View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7259_high_2 (Length: 214)

Name: NF7259_high_2
Description: NF7259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7259_high_2
NF7259_high_2
[»] scaffold0110 (1 HSPs)
scaffold0110 (20-195)||(4182-4357)
[»] chr6 (43 HSPs)
chr6 (21-188)||(281808-281974)
chr6 (45-182)||(2117353-2117489)
chr6 (113-165)||(3181120-3181172)
chr6 (39-181)||(5328925-5329065)
chr6 (113-195)||(29274281-29274362)
chr6 (113-194)||(22742304-22742384)
chr6 (110-182)||(2027455-2027526)
chr6 (45-145)||(28088207-28088306)
chr6 (65-165)||(31671078-31671178)
chr6 (86-165)||(3785725-3785804)
chr6 (118-181)||(34429747-34429809)
chr6 (18-164)||(8420154-8420300)
chr6 (34-187)||(9093528-9093681)
chr6 (34-144)||(10616514-10616624)
chr6 (109-182)||(1402946-1403018)
chr6 (119-168)||(5550095-5550144)
chr6 (109-162)||(5623125-5623178)
chr6 (21-101)||(2460111-2460191)
chr6 (109-181)||(4006665-4006736)
chr6 (34-165)||(4080884-4081013)
chr6 (127-195)||(8470054-8470121)
chr6 (40-195)||(9027514-9027669)
chr6 (71-179)||(10154174-10154281)
chr6 (109-180)||(2112152-2112222)
chr6 (97-160)||(10032542-10032605)
chr6 (120-195)||(10452419-10452493)
chr6 (126-181)||(24836264-24836318)
chr6 (45-164)||(30523627-30523745)
chr6 (90-193)||(33787774-33787876)
chr6 (109-195)||(4248895-4248980)
chr6 (108-194)||(10016483-10016568)
chr6 (141-195)||(24774695-24774748)
chr6 (77-182)||(4247077-4247181)
chr6 (94-187)||(24782004-24782096)
chr6 (111-188)||(31624202-31624278)
chr6 (20-165)||(33887796-33887941)
chr6 (147-195)||(2514639-2514686)
chr6 (109-145)||(4246396-4246432)
chr6 (91-195)||(6654552-6654655)
chr6 (40-140)||(7148657-7148757)
chr6 (109-165)||(25426136-25426192)
chr6 (89-165)||(28660788-28660864)
chr6 (18-62)||(32917266-32917310)
[»] chr3 (38 HSPs)
chr3 (21-193)||(38462220-38462390)
chr3 (46-165)||(23785221-23785340)
chr3 (71-194)||(40122763-40122884)
chr3 (34-191)||(36646355-36646511)
chr3 (119-195)||(20192664-20192739)
chr3 (93-188)||(24887315-24887409)
chr3 (20-139)||(43115048-43115167)
chr3 (39-181)||(54775079-54775219)
chr3 (109-182)||(36783382-36783454)
chr3 (109-165)||(2201094-2201150)
chr3 (20-163)||(14548680-14548823)
chr3 (94-170)||(25453892-25453968)
chr3 (109-183)||(20502116-20502191)
chr3 (90-165)||(23315592-23315667)
chr3 (129-188)||(49586984-49587042)
chr3 (71-165)||(24785171-24785265)
chr3 (95-165)||(31337435-31337505)
chr3 (32-130)||(37273135-37273233)
chr3 (96-145)||(20874339-20874388)
chr3 (124-181)||(42038940-42038996)
chr3 (21-61)||(2321248-2321288)
chr3 (109-162)||(33965537-33965592)
chr3 (73-179)||(2318596-2318703)
chr3 (93-160)||(23249529-23249596)
chr3 (109-188)||(28306102-28306180)
chr3 (45-160)||(41452494-41452609)
chr3 (114-188)||(1395615-1395688)
chr3 (95-165)||(1816549-1816619)
chr3 (120-193)||(2865718-2865789)
chr3 (109-163)||(19679376-19679430)
chr3 (92-166)||(21872302-21872376)
chr3 (40-145)||(1217779-1217884)
chr3 (119-164)||(3467446-3467491)
chr3 (109-162)||(33405215-33405268)
chr3 (120-165)||(54965472-54965517)
chr3 (127-195)||(8007761-8007828)
chr3 (131-187)||(15304417-15304472)
chr3 (109-181)||(24235731-24235802)
[»] chr8 (43 HSPs)
chr8 (45-193)||(4558737-4558884)
chr8 (66-194)||(12361130-12361257)
chr8 (103-182)||(27728063-27728141)
chr8 (109-192)||(33209268-33209350)
chr8 (92-165)||(4763884-4763957)
chr8 (66-163)||(28769344-28769441)
chr8 (90-195)||(29973018-29973122)
chr8 (32-164)||(30191112-30191244)
chr8 (72-188)||(1470867-1470982)
chr8 (90-165)||(6509332-6509407)
chr8 (18-165)||(6950288-6950435)
chr8 (51-182)||(11183495-11183625)
chr8 (109-195)||(35298525-35298611)
chr8 (103-165)||(34770858-34770920)
chr8 (77-156)||(43704392-43704473)
chr8 (32-165)||(39551180-39551313)
chr8 (110-194)||(3936787-3936870)
chr8 (109-181)||(8799356-8799427)
chr8 (120-195)||(10076335-10076408)
chr8 (71-131)||(10079080-10079140)
chr8 (71-131)||(30277255-30277315)
chr8 (131-195)||(35534931-35534994)
chr8 (84-144)||(44865587-44865647)
chr8 (32-131)||(8060669-8060768)
chr8 (66-193)||(9699940-9700066)
chr8 (114-181)||(26820150-26820216)
chr8 (109-160)||(30013189-30013240)
chr8 (71-166)||(42215316-42215411)
chr8 (77-159)||(11795064-11795146)
chr8 (66-160)||(26284800-26284894)
chr8 (71-165)||(31862459-31862553)
chr8 (109-163)||(35869805-35869859)
chr8 (20-62)||(40280185-40280227)
chr8 (112-194)||(42597339-42597420)
chr8 (96-165)||(31885094-31885162)
chr8 (77-182)||(39561557-39561661)
chr8 (113-165)||(787158-787210)
chr8 (118-190)||(6918236-6918307)
chr8 (66-138)||(8062322-8062394)
chr8 (113-181)||(30040598-30040664)
chr8 (71-143)||(31705073-31705145)
chr8 (18-98)||(39049305-39049385)
chr8 (109-165)||(41336693-41336749)
[»] chr5 (52 HSPs)
chr5 (40-195)||(16889672-16889826)
chr5 (72-182)||(28586777-28586886)
chr5 (39-182)||(14295456-14295598)
chr5 (23-181)||(37588322-37588479)
chr5 (64-195)||(12975284-12975413)
chr5 (71-161)||(18875331-18875421)
chr5 (34-187)||(35960359-35960510)
chr5 (63-195)||(12425508-12425639)
chr5 (20-196)||(32172589-32172764)
chr5 (114-165)||(32059642-32059693)
chr5 (133-195)||(20982207-20982268)
chr5 (23-181)||(37526161-37526318)
chr5 (92-165)||(38047886-38047959)
chr5 (20-168)||(30217045-30217192)
chr5 (45-131)||(1437611-1437697)
chr5 (112-195)||(39257438-39257519)
chr5 (137-195)||(7096203-7096260)
chr5 (113-195)||(9202800-9202881)
chr5 (117-163)||(14980471-14980517)
chr5 (110-179)||(12595789-12595857)
chr5 (39-152)||(36542260-36542373)
chr5 (134-195)||(37063147-37063207)
chr5 (40-145)||(41957430-41957535)
chr5 (113-165)||(36539712-36539764)
chr5 (111-195)||(39128576-39128659)
chr5 (109-165)||(41277398-41277454)
chr5 (126-165)||(583838-583877)
chr5 (68-187)||(3970687-3970806)
chr5 (18-164)||(6109452-6109596)
chr5 (105-144)||(8177581-8177620)
chr5 (90-165)||(15003543-15003618)
chr5 (126-181)||(35135727-35135781)
chr5 (23-181)||(37690598-37690756)
chr5 (124-195)||(38829698-38829768)
chr5 (90-193)||(38831486-38831587)
chr5 (114-168)||(19369276-19369330)
chr5 (32-165)||(26390760-26390893)
chr5 (40-117)||(18700399-18700475)
chr5 (111-164)||(18857450-18857503)
chr5 (109-165)||(26209461-26209518)
chr5 (92-165)||(37198111-37198184)
chr5 (45-145)||(2569679-2569779)
chr5 (113-193)||(8481157-8481236)
chr5 (45-165)||(10272415-10272535)
chr5 (111-182)||(14599353-14599425)
chr5 (66-181)||(15074754-15074866)
chr5 (66-194)||(18704041-18704167)
chr5 (119-195)||(19177416-19177491)
chr5 (109-165)||(26516366-26516422)
chr5 (129-181)||(29116998-29117049)
chr5 (109-165)||(35550915-35550970)
chr5 (113-161)||(41017697-41017745)
[»] chr2 (53 HSPs)
chr2 (109-196)||(17952749-17952835)
chr2 (39-164)||(9556206-9556331)
chr2 (112-165)||(33256706-33256759)
chr2 (71-182)||(6227701-6227811)
chr2 (93-195)||(12215744-12215845)
chr2 (71-165)||(22681195-22681289)
chr2 (52-191)||(1939323-1939461)
chr2 (109-165)||(5043608-5043664)
chr2 (109-165)||(11513864-11513920)
chr2 (49-165)||(43141837-43141953)
chr2 (71-165)||(7103492-7103587)
chr2 (92-195)||(28803537-28803639)
chr2 (94-195)||(33267556-33267649)
chr2 (109-195)||(13866826-13866911)
chr2 (109-195)||(18962086-18962171)
chr2 (137-195)||(32098384-32098441)
chr2 (39-161)||(33525945-33526067)
chr2 (90-158)||(3059303-3059372)
chr2 (90-195)||(5133709-5133813)
chr2 (72-193)||(25790065-25790185)
chr2 (44-165)||(28039315-28039436)
chr2 (134-195)||(33192130-33192190)
chr2 (112-165)||(33942116-33942169)
chr2 (137-194)||(37033982-37034038)
chr2 (18-115)||(41809202-41809299)
chr2 (46-165)||(14666514-14666633)
chr2 (109-160)||(18066099-18066150)
chr2 (66-165)||(18840762-18840861)
chr2 (130-181)||(18884832-18884883)
chr2 (96-195)||(34054936-34055034)
chr2 (39-193)||(42457887-42458041)
chr2 (119-161)||(3235442-3235483)
chr2 (119-165)||(4550743-4550789)
chr2 (94-160)||(13736326-13736392)
chr2 (109-195)||(15377702-15377787)
chr2 (45-195)||(25609733-25609882)
chr2 (71-193)||(30537537-30537658)
chr2 (20-57)||(6547248-6547285)
chr2 (48-125)||(7283002-7283079)
chr2 (32-165)||(9478265-9478398)
chr2 (18-131)||(11488277-11488388)
chr2 (32-144)||(30552614-30552727)
chr2 (148-193)||(31461377-31461421)
chr2 (121-182)||(31740019-31740079)
chr2 (72-165)||(42817387-42817480)
chr2 (119-179)||(9395083-9395142)
chr2 (111-163)||(9551547-9551599)
chr2 (109-145)||(25800815-25800851)
chr2 (90-150)||(26282057-26282117)
chr2 (121-193)||(29430695-29430765)
chr2 (40-132)||(32821808-32821900)
chr2 (119-163)||(37766766-37766810)
chr2 (110-165)||(43299451-43299507)
[»] chr4 (47 HSPs)
chr4 (44-182)||(24929443-24929580)
chr4 (20-193)||(4071822-4071989)
chr4 (94-188)||(44319894-44319986)
chr4 (109-188)||(54325085-54325163)
chr4 (119-195)||(30338650-30338725)
chr4 (45-160)||(24091434-24091549)
chr4 (31-194)||(45128280-45128442)
chr4 (112-179)||(53626729-53626795)
chr4 (71-165)||(7694020-7694114)
chr4 (84-174)||(30581700-30581790)
chr4 (71-181)||(49219090-49219199)
chr4 (110-188)||(55870390-55870467)
chr4 (126-195)||(11389463-11389531)
chr4 (90-158)||(18019944-18020013)
chr4 (23-163)||(23819057-23819197)
chr4 (21-101)||(27123312-27123392)
chr4 (131-195)||(36734830-36734893)
chr4 (109-165)||(46859896-46859952)
chr4 (110-165)||(13949893-13949948)
chr4 (72-163)||(30207582-30207672)
chr4 (104-195)||(32066453-32066542)
chr4 (23-165)||(6987703-6987845)
chr4 (109-187)||(18630625-18630702)
chr4 (129-195)||(19422355-19422420)
chr4 (77-163)||(21157736-21157822)
chr4 (109-163)||(24444006-24444060)
chr4 (113-195)||(29373939-29374020)
chr4 (71-165)||(31038877-31038971)
chr4 (25-82)||(2841675-2841732)
chr4 (32-165)||(2996539-2996672)
chr4 (95-164)||(3891542-3891611)
chr4 (119-195)||(8422897-8422970)
chr4 (107-188)||(21953217-21953297)
chr4 (134-195)||(32724056-32724116)
chr4 (92-165)||(32920431-32920504)
chr4 (119-164)||(42321937-42321982)
chr4 (91-152)||(42866047-42866108)
chr4 (71-144)||(43824270-43824343)
chr4 (114-195)||(50745937-50746017)
chr4 (109-165)||(927442-927498)
chr4 (109-165)||(3175917-3175973)
chr4 (96-187)||(7368090-7368181)
chr4 (73-161)||(18628555-18628643)
chr4 (113-161)||(41097295-41097343)
chr4 (134-182)||(41701514-41701561)
chr4 (109-165)||(51630077-51630133)
chr4 (71-143)||(56055739-56055810)
[»] chr7 (50 HSPs)
chr7 (111-195)||(9527140-9527223)
chr7 (109-188)||(3802187-3802265)
chr7 (109-195)||(11208386-11208471)
chr7 (24-194)||(27121557-27121718)
chr7 (23-181)||(48157082-48157239)
chr7 (20-195)||(33894560-33894738)
chr7 (110-193)||(47004026-47004108)
chr7 (71-165)||(38010680-38010774)
chr7 (21-194)||(4966094-4966266)
chr7 (20-193)||(27481253-27481425)
chr7 (111-163)||(17989073-17989125)
chr7 (95-195)||(28340878-28340977)
chr7 (110-193)||(1417203-1417285)
chr7 (34-188)||(5006484-5006635)
chr7 (92-163)||(28340427-28340498)
chr7 (90-165)||(29363484-29363559)
chr7 (109-159)||(5369739-5369789)
chr7 (90-160)||(10190766-10190836)
chr7 (111-165)||(31002727-31002781)
chr7 (39-144)||(33645939-33646044)
chr7 (66-160)||(44821930-44822024)
chr7 (119-165)||(45777229-45777275)
chr7 (94-194)||(2048075-2048172)
chr7 (34-195)||(3500940-3501099)
chr7 (109-195)||(23721438-23721528)
chr7 (109-178)||(46825052-46825120)
chr7 (110-182)||(2727409-2727480)
chr7 (109-165)||(12110326-12110382)
chr7 (71-195)||(27378838-27378960)
chr7 (109-165)||(27548229-27548285)
chr7 (71-179)||(28165044-28165151)
chr7 (119-195)||(45813238-45813313)
chr7 (40-132)||(46281119-46281211)
chr7 (18-165)||(3468580-3468727)
chr7 (124-195)||(35536044-35536114)
chr7 (71-182)||(40688996-40689106)
chr7 (66-165)||(44151485-44151584)
chr7 (38-193)||(46081972-46082129)
chr7 (43-129)||(9423576-9423662)
chr7 (113-195)||(33709384-33709466)
chr7 (148-194)||(42656453-42656498)
chr7 (141-182)||(2999141-2999181)
chr7 (118-195)||(24973881-24973957)
chr7 (95-144)||(25507336-25507385)
chr7 (134-195)||(45593792-45593852)
chr7 (139-195)||(5276161-5276216)
chr7 (90-182)||(22759136-22759227)
chr7 (18-62)||(36537977-36538021)
chr7 (71-195)||(37064230-37064356)
chr7 (137-165)||(44178999-44179027)
[»] scaffold0024 (1 HSPs)
scaffold0024 (32-195)||(27513-27675)
[»] chr1 (65 HSPs)
chr1 (40-182)||(30259465-30259607)
chr1 (66-165)||(39347972-39348071)
chr1 (110-181)||(49517021-49517091)
chr1 (71-165)||(10199418-10199512)
chr1 (40-194)||(17420141-17420294)
chr1 (113-187)||(33527199-33527272)
chr1 (73-195)||(52013834-52013956)
chr1 (109-190)||(7218122-7218202)
chr1 (91-195)||(15361648-15361753)
chr1 (20-165)||(15581220-15581365)
chr1 (86-158)||(8130409-8130481)
chr1 (109-165)||(48830124-48830180)
chr1 (20-103)||(4868428-4868510)
chr1 (66-165)||(12477292-12477391)
chr1 (126-181)||(15360845-15360899)
chr1 (74-165)||(25479547-25479638)
chr1 (77-188)||(33723398-33723508)
chr1 (66-164)||(21012757-21012855)
chr1 (66-165)||(35017540-35017641)
chr1 (94-164)||(44422666-44422736)
chr1 (119-164)||(5941505-5941550)
chr1 (108-165)||(15565879-15565936)
chr1 (109-182)||(17631149-17631221)
chr1 (109-162)||(25006082-25006135)
chr1 (34-131)||(27140478-27140575)
chr1 (92-165)||(27738211-27738284)
chr1 (66-166)||(6279364-6279464)
chr1 (109-193)||(17422986-17423070)
chr1 (114-162)||(37272639-37272687)
chr1 (121-180)||(3319992-3320051)
chr1 (129-164)||(4215339-4215374)
chr1 (110-173)||(5592734-5592797)
chr1 (66-193)||(6981431-6981557)
chr1 (109-164)||(10581125-10581180)
chr1 (74-161)||(17269220-17269307)
chr1 (119-182)||(17628549-17628611)
chr1 (109-160)||(19462814-19462865)
chr1 (109-195)||(23544687-23544773)
chr1 (90-165)||(28467337-28467411)
chr1 (71-170)||(30257644-30257743)
chr1 (70-165)||(34179881-34179976)
chr1 (109-195)||(4363680-4363764)
chr1 (110-188)||(5756735-5756812)
chr1 (39-165)||(15515507-15515633)
chr1 (71-165)||(16322815-16322909)
chr1 (79-145)||(25005815-25005881)
chr1 (49-188)||(28689440-28689580)
chr1 (113-155)||(29415642-29415684)
chr1 (134-195)||(781192-781253)
chr1 (45-182)||(3924574-3924710)
chr1 (109-182)||(4548670-4548743)
chr1 (66-143)||(6659502-6659579)
chr1 (67-180)||(12564505-12564616)
chr1 (71-144)||(23902077-23902150)
chr1 (127-188)||(45999354-45999414)
chr1 (124-165)||(47877088-47877129)
chr1 (90-131)||(51929804-51929845)
chr1 (109-165)||(10586420-10586476)
chr1 (113-193)||(21516312-21516391)
chr1 (128-164)||(28788605-28788641)
chr1 (119-191)||(29666367-29666437)
chr1 (113-165)||(30371114-30371166)
chr1 (134-194)||(35080143-35080202)
chr1 (109-165)||(45205034-45205090)
chr1 (147-195)||(48282070-48282118)
[»] scaffold0053 (1 HSPs)
scaffold0053 (113-195)||(20116-20197)
[»] scaffold0590 (1 HSPs)
scaffold0590 (134-195)||(1147-1207)
[»] scaffold0275 (1 HSPs)
scaffold0275 (134-195)||(2768-2828)
[»] scaffold0147 (1 HSPs)
scaffold0147 (35-131)||(12678-12775)
[»] scaffold0584 (1 HSPs)
scaffold0584 (71-143)||(1343-1414)
[»] scaffold0446 (1 HSPs)
scaffold0446 (71-143)||(5469-5540)


Alignment Details
Target: scaffold0110 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 4182 - 4357
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4182 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccgtaagctttctagcatagcttatta 4281  T
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4282 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 4357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 9e-26; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 281808 - 281974
Alignment:
Q  21 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaa 120  Q
    |||||||||  |||||| ||||| | |||||| |||||||||   |||| |||||||||||| | ||| ||||||| |||| ||||| ||||||||| ||    
T  281808 acttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaa 281907  T
Q  121 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
     ||||||||||| ||||||||||||   ||||||||||||||||| ||| |||||| ||||| |||||    
T  281908 cacagcttatagcttatatgaaaacaagttgactttattttatct-tttgttataggaatagcttata 281974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 2117489 - 2117353
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    |||| ||||||| |||||   |||| ||||| |||||| | ||| |||| ||||||| ||||| ||| ||||| |||||| ||||||| |||||||||||    
T  2117489 ttatagaaacaatttatggcatgtctataagctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatatgaaaa 2117390  T
Q  145 cggtttgactttattttatctcttttttatagaaatag 182  Q
      |||||||||| ||||||| |||| | ||||||||||    
T  2117389 tagtttgactttgttttatc-ctttgtcatagaaatag 2117353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 3181120 - 3181172
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  3181120 cttatgaaaacagtttatggtttatatgaaaacggtttgactttattttatct 3181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 181
Target Start/End: Complemental strand, 5329065 - 5328925
Alignment:
Q  39 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 138  Q
    ||||||||||||||| ||||||||   |||| ||||| || ||| ||||| ||| ||||| || || |  ||| ||||  ||||||||||||| || |||    
T  5329065 gagagtttatggaaataacttatgttatgtccataagctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttataatt-ata 5328967  T
Q  139 tgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    | |||| |||||||||||||||||||| ||| |||||||||||    
T  5328966 taaaaatggtttgactttattttatct-tttgttatagaaata 5328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 29274281 - 29274362
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||| ||||||| |||||| ||||||||||||  |||||||||||||||||| |||  ||||||||||| ||||| ||||||    
T  29274281 cttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatct-tttgctatagaaatagcttatacataagc 29274362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 22742384 - 22742304
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    ||||| |||| ||||||||| ||||||||||||  ||||||||||||||||| |||| ||||| |||||| ||||| |||||    
T  22742384 cttataaaaatagcttatagcttatatgaaaacaatttgactttattttatc-ctttgttatacaaatagcttatagataag 22742304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 2027455 - 2027526
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    |||||||| | |||||||||||| |||||||||||  ||||||||||||||||||| ||| ||||| ||||||    
T  2027455 tagcttatgagaacagcttataggttatatgaaaatagtttgactttattttatct-tttgttataaaaatag 2027526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 28088207 - 28088306
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    ||||||||||||||||| ||| ||| ||| |||||||| | ||| ||||||| |||| || |  ||||||||| ||||||| |||||| |||||||||||    
T  28088207 ttatggaaacaacttatacat-gtctataggttgttttgagcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaa 28088305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 165
Target Start/End: Original strand, 31671078 - 31671178
Alignment:
Q  65 ttgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
    ||||| || ||||||||| | ||| ||| |||||||| ||||| |||| |||  |||||||||||||| ||||||||||||  ||| ||||| |||||||    
T  31671078 ttgtctatcagttgttttcagcttattttcataagctatctaggatagtttacgaaaacagcttatagcttatatgaaaacaatttaactttgttttatc 31671177  T
Q  165 t 165  Q
    |    
T  31671178 t 31671178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 3785725 - 3785804
Alignment:
