View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7257_low_15 (Length: 389)

Name: NF7257_low_15
Description: NF7257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7257_low_15
NF7257_low_15
[»] chr2 (25 HSPs)
chr2 (1-370)||(17471624-17471995)
chr2 (8-52)||(34080182-34080226)
chr2 (8-52)||(9671260-9671304)
chr2 (8-52)||(10543781-10543825)
chr2 (8-52)||(10546244-10546288)
chr2 (8-52)||(14530401-14530445)
chr2 (8-50)||(14444809-14444851)
chr2 (6-51)||(3633719-3633764)
chr2 (8-52)||(8455326-8455370)
chr2 (8-52)||(21779271-21779315)
chr2 (8-52)||(23488564-23488608)
chr2 (9-53)||(24859997-24860041)
chr2 (8-48)||(34766336-34766376)
chr2 (8-52)||(40579759-40579803)
chr2 (8-52)||(41409943-41409987)
chr2 (8-51)||(5841111-5841154)
chr2 (14-52)||(124924-124962)
chr2 (8-50)||(8575976-8576018)
chr2 (11-53)||(11514519-11514561)
chr2 (8-50)||(14544147-14544189)
chr2 (14-52)||(22371199-22371237)
chr2 (8-49)||(24890492-24890533)
chr2 (8-52)||(25079727-25079771)
chr2 (8-52)||(36871573-36871616)
chr2 (8-52)||(44643604-44643648)
[»] chr8 (28 HSPs)
chr8 (8-52)||(20284079-20284123)
chr8 (8-52)||(21070707-21070751)
chr8 (6-52)||(39461004-39461050)
chr8 (8-52)||(16013537-16013581)
chr8 (8-52)||(7136537-7136581)
chr8 (8-52)||(12625971-12626015)
chr8 (8-52)||(12670260-12670304)
chr8 (8-48)||(18595919-18595959)
chr8 (8-52)||(26102598-26102642)
chr8 (8-52)||(27507991-27508035)
chr8 (8-48)||(28817640-28817680)
chr8 (8-52)||(30454107-30454151)
chr8 (8-52)||(35261760-35261804)
chr8 (8-52)||(44530230-44530274)
chr8 (13-52)||(27468102-27468141)
chr8 (8-50)||(8897776-8897818)
chr8 (14-52)||(18164770-18164808)
chr8 (8-50)||(29877175-29877217)
chr8 (8-50)||(36720877-36720919)
chr8 (11-52)||(16225105-16225146)
chr8 (8-52)||(2677621-2677665)
chr8 (8-52)||(6760905-6760949)
chr8 (8-52)||(13160782-13160826)
chr8 (6-38)||(20869524-20869556)
chr8 (8-52)||(20870006-20870050)
chr8 (8-52)||(25250605-25250649)
chr8 (8-52)||(28407484-28407528)
chr8 (8-52)||(45071345-45071389)
[»] chr5 (24 HSPs)
chr5 (8-53)||(25622541-25622586)
chr5 (8-52)||(8169994-8170038)
chr5 (8-52)||(16957395-16957439)
chr5 (8-52)||(38879664-38879708)
chr5 (8-51)||(12006339-12006382)
chr5 (6-50)||(7097772-7097816)
chr5 (11-59)||(13774949-13774997)
chr5 (8-52)||(16028634-16028678)
chr5 (8-52)||(24448971-24449015)
chr5 (8-52)||(32703503-32703547)
chr5 (8-52)||(43574687-43574731)
chr5 (8-51)||(21784343-21784386)
chr5 (8-49)||(19142956-19142997)
chr5 (11-52)||(32354211-32354252)
chr5 (8-52)||(4619114-4619158)
chr5 (8-52)||(7368477-7368521)
chr5 (8-52)||(10943855-10943898)
chr5 (8-52)||(13801777-13801821)
chr5 (8-52)||(16880657-16880701)
chr5 (8-52)||(30877574-30877618)
chr5 (8-52)||(34154824-34154868)
chr5 (8-52)||(39801597-39801641)
chr5 (8-52)||(41014399-41014443)
chr5 (8-52)||(43334286-43334329)
[»] chr1 (28 HSPs)
chr1 (8-53)||(27474384-27474429)
chr1 (8-52)||(4349742-4349786)
chr1 (8-52)||(4587573-4587617)
chr1 (8-52)||(50606507-50606551)
chr1 (11-52)||(14617145-14617186)
chr1 (8-52)||(18944749-18944794)
chr1 (10-59)||(19701677-19701726)
chr1 (6-55)||(25554749-25554798)
chr1 (8-53)||(35253196-35253241)
chr1 (8-53)||(42304216-42304261)
chr1 (8-52)||(10668331-10668375)
chr1 (8-52)||(34725108-34725152)
chr1 (8-52)||(35005229-35005273)
chr1 (8-52)||(45402200-45402244)
chr1 (8-52)||(46247963-46248007)
chr1 (8-52)||(46991908-46991952)
chr1 (8-51)||(6925204-6925247)
chr1 (8-51)||(30395737-30395780)
chr1 (8-59)||(33594134-33594185)
chr1 (10-52)||(9939570-9939612)
chr1 (6-52)||(23796567-23796613)
chr1 (8-49)||(12126850-12126891)
chr1 (8-52)||(10378745-10378789)
chr1 (8-52)||(18741967-18742011)
chr1 (8-52)||(19414541-19414585)
chr1 (8-52)||(20004100-20004144)
chr1 (8-48)||(27201753-27201793)
chr1 (8-52)||(30555219-30555263)
[»] scaffold0057 (2 HSPs)
scaffold0057 (8-52)||(46912-46956)
scaffold0057 (8-48)||(24786-24826)
[»] chr6 (13 HSPs)
chr6 (8-52)||(29355865-29355909)
chr6 (8-52)||(12221924-12221969)
chr6 (8-52)||(1347043-1347087)
chr6 (8-52)||(1354767-1354811)
chr6 (8-52)||(6808476-6808520)
chr6 (8-52)||(12892090-12892134)
chr6 (8-52)||(14975100-14975144)
chr6 (8-52)||(26097239-26097283)
chr6 (8-51)||(23930138-23930181)
chr6 (9-52)||(25557805-25557848)
chr6 (10-52)||(10734915-10734957)
chr6 (8-52)||(11395842-11395886)
chr6 (8-52)||(12885994-12886038)
[»] chr4 (36 HSPs)
chr4 (8-52)||(20639668-20639712)
chr4 (8-52)||(23501870-23501914)
chr4 (8-52)||(32484314-32484358)
chr4 (8-52)||(38755918-38755962)
chr4 (8-52)||(40553947-40553991)
chr4 (8-52)||(44363140-44363184)
chr4 (6-49)||(30639458-30639501)
chr4 (9-52)||(50555666-50555709)
chr4 (8-50)||(30690188-30690230)
chr4 (9-51)||(54730334-54730376)
chr4 (10-55)||(51865045-51865090)
chr4 (8-52)||(11394933-11394977)
chr4 (8-52)||(11404660-11404704)
chr4 (8-52)||(20225063-20225107)
chr4 (8-52)||(20225157-20225201)
chr4 (8-52)||(25629130-25629174)
chr4 (8-52)||(29207908-29207952)
chr4 (8-48)||(33836501-33836541)
chr4 (12-52)||(35532077-35532117)
chr4 (8-52)||(38786690-38786734)
chr4 (9-52)||(11054158-11054201)
chr4 (9-52)||(16408611-16408654)
chr4 (8-51)||(30352591-30352634)
chr4 (8-46)||(14983915-14983953)
chr4 (11-53)||(40915912-40915954)
chr4 (8-49)||(5648339-5648380)
chr4 (8-49)||(20908649-20908690)
chr4 (8-52)||(54175145-54175190)
chr4 (8-52)||(6430636-6430680)
chr4 (8-48)||(8820589-8820629)
chr4 (9-53)||(10277766-10277810)
chr4 (8-48)||(20405170-20405210)
chr4 (8-52)||(21647047-21647091)
chr4 (8-52)||(25388257-25388301)
chr4 (8-52)||(35567251-35567295)
chr4 (8-48)||(47482864-47482904)
[»] chr3 (28 HSPs)
chr3 (8-52)||(13628800-13628844)
chr3 (8-52)||(40272822-40272866)
chr3 (8-52)||(54484794-54484838)
chr3 (8-52)||(353359-353403)
chr3 (8-52)||(516515-516559)
chr3 (8-52)||(1217191-1217235)
chr3 (8-52)||(10484626-10484670)
chr3 (8-52)||(13730612-13730656)
chr3 (8-52)||(24851311-24851355)
chr3 (8-52)||(30452898-30452942)
chr3 (8-52)||(34771374-34771418)
chr3 (8-52)||(39203617-39203661)
chr3 (8-52)||(45948848-45948892)
chr3 (10-52)||(5173729-5173771)
chr3 (14-52)||(47624208-47624246)
chr3 (8-50)||(54374357-54374399)
chr3 (8-49)||(29366733-29366774)
chr3 (8-52)||(46421044-46421089)
chr3 (8-52)||(829452-829496)
chr3 (8-52)||(14987062-14987106)
chr3 (8-52)||(15797323-15797367)
chr3 (8-52)||(22122927-22122971)
chr3 (8-52)||(22609868-22609912)
chr3 (8-52)||(25517180-25517224)
chr3 (12-52)||(31592954-31592994)
chr3 (8-52)||(45786224-45786268)
chr3 (8-52)||(49013483-49013527)
chr3 (12-52)||(52926229-52926269)
[»] chr7 (18 HSPs)
chr7 (8-58)||(21566517-21566567)
chr7 (9-50)||(45018935-45018976)
chr7 (8-52)||(2541029-2541073)
chr7 (8-52)||(7879719-7879763)
chr7 (8-52)||(21172019-21172063)
chr7 (8-52)||(32758340-32758384)
chr7 (8-52)||(35334826-35334870)
chr7 (8-52)||(42391110-42391154)
chr7 (8-52)||(42805607-42805651)
chr7 (8-52)||(48735132-48735176)
chr7 (11-50)||(42495874-42495913)
chr7 (8-49)||(10693086-10693127)
chr7 (8-49)||(18512466-18512507)
chr7 (8-53)||(38262205-38262250)
chr7 (8-52)||(18747568-18747612)
chr7 (8-52)||(27889326-27889370)
