View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7257_high_26 (Length: 259)
Name: NF7257_high_26
Description: NF7257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7257_high_26 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 13 - 259
Target Start/End: Original strand, 38997056 - 38997304
Alignment:
| Q |
13 |
aatatgaaccacaatattcatactgatactactactaacttactnnnnnnnn--gggacgcttggccatatcctgaattcagtggaaatgagctcactgg |
110 |
Q |
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| T |
38997056 |
aatatgaaccacaatattcatactgatactactactaccttactaaaaaaaaaagggacgcttggccatatcctgaattcagtggaaatgagctcactgg |
38997155 |
T |
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| Q |
111 |
caccatattctgttgggacttgcctcacctccttgcagccccaaaaacttaaccatttgaattcactaacaacaacatgttctgtccaagtccaacaaca |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38997156 |
caccatattctgttgggacttgcctcacctccttgcagccccaaaaacttaaccatttgaattcactaacaacaacatgttctgtccaagtccaacaaca |
38997255 |
T |
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| Q |
211 |
accaccagttcttgtacaaaaggataatcaattgaaaagaagagaagca |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38997256 |
accaccagttcttgtacaaaaggataatcaattgaaaagaagagaagca |
38997304 |
T |
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