacttgtgggcgcctagcgcccttg 15468991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 13838335 - 13838446
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||| |||||  ||||| ||||    
T  13838335 aaaacagcaaaagaacacttcaaaacgattgcctaggacccctacacgaccacccccaagcacccggacacggagcaacaagcatgttgccctgtccagg 13838434  T
Q  132 gcgcctagcgct 143  Q
    ||||| ||||||    
T  13838435 gcgcccagcgct 13838446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 16744976 - 16744894
Alignment:
Q  23 aggtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacgga 105  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  16744976 aggtaggtgaaaacagcaaaagaacacctcaaaacgatcgcctaggactcctgcacgaccacccccaagcacccggacacgga 16744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 2449917 - 2449832
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  2449917 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 2449832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 22274620 - 22274698
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  22274620 aaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcactcggacacggaacaac 22274698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 48421153 - 48421231
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||||    
T  48421153 aaaacagcaaaagaacacttcaaaacgatcgcctaggacccctacacgaccacccccaagcacctggacacggaacaac 48421231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 39655947 - 39656025
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||| ||||    
T  39655947 aaaacaacaaaagaacacttcaaaacgatcgcctaggacccctacacgaccacccccaagcactcggacacggaacaac 39656025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 13838451 - 13838509
Alignment:
Q  169 tactgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcgcgtt 227  Q
    ||||||||| |||||| | ||| |||||| |||||||||||||||||||||||||||||    
T  13838451 tactgacttttgggcgcctagcgcccttgttcaggcgcagcgctccgtaaacgcgcgtt 13838509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 6e-52; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 25 - 224
Target Start/End: Complemental strand, 22322132 - 22321933
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcct 124  Q
    |||||| |||||||||||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||  |||    
T  22322132 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctagggcccctacacgaccacccccaagcacctggacacggagcaacaagcatgttgccct 22322033  T
Q  125 gtgcagggcgcctagcgctattagtggggcgcccagcgctgagctactgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcgc 224  Q
    || |||||||||| | |||   |||||||||||||| ||||   |||||||||||||||| ||| | || ||| ||||||||||||||||||||||||||    
T  22322032 gtccagggcgcctggtgctggcagtggggcgcccagtgctggcttactgacttgtgggcgcccatcgcctttgttcaggcgcagcgctccgtaaacgcgc 22321933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 227
Target Start/End: Complemental strand, 24929635 - 24929440
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||      ||| |||||| | ||    
T  24929635 aaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaacgttcccgttgtcctgtcctgg 24929536  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctgagc-tactgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcgcgtt 227  Q
    |||||| ||||||   |||  ||||| |||||| |||  |||||| |||||||| | ||| |||||| |||||||||| |||||||||||| |||||    
T  24929535 gcgcctggcgctaagggtgcagcgcctagcgct-agcacactgacatgtgggcgcctagcgcccttgttcaggcgcagagctccgtaaacgagcgtt 24929440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 5237660 - 5237745
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  5237660 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 5237745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 24661938 - 24661853
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24661938 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 24661853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 22908072 - 22907987
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22908072 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggaaccctgcacgaccacccccaagcacccggacacggaacaac 22907987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 43685119 - 43685204
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  43685119 gtaggtgaaaacagcaaaagaacacttcaaaacaatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 43685204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 227
Target Start/End: Original strand, 2544369 - 2544570
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcct 124  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||||||| |||||||| ||| ||||||||| ||||||| ||||      ||| ||||    
T  2544369 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctacacgacca-ccctaagcacccgaacacggaacaacgttcccgttgtcct 2544467  T
Q  125 gtgcagggcgcctagcgctattagtggggcgcccagcgctgagc-tactgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcg 223  Q
    || | |||||||| ||||||   |||  ||||| |||||| |||  |||||| |||||||| | ||| ||||||  |||||||| |||||||||||||||    
T  2544468 gtcctgggcgcctggcgctagaggtgcagcgcctagcgct-agcacactgacatgtgggcgcctagcgcccttgtgcaggcgcatcgctccgtaaacgcg 2544566  T
Q  224 cgtt 227  Q
    ||||    
T  2544567 cgtt 2544570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 41507654 - 41507452
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcct 124  Q
    |||||| |||||| ||||||||||| ||||||||||||| |||||||||| ||||||||| |||||||||| ||||||||| ||||      ||| ||||    
T  41507654 gtaggtgaaaacaacaaaagaacacttcaaaacgatcgcctaggacccctacacgaccactcccaagcacctggacacggaacaacgttcccgttgtcct 41507555  T
Q  125 gtgcagggcgcctagcgctattagtggggcgcccagcgctgagct-actgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcg 223  Q
    || | |||||| | ||||||   |||  ||||| ||||||| ||| |||||| |||||||  | ||| ||||||  ||||||||||||||| ||||||||    
T  41507554 gtcctgggcgcatggcgctagaggtgcagcgcctagcgctg-gctcactgacatgtgggcccctagcgcccttgtgcaggcgcagcgctccataaacgcg 41507456  T
Q  224 cgtt 227  Q
    ||||    
T  41507455 cgtt 41507452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 25609717 - 25609795
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||||||||||||||| |||||| |||| | |||||||||| |||||||||||||||||| ||||||||||| ||||    
T  25609717 aaaacagcaaaagaacacttcaaaatgatctcttaggacccctacacgaccacccccaagcaaccggacacggaacaac 25609795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 22887376 - 22887481
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    ||||||||||||| ||||||  ||||| ||||    ||||||  ||||||  |||||||||||||| ||||||||||||||| |||||  ||||| ||||    
T  22887376 aaaacagcaaaagtacaccttcaaacggtcgccacagaccccgacacgactgcccccaagcacccgaacacggagcaacaagcatgttggcctgtccagg 22887475  T
Q  132 gcgcct 137  Q
    ||||||    
T  22887476 gcgcct 22887481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 32 - 218
Target Start/End: Original strand, 29505 - 29691
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||||||||||||||||| ||||||||||| | |||| ||||| ||| ||||||||||||||||| |||||||||||||||| |||||  ||||| || |    
T  29505 aaaacagcaaaagaacacttcaaaacgatcacctagggcccctacaccaccacccccaagcacccagacacggagcaacaagcatgttgccctgtccaag 29604  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctgagctactgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaa 218  Q
    |||||||||||||  |||||||||||||||||||   |||||||||||||||| | ||| |||||| ||||||||||||||||||||    
T  29605 gcgcctagcgctagcagtggggcgcccagcgctggcttactgacttgtgggcgcctagcgcccttgctcaggcgcagcgctccgtaa 29691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 17472433 - 17472231
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcct 124  Q
    |||||| |||||||||||| ||||| ||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||| |||||  |||    
T  17472433 gtaggtgaaaacagcaaaataacacttcaaaacgatcgcctaggaccctcacacgaccacccccaagcacccggacacggagcaacaagcatgttgccct 17472334  T
Q  125 gtgcagggcgcctagcgctattagtggggcgcccagcgctgagct-actgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcg 223  Q
    ||     |||||||||||||  ||| ||||||||||||||| |||  |||||||||||||| | ||| |||||| |||||||||||||||||||||||||    
T  17472333 gtctgaagcgcctagcgctagcagtagggcgcccagcgctg-gctccctgacttgtgggcgcctagcgcccttgttcaggcgcagcgctccgtaaacgcg 17472235  T
Q  224 cgtt 227  Q
    ||||    
T  17472234 cgtt 17472231  T