chr7 (8-52)||(31591119-31591163)
chr7 (8-52)||(47716542-47716586)
[»] scaffold0311 (1 HSPs)
scaffold0311 (8-49)||(10891-10932)
[»] scaffold0180 (1 HSPs)
scaffold0180 (8-53)||(24142-24187)
[»] scaffold0168 (1 HSPs)
scaffold0168 (8-52)||(30658-30702)
[»] scaffold0015 (1 HSPs)
scaffold0015 (8-52)||(48644-48688)
[»] scaffold1176 (1 HSPs)
scaffold1176 (8-50)||(1599-1641)
[»] scaffold0018 (1 HSPs)
scaffold0018 (9-50)||(72879-72920)
[»] scaffold0258 (1 HSPs)
scaffold0258 (8-52)||(13034-13078)


Alignment Details
Target: chr2 (Bit Score: 337; Significance: 0; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 17471624 - 17471995
Alignment:
Q  1 atgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccggactacccctatgaaagtactttaactttctttcatcttttattattaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17471624 atgatgagaccccttccctgaccctgcctatgcgggagttttagtgcaccggactacccctatgaaattactttaactttctttcatcttttattattaa 17471723  T
Q  101 cagcata--ccatctataagtgcttaatacttacttggtaaagagcaagcaattcagaaatttgaaaggtgaatgaagcatagagaagctgaagcatgaa 198  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  17471724 cagcatataccatctataagtgcttaatacttacttggtaaagagcaagcaattcagaaatttgaaaggtgaaggaagcatagagaagttgaagcatgaa 17471823  T
Q  199 atcaacaactggccaacaaccaaagtgtaaacaatcatcatccacacaaacacaaacatctttagcagacaaatgatgatcctcaactctctcactatac 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17471824 atcaacaactggccaacaaccaaagtgtaaacaatcatcatccacacaaacacaaacatctttagcagacaaatgatgatcctcaactctctcactatac 17471923  T
Q  299 aaataacgcagaacaacgttaagcgcttcaaacccaacatcataatccttagcaacttccttcagttgcagc 370  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17471924 aaataacgcagaacaacgttaagcgcgtcaaacccaacatcataatccttagcaacttccttcagttgcagc 17471995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 34080182 - 34080226
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  34080182 gaccccttcccggaccctgcatatgcgggagttttagtgcaccgg 34080226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 9671260 - 9671304
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  9671260 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 9671304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 10543781 - 10543825
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  10543781 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 10543825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 10546244 - 10546288
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  10546244 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 10546288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 14530401 - 14530445
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  14530401 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 14530445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 14444809 - 14444851
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  14444809 gaccccttcccggaccctgcgtatgcgggagctttagtgcacc 14444851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 3633764 - 3633719
Alignment:
Q  6 gagaccccttcccggaccctgcctatgcgggagttttagtgcaccg 51  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||    
T  3633764 gagaccccttcccggaccccgcatatgcgggagctttagtgcaccg 3633719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 8455370 - 8455326
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||    
T  8455370 gaccccttcccggaccctgcgtatgccggagctttagtgcaccgg 8455326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 21779315 - 21779271
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  21779315 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 21779271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 23488564 - 23488608
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||    
T  23488564 gaccccttcccggaccctgcgtatgcgagagctttagtgcaccgg 23488608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 24860041 - 24859997
Alignment:
Q  9 accccttcccggaccctgcctatgcgggagttttagtgcaccgga 53  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||    
T  24860041 accccttctcggaccctgcgtatgcgggagctttagtgcaccgga 24859997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 34766336 - 34766376
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgca 48  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  34766336 gaccccttcccggaccctgcgtatgcgggagctttagtgca 34766376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 40579803 - 40579759
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||  |||||||||| |||||||||||||    
T  40579803 gaccccttcccggaccctgagtatgcgggagctttagtgcaccgg 40579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 41409943 - 41409987
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| || ||||||||||    
T  41409943 gaccccttcccggaccctgcatatgcgggagcttcagtgcaccgg 41409987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 5841111 - 5841154
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 51  Q
    ||||||||||||||||| || |||||||||| ||||||||||||    
T  5841111 gaccccttcccggaccccgcatatgcgggagctttagtgcaccg 5841154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 124962 - 124924
Alignment:
Q  14 ttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcaccgg 124924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 8575976 - 8576018
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    |||||||||||||||||||| |||| ||||| |||||||||||    
T  8575976 gaccccttcccggaccctgcgtatgtgggagctttagtgcacc 8576018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 11514519 - 11514561
Alignment:
Q  11 cccttcccggaccctgcctatgcgggagttttagtgcaccgga 53  Q
    |||||||| |||||||| |||||||||| ||||||||||||||    
T  11514519 cccttcccagaccctgcgtatgcgggagctttagtgcaccgga 11514561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 14544147 - 14544189
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    |||||||||| ||||||||| |||||||||| |||||||||||    
T  14544147 gaccccttccgggaccctgcgtatgcgggagctttagtgcacc 14544189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 22371199 - 22371237
Alignment:
Q  14 ttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgg 22371237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 24890492 - 24890533
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcac 49  Q
    |||||||||||||||||||| ||||| |||| ||||||||||    
T  24890492 gaccccttcccggaccctgcgtatgcaggagctttagtgcac 24890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 25079771 - 25079727
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||  ||| |||||||||||||    
T  25079771 gaccccttcccggaccctgcgtatgcaagagctttagtgcaccgg 25079727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 36871573 - 36871616
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||    
T  36871573 gaccccttcccggacc-tgcgtatgcgggagctttagtgcaccgg 36871616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 44643604 - 44643648
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| |||||||| ||||||||||  ||||||||||||    
T  44643604 gaccccttcccagaccctgcgtatgcgggagccttagtgcaccgg 44643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 20284123 - 20284079