Q  86 cttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||  ||||||| || || ||||||||  |||||||||||||| ||||| |||||| |||| ||||||||||||||    
T  3785725 cttgtttttataagctctccagaatagcttacaaaaacagcttatagcttatacgaaaacagtttaactttattttatct 3785804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 34429747 - 34429809
Alignment:
Q  118 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||||||| ||||||||||||| |||||| ||| |||||||||||||||| || |||||||||||    
T  34429747 taaaacaacttatagtttataagaaaacagttagactttattttatctc-ttattatagaaata 34429809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 8420154 - 8420300
Alignment:
Q  18 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 117  Q
    ||||||||||||  |||| ||||||| |||| |||| | ||||||   |||| | ||| | |||| | ||| |||||||||||| || |  ||||||||     
T  8420154 aacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaacttatttccataagctctccattatagcttac 8420253  T
Q  118 taaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
     | ||||||||||| ||||||| || || ||||||||||||||||||    
T  8420254 gagaacagcttatattttatataaacacagtttgactttattttatc 8420300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 187
Target Start/End: Original strand, 9093528 - 9093681
Alignment:
Q  34 tttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag 132  Q
    |||||||||| ||||| ||| | |||||| |||||| |||||  |||||| | ||| ||| | |||| | ||||  | ||||||| ||||||||||||||    
T  9093528 tttgtgagagcttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatag 9093627  T
Q  133 tttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 187  Q
     ||||| ||||||  ||| |||||||||||||| |||  ||||||||||| ||||    
T  9093628 cttatacgaaaacaatttaactttattttatct-tttgatatagaaatagcttat 9093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 10616514 - 10616624
Alignment:
Q  34 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 133  Q
    |||| ||||| ||||||||||||||||||   ||||  |||||||| || | ||| |||  ||||||| || |  ||||||||||||||| ||||||| |    
T  10616514 tttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagcttattaaaacggcttatatt 10616613  T
Q  134 ttatatgaaaa 144  Q
    |||||||||||    
T  10616614 ttatatgaaaa 10616624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 1403018 - 1402946
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    ||||||||| ||||||  |||||| |||||||||||  |||| |||||||||||||| ||| ||||||||||||    
T  1403018 atagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatct-tttgttatagaaatag 1402946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 5550144 - 5550095
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatctctt 168  Q
    |||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  5550144 aaaacagcttatagcttatatgaaaacaatttgactttatgttatctctt 5550095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 5623178 - 5623125
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 162  Q
    ||||||||| |||||| ||||||||||||||||||||  |||| ||||||||||    
T  5623178 atagcttatgaaaacaacttatagtttatatgaaaactatttggctttatttta 5623125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 2460111 - 2460191
Alignment:
Q  21 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct 101  Q
    |||||||||  |||||| ||||| ||||||||||||||||||   ||||  ||||||||||| | ||| ||||||||||||    
T  2460111 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagct 2460191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 4006736 - 4006665
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||||||||| |||||| ||||||| |||||| |||||  |||||||||||||||||  ||| |||||||||||    
T  4006736 atagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatc-atttgttatagaaata 4006665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 165
Target Start/End: Complemental strand, 4081013 - 4080884
Alignment:
Q  34 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 133  Q
    |||| |||| |||||| |||||||||||||  |||  |||||||||||| | ||| ||||  |||||| |  || ||||||| |  ||| |||||||| |    
T  4081013 tttgagagattttatgaaaacaacttatgccatgttcataagttgttttcaacttatttc--taagctctgaagaatagcttctgcaaaaagcttataat 4080916  T
Q  134 ttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||| |||||||||| ||| ||||    
T  4080915 ttatatgaaaaccgtttgactttgtttcatct 4080884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 8470054 - 8470121
Alignment:
Q  127 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||| ||||||||||||||||||||||||| ||  ||| ||| |||||||| |||| |||||||    
T  8470054 ttatagtttttatgaaaacggtttgactttattttctc-atttgttacagaaatagcttatttataagc 8470121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 195
Target Start/End: Complemental strand, 9027669 - 9027514
Alignment:
Q  40 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct-ttctagcatagcttattaaaacagcttatagtttata 138  Q
    |||| ||||||||| ||||||||   |||| |||||||||||| | ||| ||| |||||||| |||| | |||| |||   || ||||||||   |||||    
T  9027669 agagcttatggaaataacttatgacatgtccataagttgttttcagcttattttcataagctcttcttggataggttaacgaaccagcttattacttata 9027570  T
Q  139 tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    | ||||| ||||||||||||||||||| | | || ||||||||| ||||| ||||||    
T  9027569 ttaaaacagtttgactttattttatct-tctattgtagaaatagcttatagataagc 9027514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 179
Target Start/End: Complemental strand, 10154281 - 10154174
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 170  Q
    |||||||||||| |  || ||||||||||||||  |   |||| ||| |||  ||||||||  |||||||||||| ||||||||||||||||||| ||||    
T  10154281 ataagttgttttcagtttatttccataagcttttcatgctagcctatgaaagtagcttataacttatatgaaaacagtttgactttattttatct-tttt 10154183  T
Q  171 ttatagaaa 179  Q
     ||||||||    
T  10154182 ctatagaaa 10154174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 2112222 - 2112152
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaat 180  Q
    |||| |||| |||||| ||||||||||||||| ||||  ||| |||||||||||||| ||| ||||||||||    
T  2112222 atagtttatgaaaacaacttatagtttatatg-aaacaatttaactttattttatctttttattatagaaat 2112152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 10032605 - 10032542
Alignment:
Q  97 aagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 160  Q
    |||||| |||||||||||||| || ||||||||||| ||||||||||   ||||| ||||||||    
T  10032605 aagcttgctagcatagcttataaagacagcttatagcttatatgaaattagtttgcctttattt 10032542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 10452419 - 10452493
Alignment:
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||| ||||||| |||||||||||  |||||| |||||||||| | ||| |||||||||||| ||||| ||||||    
T  10452419 aaacaacttatagcttatatgaaaatagtttgattttattttatat-tttgttatagaaatagcttatacataagc 10452493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 24836264 - 24836318
Alignment:
Q  126 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||||||||||||| ||||||  |||||||||||||||||| ||| |||||||||||    
T  24836264 cttatagtttatacgaaaacaatttgactttattttatct-tttgttatagaaata 24836318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 164
Target Start/End: Complemental strand, 30523745 - 30523627
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    |||||||||||||||||||  |||  ||||| |||||| | ||  |||| |||| || || || ||||||||| |||| | ||||||| ||||||||| |    
T  30523745 ttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaa-aacttatagcttatatgaaga 30523647  T
Q  145 cggtttgactttattttatc 164  Q
    || |||||| ||||||||||    
T  30523646 cgatttgacattattttatc 30523627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 33787774 - 33787876
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 189  Q
    |||||||||||| || |  ||| ||||| |||||||||||||  |||||||||| |  ||||||||| |||||| | ||| |||||||||||| |||||     
T  33787774 tttccataagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatat-tttgttatagaaatagtttatac 33787872  T
Q  190 ataa 193  Q
    ||||    
T  33787873 ataa 33787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 4248980 - 4248895
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||  |||||| ||||| |||||||  ||| |  |||||||||||||||||| ||| |||| ||||||| ||||||||||||    
T  4248980 atagcttaggaaaacaccttattgtttatacaaaatcaatttgactttattttatct-tttgttattgaaatagcttatatataagc 4248895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 10016568 - 10016483
Alignment:
Q  108 catagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    |||||||||| |||||||||||| | |||||||| ||| |||| | |||||||||||| |||  | ||||||||| ||||| |||||    
T  10016568 catagcttatgaaaacagcttatggcttatatgagaacagtttaaatttattttatct-tttggtttagaaatagcttatacataag 10016483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 24774748 - 24774695
Alignment:
Q  141 aaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||| ||||||||||||||||| | ||| |||||||||||| ||||||||||||    
T  24774748 aaaacagtttgactttattttatat-tttgttatagaaatagtttatatataagc 24774695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 4247077 - 4247181
Alignment:
Q  77 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 176  Q
    |||||| | ||||||| ||||||| |||||| | | ||||| |||||||||||||  |||||||||||| |    ||| |||||||||| ||| ||||||    
T  4247077 tgttttcagcttgttttcataagccttctaggacaacttatgaaaacagcttataacttatatgaaaacagaccaactctattttatct-tttgttatag 4247175  T
Q  177 aaatag 182  Q
    ||||||    
T  4247176 aaatag 4247181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 24782096 - 24782004
Alignment:
Q  94 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 187  Q
    |||||||| || || |||| ||||||||  ||||||||  ||||||||||||  ||||| || ||||||||| ||| |||||||||||| ||||    
T  24782096 cataagctctcaaggatagtttattaaagtagcttataacttatatgaaaacaatttgatttgattttatct-tttgttatagaaatagcttat 24782004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 31624278 - 31624202
Alignment:
Q  111 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    ||||||||||||||||| |||| ||||| ||||||  ||| |  ||||||||||| ||| |||||||||||| |||||    
T  31624278 agcttattaaaacagctaatagattatacgaaaacaatttaaacttattttatct-tttgttatagaaatagcttata 31624202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 33887941 - 33887796
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 119  Q
    |||||||||  ||||||| |||| |||||| ||| | ||||||   |||  | |||||||||| | ||| ||||||||||| ||  || ||||||||| |    
T  33887941 cacttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttatttccataagcatttcaggatagcttatga 33887842  T
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||| |||| | |||||  ||||| |||||| ||| ||||||||    
T  33887841 aaacagtttattgattatactaaaacagtttgagtttgttttatct 33887796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 2514686 - 2514639
Alignment:
Q  147 gtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  2514686 gtttgactttattttatct-tttattatagaaatagcttatacataagc 2514639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 4246432 - 4246396
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaac 145  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  4246432 atagcttatgaaaacagcttatagattatatgaaaac 4246396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 6654655 - 6654552
Alignment:
Q  91 ttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatata 190  Q
    ||||||||||| || |  ||||| ||||||||||||||| |||||| |  |||||  |||||||| ||||||| | ||| |||||||||||  ||||| |    
T  6654655 ttccataagctctccaagatagcatattaaaacagcttaaagtttaaacaaaaacaatttgacttaattttat-tatttgttatagaaataacttataca 6654557  T
Q  191 taagc 195  Q
    |||||    
T  6654556 taagc 6654552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 7148757 - 7148657
Alignment:
Q  40 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 139  Q
    |||| ||| ||||||||||||||  ||||| ||||| | |||| | ||| ||| |||||||| || ||  ||||||||||||| | ||||||| ||||||    
T  7148757 agagcttacggaaacaacttatgacttgtccataagctattttcaacttattttcataagctctccagggtagcttattaaaataccttatagcttatat 7148658  T
Q  140 g 140  Q
    |    
T  7148657 g 7148657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 25426192 - 25426136
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| |||| ||||||||| ||| |||||| |  ||||||||||||||||||    
T  25426192 atagcttataaaaatagcttatagcttacatgaaagcaatttgactttattttatct 25426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 28660788 - 28660864
Alignment:
Q  89 gtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||||||  || |||| |||| ||||||  ||||| ||||||||||||   ||| ||||||||||||||    
T  28660788 gtttccataagcttttaaggatagtttatgaaaacaatttataatttatatgaaaataatttaactttattttatct 28660864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 32917310 - 32917266
Alignment:
Q  18 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatg 62  Q
    ||||||||||||  |||||| ||||| ||||||||||||||||||    
T  32917310 aacacttgtgagactgtttgggagagcttatggaaacaacttatg 32917266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 38462390 - 38462220
Alignment:
Q  21 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaa 120  Q
    |||||| || ||| ||||||||| ||||  |||||| |||||  ||| | |||||||||||| | ||| |||||||||||| ||| | ||||||||| ||    
T  38462390 acttgtaagattgattgtgagagcttatacaaacaa-ttatgacttgaccataagttgttttcagcttatttccataagctatcttggatagcttatgaa 38462292  T
Q  121 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    ||||| ||||||  ||||||||||| ||||||||||||||||||| |||  ||||||||||| ||||| ||||    
T  38462291 aacagtttatagcatatatgaaaacagtttgactttattttatct-tttggtatagaaatagcttataaataa 38462220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 23785340 - 23785221
Alignment:
Q  46 tatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 145  Q
    |||||||||| ||||||   |||| |||||||||||| | |||||||||||||||| || |  | ||||| | ||||||| |||||| ||||||||| ||    
T  23785340 tatggaaacagcttatggcgtgtccataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttatatgaatac 23785241  T
Q  146 ggtttgactttattttatct 165  Q
     |||||||||||||||||||    
T  23785240 agtttgactttattttatct 23785221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 40122763 - 40122884
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 170  Q
    |||||||||||| | ||| ||||||| | |||| ||| ||||||||| |||||| ||||||| || ||||||||| ||||||||||||||||||| |||     
T  40122763 ataagttgtttttagcttatttccattaactttttaggatagcttataaaaacaacttatagctt-tatgaaaacagtttgactttattttatct-tttg 40122860  T
Q  171 ttatagaaatagattatatataag 194  Q
    |||| ||||||| ||||| |||||    
T  40122861 ttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 36646355 - 36646511
Alignment:
Q  34 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 133  Q
    |||| ||||| |||||||||| |||||||   |||| ||||| |||||| ||||| |||| |||| || ||||| ||||||||| ||||||  |||||      
T  36646355 tttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagttataac 36646454  T
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatat 191  Q
    ||||||||||||  ||  |||||||||||||| ||| | |||||||||| ||||||||    
T  36646455 ttatatgaaaacaattatactttattttatct-tttgtcatagaaatagcttatatat 36646511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 20192664 - 20192739
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| ||| ||||| |||||| ||||| ||||||    
T  20192664 aaaacagcttatagattatatgaaaactgtttgactttattttatct-tttgttatataaatagcttatacataagc 20192739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 24887315 - 24887409
Alignment:
Q  93 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    ||||||||| || || ||||||||| |||||||||| ||| ||||||||| || |||||||||||||||||||  || |||||||||||| |||||    
T  24887315 ccataagctctccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatct-attgttatagaaatagcttata 24887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 43115167 - 43115048
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 119  Q
    |||||||||| |||||||  |||||||||||||||||||||||   |||| |||| ||||||| | ||| |||||||||||| || |  |||| | || |    
T  43115167 cacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagttcatga 43115068  T
Q  120 aaacagcttatagtttatat 139  Q
    ||||| ||||||| ||||||    
T  43115067 aaacaacttatagcttatat 43115048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 181
Target Start/End: Complemental strand, 54775219 - 54775079
Alignment:
Q  39 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 138  Q
    ||||||||||||||| ||||||||   |||| ||||| || ||| ||||| ||| ||||| || || |  ||| ||||  ||||||||||||| || |||    
T  54775219 gagagtttatggaaataacttatgttatgtccataagctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttataatt-ata 54775121  T
Q  139 tgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    | |||| |||||||||||||||||||| ||| |||||||||||    
T  54775120 taaaaatggtttgactttattttatct-tttgttatagaaata 54775079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 36783382 - 36783454
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    ||||||||| ||||||||| |||||||||||||||||  ||| |||||||||||||| |||  |||||||||||    
T  36783382 atagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatct-tttggtatagaaatag 36783454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 2201150 - 2201094
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||| || |||||||||||||| |||||||||||| |||||||||| ||||||||    
T  2201150 atagctaatgaaaacagcttatagcttatatgaaaacagtttgactttgttttatct 2201094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 14548680 - 14548823
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatt 118  Q
    ||||||||||  |||||| ||||| ||||| ||||||| |||| |||| | |||| | |||||| | ||| |||||||||||| || || ||| |||||     
T  14548680 cacttgtgagactgtttgagagagcttatgaaaacaacgtatgacatttt-aataggctgttttcagcttatttccataagctctccagaataacttatg 14548778  T
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    |||||| ||||||| ||||||||||||  ||||| || |||||||    
T  14548779 aaaacaacttatagcttatatgaaaactttttgatttgattttat 14548823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 25453892 - 25453968
Alignment:
Q  94 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 170  Q
    ||||||||||| || |||| |||| |||| || |||||| ||||| |||||| ||||||||||||||||||| ||||    
T  25453892 cataagctttccaggatagtttatgaaaataggttataggttatacgaaaacagtttgactttattttatctgtttt 25453968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 183
Target Start/End: Original strand, 20502116 - 20502191
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaac-ggtttgactttattttatctcttttttatagaaataga 183  Q
    ||||||||| ||||||||||||||  ||||||||||| | ||||||||||||| |||| ||| | |||||||||||    
T  20502116 atagcttatgaaaacagcttatagcgtatatgaaaacagttttgactttatttgatctttttgtcatagaaataga 20502191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 23315667 - 23315592
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||| | ||| |||||||||  ||||| |||||||  |||||||||||  ||||||||||||||||||    
T  23315667 tttccataagctctttagaatagcttatggaaacatcttatagcctatatgaaaacaatttgactttattttatct 23315592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 49586984 - 49587042
Alignment:
Q  129 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    |||| |||||||||||| ||||||||||||||||||| ||| |||||||||||| |||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatct-tttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 24785265 - 24785171
