View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7257_low_25 (Length: 276)
Name: NF7257_low_25
Description: NF7257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7257_low_25 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 41223485 - 41223751
Alignment:
| Q |
1 |
tcatcttgcattttatgacttgtgtaattgattaatacttggtccaacnnnnnnnnnaattcatgtgtattgggccaaactgcattctaatgggaacttg |
100 |
Q |
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| T |
41223485 |
tcatcttgcattttatgacttgtgtaattgattaatacttggtccaaccttttttttaattgatgtgtattgggccaaactgcattctaatgggaacttg |
41223584 |
T |
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| Q |
101 |
cagcatgctattcacttacatcaagacatctagggttgggtcaggtcatgaccatgagaataacttaaaattggaggacaactacattagactaatagga |
200 |
Q |
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|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
41223585 |
cagcatgctattcacttaaatcaagacatctagggttgggttaggtcatgaccatgagaataacttaaaattggaggacaactgcattagactaatagga |
41223684 |
T |
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| Q |
201 |
ctcatttacctacatttttgtacaaaagtttaagaca-taaatttatgagtaattttatttatatat |
266 |
Q |
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|||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
41223685 |
ctcatttacctacacttttgtctaaaagtttaagacagtaaatttatgagtaattttatttatatat |
41223751 |
T |
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