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  20284123 gaccccttcccggaccctgcgtatgcgggagttttagtgcaccgg 20284079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 21070751 - 21070707
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  21070751 gaccccttcccggaccctgcgtatgcgggagttttagtgcaccgg 21070707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 39461050 - 39461004
Alignment:
Q  6 gagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  39461050 gagaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 39461004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 16013537 - 16013581
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  16013537 gaccccttcccagaccctgcctatgcgggagctttagtgcaccgg 16013581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 7136581 - 7136537
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| || |||||||||| |||||||||||||    
T  7136581 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 7136537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 12625971 - 12626015
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||    
T  12625971 gaccccctcccggaccctgcgtatgcgggagctttagtgcaccgg 12626015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 12670304 - 12670260
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  12670304 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 12670260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 18595919 - 18595959
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgca 48  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  18595919 gaccccttcccggaccctgtgtatgcgggagttttagtgca 18595959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 26102598 - 26102642
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  26102598 gaccccttcccggaccctgcttatgcgggagctctagtgcaccgg 26102642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 27507991 - 27508035
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||    
T  27507991 gaccccttcccgaaccctgcgtatgcgggagctttagtgcaccgg 27508035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 28817680 - 28817640
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgca 48  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  28817680 gaccccttcccggaccctgcgtatgcgggagctttagtgca 28817640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 30454151 - 30454107
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  30454151 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 30454107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 35261760 - 35261804
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||    
T  35261760 gaccccttcctggaccctgcgtatgcgggagctttagtgcaccgg 35261804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 44530230 - 44530274
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||    
T  44530230 gaccccttcctggaccctgcgtatgcgggagctttagtgcaccgg 44530274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 27468141 - 27468102
Alignment:
Q  13 cttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgg 27468102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 8897818 - 8897776
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    |||||||||||||||||||| |||||||||| |||| ||||||    
T  8897818 gaccccttcccggaccctgcatatgcgggagctttactgcacc 8897776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 18164808 - 18164770
Alignment:
Q  14 ttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  18164808 ttcccggaccctgcgtatgcgggagctttagtgcaccgg 18164770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 29877175 - 29877217
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  29877175 gaccccttcccggaccctgcgtatgcgggagcgttagtgcacc 29877217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 36720877 - 36720919
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    |||||||||||||||||||| ||||||| || |||||||||||    
T  36720877 gaccccttcccggaccctgcgtatgcggaagctttagtgcacc 36720919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 16225105 - 16225146
Alignment:
Q  11 cccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||| || |||||||||| |||||||||||||    
T  16225105 cccttcccggaccccgcatatgcgggagctttagtgcaccgg 16225146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 2677621 - 2677665
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||| |||||||||| |||||||  |||||||||||||||    
T  2677621 gaccccttctcggaccctgcgtatgcggatgttttagtgcaccgg 2677665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 6760905 - 6760949
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||| ||||||| || |||||||||| |||||||||||||    
T  6760905 gaccccttctcggaccccgcatatgcgggagctttagtgcaccgg 6760949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 13160782 - 13160826
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| || ||||| ||||    
T  13160782 gaccccttcccggaccctgcgtatgcgggagcttcagtgcgccgg 13160826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 20869556 - 20869524
Alignment:
Q  6 gagaccccttcccggaccctgcctatgcgggag 38  Q
    |||||||||||||||||||||| ||||||||||    
T  20869556 gagaccccttcccggaccctgcatatgcgggag 20869524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 20870006 - 20870050
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||| |||||| || |||||||||| |||||||||||||    
T  20870006 gaccccttccaggaccccgcatatgcgggagctttagtgcaccgg 20870050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 25250605 - 25250649
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||| |||| || |||||||||| |||||||||||||    
T  25250605 gaccccttcccgaaccccgcatatgcgggagatttagtgcaccgg 25250649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 28407484 - 28407528
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||| | |||||||||| |||| ||||||||    
T  28407484 gaccccttcccggaccctacgtatgcgggagctttactgcaccgg 28407528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 45071345 - 45071389
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||| ||| |||||||||| || ||||||||||    
T  45071345 gaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgg 45071389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 25622541 - 25622586
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 53  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  25622541 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgga 25622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 8170038 - 8169994
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  8170038 gaccccttcccggaccctgcatatgcgggagtttcagtgcaccgg 8169994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 16957395 - 16957439
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  16957395 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 16957439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 38879664 - 38879708
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  38879664 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 38879708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 12006382 - 12006339