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Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 32 - 222
Target Start/End: Complemental strand, 4200664 - 4200474
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||||| ||||||||||| ||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||| |||||  |||||   ||    
T  4200664 aaaacaacaaaagaacacttcaaaacgatcgcctaggaccctcacacgaccacccccaagcacccggacacggagcaacaagcatgttaccctgtctggg 4200565  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctgagctactgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgc 222  Q
    |||||| ||||||  ||||||||||||| |||||   | |||||||||||||| | ||| |||||| ||||||||||||||||||||||||    
T  4200564 gcgcctggcgctagcagtggggcgcccaacgctggcttcctgacttgtgggcgcctagcgcccttgctcaggcgcagcgctccgtaaacgc 4200474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 16535770 - 16535855
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  16535770 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 16535855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 37052317 - 37052402
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  37052317 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 37052402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 25004410 - 25004543
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    ||||||| |||||||||| ||||||||||||| |||||||||| |||||| ||||||||||||||| ||| ||||||||||| |||||  ||||| ||||    
T  25004410 aaaacagaaaaagaacacttcaaaacgatcgcctaggacccctacacgactacccccaagcacccgaacatggagcaacaagcatgttgccctgtccagg 25004509  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctg 165  Q
    |||||| |||| |  ||||  |||||||||||||    
T  25004510 gcgcctggcgccaggagtgtagcgcccagcgctg 25004543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 25901031 - 25900946
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  25901031 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcatgaccacccccaagcacccggacacggaacaac 25900946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 227
Target Start/End: Original strand, 2031227 - 2031422
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||||||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||      ||| |||||| | ||    
T  2031227 aaaacagcaaaagaacactttaaaacgatcgcctaggacccctacacgaccacccccaagcacccggacacggaacaacgttgtcgttgtcctgtcctgg 2031326  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctgagct-actgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcgcgtt 227  Q
    |||| | ||||||   |||  ||||| |||||| |||| |||||| |||||||| | ||| ||||||  ||||||||||||| ||||||||||||||    
T  2031327 gcgcttggcgctagaggtgtagcgcctagcgct-agctcactgacatgtgggcgcctagcgcccttgtgcaggcgcagcgcttcgtaaacgcgcgtt 2031422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 20622543 - 20622628
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||  ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||    
T  20622543 gtaggtgaaaacagcaaataaacacttcaaaacgatctcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 20622628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 21234217 - 21234132
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| |||||| |||||| |||||||| | |||||||||||||||||||||||||||||| ||||    
T  21234217 gtaggtgaaaacagcaaaagaacacttcaaaatgatcgcctaggaccctttcacgaccacccccaagcacccggacacggaacaac 21234132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 13911702 - 13911504
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcct 124  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||   ||||||||||||||||||| |||||||||||||||||| |||||  |||    
T  13911702 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggaccctcacacgaccacccccaagcactcggacacggagcaacaagcatgttaccct 13911603  T
Q  125 gtgcagggcgcctagcgctattagtggggcgcccagcgctgagctactgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcg 223  Q
    ||  ||||||||| |||||   |||||||||||||||||||   | |||||||||||||| | ||| |||||| ||||||||||| |||||| ||||||    
T  13911602 gtctagggcgcctggcgctggcagtggggcgcccagcgctggcttcctgacttgtgggcgcctagcgcccttgctcaggcgcagcactccgttaacgcg 13911504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 7292426 - 7292511
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  7292426 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 7292511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 11515801 - 11515886
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  11515801 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 11515886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 15442254 - 15442169
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  15442254 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 15442169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 30262819 - 30262734
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  30262819 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcactaccacccccaagcacccggacacggaacaac 30262734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 32 - 218
Target Start/End: Original strand, 813 - 999
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||||||||||||||||  ||||||||||||| ||||||||    | ||||||||||||||||||||||||| ||||||||| |||||  ||||| ||||    
T  813 aaaacagcaaaagaacaaatcaaaacgatcgcctaggaccctcagaagaccacccccaagcacccggacacgaagcaacaagcatgttgccctgtccagg 912  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctgagctactgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaa 218  Q