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||| | ||| ||| |||||||| || || ||||||||| ||||||  |||||| |||||  ||||| | |||||||||||||||||    
T  24785265 ataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaacagattgactttattttatct 24785171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 31337435 - 31337505
Alignment:
Q  95 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||||  |||||||| || ||| ||||||  |||||| ||||| |||||||||||||||||||    
T  31337435 ataagctttctagattagcttatgaatacaacttataacttatataaaaacagtttgactttattttatct 31337505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 37273233 - 37273135
Alignment:
Q  32 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 130  Q
    |||||| ||||| ||||||||||||||||||   |||| |||||||||||| | ||| |||||||||| | || |  ||||||||| ||||||| ||||    
T  37273233 tgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaacagtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 20874339 - 20874388
Alignment:
Q  96 taagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 145  Q
    |||||| | ||| ||||||||| |||||||||||||||||||||||||||    
T  20874339 taagctatttaggatagcttatgaaaacagcttatagtttatatgaaaac 20874388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 42038996 - 42038940
Alignment:
Q  124 agcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||||||||| ||||||||||||||||||||||||||  |||| ||| |||||||||||    
T  42038996 agcttatagcttatatgaaaacggtttgactttattagatct-tttgttatagaaata 42038940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 2321288 - 2321248
Alignment:
Q  21 acttgtgagcttgtttgtgagagtttatggaaacaacttat 61  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  2321288 acttgtgagattgtttgagagagtttatggaaacaacttat 2321248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 33965537 - 33965592
Alignment:
Q  109 atagcttattaaaacagcttatag--tttatatgaaaacggtttgactttatttta 162  Q
    ||||||||| |||||| |||||||  ||||||||||||| ||||||||||||||||    
T  33965537 atagcttatgaaaacatcttatagcttttatatgaaaacagtttgactttatttta 33965592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 179
Target Start/End: Complemental strand, 2318703 - 2318596
Alignment:
Q  73 aagttgttttaatcttgtttccataagctttcta-gcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 171  Q
    |||||||||| | ||| |||| ||||||| || | | ||| ||||| |||||| ||||||||||||||||||||  ||||| || |||||||||  || |    
T  2318703 aagttgttttcagcttatttctataagctctccaagaataacttataaaaacaacttatagtttatatgaaaacaatttgatttgattttatcttgttgt 2318604  T
Q  172 tatagaaa 179  Q
    ||||||||    
T  2318603 tatagaaa 2318596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 23249596 - 23249529
Alignment:
Q  93 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 160  Q
    ||||||||||||||  ||||||||| |||||| ||||||  |||||| ||||| ||||||||| ||||    
T  23249596 ccataagctttctaagatagcttatgaaaacaacttatatcttatataaaaacagtttgacttcattt 23249529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 28306180 - 28306102
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    ||||||||| |||||| ||| ||  |||||||||||| |||||||||||||||| || ||| ||||||| |||| |||||    
T  28306180 atagcttatgaaaacaacttgtaacttatatgaaaacagtttgactttatttta-ctttttgttatagagatagcttata 28306102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 41452609 - 41452494
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    |||| |||||||||||||   |||| ||||| |||||| | ||| |||||| ||  | || || ||||||||| ||||||||||| |  | |||||||||    
T  41452609 ttatagaaacaacttatgatatgtctataagctgttttcaccttatttccacaacttctccaggatagcttatgaaaacagcttacaactaatatgaaaa 41452510  T
Q  145 cggtttgactttattt 160  Q
    | ||||||||||||||    
T  41452509 cagtttgactttattt 41452494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 1395688 - 1395615
Alignment:
Q  114 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    |||| ||||||| | |||| |||||||||||   |||||||||||||||||| ||| |||||||||||| |||||    
T  1395688 ttatgaaaacagttcatagcttatatgaaaataatttgactttattttatct-tttgttatagaaatagcttata 1395615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 1816619 - 1816549
Alignment:
Q  95 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||| || || ||||||||| |||||| ||||||  |||||  ||||| |||||||||||||||||||    
T  1816619 ataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgactttattttatct 1816549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 2865718 - 2865789
Alignment:
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    ||||| ||||||| ||||||||||||  ||||||||| |||||   |||| |||||||||||| ||||||||||    
T  2865718 aaacaacttataggttatatgaaaacaatttgactttgtttta--actttgttatagaaatagcttatatataa 2865789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 19679376 - 19679430
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    |||| |||| |||||| ||||||| ||||| |||||| |||||||||||||||||    
T  19679376 atagtttataaaaacaacttatagcttataagaaaacagtttgactttattttat 19679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 21872302 - 21872376
Alignment:
Q  92 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc 166  Q
    ||||||| ||||| || ||||||||| |||||| ||||||| |||||| ||||   |||||| ||||||||||||    
T  21872302 tccataaactttccaggatagcttatgaaaacaacttatagcttatatcaaaaaaatttgaccttattttatctc 21872376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 1217779 - 1217884
Alignment:
Q  40 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 139  Q
    |||| ||| ||||||| ||||||   |||| |||||||||||| |||||  || |||||| | || || ||||||||| |||||||||||||  ||| ||    
T  1217779 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataacttacat 1217878  T
Q  140 gaaaac 145  Q
    ||||||    
T  1217879 gaaaac 1217884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 3467446 - 3467491
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
    |||||| |||||||| |||||||||||  |||||||||||||||||    
T  3467446 aaaacaacttatagtctatatgaaaacaatttgactttattttatc 3467491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 33405215 - 33405268
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 162  Q
    ||||||||| |||||||||||||| ||||||||||||   || |||||||||||    
T  33405215 atagcttatgaaaacagcttatagcttatatgaaaacaaattaactttatttta 33405268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 54965517 - 54965472
Alignment:
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||| ||| |||||||||||||||  |||||||||||||||||||    
T  54965517 aaacaacttgtagtttatatgaaaattgtttgactttattttatct 54965472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 8007761 - 8007828
Alignment:
Q  127 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||| |||||||| ||| ||||||||||| ||||||| ||| ||||||||| || ||||| ||||||    
T  8007761 ttatagcttatatgataacagtttgactttactttatct-tttgttatagaaacagcttatacataagc 8007828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 15304417 - 15304472
Alignment:
Q  131 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 187  Q
    |||||||||||||||  ||| |||||||||||||| ||| |||||||||||| ||||    
T  15304417 agtttatatgaaaacaatttaactttattttatct-tttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 24235731 - 24235802
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||||||||| |||||| ||||||| ||||||  |||  |||||||||||| |||||| ||| |||||||||||    
T  24235731 atagcttatgaaaacaacttatagcttatattcaaatagtttgactttatattatct-tttgttatagaaata 24235802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 193
Target Start/End: Complemental strand, 4558884 - 4558737
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    ||||||||| ||||||||   |||| |||||||||||| |  || |||||||||||| ||||| |||||||||  |||||||||||||  ||||||||||    
T  4558884 ttatggaaataacttatgatgtgtctataagttgtttttagtttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaa 4558785  T
Q  145 cggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
       ||| |||||||||||||| ||| |||||||||||| ||||| ||||    
T  4558784 taatttaactttattttatct-tttattatagaaatagcttatacataa 4558737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 12361257 - 12361130
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| ||||| |||||| | ||| ||||||| |||| ||  | ||| ||||| |||||||||||||| ||||||||||||  |||||||| |||||||||    
T  12361257 tgtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttatct 12361158  T
Q  166 cttttttatagaaatagattatatataag 194  Q
     || ||||||||||||  |||||||||||    
T  12361157 -ttatttatagaaataacttatatataag 12361130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 27728063 - 27728141
Alignment:
Q  103 tctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    ||||| ||||||||| |||||| || ||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  27728063 tctaggatagcttatgaaaacaactaatactttatatgaaaatagtttgactttattttatct-ttttttatagaaatag 27728141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 33209268 - 33209350
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatata 192  Q
    ||||||||| |||| |||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||| |||| ||||    
T  33209268 atagcttataaaaatagcttatagtttatatgaaaacagttcgactttattttatct-ttcattatagaaatagcttatttata 33209350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 4763957 - 4763884
Alignment:
Q  92 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||| |  || ||||||||  |||||||||||||| |||| |||||||||||||| ||||||||||||    
T  4763957 tccataagctcttcaggatagcttagaaaaacagcttatagcttatgtgaaaacggtttgaatttattttatct 4763884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 28769344 - 28769441
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    |||| |||||||||||| | ||| ||||||||| || || |  ||||||||| |||||||||||||| ||||| |||||  ||||||||| |||||||    
T  28769344 tgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttat 28769441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 195
Target Start/End: Complemental strand, 29973122 - 29973018
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 189  Q
    ||||||||| || || || ||||||||| |||||| ||||||| |||| ||||||  |||||||||||||||| || | | ||| |||||||| ||||||    
T  29973122 tttccataaactctcaaggatagcttatgaaaacaacttatagcttatgtgaaaatagtttgactttattttacct-tgtgttaaagaaatagcttatat 29973024  T
Q  190 ataagc 195  Q
    ||||||    
T  29973023 ataagc 29973018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 164
Target Start/End: Original strand, 30191112 - 30191244
Alignment:
Q  32 tgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 130  Q
    |||||| ||||| |||||||||||||||||| |||  |||| || ||||||| | ||| ||||||||| | ||  || ||||||||| |||| |||||||    
T  30191112 tgtttgggagagcttatggaaacaacttatgacatgttcaa-aacttgttttcagcttatttccataaacatttcaggatagcttatcaaaatagcttat 30191210  T
Q  131 agtttatatgaaaacggtttgactttattttatc 164  Q
    || |||||||  | | ||||||||||||||||||    
T  30191211 agattatatgtgagcagtttgactttattttatc 30191244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 1470867 - 1470982
Alignment:
Q  72 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 171  Q
    ||||||||||| ||||| ||| | ||| ||||  |  |||| |||| |||||||||||||| ||||||||||    |||||||||||||||||| ||| |    
T  1470867 taagttgttttcatcttattttcctaaacttttcatgataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatct-tttat 1470965  T
Q  172 tatagaaatagattata 188  Q
    ||||||||||| |||||    
T  1470966 tatagaaatagcttata 1470982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 6509332 - 6509407
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| ||||||| || || ||||||||| |||||||||||||| |||||| || ||  ||||||||||||||||||    
T  6509332 tttcaataagctctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttattttatct 6509407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 6950435 - 6950288
Alignment:
Q  18 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 117  Q
    |||| ||||||| ||||||| ||||| ||||| ||||||| ||||   |||| |||||||||||| | ||| |||||||||||| | ||| ||| ||| |    
T  6950435 aacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagcttatttccataagctctttaggataactttt 6950336  T
Q  118 --taaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
      ||||  ||||||||  |||||||||||| ||||| ||||| |||||||    
T  6950335 tataaattagcttata--ttatatgaaaacagtttgtctttactttatct 6950288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 11183625 - 11183495
Alignment:
Q  51 aaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggttt 150  Q
    ||||||||||||   |||| ||||| |||||| | ||| |||||||||||| || ||  |||||| | |||||||||||||| | ||||||  || ||||    
T  11183625 aaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttatagctaatatgaggacagttt 11183526  T
Q  151 gactttattttatctcttttttatagaaatag 182  Q
    |||||| |||||||| || ||| |||||||||    
T  11183525 gactttgttttatctgttgttt-tagaaatag 11183495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 195
Target Start/End: Original strand, 35298525 - 35298611
Alignment:
Q  109 atagcttattaaaacagcttatagtttata-tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||| |||||| ||||||||||||| ||||||| ||||| ||||||||||||| ||| |||  ||||||| ||||| ||||||    
T  35298525 atagcttatgaaaacaacttatagtttatattgaaaactgtttggctttattttatct-tttgttactgaaatagcttatacataagc 35298611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 34770920 - 34770858
Alignment:
Q  103 tctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||| ||||||||| |||||| ||||||| ||| ||||||||  ||||||||||||||||||    
T  34770920 tctaggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatct 34770858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 43704392 - 43704473
Alignment:
Q  77 tgttttaatcttgtttccataagctttctagcata--gcttattaaaacagcttatagtttatatgaaaacggtttgacttt 156  Q
    |||||||| ||| ||||||||||||||  || |||   ||||| |||||| |||||||||||||||||||| ||||||||||    
T  43704392 tgttttaagcttatttccataagcttttgaggataactcttatgaaaacaacttatagtttatatgaaaacagtttgacttt 43704473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 39551180 - 39551313
Alignment:
Q  32 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 131  Q
    |||||| |||| |||||||||||||||||||   |||| | ||| |||||| | ||| |||  ||||||| || || | ||||||| |||||| ||||||    
T  39551180 tgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaacaacttata 39551279  T
Q  132 gtttatatgaaaacggtttgactttattttatct 165  Q
    | || |||||| || ||||  |||||||||||||    
T  39551280 gcttgtatgaagacagtttagctttattttatct 39551313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 3936870 - 3936787
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    |||||||  |||||||||||||| ||||| ||| ||  |||  |||||||||||| |||| |||||||||||||||||| |||||    
T  3936870 tagcttacgaaaacagcttatagcttataggaagacaatttagctttattttatc-ctttgttatagaaatagattatacataag 3936787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 8799427 - 8799356
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||||||||| |||||| |||||| ||||| || |||  ||||||||||||||||||| ||| |||||||||||    
T  8799427 atagcttataaaaacaccttataatttatctggaaatagtttgactttattttatct-tttgttatagaaata 8799356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 10076335 - 10076408
Alignment:
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||||| |||||||||||||  ||||||||  || ||| | ||| |||||||||||||||||| ||||||    
T  10076335 aaacagcttataatttatatgaaaacaatttgactt--ttatatttttttattatagaaatagattatacataagc 10076408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 10079080 - 10079140
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 131  Q
    |||||||||||||| ||| ||||||||| ||||| || |||||| || |||||||||||||    
T  10079080 ataagttgttttaagcttctttccataaactttccagaatagctcatgaaaacagcttata 10079140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 30277255 - 30277315
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 131  Q
    |||||||||||| | ||| ||||||||| || ||||| ||||||||| |||||||||||||    
T  30277255 ataagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 35534931 - 35534994
Alignment:
Q  131 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||  ||||| |||||||||||||||| || ||| |||||||||||| ||||||||||||    
T  35534931 agtttatacaaaaacagtttgactttattttaact-tttattatagaaatagcttatatataagc 35534994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 44865587 - 44865647
Alignment:
Q  84 atcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    ||||| ||||||||| || ||||| ||||||||| ||| |||||||||| |||||||||||    
T  44865587 atcttatttccataaactctctagtatagcttataaaaccagcttatagcttatatgaaaa 44865647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 8060768 - 8060669
Alignment:
Q  32 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 131  Q
    |||||| ||||| ||||| |||||| ||||| |  ||  ||||||| |||| | ||| |||||||||||| ||||| || |||||| |||||||||||||    
T  8060768 tgtttgagagagcttatgaaaacaaattatggaaagttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaacagcttata 8060669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 9700066 - 9699940
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| ||||| |||||| | ||| ||| |||||||| ||| | ||| | ||| ||||||||||||| ||||| |||||||  |||||| |||||||| ||    
T  9700066 tgtccataagctgttttcaccttattttcataagctctcttgaataacatatgaaaacagcttataatttatttgaaaacaatttgaccttattttaact 9699967  T
Q  166 cttttttatagaaatagattatatataa 193  Q
     ||| |||| ||||||| ||||| ||||    
T  9699966 -tttgttatcgaaatagcttatacataa 9699940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 26820216 - 26820150
Alignment:
Q  114 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    |||| ||||| ||||||||||||||  ||||  ||||||||||||||||||| ||| |||||||||||    
T  26820216 ttatgaaaacggcttatagtttataacaaaatagtttgactttattttatct-tttgttatagaaata 26820150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 30013240 - 30013189
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 160  Q
    ||||||||| |||||||||||||| ||||||| |||| ||||||||| ||||    
T  30013240 atagcttatgaaaacagcttatagcttatatggaaacagtttgacttaattt 30013189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 42215316 - 42215411
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc 166  Q
    ||||| |||||| | ||| ||| |||||||| || || ||||| ||| |||| || |||||| |||||  ||||| ||||||||||||||||||||    
T  42215316 ataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttatagattatacaaaaacagtttgactttattttatctc 42215411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 11795146 - 11795064
Alignment:
Q  77 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatt 159  Q
    |||||| | ||| |||||||||||| || |  ||||||||| ||| |||||||||  |||||||||||| || ||||||||||    
T  11795146 tgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaacagtgtgactttatt 11795064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 160
Target Start/End: Original strand, 26284800 - 26284894
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 160  Q
    |||| |||||||||||| | ||| ||| |||||||| |  || ||| ||||  |||||| ||| || ||||||||||||| ||||||||||||||    
T  26284800 tgtctataagttgttttcagcttattttcataagctatacaggataacttacgaaaacaacttgtactttatatgaaaacagtttgactttattt 26284894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 31862553 - 31862459