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 51  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||    
T  12006382 gaccccttcccagaccctgcctatgcgggagctttagtgcaccg 12006339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 7097816 - 7097772
Alignment:
Q  6 gagaccccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||    
T  7097816 gagaccccttcccgaaccctgcgtatgcgggagctttagtgcacc 7097772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 13774949 - 13774997
Alignment:
Q  11 cccttcccggaccctgcctatgcgggagttttagtgcaccggactaccc 59  Q
    ||||| ||||||||||| |||||||||| ||||||||||||| ||||||    
T  13774949 ccctttccggaccctgcgtatgcgggagctttagtgcaccgggctaccc 13774997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 16028678 - 16028634
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  16028678 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 16028634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 24448971 - 24449015
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||    
T  24448971 gaccccttcccggaccctgcgtatgcaggagctttagtgcaccgg 24449015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 32703503 - 32703547
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  32703503 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 32703547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 43574687 - 43574731
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||    
T  43574687 gaccccttcccggaccctgcgtatgcgggagctttagagcaccgg 43574731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 21784386 - 21784343
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 51  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||    
T  21784386 gacccctttccggaccctgcgtatgcgggaggtttagtgcaccg 21784343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 19142997 - 19142956
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcac 49  Q
    |||||||||||||||| ||| |||||||||| ||||||||||    
T  19142997 gaccccttcccggaccatgcgtatgcgggagatttagtgcac 19142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 32354211 - 32354252
Alignment:
Q  11 cccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||  |||||||||| |||||||||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgg 32354252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 4619158 - 4619114
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| || |||||| ||| |||||||||||||    
T  4619158 gaccccttcccggaccccgcatatgcgagagctttagtgcaccgg 4619114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 7368477 - 7368521
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||    
T  7368477 gaccccttcccggaccctgcatatgtgggagctctagtgcaccgg 7368521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 10943898 - 10943855
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||    
T  10943898 gaccccttcccggaccctg-caatgcgggagctttagtgcaccgg 10943855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 13801821 - 13801777
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| || |||||| ||| |||||||||||||    
T  13801821 gaccccttcccggaccccgcatatgcgagagctttagtgcaccgg 13801777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 16880701 - 16880657
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||| ||||||||||| ||| |||||||||| |||||||||||||    
T  16880701 gaccacttcccggaccatgcgtatgcgggagctttagtgcaccgg 16880657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 30877618 - 30877574
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||    
T  30877618 gaccccttcccggaccctgcatatgtgggagctctagtgcaccgg 30877574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 34154868 - 34154824
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| ||||||| || | |||||||||||    
T  34154868 gaccccttcccggaccctgcatatgcggtagctctagtgcaccgg 34154824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 39801597 - 39801641
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| |||||| | |||||||||| |||||||||||||    
T  39801597 gaccccttcccagaccctacgtatgcgggagctttagtgcaccgg 39801641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 41014399 - 41014443
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||| |||||| || |||||||||| |||||||||||||    
T  41014399 gaccccttcctggaccccgcatatgcgggagctttagtgcaccgg 41014443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 43334286 - 43334329
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||    
T  43334286 gaccccttcccggaccctg-cgatgcgggagctttagtgcaccgg 43334329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 27474384 - 27474429
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 53  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  27474384 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgga 27474429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 4349742 - 4349786
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  4349742 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 4349786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 4587617 - 4587573
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||||||||||||||||| || ||||||||||    
T  4587617 gaccccttcccggaccctgcctatgcgggagcttcagtgcaccgg 4587573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 50606507 - 50606551
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  50606507 gaccccttcccggaccctgcatatgcgggagctttagtgcaccgg 50606551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 14617145 - 14617186
Alignment:
Q  11 cccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  14617145 cccttcccggaccctgcatatgcgggagctttagtgcaccgg 14617186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 18944749 - 18944794
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggag-ttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  18944749 gaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgg 18944794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 19701677 - 19701726
Alignment:
Q  10 ccccttcccggaccctgcctatgcgggagttttagtgcaccggactaccc 59  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||    
T  19701677 ccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctaccc 19701726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 25554798 - 25554749
Alignment:
Q  6 gagaccccttcccggaccctgcctatgcgggagttttagtgcaccggact 55  Q
    |||||||||||||| ||||||| ||||||||||  |||||||||||||||    
T  25554798 gagaccccttcccgaaccctgcgtatgcgggagcattagtgcaccggact 25554749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 35253241 - 35253196
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 53  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||    
T  35253241 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgga 35253196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 42304261 - 42304216
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 53  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||||    
T  42304261 gaccccttcccggaccctgcgtatgtgggagctttagtgcaccgga 42304216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 10668331 - 10668375