    ||||||||||||   ||| |||||||||||||||   |||||||||||||||| |  ||||||||| |||||||||||||| |||||    
T  913 gcgcctagcgctcgaagtagggcgcccagcgctggcttactgacttgtgggcgcctggcacccttgctcaggcgcagcgcttcgtaa 999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 227
Target Start/End: Complemental strand, 14123 - 13928
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||| ||||||||||||| ||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||| |||||  |||||  ||     
T  14123 aaaatagcaaaagaacacttcaaaacgatcgcctaggaccctcacacgaccacccccaagcacccggacacggagcaacaagcatgttgccctgtctaga 14024  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctgagctac-tgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcgcgtt 227  Q
    |||||| ||||||  |||||| ||||| |||||| ||| | ||||||||||||| | ||| |||||| ||||||| |||||||||||||||| ||||    
T  14023 gcgcctggcgctagcagtgggtcgcccggcgctg-gctccttgacttgtgggcgcctagcgcccttgctcaggcgtagcgctccgtaaacgcacgtt 13928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 227
Target Start/End: Original strand, 9794811 - 9795006
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||||||||||||||||| ||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||| || ||  |||||   ||    
T  9794811 aaaacagcaaaagaacacttcaaaacgatcgcctaggaccctcacacgaccacccccaagcacccggacacggagcaacaagcattttgccctgtctggg 9794910  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctgagct-actgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcgcgtt 227  Q
    |||||| ||||||  ||||||||||  |||| || |||  |||||||||||||| | |||  ||||| ||||||||||||||||||||| |||||||    
T  9794911 gcgcctggcgctagcagtggggcgcttagcgttg-gctccctgacttgtgggcgcctagcggccttgctcaggcgcagcgctccgtaaatgcgcgtt 9795006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 214
Target Start/End: Original strand, 34394671 - 34394853
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||      ||| |||||| | ||    
T  34394671 aaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaacgttcccgttgtcctgtcctgg 34394770  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctgagct-actgacttgtgggcgtccagcacccttggtcaggcgcagcgctcc 214  Q
    |||||| ||||||   |||  ||||| || ||| |||| |||||| |||||||| | |||||||||| ||||||||||||||||    
T  34394771 gcgcctggcgctaggggtgcagcgcctagtgct-agctcactgacatgtgggcgcctagcacccttgctcaggcgcagcgctcc 34394853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 10488135 - 10488220
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  10488135 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 10488220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 16328616 - 16328531
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  16328616 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 16328531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 26679605 - 26679690
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||   |||||||||||||||||||||||||||||| ||||    
T  26679605 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggaccctcacacgaccacccccaagcacccggacacggaacaac 26679690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 218
Target Start/End: Complemental strand, 34196875 - 34196689
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||||||||||||||||| ||||||||||| | || ||||||| |||||||||||||||||||||||||||| | ||||   |   || |||||| | ||    
T  34196875 aaaacagcaaaagaacacttcaaaacgatcacctaagacccctacacgaccacccccaagcacccggacacgaaacaacgtttccattgtcctgtcctgg 34196776  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctgagct-actgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaa 218  Q
    |||||| ||||||   |||  | ||| |||||| |||| |||||| |||||||| | ||| |||||| ||||||||||||||||||||    
T  34196775 gcgcctggcgctagaggtgcagtgcctagcgct-agctcactgacatgtgggcgcctagcgcccttgctcaggcgcagcgctccgtaa 34196689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 19558939 - 19559017
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||| ||||    
T  19558939 aaaacagcaaaagaacacttcaaaacgatcgcctaggacccctacacgaacacccccaagcacccgaacacggaacaac 19559017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 49071346 - 49071479
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    ||||||||||||| |||| |  ||||| |||||  |||||||| ||||||  |||||||||||||| | |||||||||||||  ||||  ||||| ||||    
T  49071346 aaaacagcaaaagtacactttcaaacggtcgcaacggacccctacacgactgcccccaagcacccgaaaacggagcaacaagcgtgttgccctgtccagg 49071445  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctg 165  Q
    |||||| |||| |  ||||  |||||||||||||    
T  49071446 gcgcctggcgccaggagtgcagcgcccagcgctg 49071479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 16225782 - 16225724
Alignment:
Q  84 cccccaagcacccggacacggagcaacaagtatgttctcctgtgcagggcgcctagcgc 142  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||  ||||||||| ||||    
T  16225782 cccccaatcacccggacacggagcaacaagtgtgttgccctgtctagggcgcctggcgc 16225724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 26368 - 26453
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  26368 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 26453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 22113 - 22198
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  22113 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccgaacatggaacaac 22198  T

