View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7256_low_12 (Length: 298)
Name: NF7256_low_12
Description: NF7256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7256_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 9 - 290
Target Start/End: Original strand, 22945134 - 22945415
Alignment:
| Q |
9 |
agtagtcatccaaaagatttatagacacatgtgtgaaatttatagcctgaaaagtaagtcatggagaaaactcgatgtcgatatgccttgtcgtgataca |
108 |
Q |
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||||||||| | ||||||||||| | || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22945134 |
agtagtcatgccaaagatttataaaaacttgtgggaaatttatagcctgaaaagtaagtcatggagaaaactcgatgtcgatatgccttgtcgtgataca |
22945233 |
T |
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| Q |
109 |
aacattgatgatgtgtacatgaatggcatgtgccattggtggggaataagaaataatggagagtatttggtgtcatttgatttgagcaacgaagtattcc |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
22945234 |
aacattgatgatgtgtacatgaatggcatgtgccattggtggggaataagaaataatggagagtatttggtgtcatttgatttgagcgacgaagtattcc |
22945333 |
T |
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| Q |
209 |
ttacaactcatgtacctcttgatatgtatgttttttctaaatatgttgagagacacctgacagtgttaaatatgttcatttc |
290 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22945334 |
ttacaactcaagtacctcttgatatgtatgttttttctaaatatgttgagagacacctgacagtgttaaatatgttcatttc |
22945415 |
T |
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