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||| |||||| |||||||||| |||||||||||||    
T  10668331 gaccccttcccggtccctgcgtatgcgggagctttagtgcaccgg 10668375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 34725152 - 34725108
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  34725152 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 34725108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 35005229 - 35005273
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||| | |||||||||||||    
T  35005229 gaccccttcccggaccctgcgtatgcgggcgctttagtgcaccgg 35005273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 45402200 - 45402244
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||    
T  45402200 gaccccttcccagaccctgcgtatgcgggagctttagtgcaccgg 45402244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 46248007 - 46247963
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||    
T  46248007 gaccccttcccggaccctgcgtatgcgggagctttagtgtaccgg 46247963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 46991908 - 46991952
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||    
T  46991908 gaccccttcccggaccctgcgtatgtgggagctttagtgcaccgg 46991952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 6925204 - 6925247
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 51  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||    
T  6925204 gaccccttcccggtccctgcgtatgcgggagctttagtgcaccg 6925247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 30395780 - 30395737
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 51  Q
    ||||||||||||||||| || |||||||||| ||||||||||||    
T  30395780 gaccccttcccggaccccgcatatgcgggagctttagtgcaccg 30395737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 33594185 - 33594134
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccggactaccc 59  Q
    ||||||||||| |||||||| |||||||||| |||||||||| || ||||||    
T  33594185 gaccccttcccagaccctgcgtatgcgggagctttagtgcactgggctaccc 33594134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 9939570 - 9939612
Alignment:
Q  10 ccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||| |||||||||| |||||||||| |||||||||||||    
T  9939570 ccccttctcggaccctgcgtatgcgggagctttagtgcaccgg 9939612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 23796567 - 23796613
Alignment:
Q  6 gagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||| |||||||| ||||| |||| |||||||||||||    
T  23796567 gagaccccttcccagaccctgcatatgctggagctttagtgcaccgg 23796613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 12126891 - 12126850
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcac 49  Q
    |||||||||||||||||||| |||||||||| | ||||||||    
T  12126891 gaccccttcccggaccctgcatatgcgggagctgtagtgcac 12126850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 10378789 - 10378745
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||    
T  10378789 gaccccttcttggaccctgcatatgcgggagctttagtgcaccgg 10378745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 18742011 - 18741967
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| |||||||| |||||| ||| |||||||||||||    
T  18742011 gaccccttcccagaccctgcgtatgcgagagctttagtgcaccgg 18741967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 19414541 - 19414585
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||| ||||||| |||||||||| | |||||||||||    
T  19414541 gaccccttcccgtaccctgcatatgcgggagctctagtgcaccgg 19414585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 20004144 - 20004100
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| ||||| || |||||||||| |||||||||||||    
T  20004144 gaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 20004100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 27201753 - 27201793
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgca 48  Q
    |||||||||||||||| ||| |||||||||| |||||||||    
T  27201753 gaccccttcccggaccttgcgtatgcgggagctttagtgca 27201793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 30555219 - 30555263
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||| |||||||||| |||||| ||| |||||||||||||    
T  30555219 gaccccttcacggaccctgcgtatgcgagagctttagtgcaccgg 30555263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 46912 - 46956
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  46912 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 46956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 24826 - 24786
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgca 48  Q
    |||||||||||| ||||||| |||||||||| |||||||||    
T  24826 gaccccttcccgaaccctgcgtatgcgggagctttagtgca 24786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 29355909 - 29355865
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  29355909 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 29355865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 12221969 - 12221924
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggag-ttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  12221969 gaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgg 12221924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 1347043 - 1347087
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  1347043 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 1347087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 1354811 - 1354767
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  1354811 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 1354767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 6808476 - 6808520
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||  |||||||||| |||||||||||||    
T  6808476 gaccccttcccggaccctgtgtatgcgggagctttagtgcaccgg 6808520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 12892090 - 12892134
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| || |||||||||| |||||||||||||    
T  12892090 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 12892134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 14975144 - 14975100
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||| |||| || ||||||||||||||||||||||||    
T  14975144 gaccccttcccgaaccccgcatatgcgggagttttagtgcaccgg 14975100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 26097239 - 26097283
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  26097239 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 26097283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 23930181 - 23930138
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 51  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||    
T  23930181 gaccccttcacggaccctgcttatgcgggagctttagtgcaccg 23930138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 25557805 - 25557848
Alignment:
Q  9 accccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||||| |||||||||| | |||||||||||    
T  25557805 accccttcccggaccctgcatatgcgggagctctagtgcaccgg 25557848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 10734957 - 10734915
Alignment:
Q  10 ccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||| |||||||||| |||||| ||||||    