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Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 14907130 - 14907045
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14907130 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 14907045  T

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Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 23819644 - 23819729
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  23819644 gtaggtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 23819729  T

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Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 20014584 - 20014669
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  20014584 gtaggtgaaaacagcaaaggaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacacggaacaac 20014669  T

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Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 25601429 - 25601516
Alignment:
Q  23 aggtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    ||||| || |||||||||||||||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||    
T  25601429 aggtaagtgaaaacagcaaaagaacacttcaaaacgatcgcctaggacccctacacgaccagccccaagcacccggacacggaacaac 25601516  T

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Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 51452076 - 51452161
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||    
T  51452076 gtaggtgaaaacagcaaaagaacacttcaaaacgatcacctaggacccctgcacgaccacccccaagcacccggacacggaacaac 51452161  T

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Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 227
Target Start/End: Complemental strand, 2421674 - 2421479
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcagg 131  Q
    |||||||||||||||||| ||||||||||||| ||||||     |||| ||||||||||||||||| ||||||||||||||| |||||  |||||   ||    
T  2421674 aaaacagcaaaagaacacttcaaaacgatcgcctaggacattcacacgtccacccccaagcacccgaacacggagcaacaagcatgttgccctgtctggg 2421575  T
Q  132 gcgcctagcgctattagtggggcgcccagcgctgagctactgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcgcgtt 227  Q
    |||||| ||||||   | | |||||||| ||||||    |||||||||||||| | ||| |||||   |||||||||||||||||||||| |||||    
T  2421574 gcgcctggcgctagaggggaggcgcccaacgctgactccctgacttgtgggcgcctagcgcccttatgcaggcgcagcgctccgtaaacgtgcgtt 2421479  T