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||| |||||| | ||| ||| |||||||| ||||| ||| ||||| |||||| ||||||| ||||| || ||  |||||||||||| ||||||    
T  31862553 ataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttatacgagaatagtttgactttatattatct 31862459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 35869859 - 35869805
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    ||||||||| |||||| ||||||| |||||||||||  |||||| ||||||||||    
T  35869859 atagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttat 35869805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 40280185 - 40280227
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatg 62  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||    
T  40280185 cacttatgagattgtttgagagagtttatggaaacaacttatg 40280227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 42597420 - 42597339
Alignment:
Q  112 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    |||||| |||||| ||||||| ||  ||||||||  ||| |||||||||||||| ||| |||||||||||| ||||| |||||    
T  42597420 gcttatgaaaacaacttatagcttgcatgaaaacaattttactttattttatct-tttgttatagaaatagcttatacataag 42597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 31885094 - 31885162
Alignment:
Q  96 taagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||| ||||| ||||||||  ||||||| |||||| |||||  |||||||||||||||| ||||||||    
T  31885094 taagctctctaggatagcttac-aaaacagtttatagcttatacaaaaacggtttgactttcttttatct 31885162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 39561557 - 39561661
Alignment:
Q  77 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 176  Q
    |||||| | ||| ||||||||||||||  |  ||||||||  |||||| ||||||||||| ||||||||   | |||||||||||||  |||| ||||||    
T  39561557 tgttttcagcttatttccataagcttttcatgatagcttacgaaaacaacttatagtttagatgaaaacaaatcgactttattttat-actttgttatag 39561655  T
Q  177 aaatag 182  Q
    ||||||    
T  39561656 aaatag 39561661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 787158 - 787210
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||| ||||||| |||||| |||||||| |||  ||||||||||||||||||    
T  787158 cttatgaaaacagtttatagcttatatgataacaatttgactttattttatct 787210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 6918236 - 6918307
Alignment:
Q  118 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatata 190  Q
    |||| ||| |||||| ||||  |||||| ||||||||||||||||||| ||| ||||| |||||| |||||||    
T  6918236 taaagcagtttatagcttattagaaaacagtttgactttattttatct-tttattatataaatagcttatata 6918307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 8062394 - 8062322
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 138  Q
    |||| ||||| |||||| | ||| ||||||||| || ||||  ||||||||| |||||||||||||| |||||    
T  8062394 tgtccataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagcttata 8062322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 30040598 - 30040664
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||||| |||||| ||||||||||||| |||||| | ||||||||||| ||| ||||| |||||||||||    
T  30040598 cttatgaaaacaacttatagtttata-gaaaacagattgactttattctat-tctttgttatagaaata 30040664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 31705145 - 31705073
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 143  Q
    ||||| |||||| | ||| ||||||||| || || || | ||||||| |||||||||||||| ||||||||||    
T  31705145 ataagctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagcttatatgaaa 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 39049385 - 39049305
Alignment:
Q  18 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataa 98  Q
    |||| ||||||| |||||||||| || ||||| |||||||||||    |||||||||| |||||| | ||||||| |||||    
T  39049385 aacatttgtgagattgtttgtgaaagcttatgaaaacaacttataacatgtcaataagctgttttcaacttgtttgcataa 39049305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 41336693 - 41336749
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| ||||||  || ||||||||||||||||  ||||||| ||||||||||    
T  41336693 atagcttatgaaaacaagttctagtttatatgaaaacaatttgactatattttatct 41336749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 5e-21; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 40 - 195
Target Start/End: Complemental strand, 16889826 - 16889672
Alignment:
Q  40 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 139  Q
    |||| ||||| ||||| ||||| |  |||| |||||||||||| |  || ||||||||| || ||||||||||||||| |||||||||||||| || |||    
T  16889826 agagattatgaaaacagcttatactatgtctataagttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttatagcttctat 16889727  T
Q  140 gaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
     ||||| ||||||||| | ||||||| ||| |||| ||||||| ||||| ||||||    
T  16889726 aaaaacagtttgacttaagtttatct-tttgttatggaaatagcttatacataagc 16889672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 28586777 - 28586886
Alignment:
Q  72 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 171  Q
    |||| |||||| | ||| |||| ||||||| ||||| ||||||  | ||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |    
T  28586777 taagctgttttcagcttatttcgataagctctctaggatagctcgtcaaaacagcttataatttatatgaaaacagtttgactttattttatct-tttgt 28586875  T
Q  172 tatagaaatag 182  Q
    |||||||||||    
T  28586876 tatagaaatag 28586886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 14295598 - 14295456
Alignment:
Q  39 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 138  Q
    ||||| ||||| ||||| ||||||   |||| ||||| |||||| | |||  ||| | ||||| || || ||||||||  |||||||||||||| |||||    
T  14295598 gagagcttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttata 14295499  T
Q  139 tgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||    
T  14295498 tgaaaacagtttgactttattttatct-tttgttatagaaatag 14295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 37588322 - 37588479
Alignment:
Q  23 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 122  Q
    |||||||  |||||| ||||| ||||| | ||||| |||| | ||| |||||| |||||| | ||| |||||||||||| || || ||| ||||| ||||    
T  37588322 ttgtgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaa 37588421  T
Q  123 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    || ||||||| ||||||||||||  ||||| || ||||||||| ||| |||||||||||    
T  37588422 caacttatagcttatatgaaaactttttgatttgattttatct-tttattatagaaata 37588479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 195
Target Start/End: Complemental strand, 12975413 - 12975284
Alignment:
Q  64 attgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    |||||| |||||||||||| | ||| || ||||||||| || |  ||||||||| || ||||||||||| ||||||||||||  ||||| ||||||||||    
T  12975413 attgtccataagttgttttcaacttatt-ccataagctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattttat 12975315  T
Q  164 ctcttttttatagaaatagattatatataagc 195  Q
     ||||| |||||| ||||| || |||||||||    
T  12975314 -tctttgttataggaatagtttgtatataagc 12975284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 18875421 - 18875331
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 161  Q
    |||||||||||| | |||||||||||||||| || || ||| |||||||||||||||||||  || ||||||| |  ||||||||||||||    
T  18875421 ataagttgttttcaacttgtttccataagctctccaggatatcttattaaaacagcttataacttgtatgaaatcaatttgactttatttt 18875331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 187
Target Start/End: Complemental strand, 35960510 - 35960359
Alignment:
Q  34 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 133  Q
    |||| ||||| |||||||| ||||||| |   |||| ||||| |||||| | ||| ||||  || |||||| || ||||||||| ||| || ||||||||    
T  35960510 tttgagagagcttatggaagcaacttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttatgaaatcaacttatagt 35960411  T
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 187  Q
    ||||||| |||  ||||||||||||||||||| ||| |||||||||||| ||||    
T  35960410 ttatatg-aaatagtttgactttattttatct-tttattatagaaatagtttat 35960359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 195
Target Start/End: Complemental strand, 12425639 - 12425508
Alignment:
Q  63 cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 162  Q
    |||||||||||||||||||| | ||| ||| |||||| | || |  ||||||| | |||||||||||||| ||||| ||||||  ||| |||||||||||    
T  12425639 cattgtcaataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttatttta 12425540  T
Q  163 tctcttttttatagaaatagattatatataagc 195  Q
    ||| |||  |||| |||||| ||||| ||||||    
T  12425539 tct-tttactatataaatagtttatacataagc 12425508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 32172764 - 32172589
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 119  Q
    |||||||||| | ||||| ||||| ||||||||||||||||||   |||| |||||   |||| | ||| ||||||| || | |  |  ||||||||| |    
T  32172764 cacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatga 32172665  T
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagct 196  Q
    ||||||||||||| ||||||| ||||   ||||||| ||||||||| ||| || ||||||||| ||||| |||||||    
T  32172664 aaacagcttatagcttatatgtaaacaacttgacttcattttatct-tttgttgtagaaatagtttatacataagct 32172589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 32059642 - 32059693
Alignment:
Q  114 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatct 32059693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 20982207 - 20982268
Alignment:
Q  133 tttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||| ||||||    
T  20982207 tttatatgaaaacgggttgactttattttatc-ctttgttatagaaatagcttatacataagc 20982268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 37526161 - 37526318
Alignment:
Q  23 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 122  Q
    |||||||  |||||| ||||| ||||| | ||||| ||||   ||| |||||| |||||| | ||| |||||||||||| || || | | ||||| ||||    
T  37526161 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaa 37526260  T
Q  123 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    || ||||||| ||||||||||||  ||||| || ||||||||| ||| |||||||||||    
T  37526261 caacttatagcttatatgaaaactttttgatttgattttatct-tttattatagaaata 37526318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 38047886 - 38047959
Alignment:
Q  92 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||| || || ||||||||| |||||||| |||||| ||||||||||   ||||||||||||||||||    
T  38047886 tccataagctctccaggatagcttatgaaaacagcatatagtatatatgaaaataatttgactttattttatct 38047959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 168
Target Start/End: Complemental strand, 30217192 - 30217045
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 119  Q
    ||||||||||  |||||  ||||| ||||||||  | ||||||||| ||| |||||||||||||   || |||||||||||| || || ||||||||| |    
T  30217192 cacttgtgagactgtttaggagagcttatggaattatcttatgcat-gtccataagttgttttaggtttatttccataagctctccaggatagcttatga 30217094  T
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatctctt 168  Q
    || |||||||||| |||  |||||    || ||||||||||||||||||    
T  30217093 aagcagcttatagattacgtgaaattaattagactttattttatctctt 30217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 1437611 - 1437697
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat-taaaacagcttata 131  Q
    ||||||||||||||||| ||| ||| |||||| ||||| ||||||||||||| ||||||| |  |||||||||  |||||||||||||    
T  1437611 ttatggaaacaacttatacat-gtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaaacagcttata 1437697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 195
Target Start/End: Original strand, 39257438 - 39257519
Alignment:
Q  112 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||||||| || ||| ||||||| ||||  |||| ||||||    
T  39257438 gcttatgaaaacaacttatagtttatatgaaaa-ggtttgactttattttacct-tttgttatagagatagcatatacataagc 39257519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 7096203 - 7096260
Alignment:
Q  137 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  7096203 tatgaaaatggtttgactttattttatct-tttgttatagaaatagcttatacataagc 7096260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 9202800 - 9202881
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||| |||||||||||| | ||||||||||||  ||| |||||||||||||| |||  || |||||||| ||||||||||||    
T  9202800 cttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatct-tttgctacagaaatagcttatatataagc 9202881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 14980517 - 14980471
Alignment:
Q  117 ttaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||    
T  14980517 ttaaaacaggttatagtttagatgaaaacagtttgactttattttat 14980471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 12595789 - 12595857
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaa 179  Q
    |||||||| ||| ||||| |||||||||||||||||  ||| |||||||||||||| ||| |||||||||    
T  12595789 tagcttatgaaaccagctcatagtttatatgaaaacaatttaactttattttatct-tttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 152
Target Start/End: Original strand, 36542260 - 36542373
Alignment:
Q  39 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 138  Q
    |||| |||||||||||| ||||||   |||| | ||| |||||| | ||| |||||| ||||| ||||| |||||||||  || |||||||||| |||||    
T  36542260 gagattttatggaaacatcttatgacatgtccagaagctgtttttaacttatttccacaagctctctaggatagcttatggaatcagcttatagcttata 36542359  T
Q  139 tgaaaacggtttga 152  Q
    ||| ||| ||||||    
T  36542360 tgagaacagtttga 36542373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 37063147 - 37063207
Alignment:
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  37063147 ttatatgaaaatagtttgactttattttatct-tttgttatagaaatagtttatacataagc 37063207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 41957430 - 41957535
Alignment:
Q  40 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 139  Q
    |||| ||| ||||||| ||||||   |||| |||||||||||| ||||| ||| |||||| | || || ||||||||| |||||||||||||  ||| ||    
T  41957430 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacat 41957529  T
Q  140 gaaaac 145  Q
    ||||||    
T  41957530 gaaaac 41957535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 36539764 - 36539712
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||| |||||| ||||||| |||||||||||| | |||||||||||||||||    
T  36539764 cttataaaaacaacttatagcttatatgaaaacaggttgactttattttatct 36539712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 39128659 - 39128576
Alignment:
Q  111 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||| |||| || ||||||||||| ||| |||  |||||||||||||||||| ||| |||||||| ||| ||||| ||||||    
T  39128659 agcttataaaaatagtttatagtttatttgagaacaatttgactttattttatct-tttgttatagaattagcttatacataagc 39128576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 41277398 - 41277454
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| |||||| ||| ||  |||||||||||| |||||||||||||||||||    
T  41277398 atagcttatgaaaacaacttttaacttatatgaaaacagtttgactttattttatct 41277454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 165
Target Start/End: Original strand, 583838 - 583877
Alignment:
Q  126 cttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  583838 cttatagcttatatgaaaacagtttgactttattttatct 583877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 3970687 - 3970806
Alignment:
Q  68 tcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctct 167  Q
    |||||||| | |||| | ||| ||| |||||||| || || ||||||||| |||  ||||| ||| ||||| |||| | | ||||||||||||||||| |    
T  3970687 tcaataagctattttcagcttattttcataagctctccagtatagcttatgaaattagcttctagattataagaaagcagattgactttattttatcttt 3970786  T
Q  168 tttttatagaaatagattat 187  Q
     | |||||||||||| ||||    
T  3970787 gtgttatagaaatagtttat 3970806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 6109596 - 6109452
Alignment:
Q  18 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 117  Q
    ||||||||||||  | |||  ||||| ||||||||| || |||||   |||| |||||||||||| | ||| |||||| ||||| || | ||||||| ||    
T  6109596 aacacttgtgagaatattttggagagcttatggaaaaaaattatgatatgtccataagttgttttcagcttatttccaaaagctctcgaacatagctaat 6109497  T
Q  118 taaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
     | || ||||||||| | ||||||||||  | |||||||||||||||    
T  6109496 gagaatagcttatagctaatatgaaaac--tgtgactttattttatc 6109452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 8177581 - 8177620
Alignment:
Q  105 tagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  8177581 tagcatagcttatgaaaacagtttatagtttatatgaaaa 8177620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 15003543 - 15003618
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||| ||| | ||||||||| |||||  ||||||| ||||||||| |  |||||| ||||||||||||    
T  15003543 tttccataagctctcttggatagcttatgaaaaccacttatagcttatatgaagagagtttgattttattttatct 15003618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 35135727 - 35135781
Alignment:
Q  126 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||||||| |||||||||||  ||||||||||||||||||| ||| |||||||||||    
T  35135727 cttatagcttatatgaaaatagtttgactttattttatct-tttgttatagaaata 35135781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 37690598 - 37690756
Alignment:
Q  23 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt-attaaa 121  Q
    |||||||  |||||| ||||| ||||| | ||||| ||||   ||| |||||| |||||| | ||| |||||||||||| || |  ||| ||| || |||    
T  37690598 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaa 37690697  T
Q  122 acagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||| ||||||| ||||||||||||  ||||| || ||||||||| ||| |||||||||||    
T  37690698 acaacttatagcttatatgaaaactttttgatttgattttatct-tttattatagaaata 37690756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 38829698 - 38829768
Alignment:
Q  124 agcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||||||| |||||||  | |||||| ||||||||| ||| ||||| |||||| ||||||||||||    
T  38829698 agcttatagtttatttgaaaaccatatgacttaattttatct-tttattataaaaataggttatatataagc 38829768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 38831486 - 38831587
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 189  Q
    ||||||| |||| ||||  ||||||||  |||||| |||||  |||||| |||||| ||||||||||||||||||| ||| | | |||||||| ||||||    
T  38831486 tttccatcagctatctatgatagcttaa-aaaacaacttatcatttatacgaaaacagtttgactttattttatct-tttataacagaaatagcttatat 38831583  T
Q  190 ataa 193  Q
    ||||    
T  38831584 ataa 38831587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 19369330 - 19369276
Alignment:
Q  114 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctt 168  Q
    |||| ||| ||||||||||||||||||||||| ||| ||  ||||||||||||||    
T  19369330 ttatgaaaccagcttatagtttatatgaaaacagttcgagcttattttatctctt 19369276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 26390760 - 26390893
Alignment:
Q  32 tgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 130  Q
    |||||| ||||| | || ||||||||||||  ||| ||| ||||| |||||| | ||| |||||||||||| || || ||| ||||  ||| || |||||    
T  26390760 tgtttgagagagctgatagaaacaacttatctcatagtccataagctgttttcaccttatttccataagctctccaggataacttaggaaaccatcttat 26390859  T
Q  131 agtttatatgaaaacggtttgactttattttatct 165  Q
    || |||||||||||| |||| || |||||||||||    