T  10734957 ccccttcccggaccctgcgtatgcgggagctttagtccaccgg 10734915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 11395842 - 11395886
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||| ||||| |||||||||| |||||| ||||||    
T  11395842 gaccccttcccggatcctgcgtatgcgggagctttagtccaccgg 11395886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 12885994 - 12886038
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| |||||||| |||| ||||| |||||||||||||    
T  12885994 gaccccttcccagaccctgcgtatgtgggagctttagtgcaccgg 12886038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 20639712 - 20639668
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  20639712 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 20639668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 23501870 - 23501914
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  23501870 gaccccttcccggaccctgcatatgcgggagctttagtgcaccgg 23501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 32484314 - 32484358
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  32484314 gaccccttcccggaccctgcatatgcgggagctttagtgcaccgg 32484358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 38755962 - 38755918
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  38755962 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 38755918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 40553991 - 40553947
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  40553991 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 40553947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 44363184 - 44363140
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  44363184 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 44363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 30639458 - 30639501
Alignment:
Q  6 gagaccccttcccggaccctgcctatgcgggagttttagtgcac 49  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  30639458 gagaccccttcccggaccctgcatatgcgggagctttagtgcac 30639501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 50555709 - 50555666
Alignment:
Q  9 accccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  50555709 accccttcccggaccctgcgtatgcaggagttttagtgcaccgg 50555666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 30690230 - 30690188
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  30690230 gaccccttcccggaccctgcgtatgcgggagctttagtgcacc 30690188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 54730334 - 54730376
Alignment:
Q  9 accccttcccggaccctgcctatgcgggagttttagtgcaccg 51  Q
    ||||||||||||||||||| |||||||||| ||||||||||||    
T  54730334 accccttcccggaccctgcgtatgcgggagctttagtgcaccg 54730376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 51865090 - 51865045
Alignment:
Q  10 ccccttcccggaccctgcctatgcgggagttttagtgcaccggact 55  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||    
T  51865090 ccccttcccggaccctgcgtatgcgggagctttattgcaccggact 51865045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 11394933 - 11394977
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||    
T  11394933 gacccctttccggaccctgcgtatgcgggagctttagtgcaccgg 11394977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 11404660 - 11404704
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||    
T  11404660 gacccctttccggaccctgcgtatgcgggagctttagtgcaccgg 11404704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 20225063 - 20225107
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  20225063 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 20225107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 20225157 - 20225201
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| || |||||||||| |||||||||||||    
T  20225157 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 20225201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 25629130 - 25629174
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||| | |||||||||| |||||||||||||    
T  25629130 gaccccttcccggaccctacatatgcgggagctttagtgcaccgg 25629174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 29207952 - 29207908
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  29207952 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 29207908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 33836541 - 33836501
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgca 48  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  33836541 gaccccttcccggaccctgcgtatgcgggagctttagtgca 33836501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 35532077 - 35532117
Alignment:
Q  12 ccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgg 35532117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 38786690 - 38786734
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  38786690 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 38786734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 11054201 - 11054158
Alignment:
Q  9 accccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||||| |||||||||| | |||||||||||    
T  11054201 accccttcccggaccctgcatatgcgggagctctagtgcaccgg 11054158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 16408654 - 16408611
Alignment:
Q  9 accccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||| || |||||||||| |||||||||||||    
T  16408654 accccttcccggaccccgcatatgcgggagctttagtgcaccgg 16408611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 30352634 - 30352591
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 51  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||    
T  30352634 gaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 30352591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 14983915 - 14983953
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtg 46  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  14983915 gaccccttcccggaccctgcgtatgcgggagctttagtg 14983953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 40915912 - 40915954
Alignment:
Q  11 cccttcccggaccctgcctatgcgggagttttagtgcaccgga 53  Q
    ||||||||||||||||| |||||||||| || |||||||||||    
T  40915912 cccttcccggaccctgcgtatgcgggagcttcagtgcaccgga 40915954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 5648339 - 5648380
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcac 49  Q
    |||||||||||||||||||| |||||||||| || |||||||    
T  5648339 gaccccttcccggaccctgcgtatgcgggagcttcagtgcac 5648380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 20908690 - 20908649
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcac 49  Q
    |||||||||||| ||||||| |||||||||| ||||||||||    
T  20908690 gaccccttcccgaaccctgcgtatgcgggagctttagtgcac 20908649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 54175145 - 54175190
Alignment:
Q  8 gaccccttccc-ggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| ||||||||| |||||||||| |||||||||||||    
T  54175145 gaccccttccccggaccctgcatatgcgggagctttagtgcaccgg 54175190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 6430680 - 6430636
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||| ||||||||||||||| |||||||||| ||||| |||||||    