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Target: scaffold0269 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 12524 - 12597
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacgga 105  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  12524 aaaacagcaaaagaacacttcaaaacgatcgcctaggacccctgtacgaccacccccaagcacccggacacgga 12597  T

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Target: scaffold0124 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 2272 - 2187
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  2272 gtaggtgaaaacagcaaaggaacacttcaaaacgatcgcctaggacccctgcacgaccaccctcaagcacccggacacggaacaac 2187  T

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Target: scaffold0078 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 37919 - 37842
Alignment:
Q  25 gtaggtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacac 102  Q
    |||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37919 gtaggtgaaaacagcaaaaaaacacttcaaaacgatcgcctaggacccctgcacgaccacccccaagcacccggacac 37842  T

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Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 15005576 - 15005498
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||    
T  15005576 aaaacagcaaaagaacacttcaaaacgatcgcctaggacccctacacgaccacccccaagcacccgaacacggaacaac 15005498  T

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Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 26506518 - 26506588
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacac 102  Q
    |||||||||||||||||| ||||||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  26506518 aaaacagcaaaagaacacttcaaaacgatcgcctaggacccctacacgactacccccaagcacccggacac 26506588  T

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Target: scaffold0021 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 22717 - 22639
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| | |||||||||||| ||||    
T  22717 aaaacagcaaaagaacacttcaaaacgatcgcctaggacccctacacgaccacccccaaactcccggacacggaacaac 22639  T

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Target: scaffold0009 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 227
Target Start/End: Original strand, 271449 - 271643
Alignment:
Q  32 aaaacagcaaaagaa-cacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaagtatgttctcctgtgcag 130  Q
    |||||||||||| || ||| | ||||||||||| ||||||||||||  ||||||||||||||||||||||||||| ||||      ||| |||||| | |    
T  271449 aaaacagcaaaaaaaacacttaaaaacgatcgcctaggacccctgc--gaccacccccaagcacccggacacggaacaacgttcccgttgtcctgtcctg 271546  T
Q  131 ggcgcctagcgctattagtggggcgcccagcgctgagc-tactgacttgtgggcgtccagcacccttggtcaggcgcagcgctccgtaaacgcgcgtt 227  Q
    ||||||| ||||||   |||  ||||| |||||| |||  |||||| |||||||| | ||| |||||| |||||||||||||||||||||||||||||    
T  271547 ggcgcctggcgctaggggtgaagcgcctagcgct-agcacactgacatgtgggcgcctagcgcccttgttcaggcgcagcgctccgtaaacgcgcgtt 271643  T

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Target: scaffold0009; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 254982 - 254900
Alignment:
Q  29 gtaaaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaaca 111  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||| ||||||   ||||||||||||| ||||||| |||||    
T  254982 gtaaaaacagcaaaagaacatttcaaaatgatcgcataggacccctacacgacttgccccaagcacccgaacacggaacaaca 254900  T

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Target: scaffold0075 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 4360 - 4426
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccgg 98  Q
    |||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||| ||||||    
T  4360 aaaacagcaaaagaacacttcaaaacgattgcctaggacccctacacgaccacccccaagtacccgg 4426  T

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Target: scaffold0063 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 44792 - 44714
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    |||||||||||||||||  |||||||||| || |||||| ||| |||||||||||||||| ||||| ||||||| ||||    
T  44792 aaaacagcaaaagaacatttcaaaacgatagcctaggactcctacacgaccacccccaagaacccgaacacggaacaac 44714  T

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Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 5460 - 5541
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaacaag 113  Q
    ||||||||||||| |||||| |||||| |||||  |||||||| |||| | ||||||||||||||| ||| |||||||||||    
T  5460 aaaacagcaaaagtacaccttaaaacggtcgcaacggacccctacacgtctacccccaagcacccgaacatggagcaacaag 5541  T

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Target: scaffold0079 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 4508 - 4430
Alignment:
Q  32 aaaacagcaaaagaacacctcaaaacgatcgcataggacccctgcacgaccacccccaagcacccggacacggagcaac 110  Q
    ||||||| |||||||||| |||||| |||||  | |||||| |  ||||| ||| ||||||||||||||||||| ||||    
T  4508 aaaacaggaaaagaacacttcaaaatgatcgtctgggacccttatacgactacctccaagcacccggacacggaacaac 4430  T

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