View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7258_low_12 (Length: 271)
Name: NF7258_low_12
Description: NF7258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7258_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 263
Target Start/End: Original strand, 22486042 - 22486292
Alignment:
| Q |
13 |
aatattgtatcctaaattttagaaattttgcatatctacgtacttgtatgtacttgtactacatatctgaacttcatagactaaggttgattatttaacc |
112 |
Q |
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| T |
22486042 |
aatattgtatcctaaattttaaaatttttgcatatccacgtacttgtatgtacttgtactacatatctgaacttcataggctatggttgattatttagcc |
22486141 |
T |
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| Q |
113 |
ttgttatctacaaacatttccctacaatcctctttatttccttcatcatagacccctggttctcatcaaagatgaaagaggctgaagccgaagtgactta |
212 |
Q |
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| T |
22486142 |
ttgttatttataaacatttccctacaatccactttatttccttcatcatagacccctggttctcatcaaaggtgaaagaggctgaagctgaagtgactta |
22486241 |
T |
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| Q |
213 |
aaagcagggaagaataaaaatgttgattactagtgattctgagaaagaaag |
263 |
Q |
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|||||||||||||||||||||||||||||||||||||| || ||||||||| |
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| T |
22486242 |
aaagcagggaagaataaaaatgttgattactagtgattatgcgaaagaaag |
22486292 |
T |
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