T  6430680 gaccacttcccggaccctgcgtatgcgggagctttagcgcaccgg 6430636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 8820589 - 8820629
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgca 48  Q
    ||||||||||| |||||||| |||||| |||||||||||||    
T  8820589 gaccccttcccagaccctgcgtatgcgagagttttagtgca 8820629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 10277810 - 10277766
Alignment:
Q  9 accccttcccggaccctgcctatgcgggagttttagtgcaccgga 53  Q
    |||||||||| |||||||| |||||||||||| ||||| ||||||    
T  10277810 accccttcccagaccctgcatatgcgggagttctagtgaaccgga 10277766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 20405170 - 20405210
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgca 48  Q
    ||||||||||||||||| || |||||||||| |||||||||    
T  20405170 gaccccttcccggaccccgcatatgcgggagctttagtgca 20405210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 21647047 - 21647091
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| ||||| || |||||||||| |||||||||||||    
T  21647047 gaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 21647091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 25388257 - 25388301
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||  ||| |||||||||||||    
T  25388257 gaccccttcccggaccctgcgtatgcatgagctttagtgcaccgg 25388301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 35567251 - 35567295
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||| ||||||| | |||||||| |||||||||||||    
T  35567251 gaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgg 35567295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 47482904 - 47482864
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgca 48  Q
    |||||||||||||||||||| |||||||||| ||| |||||    
T  47482904 gaccccttcccggaccctgcgtatgcgggagctttggtgca 47482864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 13628844 - 13628800
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  13628844 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 13628800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 40272866 - 40272822
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  40272866 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 40272822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 54484794 - 54484838
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  54484794 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 54484838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 353403 - 353359
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| || |||||||||| |||||||||||||    
T  353403 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 353359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 516515 - 516559
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||    
T  516515 gaccccttccccgaccctgcgtatgcgggagctttagtgcaccgg 516559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 1217191 - 1217235
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  1217191 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 1217235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 10484670 - 10484626
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||    
T  10484670 gaccccttcctggaccctgcgtatgcgggagctttagtgcaccgg 10484626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 13730656 - 13730612
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| || |||||||||| |||||||||||||    
T  13730656 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 13730612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 24851355 - 24851311
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||| ||||| |||||||||| |||||||||||||    
T  24851355 gaccccttcccggatcctgcatatgcgggagctttagtgcaccgg 24851311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 30452898 - 30452942
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  30452898 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 30452942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 34771418 - 34771374
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  34771418 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 34771374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 39203617 - 39203661
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||    
T  39203617 gaccccttcccggaccttgcatatgcgggagctttagtgcaccgg 39203661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 45948892 - 45948848
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||    
T  45948892 gaccccttctcggaccctgcgtatgcgggagctttagtgcaccgg 45948848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 5173771 - 5173729
Alignment:
Q  10 ccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||| ||| |||||||||| |||||||||||||    
T  5173771 ccccttcccggaccttgcgtatgcgggagctttagtgcaccgg 5173729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 47624208 - 47624246
Alignment:
Q  14 ttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgg 47624246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 54374399 - 54374357
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    |||||||||||||||||||| |||||||||| |||||| ||||    
T  54374399 gaccccttcccggaccctgcatatgcgggagctttagttcacc 54374357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 29366774 - 29366733
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcac 49  Q
    |||||||||||||||||||| |||| ||||| ||||||||||    
T  29366774 gaccccttcccggaccctgcgtatgtgggagctttagtgcac 29366733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 46421089 - 46421044
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggag-ttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||    
T  46421089 gaccccttcccggaccctgcgtatgcgggagctttaagtgcaccgg 46421044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 829496 - 829452
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||| ||||||| ||||| |||| |||||||||||||    
T  829496 gaccccttcccgaaccctgcgtatgcaggagctttagtgcaccgg 829452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 14987062 - 14987106
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||| |||||||||| ||| |||||||||| |||||||||||||    
T  14987062 gacccattcccggaccttgcatatgcgggagctttagtgcaccgg 14987106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 15797323 - 15797367
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||    
T  15797323 gaccccttcccggaccctgcatatgtgggagctctagtgcaccgg 15797367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 22122971 - 22122927
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||| ||| | |||||||||||    
T  22122971 gaccccttcccggaccctgcatatgcgagagctctagtgcaccgg 22122927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 22609868 - 22609912
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||| ||| |||||||||| || ||||||||||    
T  22609868 gaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgg 22609912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 25517224 - 25517180
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||| ||||| ||||| |||| |||||||||||||    
