View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7257_high_28 (Length: 248)
Name: NF7257_high_28
Description: NF7257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7257_high_28 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 233
Target Start/End: Original strand, 18982669 - 18982885
Alignment:
| Q |
17 |
caaaaattacttgattaagttctaaaaagacgaagccatcttcttctgtttaatcaagtcttcgcaacaggtattcaacctgcacttcttttgtgagagg |
116 |
Q |
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| T |
18982669 |
caaaaattacttgattaagttctaaaaagacgaagccatcttcttctgtttaatcaagtcttcgcaacaggtattcaacctgcacttcttttgtgagagg |
18982768 |
T |
|
| Q |
117 |
cattatccatttaccataaagattgccaatcaaacctgacttgattctatatacaggatcagctacatcaccagcttcattgatctttacctcttgacta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18982769 |
cattatccatttaccataaagattgccaatcaaacctgacttgattctatatacaggatcagctacatcaccagcttcattgatctttacctcttgacta |
18982868 |
T |
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| Q |
217 |
aatgttcttgccttcat |
233 |
Q |
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||||||||||||||||| |
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| T |
18982869 |
aatgttcttgccttcat |
18982885 |
T |
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