T  26390860 agcttatatgaaaacagtttaac-ttattttatct 26390893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 18700475 - 18700399
Alignment:
Q  40 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 117  Q
    |||| ||||||||||||||||||   |||| |||||||||||| | ||| | ||||||||||||| || |||||||||    
T  18700475 agagcttatggaaacaacttatgacatgtctataagttgttttcagctt-tatccataagctttcaaggatagcttat 18700399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 18857450 - 18857503
Alignment:
Q  111 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
    ||||||| |||||||||||||| |||||  |||||  |||||||||||||||||    
T  18857450 agcttatgaaaacagcttatagattatagaaaaacaatttgactttattttatc 18857503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 26209461 - 26209518
Alignment:
Q  109 atagcttattaaaacagcttatagtttata-tgaaaacggtttgactttattttatct 165  Q
    ||||||||| |||||||||||||| ||||| |||||||  || |||||||||||||||    
T  26209461 atagcttatgaaaacagcttatagcttatattgaaaacaattggactttattttatct 26209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 37198111 - 37198184
Alignment:
Q  92 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||| |||||||||||| || ||||||  |||||  ||| |||||| | |||||| ||||||||||||    
T  37198111 tccataagctatctagcatagctaatgaaaacaatttataacttaaatgaaatcagtttgattttattttatct 37198184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 2569679 - 2569779
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    ||||||||| | ||||||   |||| ||||| ||||||||  || | | |||||||||| ||  |||| |||| |||||||||||||| |||||||||||    
T  2569679 ttatggaaatagcttatgacatgtccataagctgttttaagtttatattcataagctttttatgatagtttatgaaaacagcttatagattatatgaaaa 2569778  T
Q  145 c 145  Q
    |    
T  2569779 c 2569779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 8481236 - 8481157
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    ||||| ||||||||||||||| ||||| |||   |||| |||||||||||||| ||| ||||| ||||| |||||| ||||    
T  8481236 cttatgaaaacagcttatagtgtatataaaatttgtttaactttattttatct-tttattatataaataaattatacataa 8481157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 165
Target Start/End: Original strand, 10272415 - 10272535
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    |||| |||||||||||||   ||||  ||||||||||| | ||| ||| ||||| || || |  || |||||| |||||| ||||||| ||||| |||||    
T  10272415 ttatagaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaa 10272514  T
Q  145 cggtttgactttattttatct 165  Q
    |  |||||||| |||||||||    
T  10272515 caatttgacttaattttatct 10272535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 14599353 - 14599425
Alignment:
Q  111 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt-ttatagaaatag 182  Q
    |||||||  ||||| ||||||  |||||||||||| ||||||||| ||||||||  |||| ||||||||||||    
T  14599353 agcttatcgaaacaacttataacttatatgaaaacagtttgacttaattttatcagttttgttatagaaatag 14599425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 15074754 - 15074866
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| ||||| |||||| | ||| ||||||||||||||| || ||| ||||| |||||| ||||||| |   |||||||| |||||| | |||| |||||    
T  15074754 tgtccataagctgttttcagcttatttccataagctttccagtataacttatgaaaacaacttatagct--catgaaaacagtttgattatattctatct 15074851  T
Q  166 cttttttatagaaata 181  Q
     ||| |||||||||||    
T  15074852 -tttattatagaaata 15074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 18704041 - 18704167
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| |||||||||||| | ||| |||||||||| | | |   ||||||||| |||||| ||||||| |||||| ||||  | ||||||||| |||||||    
T  18704041 tgtctataagttgttttcagcttatttccataagatctttgtaatagcttatgaaaacaacttatagcttatataaaaatagcttgacttta-tttatct 18704139  T
Q  166 cttttttatagaaatagattatatataag 194  Q
     ||| |||||||||||  ||||| |||||    
T  18704140 -tttgttatagaaataacttatacataag 18704167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 19177491 - 19177416
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||| ||||||| |||||||||||| ||| ||||| ||||||||| | | || ||||||||| ||||| ||||||    
T  19177491 aaaacaacttatagcttatatgaaaacagttagacttaattttatct-tctgttgtagaaatagtttatacataagc 19177416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 26516422 - 26516366
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| ||||||| |||||  ||||||||||   |||||||||||||||||||    
T  26516422 atagcttatgaaaacagtttataacttatatgaaagtagtttgactttattttatct 26516366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 29116998 - 29117049
Alignment:
Q  129 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    |||| ||||| |||||| ||||||||||||||||||| ||| |||||||||||    
T  29116998 atagcttatacgaaaacagtttgactttattttatct-tttgttatagaaata 29117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 35550970 - 35550915
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| |||| ||||||||||||||||||||||||||    |||||||||||||||||    
T  35550970 ataggttataaaaacagcttatagtttatatgaaaa-taattgactttattttatct 35550915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 41017745 - 41017697
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 161  Q
    ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||    
T  41017745 cttatgaaaacaacttatagcttataggaaaatggtttgactttatttt 41017697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 17952749 - 17952835
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagct 196  Q
    ||||||||| |||||| ||| ||| |||||||||||  ||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  17952749 atagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatct-tttgttatagaaatagcttatatataagct 17952835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 164
Target Start/End: Complemental strand, 9556331 - 9556206
Alignment:
Q  39 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 138  Q
    ||||| ||||| |||||||| |||   |||| |||||| | ||| | ||| ||| |||||||||||||| ||||||||| ||||||| |||||| || ||    
T  9556331 gagagcttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagctttctaggatagcttatgaaaacagtttatagcttgta 9556232  T
Q  139 tgaaaacggtttgactttattttatc 164  Q
    |||||||   ||||||||||||||||    
T  9556231 tgaaaacacgttgactttattttatc 9556206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 33256759 - 33256706
Alignment:
Q  112 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  33256759 gcttatgaaaactgcttatagtttatatgaaaacagtttgactttattttatct 33256706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 6227811 - 6227701
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 170  Q
    |||||||||||| | |||||| ||||||||| || |  ||||||||| |||||  |||||||||||||| |||||||||| | || ||||||||| |||     
T  6227811 ataagttgttttcagcttgttaccataagctctccaaaatagcttatgaaaaccacttatagtttatataaaaacggtttaatttaattttatct-tttg 6227713  T
Q  171 ttatagaaatag 182  Q
    ||||| ||||||    
T  6227712 ttatataaatag 6227701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 12215845 - 12215744
Alignment:
Q  93 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatata 192  Q
    ||||||||| || || || |||||| ||||||||||||||  |||||| |||||| | ||||||||||||||| ||| || ||||||||| ||||| |||    
T  12215845 ccataagctctcaaggatggcttataaaaacagcttatagcatatatggaaacgggtcgactttattttatct-tttgttgtagaaatagtttatacata 12215747  T
Q  193 agc 195  Q
    |||    
T  12215746 agc 12215744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 22681195 - 22681289
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||| |||||| | ||| |||||||||| | ||||| |||| |||| |||||||||||||| ||||||||||||  |||| |||| ||||||||    
T  22681195 ataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatct 22681289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 191
Target Start/End: Original strand, 1939323 - 1939461
Alignment:
Q  52 aacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag-tttatatgaaaacggttt 150  Q
    |||||||||||   |||| ||||| |||||| | ||| |||||||||||| || || ||||||||| ||||||| |||||| |  |||||||||  ||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaacag-ttatagctcaatatgaaaatagttt 1939421  T
Q  151 gactttattttatctcttttttatagaaatagattatatat 191  Q
     |||||||||||||| ||| |||||||||||  ||||||||    
T  1939422 cactttattttatct-tttgttatagaaataacttatatat 1939461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 5043608 - 5043664
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| |||||| ||| ||| |||||||||||| |||||||||||||||||||    
T  5043608 atagcttatgaaaacaacttctagcttatatgaaaacagtttgactttattttatct 5043664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 11513920 - 11513864
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| |||||| ||||||| ||||||||||||  ||||||||||||||||||    
T  11513920 atagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatct 11513864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 165
Target Start/End: Complemental strand, 43141953 - 43141837
Alignment:
Q  49 ggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggt 148  Q
    ||||||||||||||   || | |||||||||||| || || ||||||||| || |  || ||||||||| |||||| ||||||| ||||||| ||||  |    
T  43141953 ggaaacaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaacaat 43141854  T
Q  149 ttgactttattttatct 165  Q
    ||||||||| |||||||    
T  43141853 ttgactttactttatct 43141837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 7103492 - 7103587
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa-cagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||| | ||| ||| || || || ||||  ||||||||| |||| |||||||||| |||||| ||||| |||||||||||||||||||    
T  7103492 ataagttgtttttagcttattttcacaaactctctaagatagcttatgaaaaacagcttatagcttatattaaaacagtttgactttattttatct 7103587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 28803537 - 28803639
Alignment:
Q  92 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatat 191  Q
    |||||||||| || || |||| |||  |||||| ||| ||| |||||||||| | ||||||||||||||||||| ||| |||| ||||||  ||||||||    
T  28803537 tccataagctctccaggatagtttaagaaaacaacttgtagcttatatgaaatcagtttgactttattttatct-tttgttatcgaaataacttatatat 28803635  T
Q  192 aagc 195  Q
    ||||    
T  28803636 aagc 28803639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 33267556 - 33267649
Alignment:
Q  94 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    |||||||| || |||||||||||| ||||||||||||       |||||||| |||| ||||||||||| || ||| |||||||||||||||||| ||||    
T  33267556 cataagctctccagcatagcttataaaaacagcttat-------atgaaaacagtttaactttatttta-ctgtttgttatagaaatagattatacataa 33267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 13866911 - 13866826
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||| || |||| ||||||||| |||||| ||||| ||||||||| ||||||||| |||  ||||||||||| ||||| ||||||    
T  13866911 atagctaatgaaaagagcttatagattatataaaaacagtttgacttaattttatct-tttgctatagaaatagtttatacataagc 13866826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 195
Target Start/End: Original strand, 18962086 - 18962171
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||| |||| || |||||| |||||||||||| |||| |||||||||||||| ||| ||||| |||||| | ||| ||||||    
T  18962086 atagcttatgaaaatagtttatagcttatatgaaaacagtttaactttattttatct-tttgttataaaaatagctaatacataagc 18962171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 32098384 - 32098441
Alignment:
Q  137 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||  |||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  32098384 tatgaaaacactttgactttattttatct-tttgttatagaaatagcttatatataagc 32098441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 161
Target Start/End: Original strand, 33525945 - 33526067
Alignment:
Q  39 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 138  Q
    ||||||| |||||||||||||||    |||| |||||||| ||| | ||| |||| |||| | |||||| ||||||||| |||| |||||||    ||||    
T  33525945 gagagttcatggaaacaacttataacatgtccataagttggtttcagcttatttctataaaccttctagtatagcttatgaaaaaagcttattacatata 33526044  T
Q  139 tgaaaacggtttgactttatttt 161  Q
    ||||||  |||||||||||||||    
T  33526045 tgaaaatagtttgactttatttt 33526067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 3059303 - 3059372
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttata-gtttatatgaaaacggtttgactttat 158  Q
    ||||||||| || ||||||||||||||| |||||| || | | |||||||||||||| ||||||||||||    
T  3059303 tttccataaactctctagcatagcttatgaaaacaactcacaagtttatatgaaaacagtttgactttat 3059372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 195
Target Start/End: Complemental strand, 5133813 - 5133709
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 189  Q
    |||||||||||| |||   ||| ||| | |||||||||||||  |||||| ||||| ||||  ||||||||||||| ||| |||||||||||| |||||     
T  5133813 tttccataagctctcttagataacttttgaaaacagcttatatcttatataaaaacagtttatctttattttatct-tttgttatagaaatagcttatac 5133715  T
Q  190 ataagc 195  Q
    ||||||    
T  5133714 ataagc 5133709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 25790185 - 25790065
Alignment:
Q  72 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 171  Q
    |||| |||||| | ||| ||| |||||||| || || |||| ||||  |||||  || ||| |||||||||||| ||||||||| | ||||||| |||||    
T  25790185 taagctgttttgaacttattttcataagctctccaggatagattatccaaacaatttgtagcttatatgaaaacagtttgacttcactttatct-ttttt 25790087  T
Q  172 tatagaaatagattatatataa 193  Q
    |||||||||| |||||| ||||    
T  25790086 tatagaaatatattatacataa 25790065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 28039315 - 28039436
Alignment:
Q  44 tttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 143  Q
    |||||| |||||| |||||  ||||  ||||| |||||| | ||| |||||||||  |||| |  | ||||||| ||||  |||||||||||||||||||    
T  28039315 tttatgaaaacaagttatgacttgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaa 28039414  T
Q  144 acggtttgactttattttatct 165  Q
    ||  || |||||||||||||||    
T  28039415 acaattggactttattttatct 28039436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 33192190 - 33192130
Alignment:
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||||| ||||||||||||||||||| | | |||||||||||| || |||||||||    
T  33192190 ttatatgaaaacagtttgactttattttatct-tatgttatagaaatagtttttatataagc 33192130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 33942169 - 33942116
Alignment:
Q  112 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||| |||||| ||||||| ||| |||||||| |||||||||||||||||||    
T  33942169 gcttatgaaaacaacttatagcttacatgaaaacagtttgactttattttatct 33942116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 37034038 - 37033982
Alignment:
Q  137 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  37034038 tatgaaaatcgtttgactttattttatct-ttttttatagaaatagtttatacataag 37033982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 41809202 - 41809299
Alignment:
Q  18 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt 115  Q
    ||||||||||||  || |||| |||| || |||||||||||||||   |||  |||||||||||| | ||| |||||||||||||||||  |||||||    
T  41809202 aacacttgtgagactgattgtaagagcttgtggaaacaacttatgacatgttcataagttgtttttagcttatttccataagctttctaagatagctt 41809299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 14666633 - 14666514
Alignment:
Q  46 tatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 145  Q
    |||||||||||||||||   |||  ||| |||||||| | ||| ||| ||||||| | | |  ||||||| | |||||| ||||||  |||||||||| |    
T  14666633 tatggaaacaacttatgacatgttcataggttgttttcaccttattttcataagcataccaagatagcttgtgaaaacaacttataacttatatgaaatc 14666534  T
Q  146 ggtttgactttattttatct 165  Q
     |||||||||||||||||||    
T  14666533 agtttgactttattttatct 14666514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 18066150 - 18066099
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 160  Q
    ||||||||| |||||||||||||| ||||||||||||  ||| |||||||||    
T  18066150 atagcttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 18840861 - 18840762
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||||||||||| ||||| |||||||||||| || |  | | ||||| ||| ||||||||||  ||||| ||||  | ||| |||||||||||||    
T  18840861 tgtcaataagttgttttcatcttatttccataagctctccaagacatcttataaaaccagcttatagaatatattaaaatagcttggctttattttatct 18840762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 18884883 - 18884832
Alignment:
Q  130 tagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    |||| ||||||||||| |||||| |||||||||| | |||||||||||||||    
T  18884883 tagtgtatatgaaaacagtttgattttattttatattttttttatagaaata 18884832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 34054936 - 34055034
Alignment:
Q  96 taagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||| | ||| ||||||||| |||||| ||||||   |||||| |||| ||||| ||||||||||||| ||| ||||||||||||  |||| ||||||    
T  34054936 taagctctataggatagcttatgaaaacaccttatatcatatatgtaaacagtttgcctttattttatct-tttgttatagaaatagcctatacataagc 34055034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 193
Target Start/End: Complemental strand, 42458041 - 42457887
Alignment:
Q  39 gagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttat 137  Q
    ||||||||||| ||||||||||   |||| ||||||||||||||| | ||| ||| |||| | | ||||  ||||||||| || |||||| | || |||     
T  42458041 gagagtttatgaaaacaacttaaaacattttcaataagttgttttcagcttattttcatatgttctctaagatagcttatgaatacagctaagagcttaa 42457942  T
Q  138 atgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    |  |||||  ||| |||||||||||||| |||  ||||||||||||||||| ||||    
T  42457941 acaaaaacaatttaactttattttatct-tttactatagaaatagattatacataa 42457887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 3235442 - 3235483
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttatttt 161  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  3235442 aaaacagcttatagtttatatg-aaacagtttgactttatttt 3235483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 4550789 - 4550743
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||| |||||||||||||||||||| | ||||| |||||||||||    
T  4550789 aaaacaacttatagtttatatgaaaacagcttgacgttattttatct 4550743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 13736326 - 13736392
Alignment:
Q  94 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 160  Q
    |||||||| ||||| ||||||||| |||||||||||||| | || ||||||  ||||||||| ||||    
T  13736326 cataagctctctagtatagcttatgaaaacagcttatagctgatgtgaaaatagtttgacttcattt 13736392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 15377787 - 15377702
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||| |||||||||||||  ||||||||||||  | | ||||||||||||| ||||  ||||||| ||| ||||| ||||||    
T  15377787 atagcttatgaaaacagcttataacttatatgaaaacaatctaactttattttatc-ctttggtatagaagtagcttataaataagc 15377702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 195
Target Start/End: Complemental strand, 25609882 - 25609733
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    ||||||||||||||||||     || ||| |||||||| |  || ||||| ||| |||||||| |||  || | |||||| ||||||| ||||| |||||    
T  25609882 ttatggaaacaacttatgacaaatccatatgttgttttcaatttctttccttaaactttctagtataatttctaaaaacaacttatagcttatacgaaaa 25609783  T
Q  145 cggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