T  25517224 gaccccttcccggatcctgcgtatgctggagctttagtgcaccgg 25517180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 31592954 - 31592994
Alignment:
Q  12 ccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||| |||||||||| | |||||||||||    
T  31592954 ccttcccggaccctgcatatgcgggagctctagtgcaccgg 31592994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 45786268 - 45786224
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||||||  |||| |||| |||||||||||||    
T  45786268 gaccccttcccggaccctgcgaatgctggagctttagtgcaccgg 45786224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 49013527 - 49013483
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| || || ||||||| |||||||||||||    
T  49013527 gaccccttcccggaccccgcatacgcgggagctttagtgcaccgg 49013483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 52926269 - 52926229
Alignment:
Q  12 ccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||| |||||||||| ||||| |||||||    
T  52926269 ccttcccggaccctgcgtatgcgggagctttagcgcaccgg 52926229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 21566517 - 21566567
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccggactacc 58  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||| |||||    
T  21566517 gaccccttcccgaaccctgcatatgcgggagctttagtgcaccgggctacc 21566567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 45018976 - 45018935
Alignment:
Q  9 accccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  45018976 accccttcccggaccctgcgtatgcgggagctttagtgcacc 45018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 2541073 - 2541029
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||| |||||| |||||||||| |||||||||||||    
T  2541073 gaccccttcccggtccctgcgtatgcgggagctttagtgcaccgg 2541029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 7879719 - 7879763
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| || ||||||||||    
T  7879719 gaccccttcccggaccctgcgtatgcgggagcttcagtgcaccgg 7879763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 21172063 - 21172019
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  21172063 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 21172019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 32758340 - 32758384
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  32758340 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 32758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 35334870 - 35334826
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||    
T  35334870 gaccccttcccggaccctgcgtatgcaggagctttagtgcaccgg 35334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 42391154 - 42391110
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  42391154 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 42391110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 42805607 - 42805651
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| || |||||||||| |||||||||||||    
T  42805607 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 42805651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 48735176 - 48735132
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  48735176 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 48735132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 42495913 - 42495874
Alignment:
Q  11 cccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  42495913 cccttcccggaccctgcgtatgcgggagctttagtgcacc 42495874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 10693127 - 10693086
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcac 49  Q
    |||||||||||||||||||| |||||||||| | ||||||||    
T  10693127 gaccccttcccggaccctgcatatgcgggagctctagtgcac 10693086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 18512507 - 18512466
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcac 49  Q
    |||||||||||||||||||| |||||||||| ||| ||||||    
T  18512507 gaccccttcccggaccctgcgtatgcgggagctttggtgcac 18512466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 38262250 - 38262205
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 53  Q
    |||||||||||| || |||| |||||||||| ||||||||||||||    
T  38262250 gaccccttcccgaacactgcgtatgcgggagctttagtgcaccgga 38262205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 18747568 - 18747612
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||| | ||||||| |||||||||| |||||||||||||    
T  18747568 gaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgg 18747612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 27889370 - 27889326
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| ||| || ||||||    
T  27889370 gaccccttcccggaccctgcgtatgcgggagctttggtacaccgg 27889326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 31591163 - 31591119
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||| ||| |||||||||| | |||||||||||    
T  31591163 gaccccttcccggaccttgcatatgcgggagctctagtgcaccgg 31591119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 47716542 - 47716586
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||||||||| || |||||||||| ||| |||||||||    
T  47716542 gaccccttcccggaccccgcatatgcgggagctttggtgcaccgg 47716586  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 10891 - 10932
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcac 49  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  10891 gaccccttcccggaccctgcgtatgcgggagctttagtgcac 10932  T

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Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 24187 - 24142
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 53  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||    
T  24187 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgga 24142  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 30658 - 30702
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  30658 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 30702  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 48688 - 48644
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  48688 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 48644  T

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Target: scaffold1176 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 1641 - 1599
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    ||||||||||||||||| || |||||||||| |||||||||||    
T  1641 gaccccttcccggacccggcgtatgcgggagctttagtgcacc 1599  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 72920 - 72879
Alignment:
Q  9 accccttcccggaccctgcctatgcgggagttttagtgcacc 50  Q
    ||||||||||||| ||||| |||||||||| |||||||||||    
T  72920 accccttcccggaacctgcgtatgcgggagctttagtgcacc 72879  T

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Target: scaffold0258 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 13078 - 13034
Alignment:
Q  8 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 52  Q
    ||||||||||| |||||||| |||||||| | |||||||||||||    
T  13078 gaccccttcccagaccctgcgtatgcgggggctttagtgcaccgg 13034  T

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