View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7257_low_33 (Length: 225)
Name: NF7257_low_33
Description: NF7257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7257_low_33 |
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Alignment Details
Target: chr1 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 45094446 - 45094293
Alignment:
| Q |
13 |
ttggtgttcaagctgtttggatgaaaaaggttattaccaatggtgtaaaaccatctacttctgctagttcagaagctgggacttcaagtgaaattgagcc |
112 |
Q |
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| T |
45094446 |
ttggtgttcaagctgtttggatgaaaaaggttattaccaatggtgtaaaaccgtctacttctactagttcagaagctgggacttcaagtgaaattgagcc |
45094347 |
T |
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| Q |
113 |
tcaacaacaaatatgaaaa--------acaaggcaatgttaccacagtttacat |
158 |
Q |
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| T |
45094346 |
tcaacaacaaatatgaaaaataacatgacaaggcaatgttaccacagtttacat |
45094293 |
T |
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