        ||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  25609782 taaattgactttattttatct-tttcttatagaaatagcttatacataagc 25609733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 30537537 - 30537658
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 170  Q
    ||||| |||||||  ||| ||||  |||||| || || ||||||||  | || ||||||||| |||||||||||| |||||||||||| | |||| ||      
T  30537537 ataagctgttttaggcttatttcattaagctctccagaatagcttacgagaatagcttatagcttatatgaaaactgtttgactttatatgatct-ttag 30537635  T
Q  171 ttatagaaatagattatatataa 193  Q
    |||||||||||| ||| ||||||    
T  30537636 ttatagaaatagcttacatataa 30537658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 6547285 - 6547248
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaac 57  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  6547285 cacttgtgagactgtttgtgagagtttatggaaacaac 6547248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 7283079 - 7283002
Alignment:
Q  48 tggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacag 125  Q
    |||||||||||||||   |||| |||||||||||| ||||| | |||||||||| ||   |||||||||| |||||||    
T  7283079 tggaaacaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacatagcttatgaaaacag 7283002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 9478398 - 9478265
Alignment:
Q  32 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 131  Q
    |||||| ||||||||||| |||||||||||    |||| ||||| |||||| |||||  |||||| | || || |  ||||||||  || ||||| ||||    
T  9478398 tgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttcatcttacttccatcaactctccacgatagcttacgaacacagcatata 9478299  T
Q  132 gtttatatgaaaacggtttgactttattttatct 165  Q
    | |||||||||||   ||||| ||||||||||||    
T  9478298 gcttatatgaaaatattttgagtttattttatct 9478265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 11488388 - 11488277
Alignment:
Q  18 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 117  Q
    ||||||| | || |||||| |||||| ||||| |||||||||||| || |||| ||||||||||| | ||| ||| ||||| || || || |||||||||    
T  11488388 aacacttttaagattgtttatgagagcttatgaaaacaacttatg-atggtca-taagttgttttcagcttatttgcataatctctccaggatagcttat 11488291  T
Q  118 taaaacagcttata 131  Q
     ||| |||||||||    
T  11488290 gaaagcagcttata 11488277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 30552614 - 30552727
Alignment:
Q  32 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagtt-gttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 130  Q
    |||||| || || |||| |||||||||||||   |||||||||||| ||||| | ||| |||||||||||| ||||| |||| |||| |||| |  ||||    
T  30552614 tgtttgagataggttatcgaaacaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaataatttat 30552713  T
Q  131 agtttatatgaaaa 144  Q
    || | |||||||||    
T  30552714 agctgatatgaaaa 30552727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 31461421 - 31461377
Alignment:
Q  148 tttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    |||||||||||||||||| ||| |||||||||||| ||||||||||    
T  31461421 tttgactttattttatct-tttgttatagaaatagcttatatataa 31461377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 31740019 - 31740079
Alignment:
Q  121 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    |||| ||||||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||    
T  31740019 aacaacttatagcttatatgaaaatagtttgactttattttatct-ttagttatagaaatag 31740079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 42817387 - 42817480
Alignment:
Q  72 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||||| | |||  ||||||||||| |  || ||||||||| ||||||| ||||   |||||||||||| | ||||||| |||||||||    
T  42817387 taagttgtttttagcttacttccataagctcttcagaatagcttatgaaaacagtttattacttatatgaaaacagcttgacttcattttatct 42817480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 9395142 - 9395083
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaa 179  Q
    |||||||||||||| ||||||||||||  |||  ||||||||||||| |||| ||||||||    
T  9395142 aaaacagcttatagattatatgaaaacaatttagctttattttatct-ttttctatagaaa 9395083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 9551599 - 9551547
Alignment:
Q  111 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    ||||||| |||| || ||||||||||||  ||||| |||||||||||||||||    
T  9551599 agcttatgaaaataggttatagtttatacaaaaacagtttgactttattttat 9551547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 25800851 - 25800815
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaac 145  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  25800851 atagcttatgaaaacagcttatagcttatatgaaaac 25800815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 26282057 - 26282117
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggttt 150  Q
    ||||||||||||||| |  ||||| ||| | ||||||||||||||||||||| ||| ||||    
T  26282057 tttccataagctttccatgatagcctatgacaacagcttatagtttatatgataacagttt 26282117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 29430765 - 29430695
Alignment:
Q  121 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    |||||||||||| ||||| |||||| ||||||||||| |||| || ||| |||||||||||| ||||| ||||    
T  29430765 aacagcttatagcttataagaaaacagtttgacttta-tttaact-tttgttatagaaatagcttatacataa 29430695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 32821900 - 32821808
Alignment:
Q  40 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag 132  Q
    ||||||||| |||||||||||||   |||| ||||| |||||| |  || |||| ||||||| | ||| ||||||||| ||||||| ||||||    
T  32821900 agagtttatagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtttatag 32821808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 37766810 - 37766766
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    |||||| ||||||||||||| ||||||  ||||||||||||||||    
T  37766810 aaaacaacttatagtttatacgaaaacattttgactttattttat 37766766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 43299451 - 43299507
Alignment:
Q  110 tagcttattaaaacagcttatag-tttatatgaaaacggtttgactttattttatct 165  Q
    |||||||| |||||| ||||||| ||||||  ||||| |||||||||||||||||||    
T  43299451 tagcttatgaaaacaacttatagatttatacaaaaacagtttgactttattttatct 43299507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 5e-18; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 24929580 - 24929443
Alignment:
Q  44 tttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 143  Q
    |||||||||||| ||||||   |||  |||| ||||||| | ||| |||||||||||| ||||| | || |||| |||||| ||||||| || |||||||    
T  24929580 tttatggaaacagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaa 24929481  T
Q  144 acggtttgactttattttatctcttttttatagaaatag 182  Q
    || ||| ||||||||||||||| ||| ||||||||||||    
T  24929480 acagttagactttattttatct-tttgttatagaaatag 24929443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 4071989 - 4071822
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 119  Q
    ||||||||||  |||||| ||||| ||||| ||||| ||||||  ||||   ||||||||||| | ||| | |||||||||| ||||   |||||||| |    
T  4071989 cacttgtgagactgtttgagagagcttatgaaaacagcttatgatttgttggtaagttgttttcagctt-tgtccataagctctcta---tagcttatca 4071894  T
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
     |||| ||||||| |||||||||||   |||||||||||||||||| ||| |||||||||||| ||||||||||    
T  4071893 taacaacttatagcttatatgaaaataatttgactttattttatct-tttgttatagaaatag-ttatatataa 4071822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 44319986 - 44319894
Alignment:
Q  94 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    |||||| | ||||| ||||||||| |||| ||||| ||| |||||||||||| ||| ||||||||||||  |||||||||||||||||| |||||    
T  44319986 cataagttctctaggatagcttatcaaaatagcttgtagcttatatgaaaacagttcgactttatttta--tcttttttatagaaatagtttata 44319894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 54325085 - 54325163
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    ||||||| | |||| ||||||||| |||||||||||| ||||||||||||||||||| ||| | |||||||||| |||||    
T  54325085 atagcttttgaaaatagcttatagcttatatgaaaacagtttgactttattttatct-tttgtaatagaaatagtttata 54325163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 30338650 - 30338725
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||| |||||| |||||||||||| |||| |||||||| ||||| ||| |||||||||||| ||||| ||||||    
T  30338650 aaaacagtttatagcttatatgaaaacagtttaactttattctatct-tttgttatagaaatagtttatacataagc 30338725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 24091549 - 24091434
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    ||||||||||||||||||  |||   || ||||||||| |  |||||||||||| | ||| || ||| ||||| ||||||| |||||| |||||||||||    
T  24091549 ttatggaaacaacttatgatttgcacattagttgttttcagtttgtttccataaaccttccaggataacttatgaaaacagtttatagcttatatgaaaa 24091450  T
Q  145 cggtttgactttattt 160  Q
       |||||||||||||    
T  24091449 taatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 45128280 - 45128442
Alignment:
Q  31 ttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 130  Q
    ||||||| ||||| |||||||||||||| ||    |||| || || |||||| | ||| |||||||||||||| ||| | || |||| ||||||  ||||    
T  45128280 ttgtttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataagctttataggacagtttatgaaaacaatttat 45128379  T
Q  131 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    || |||||||| ||   ||||| || ||||||||| ||| |||||||||||| ||||| |||||    
T  45128380 agcttatatgagaataatttgatttgattttatct-tttgttatagaaatagtttatacataag 45128442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 53626795 - 53626729
Alignment:
Q  112 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaa 179  Q
    |||||| |||||||||||||| ||||||||||||  ||||| |||||||||||| ||| |||||||||    
T  53626795 gcttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatct-tttgttatagaaa 53626729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 7694020 - 7694114
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||| | ||| ||||||||| || || || ||| ||||| |||||||||||||| |||||  ||||| ||||||||| |||| ||||    
T  7694020 ataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaacagtttgacttcatttcatct 7694114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 30581700 - 30581790
Alignment:
Q  84 atcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttat 174  Q
    ||||| ||||||||| || || |  ||| |||||||||||||||||||| ||||| |||||  ||||||||| ||||||||| || |||||    
T  30581700 atcttatttccataaactctccaagataacttattaaaacagcttatagcttatacgaaaatagtttgacttcattttatcttttatttat 30581790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 49219199 - 49219090
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 170  Q
    |||||||||||| | ||| ||||||||| || | ||  |||| |||| |||||| ||||||| |||||||||||   |||||||||||||||| | |||     
T  49219199 ataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatat-tttg 49219101  T
Q  171 ttatagaaata 181  Q
    |||||||||||    
T  49219100 ttatagaaata 49219090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 55870390 - 55870467
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    |||||||| |||||| ||||||| |||| ||||||| |||||||||||||| |||| ||| ||||| |||| |||||||    
T  55870390 tagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttatttgatct-tttgttataaaaatggattata 55870467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 11389531 - 11389463
Alignment:
Q  126 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||||||| ||||| |||| |||||| ||||||| |||||||||||||||  ||||| ||||||    
T  11389531 cttatagtttatattaaaacagtttaactttactttatct-ttttttatagaaataatttatacataagc 11389463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 18020013 - 18019944
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttata-gtttatatgaaaacggtttgactttat 158  Q
    ||||||||| || ||||||||||||||| |||||| || | | |||||||||||||| ||||||||||||    
T  18020013 tttccataaactctctagcatagcttatgaaaacaactcacaagtttatatgaaaacagtttgactttat 18019944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 23819197 - 23819057
Alignment:
Q  23 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct-ttctagcatagcttattaaa 121  Q
    |||||||  ||||||  |||||||| | ||||| ||||||   |||| |||||||||||| ||||| |||| ||||||| ||| || ||||||||| |||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaag-atagcttatgaaa 23819099  T
Q  122 acagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    |||  |||||  |||||||||||| ||||||||  |||||||    
T  23819098 acatgttataacttatatgaaaacagtttgactacattttat 23819057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 27123312 - 27123392
Alignment:
Q  21 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct 101  Q
    |||||||||  |||||| ||||| ||||||||||||||||||   ||||  ||||||||||| | ||| ||||||||||||    
T  27123312 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagct 27123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 36734893 - 36734830
Alignment:
Q  131 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||||||||  |||||||||||||||| || ||| ||||||||| |||||||| ||||||    
T  36734893 agtttatatgaaaatagtttgactttattttacct-tttgttatagaaagagattatacataagc 36734830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 46859952 - 46859896
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| |||| |||||||||||||| || |||||||| | ||||||||||||||||||    
T  46859952 ataggttataaaaacagcttatagattgtatgaaaatgatttgactttattttatct 46859896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 13949893 - 13949948
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||  ||||| ||||||| ||||||||||||  ||||||||||||||||||    
T  13949893 tagcttatacaaacaacttatagcttatatgaaaacaatttgactttattttatct 13949948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 30207582 - 30207672
Alignment:
Q  72 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    |||| |||||| | ||| ||||||||| || ||||   |||||||| |||||| ||||||| |||||||||||| |||||| ||||||||||    
T  30207582 taagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagtttga-tttattttat 30207672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 195
Target Start/End: Original strand, 32066453 - 32066542
Alignment:
Q  104 ctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||| ||||||||| |||||||||||||| | ||||||| ||||||| | |||||||||||| ||| ||||| || ||| ||||| ||||||    
T  32066453 ctaggatagcttataaaaacagcttatagctcatatgaacacggttt-aatttattttatct-tttgttataaaagtagtttatacataagc 32066542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 6987703 - 6987845
Alignment:
Q  23 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 122  Q
    |||||||  |||||| ||||| ||||||| ||||||||||   |||| ||||  | |||| | ||| |||||||||||| || || ||||| ||  ||||    
T  6987703 ttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctctccaggatagcgtaaaaaaa 6987802  T
Q  123 cagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
     | || |||||| ||| |||||| |||||||||| ||||||||    
T  6987803 taactaatagttaatacgaaaacagtttgactttgttttatct 6987845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 18630702 - 18630625
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 187  Q
    ||||||| | |||||| ||||||| ||||||||||||   ||||||||||||||||| ||| |||| ||||||| ||||    
T  18630702 atagcttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatct-tttgttattgaaatagtttat 18630625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 19422420 - 19422355
Alignment:
Q  129 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||||||||||  ||||||||||||| ||||| ||| |||||||||||  ||||| ||||||    
T  19422420 atagtttatatgaaaaatgtttgactttattatatct-tttgttatagaaataacttatacataagc 19422355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 21157822 - 21157736
Alignment:
Q  77 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    |||||| | ||| |||||||||||| |  || ||||| ||| |||||| ||||||| ||| |||||||| ||||||||||| |||||    
T  21157822 tgtttttagcttatttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaacagtttgactttagtttat 21157736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 24444060 - 24444006
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    ||||||||| |||||| ||||||| |||||||||||  |||||| ||||||||||    
T  24444060 atagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttat 24444006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 29373939 - 29374020
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||| ||||||  |||||| ||||||||| ||  |||||| ||||||||||| | | |||||||||||| ||||||||||||    
T  29373939 cttatgaaaacaaattatagcttatatgaatacattttgacattattttatct-tctgttatagaaatagcttatatataagc 29374020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 31038877 - 31038971
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||| | ||| |||| ||||| | ||||  | ||||||| ||||  |||||||  ||||||||||||  ||||||||||||||||||    
T  31038877 ataagttgttttcaacttatttctataagttctctattagagcttataaaaatggcttataacttatatgaaaacaatttgactttattttatct 31038971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 2841732 - 2841675
Alignment:
Q  25 gtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgtttt 82  Q
    ||||| ||||||| ||||||||||| || |||||||||   |||||||||||||||||    
T  2841732 gtgagattgtttgcgagagtttatgaaagcaacttatgacatgtcaataagttgtttt 2841675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 2996672 - 2996539
Alignment:
Q  32 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 131  Q
    |||||| ||||| ||||| ||||||||||||   |||| ||||| | |||| | ||| ||| |||| ||| || |  ||||||||| |||||| ||||||    
T  2996672 tgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttata 2996573  T
Q  132 gtttatatgaaaacggtttgactttattttatct 165  Q
      |||||| |||||  ||||||| ||||||||||    
T  2996572 acttatataaaaacaatttgactgtattttatct 2996539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 3891611 - 3891542
Alignment:
Q  95 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
    ||||||| ||||| ||||||||| |||||| |||| |  |||||  ||||||||| ||||||||||||||    
T  3891611 ataagctctctaggatagcttataaaaacaacttacatattatacaaaaacggttcgactttattttatc 3891542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 8422897 - 8422970
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||| ||||||| ||||||||||||    |||||||||||||||| ||||||||| |||||| ||||| ||||||    
T  8422897 aaaacaacttatagcttatatgaaaac--aatgactttattttatct-ttttttataaaaatagcttatacataagc 8422970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 21953297 - 21953217
Alignment:
Q  107 gcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    ||||||||||| ||||  |||||||| |||||| ||||  |||||||||||||||  || ||| |||||||||||| |||||    
T  21953297 gcatagcttatcaaaatggcttatagcttatataaaaagagtttgactttattttccct-tttgttatagaaatagtttata 21953217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 32724116 - 32724056
Alignment:
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||||  ||||||||||||||||||| ||| | |||||||||||||| | ||||||    
T  32724116 ttatatgaaaatagtttgactttattttatct-tttgtaatagaaatagattagacataagc 32724056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 32920431 - 32920504
Alignment:
Q  92 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||| ||||  || ||| ||||| |||||| ||||||| || ||| |||||| ||||||||||||||||||    
