View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7256_low_9 (Length: 337)
Name: NF7256_low_9
Description: NF7256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7256_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 20 - 324
Target Start/End: Complemental strand, 19124336 - 19124033
Alignment:
| Q |
20 |
aatagtatagtagtaattgaaaagaaagtgaaaaatctttctggacttcaatgttctgaacgtttgccaccaattgatatagatattttccactacggat |
119 |
Q |
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| T |
19124336 |
aatagtatagtagtaattgaaaagaaagtgaaaaatctttctggacttcaatgttctgaacgtttgccaccaattgatatagatattttccactacggat |
19124237 |
T |
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| Q |
120 |
gtttcctagagagaagaaatttcccccaccataatgatatatgagattaatgtaggagctagaatcctaatttcctttctgtcgtgacattttttgttat |
219 |
Q |
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| T |
19124236 |
gtttcctagagagaagaaatttcccccaccataatgatatatgagattaatgtaggagcaagaatcctaatttcctttctgtcgtgacattttttgttat |
19124137 |
T |
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| Q |
220 |
caaaatttatttctatttattgatgggaaattttatattaattcaattgtgactaaatgtgtatacggctaaacttttatgtaagtgttggacacgagga |
319 |
Q |
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| T |
19124136 |
caaaatttatttctatttattgatgggaaattttatattaattcaattgtgact-aatgtgtatacagctaaacttttatataagtgttggacacgagga |
19124038 |
T |
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| Q |
320 |
tatat |
324 |
Q |
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||||| |
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| T |
19124037 |
tatat |
19124033 |
T |
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