T  32920431 tccataaacttttcaggataacttatgaaaacaacttatagcttctattaaaacgatttgactttattttatct 32920504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 42321937 - 42321982
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
    |||||| |||||| |||||||||||||  |||||||||||||||||    
T  42321937 aaaacaacttataatttatatgaaaacaatttgactttattttatc 42321982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 42866108 - 42866047
Alignment:
Q  91 ttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttga 152  Q
    ||||||||||| || || ||||||||| |||||| ||||||| |||||| ||||| ||||||    
T  42866108 ttccataagctctcaaggatagcttatgaaaacaacttatagcttatataaaaacagtttga 42866047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 43824343 - 43824270
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    |||||||||||| | ||| ||||||||||||||| || ||| ||||  |||| ||||||||  |||||||||||    
T  43824343 ataagttgttttcagcttatttccataagctttccaggataacttacgaaaaaagcttataacttatatgaaaa 43824270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 50746017 - 50745937
Alignment:
Q  114 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||| |||||| ||| |||||||||| ||||| |||||| |||||||||||| ||| ||||| |||||| ||| | ||||||    
T  50746017 ttataaaaacaacttgtagtttatataaaaacagtttgattttattttatct-tttgttataaaaatagcttagacataagc 50745937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 927498 - 927442
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||  |||||  |||||| |||||||||||| |||||||||||||| ||||    
T  927498 atagcttatgcaaacaagttatagcttatatgaaaacagtttgactttatttcatct 927442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 3175973 - 3175917
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| |||||||||||||  |||  |||||||  ||||||||||||||||||    
T  3175973 atagcttatgaaaacagcttataacttacttgaaaacaatttgactttattttatct 3175917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 187
Target Start/End: Original strand, 7368090 - 7368181
Alignment:
Q  96 taagctttctagcatagcttattaaaacagcttata-gtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 187  Q
    |||||| ||||| |||||||||  ||||| |||||| | ||||||||||||  ||||||||||||||| || ||| | |||||||||| ||||    
T  7368090 taagctctctagaatagcttatggaaacaacttataagcttatatgaaaacaatttgactttatttta-ctttttatcatagaaatagtttat 7368181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 18628555 - 18628643
Alignment:
Q  73 aagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 161  Q
    |||||||||| | ||| |||||||||||| || |  ||| ||||| ||||||| |||||  |||||| ||||| |||||||| ||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgactatatttt 18628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 41097295 - 41097343
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 161  Q
    ||||| |||||||||||||| | |||||||||| ||||||||| |||||    
T  41097295 cttatgaaaacagcttataggtaatatgaaaacagtttgacttaatttt 41097343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 41701514 - 41701561
Alignment:
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    ||||||||||||| |||||||||||||||||| ||| ||||| ||||||    
T  41701514 ttatatgaaaacgatttgactttattttatct-tttgttatataaatag 41701561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 51630133 - 51630077
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| |||| ||||||||| |||||| |||||  ||| ||||||||||||||    
T  51630133 atagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatct 51630077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 56055810 - 56055739
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 143  Q
    |||||||||||| ||||| ||| ||||||| ||| || ||||||  |||||| ||||||||| ||||||||||    
T  56055810 ataagttgtttttatcttattttcataagc-ttccaggatagctagttaaaatagcttatagcttatatgaaa 56055739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 9527140 - 9527223
Alignment:
Q  111 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||| ||| ||||||| ||||  |||||||||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaacagtttgactttattatatct-tttgttatagatatagcgtatatataagc 9527223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 3802187 - 3802265
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    ||||||| | ||||||||||||| |||||||||||||| ||||||||||||||| || ||| |||||||||||| |||||    
T  3802187 atagcttttaaaaacagcttataatttatatgaaaacgatttgactttattttacct-tttattatagaaatagcttata 3802265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 11208471 - 11208386
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||| |||||| | ||||||||||||||||||||||||| |||||||||||| ||| || ||||| ||  ||||||||||||    
T  11208471 atagcttatgaaaacaacatatagtttatatgaaaacggtttgagtttattttatct-tttgttgtagaattatcttatatataagc 11208386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 27121557 - 27121718
Alignment:
Q  24 tgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 122  Q
    |||||| ||||||| ||||||||||||||| | |||||| ||||  ||||||| |||||| | |||||||||||||||| || || |||||||||| | |    
T  27121557 tgtgagattgtttgggagagtttatggaaatagcttatgacatt--caataagctgttttcaacttgtttccataagctctcaagtatagcttatttaca 27121654  T
Q  123 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    ||||       ||||||||||||  |||||||||||||||||  ||| |||||||||||  ||||| |||||    
T  27121655 cagc-------ttatatgaaaacaatttgactttattttatc-atttattatagaaatatcttatacataag 27121718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 48157082 - 48157239
Alignment:
Q  23 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 122  Q
    |||||||  |||||| ||||| |||| ||||||||||||||  |||| ||||| |||||| | ||| |||||||||| | ||  | ||||||| | ||||    
T  48157082 ttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaa 48157181  T
Q  123 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||  |||||| |||||| |||||  ||| |||||||||||||| ||| |||||||||||    
T  48157182 caaattatagcttatattaaaacaatttcactttattttatct-tttattatagaaata 48157239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 195
Target Start/End: Complemental strand, 33894738 - 33894560
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctta--- 116  Q
    ||||||||||  |||||||||||| ||||| ||||| | ||||   |||| |||||||||||| | ||| |||| |||| ||||| || ||||||||       
T  33894738 cacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttcaataaactttccaggatagcttaagt 33894639  T
Q  117 --ttaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
      | |||||| | || || |||||||||||| ||||||| ||||||||||| ||| |||||||||||| ||||| ||||||    
T  33894638 tgtaaaaacaacataaagcttatatgaaaacagtttgac-ttattttatct-tttgttatagaaatagcttatacataagc 33894560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 47004108 - 47004026
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    |||||||| |||||||||||||||| |||| ||||  |||||||||||||||||||  || |||||||||||| ||| ||||||    
T  47004108 tagcttatgaaaacagcttatagttcatataaaaatagtttgactttattttatct-attgttatagaaatagcttacatataa 47004026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 38010774 - 38010680
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||| |||||| | ||| |||||||||| | ||||| |||| |||| |||||||||||||| ||||||||||||  |||| |||| ||||||||    
T  38010774 ataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatct 38010680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 4966266 - 4966094
Alignment:
Q  21 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaa 120  Q
    |||||||||  |||||  ||||| |||| ||||| |||||||   |||| |||||||||||| |  || |||||||||||| |  || || |||||| ||    
T  4966266 acttgtgagactgtttaggagagcttatagaaaccacttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggcttatgaa 4966167  T
Q  121 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    |||||||||||  | |||||||||| ||||||  |||||||||| |||| || | ||||||  |||||||||||    
T  4966166 aacagcttatacctaatatgaaaactgtttgatattattttatc-ctttgttgtggaaataacttatatataag 4966094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 27481253 - 27481425
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 119  Q
    |||||||||| ||||||||||||| |||| | || |||||| |   |||| ||||  ||||||    || |||||||||||| || |  ||||||||| |    
T  27481253 cacttgtgagattgtttgtgagagcttatagcaataacttacgatatgtctataaactgttttgggtttatttccataagctatccatgatagcttatga 27481352  T
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    ||| | ||||||| ||||||| |||| |||||||||  ||||||| |||| |||||||||||| ||||| ||||    
T  27481353 aaataacttatagcttatatggaaacagtttgacttcgttttatc-ctttgttatagaaatagcttatacataa 27481425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 17989073 - 17989125
Alignment:
Q  111 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    ||||||| ||||||  ||||||||||||||||||| |||||||||||||||||    
T  17989073 agcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttat 17989125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 195
Target Start/End: Original strand, 28340878 - 28340977
Alignment:
Q  95 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||||||| |||  |||||||| |||| |||| ||| ||||| ||||||  |||| |||||    
T  28340878 ataagctctctaggatagcttatgaaaacagcttatagcttatatgacaacaatttgacttcatttcatct-tttattataaaaatagcatatagataag 28340976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 1417285 - 1417203
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    |||||||| |||||| ||||| | ||||||||||||  |||||||||||||||||| ||| ||||| |||||| ||||| ||||    
T  1417285 tagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatct-tttgttatataaatagtttatacataa 1417203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 5006484 - 5006635
Alignment:
Q  34 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 133  Q
    ||||||| || |||||||||||||||||    |||| |||||||||||| | ||| |  |||| | || || ||  |||||||| ||||||  |||||      
T  5006484 tttgtgaaagcttatggaaacaacttataacatgtctataagttgtttttaccttct--ccatgaactctccagggtagcttatgaaaacaatttatacc 5006581  T
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    |||||||||||| ||||||||||||||||||| ||| |||||| ||||| |||||    
T  5006582 ttatatgaaaacagtttgactttattttatct-tttgttataggaatagcttata 5006635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 28340427 - 28340498
Alignment:
Q  92 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 163  Q
    |||||||||| || |||||||||| | |||||| ||||||  ||| |||||||| |||||||||||||||||    
T  28340427 tccataagctctccagcatagcttctgaaaacaacttataacttacatgaaaacagtttgactttattttat 28340498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 29363559 - 29363484
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||| || || ||| ||||| | |||||||||||  | |||||||||| |||||||||||||||||||    
T  29363559 tttccataagctctccaggataacttatgataacagcttataactaatatgaaaacagtttgactttattttatct 29363484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 5369739 - 5369789
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatt 159  Q
    ||||||||| ||||||||||||||  ||||||||||| |||||||||||||    
T  5369739 atagcttatgaaaacagcttatagcatatatgaaaacagtttgactttatt 5369789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 10190836 - 10190766
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 160  Q
    ||||||||||||||  || |||| |||| ||||||  ||| ||||||||||||||| ||||||||||||||    
T  10190836 tttccataagcttttaagaatagtttatgaaaacaatttacagtttatatgaaaacagtttgactttattt 10190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 31002781 - 31002727
Alignment:
Q  111 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||| |||||||||||||| |||||||||||   ||||||||||||||||||    
T  31002781 agcttatcaaaacagcttatagcttatatgaaaatattttgactttattttatct 31002727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 33645939 - 33646044
Alignment:
Q  39 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag-tttat 137  Q
    ||||| ||||||||||||||||||   |||| |||||||||||| |  || |||||||||||| || || ||||||||| ||||||| |||||| || ||    
T  33645939 gagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctccag-atagcttatgaaaacagtttatagcttaat 33646037  T
Q  138 atgaaaa 144  Q
    |||||||    
T  33646038 atgaaaa 33646044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 44822024 - 44821930
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 160  Q
    ||||||||||||||||| | ||| ||| |||||| | || || ||||||||| |||||||||||||  |||||  |||||  |||||||||||||    
T  44822024 tgtcaataagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaatttgactttattt 44821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 45777229 - 45777275
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||    
T  45777229 aaaacaacttatagtttatatgaaaacagtttgacttaattttatct 45777275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 2048075 - 2048172
Alignment:
Q  94 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    |||||||||||||| |||||||||  ||| ||||||||| |||| ||||| | ||||||||||| ||||  |||||| || |||||||| ||||| ||||    
T  2048075 cataagctttctag-atagcttatgtaaaaagcttatagcttatctgaaatcagtttgactttaattta--tcttttgtaaagaaatagcttatacataa 2048171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 3500940 - 3501099
Alignment:
Q  34 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 133  Q
    |||||||||| ||||||||| ||||||||   |||  || || |||||| | ||| |||||||| ||||  ||| |||| | || || ||| |||||| |    
T  3500940 tttgtgagagcttatggaaataacttatgacatgtacatcagctgttttcagcttatttccatacgctta-taggatagttaatgaatacaacttatatt 3501038  T
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||||| | |||||||||||||||||| ||| ||||| || ||| ||||| ||||||    
T  3501039 ttatatgaaaatgatttgactttattttatct-tttattatataattagcttatacataagc 3501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 23721528 - 23721438
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctt----ttttatagaaatagattatatataagc 195  Q
    ||||||||| |||||| ||||||||||| |||||||  ||||||||||||| || || ||    |||||||||||||| ||||| ||||||    
T  23721528 atagcttataaaaacaacttatagtttaaatgaaaatagtttgactttattctaactttttttattttatagaaatagtttatacataagc 23721438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 46825120 - 46825052
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaa 178  Q
    ||||||||| ||||| | |||| | ||||||||||||  |||||||||||||||||| ||||||||||||    
T  46825120 atagcttatgaaaacggtttatggcttatatgaaaacaatttgactttattttatct-ttttttatagaa 46825052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 2727409 - 2727480
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    |||||||| ||||||  |||||||| |||||||||  ||||| ||||||||||||| ||| ||||||||||||    
T  2727409 tagcttataaaaacaatttatagttgatatgaaaagagtttgcctttattttatct-tttgttatagaaatag 2727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 12110382 - 12110326
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| |||||||||||||| |||||  |||||  ||||||||||||||||||    
T  12110382 atagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatct 12110326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 27378838 - 27378960
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 170  Q
    |||||||||||| |  || ||| |||||||| || || |||| |||| ||||||| || |||||||||||||||| |||  ||||||||||| || |||     
T  27378838 ataagttgttttcagtttattttcataagctctccaggatagtttatgaaaacagattgtagtttatatgaaaacagttctactttatttta-ct-tttg 27378935  T
Q  171 ttatagaaatagattatatataagc 195  Q
    | |||||||||| ||||| ||||||    
T  27378936 taatagaaatagcttatacataagc 27378960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 27548285 - 27548229
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| |||||||||||||| ||| ||||||||  || |||||||||||||||    
T  27548285 atagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatct 27548229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 179
Target Start/End: Complemental strand, 28165151 - 28165044
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 170  Q
    ||||| |||||| | ||| |||||||||||| || |  ||||||||| || |||| |||||| |||||| |||||  |||||||| ||||||||| |||     
T  28165151 ataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatct-tttg 28165053  T
Q  171 ttatagaaa 179  Q
    |||||||||    
T  28165052 ttatagaaa 28165044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 45813238 - 45813313
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||| ||||||| ||||||||||||   ||||||||||||||||| |||  ||||||||||| ||||| ||||||    
T  45813238 aaaacaacttatagattatatgaaaacaagttgactttattttatct-tttggtatagaaatagcttataaataagc 45813313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 46281119 - 46281211
Alignment:
Q  40 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag 132  Q
    |||||||| |||||||||||||||  |||| |||| ||||||| | ||| |||  ||||||  || || ||||||||| ||||||||||||||    
T  46281119 agagtttacggaaacaacttatgccatgtctataaattgttttcagcttatttatataagccctccagaatagcttataaaaacagcttatag 46281211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 3468727 - 3468580
Alignment:
Q  18 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 117  Q
    ||||||| ||||  |||||  |||||||  ||||||||||| |||   |||| |||||||||||  | ||| |||||| ||| | ||||| |||| ||||    
T  3468727 aacacttttgagactgtttcggagagttgttggaaacaactaatgacatgtccataagttgtttccaacttatttccacaagttctctaggatagattat 3468628  T
Q  118 taaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
     |||| ||||||||  ||||| |||||  ||||||||| |||||||||    
T  3468627 gaaaaaagcttataacttatacgaaaatagtttgacttcattttatct 3468580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 35536114 - 35536044
Alignment:
Q  124 agcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||  ||||||||||||  |||||||||||||||||| | | |||||||||||| ||||| ||||||    
T  35536114 agcttataacttatatgaaaacaatttgactttattttatct-tatgttatagaaatagcttatacataagc 35536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 40688996 - 40689106
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 170  Q
    ||||| |||||| | ||| ||| |||||| | || || ||||||||| || ||||||||||| |||||||||||   ||| |||||||||||||| |||     
T  40688996 ataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatct-tttg 40689094  T
Q  171 ttatagaaatag 182  Q
     |||||||||||    
T  40689095 ctatagaaatag 40689106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 44151485 - 44151584
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| ||||| |||||| | ||| ||||||||||||||  |  |||| |||| |||||| ||||||| ||||||| |||| |||| |||||||| |||||    
T  44151485 tgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttatatggaaacagttttactttattctatct 44151584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 193
Target Start/End: Complemental strand, 46082129 - 46081972
Alignment:
Q  38 tgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt--attaaaacagcttatagttt 135  Q
    |||||| ||||| ||||||||||||   || | |||||||||||| | ||| ||| |||||||| || || ||||| |  || |||||| ||||||  ||    
T  46082129 tgagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataactt 46082030  T
Q  136 atatgaaaacggttt-gactttattttatctcttttttatagaaatagattatatataa 193  Q
    |||||||||| |||| |||||| ||||| || ||  |||||||||||| ||||||||||    
T  46082029 atatgaaaacagttttgactttgttttaact-ttcgttatagaaatagcttatatataa 46081972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 9423576 - 9423662
Alignment:
Q  43 gtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagctta 129  Q
    |||||||||||||| |||||   |||  |||||||||||| | ||| |||| | ||||| || || |||||||||||||||||||||    
T  9423576 gtttatggaaacaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaacagctta 9423662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 33709466 - 33709384
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||| ||||||| |||||| ||||||||| |  |||||| |||||||||||| ||| ||| || ||||| ||||| ||||||    
T  33709466 cttatgaaaacagtttatagcttatatgaagatagtttgattttattttatctttttattaaagcaatagtttatacataagc 33709384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 42656498 - 42656453
Alignment:
Q  148 tttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  42656498 tttgactttattttatct-tttgttatagaaatagcttatatataag 42656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 2999181 - 2999141
Alignment:
Q  141 aaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  2999181 aaaacggtttgactttattttatct-tttgttatagaaatag 2999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 24973957 - 24973881
Alignment:
Q  118 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||| ||||||| |||||| ||||  ||||| |||||||||||| ||| |||||||||||| || || ||||||    
T  24973957 taaaacagtttatagtctatatggaaacaatttgaatttattttatct-tttgttatagaaatagcttttacataagc 24973881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 25507385 - 25507336
Alignment:
Q  95 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    ||||||||||||| ||| ||||| |||||| ||||||| |||||||||||    
T  25507385 ataagctttctagaataacttatgaaaacaacttatagcttatatgaaaa 25507336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 45593792 - 45593852
Alignment:
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||||| ||||||||||||||||| | ||| ||| |||||||| ||||| ||||||    
T  45593792 ttatatgaaaacagtttgactttattttatgt-tttgttacagaaatagcttatacataagc 45593852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 5276216 - 5276161
Alignment:
Q  139 tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||| ||||| ||||||    
T  5276216 tgaaaacggtttgactttatgttatct-tttgttataaaaatagcttatacataagc 5276161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 22759227 - 22759136
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    |||||||||||| ||  | ||||||||| ||| |||||| ||| ||||||||||||  |||  ||||||||||||| ||| ||||| ||||||    
T  22759227 tttccataagctctcctggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatct-tttgttatacaaatag 22759136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 36538021 - 36537977
Alignment:
Q  18 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatg 62  Q
    |||||||||||| ||||||| ||||  ||||||||||||||||||    
T  36538021 aacacttgtgagattgtttgagagaacttatggaaacaacttatg 36537977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 37064230 - 37064356
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagct--tattaaaacagctt-atagtttatatgaaaacggtttgactttattttatctct 167  Q
    ||||||||||||||  || ||| |||||||| ||||  ||||||  ||| |||||| ||| | |||||||||||||||  || ||||||||||| | | |    
T  37064230 ataagttgttttaagtttattttcataagctctctatgatagcttatatgaaaacaacttaagagtttatatgaaaacaattcgactttattttttgt-t 37064328  T
Q  168 tttttatagaaatagattatatataagc 195  Q
    |||||| |||||||| ||| ||||||||    
T  37064329 tttttacagaaatagtttagatataagc 37064356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 165
Target Start/End: Original strand, 44178999 - 44179027
Alignment:
Q  137 tatgaaaacggtttgactttattttatct 165  Q
    |||||||||||||||||||||||||||||    
T  44178999 tatgaaaacggtttgactttattttatct 44179027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 27675 - 27513
Alignment:
Q  32 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 131  Q
    |||||| ||||| ||||||||| | ||||||   || | |||||||||||| | ||| |||||| | |||| | |  |||| |||| |||||| ||||||    
T  27675 tgtttgggagagcttatggaaatagcttatgacatggctataagttgttttcagcttatttccacacgcttaccaagatagtttatgaaaacaacttata 27576  T
Q  132 gtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||||||||  |||||||||||||||||| | | |||||||||||  ||||| ||||||    
T  27575 gtttatatgaaaacaatttgactttattttatct-tctgttatagaaataacttatacataagc 27513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 30259465 - 30259607
Alignment:
Q  40 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt-attaaaacagcttatagtttata 138  Q
    |||| |||| ||||||||||| |   ||||||||| ||||||| | ||| |||||||||||| || |  ||||||| ||  ||||||||||||| |||||    
T  30259465 agagcttatagaaacaacttacgacatgtcaataaattgttttcaacttatttccataagctctccatgatagctttatgcaaacagcttatagcttata 30259564  T
Q  139 tgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    | ||| | ||||||||||||||||| | ||| ||||||||||||    
T  30259565 tcaaagcagtttgactttattttatat-tttgttatagaaatag 30259607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 39347972 - 39348071
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| |||||||||||| | ||| ||||||||||||||  || |||| |||| |||||| ||||||| || ||||| || |||| |||||||||||||||    
T  39347972 tgtccataagttgttttcagcttatttccataagctttgcaggatagtttatgaaaacaacttatagcttgtatgagaatggttggactttattttatct 39348071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 49517091 - 49517021
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    |||||||| |||||||||||||| ||| ||||||||  |||||||||||||||||| ||| |||||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatct-tttgttatagaaata 49517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 10199418 - 10199512
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||| | ||| ||| |||||||| ||||  ||||||||| |||| ||||||| | ||||| |||||  |||||||||||||||||||    
T  10199418 ataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgactttattttatct 10199512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 194
Target Start/End: Complemental strand, 17420294 - 17420141
Alignment:
Q  40 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 139  Q
    |||| ||||| |||||||||||    |||| |||| ||||||| | ||| ||||||| || |||||   ||||||||  ||||||| |||||| ||||||    
T  17420294 agagcttatgaaaacaacttattacatgtccataaattgttttcaacttatttccattagttttctgagatagcttacgaaaacagtttatagcttatat 17420195  T
Q  140 gaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    |||||  ||| ||||||||||||||| ||| ||||| |||||| ||||| |||||    
T  17420194 gaaaattgttcgactttattttatct-tttcttataaaaatagtttatacataag 17420141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 33527199 - 33527272
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 187  Q
    ||||| |||||||||||||| |||||||||||| |||||||| |||||||||| ||| || ||||||||| ||||    
T  33527199 cttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatct-tttgttttagaaatagcttat 33527272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 52013956 - 52013834
Alignment:
Q  73 aagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttttt 172  Q
    |||||||||| | ||| |||||||||||  ||||| ||||||||  ||||||| || ||  |||||||||||| || || |||| || ||||| || |||    
T  52013956 aagttgtttttaacttatttccataagcactctaggatagcttacgaaaacaggttttaccttatatgaaaacagtatgtctttgttatatcttttcttt 52013857  T
Q  173 atagaaatagattatatataagc 195  Q
    |||||||||| ||||| ||||||    
T  52013856 atagaaatagcttatacataagc 52013834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 7218122 - 7218202
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatata 190  Q
    |||| |||| |||||| ||||||| ||||||||||||  ||||||||||||||| || ||| |||| |||||||||||||||    
T  7218122 ataggttatgaaaacaacttatagcttatatgaaaacaatttgactttattttacct-tttattatggaaatagattatata 7218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 15361753 - 15361648
Alignment:
Q  91 ttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc-tcttttttatagaaatagattatat 189  Q
    |||||||| || || || ||| ||||| |||||||||||||| |||||||||||   |||||||||| |||||| ||||| |||||||||||| ||| |     
T  15361753 ttccataaactctcaagaatatcttatgaaaacagcttatagcttatatgaaaataatttgactttactttatcttctttgttatagaaatagtttacac 15361654  T
Q  190 ataagc 195  Q
    ||||||    
T  15361653 ataagc 15361648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 15581365 - 15581220
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 119  Q
    |||||||||| |||||||  |||| | ||||||||||||||||   |||| ||||| |||||| | | | |||| ||||||  ||||||||| ||||| |    
T  15581365 cacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttcagcctatttctataagccctctagcataccttataa 15581266  T
Q  120 aaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||| ||||||||| |||||| ||||    || ||||||||||||||    
T  15581265 aaaaagcttatagcttatataaaaatatattaactttattttatct 15581220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 8130481 - 8130409
Alignment:
Q  86 cttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttat 158  Q
    |||||||||||||| |||| |  ||||||||| |||||| ||||||| |||| ||||||| ||||||||||||    
T  8130481 cttgtttccataagttttccatgatagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttat 8130409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 48830124 - 48830180
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| ||||||| |||||| |||||||||||  |||||||||||||||||||    
T  48830124 atagcttatgaaaacagtttatagcttatatgaaaatagtttgactttattttatct 48830180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 4868510 - 4868428
Alignment:
Q  20 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagcttt 103  Q
    ||||||||||  |||||| ||||||||||| ||||||||||||   ||||||||||||||||| | ||| ||| ||||||||||    
T  4868510 cacttgtgagactgtttgagagagtttatg-aaacaacttatgacatgtcaataagttgttttcaacttatttacataagcttt 4868428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 12477292 - 12477391
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| |||||||||||| | ||| ||||||||  || || |  |||||||||||||| ||| ||||  ||| |||||||| |||||||||||||||||||    
T  12477292 tgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaaaagcatatatcttacatgaaaacagtttgactttattttatct 12477391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 15360899 - 15360845
Alignment:
Q  126 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 181  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  15360899 cttatagcttatatgaaaacagtttgactttattttatct-tttgttatagaaata 15360845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 165
Target Start/End: Complemental strand, 25479638 - 25479547
Alignment:
Q  74 agttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| | ||| ||| |||||||| ||||| ||||||||| |||||| |||||||  |||||||| ||  |||||| |||||||||||    
T  25479638 agttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaagacaatttgacgttattttatct 25479547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 33723398 - 33723508
Alignment:
Q  77 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 176  Q
    |||||| | ||| ||||||||||||||  ||  |||||||| ||||||| | |||||||||||||||||  ||||||||||| |||| |  || ||||||    
T  33723398 tgttttcagcttatttccataagctttacagggtagcttatgaaaacagttcatagtttatatgaaaacaatttgactttatgttat-tgattcttatag 33723496  T
Q  177 aaatagattata 188  Q
    |||||| |||||    
T  33723497 aaatagcttata 33723508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 21012855 - 21012757
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
    |||| ||||| |||||| | ||||||| | |||||||||||| ||| ||||| |||||| |||||||  || |||||||| | | ||||||||||||||    
T  21012855 tgtcgataagatgttttcagcttgttttcgtaagctttctaggataacttatcaaaacatcttatagcataaatgaaaacagatcgactttattttatc 21012757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 35017641 - 35017540
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac--ggtttgactttattttat 163  Q
    |||| ||||||| |||| | ||| |||||||||||| || || | ||||||| |||||||| ||||| ||||| ||||||   |||||||||||||||||    
T  35017641 tgtccataagttattttcaacttatttccataagctctccaggacagcttatgaaaacagcatatagattatacgaaaacagtgtttgactttattttat 35017542  T
Q  164 ct 165  Q
    ||    
T  35017541 ct 35017540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 44422736 - 44422666
Alignment:
Q  94 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
    |||||||| || || ||||||||| |||| ||||||||| |||||||||||| ||||||  ||||||||||    
T  44422736 cataagctctccaggatagcttataaaaatagcttatagcttatatgaaaacagtttgagattattttatc 44422666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 5941505 - 5941550
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  5941505 aaaacggctcatagtttatatgaaaacagtttgactttattttatc 5941550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 15565879 - 15565936
Alignment:
Q  108 catagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||  ||||||||||||||||||||  ||||  |||||||||||||||||||    
T  15565879 catagcttaagaaaacagcttatagtttatacaaaaatagtttgactttattttatct 15565936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 17631149 - 17631221
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    ||||||||| | ||||||| | |||||| |||||||| ||| ||||||||||||||| ||| ||||||||||||    
T  17631149 atagcttatgagaacagctcaaagtttacatgaaaacagttagactttattttatct-tttgttatagaaatag 17631221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 25006082 - 25006135
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 162  Q
    ||||||||| |||||| ||||||| ||||||||||||  |||||||||||||||    
T  25006082 atagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 27140575 - 27140478
Alignment:
Q  34 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 131  Q
    |||| ||||||||| ||||||| ||||||   |||| |||||||||||| | ||| ||| |||||||| || |  ||||||||| |||||||||||||    
T  27140575 tttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 27738211 - 27738284
Alignment:
Q  92 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||| ||  | ||||||||| ||||||  |||||| ||||||||||||  ||||||||||||||||||    
T  27738211 tccataagctctcctgtatagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatct 27738284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 6279464 - 6279364
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| |||||||||||| | | | |||||||||||| ||||| ||||||||| |||| || ||| || ||||| ||||||  ||||  ||||||||||||    
T  6279464 tgtccataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatagtttaaagcttatacgaaaacaatttgtttttattttatct 6279365  T
Q  166 c 166  Q
    |    
T  6279364 c 6279364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 17422986 - 17423070
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    ||||| ||| |||||| ||||||| |||||||||| | | ||||||||||||||||  ||| ||||||||| || ||||| ||||    
T  17422986 atagcatatgaaaacaacttatagcttatatgaaatcagcttgactttattttatcgttttgttatagaaaaagcttatacataa 17423070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 37272639 - 37272687
Alignment:
Q  114 ttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 162  Q
    |||| |||||||||||||| |||||||||||| | ||||||||||||||    
T  37272639 ttatgaaaacagcttatagcttatatgaaaacagattgactttatttta 37272687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 3319992 - 3320051
Alignment:
Q  121 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaat 180  Q
    |||| |||||||||||||||||| | |||  |||||||||||||| ||||||||| ||||    
T  3319992 aacaacttatagtttatatgaaaccagttctactttattttatcttttttttatataaat 3320051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 164
Target Start/End: Complemental strand, 4215374 - 4215339
Alignment:
Q  129 atagtttatatgaaaacggtttgactttattttatc 164  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4215374 atagtttatatgaaaacagtttgactttattttatc 4215339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 5592734 - 5592797
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttttta 173  Q
    |||||||| |||||| ||||||| |||||||| |||  || ||||||||||||||| |||||||    
T  5592734 tagcttatgaaaacaacttatagcttatatgacaacaattcgactttattttatctttttttta 5592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 6981557 - 6981431
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||||||||||| | | | ||||||||| || || || ||||||||  ||| ||||||||| ||||||| |||    ||||||||| |||||| |    
T  6981557 tgtcaataagttgttttcagcatatttccataaactctccagaatagcttaggaaatcagcttataatttatatcaaacaaatttgactttgttttat-t 6981459  T
Q  166 cttttttatagaaatagattatatataa 193  Q
     ||| |||||||||||  ||||||||||    
T  6981458 ttttgttatagaaataatttatatataa 6981431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 10581125 - 10581180
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 164  Q
    ||||||||| |||||| ||||||| ||| |||||||  ||||||||||||||||||    
T  10581125 atagcttatgaaaacaacttatagcttaaatgaaaaaagtttgactttattttatc 10581180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 161
Target Start/End: Complemental strand, 17269307 - 17269220
Alignment:
Q  74 agttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 161  Q
    ||||||||| | ||| || || |||||| || || ||||||||| |||||| ||||| | ||||||||||||  ||||||||||||||    
T  17269307 agttgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttatttt 17269220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 17628611 - 17628549
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    ||||||||||||| |||||||||||||  |||||||||| ||||||| |||  |||||||||||    
T  17628611 aaaacagcttataatttatatgaaaacaatttgactttactttatct-tttaatatagaaatag 17628549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 19462814 - 19462865
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 160  Q
    ||||||||| ||||||  ||| ||||||||||||||| ||||||||||||||    
T  19462814 atagcttatgaaaacaatttacagtttatatgaaaactgtttgactttattt 19462865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 195
Target Start/End: Original strand, 23544687 - 23544773
Alignment:
Q  109 atagcttattaaaacagctta-tagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||| ||||||| ||| ||| ||||||||||||  |||||||| ||||||||| ||||  |||||||||| ||||| ||||||    
T  23544687 atagcttatgaaaacagtttaatagcttatatgaaaacaatttgacttaattttatct-ttttccatagaaatagcttatacataagc 23544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 28467337 - 28467411
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||| ||||||| |||||| |||||||| |||||| ||| ||| |||||||||||   ||||||||||||||||||    
T  28467337 tttcaataagctctctagc-tagcttatgaaaacaacttgtagcttatatgaaaataatttgactttattttatct 28467411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 30257743 - 30257644
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 170  Q
    ||||| |||||| | ||| |||| ||||||  || || |||| |||| |||||| |||| || ||||||| |||| ||||||||||||||||||| ||||    
T  30257743 ataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgactttattttatctttttt 30257644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 165
Target Start/End: Original strand, 34179881 - 34179976
Alignment:
Q  70 aataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||||||| | | | ||||||||| ||||  || |||| |||| ||||||| |||||| ||| || |||||  ||||||||||||||||||    
T  34179881 aataagttgttttcagcgtatttccataaacttttcaggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatct 34179976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 195
Target Start/End: Original strand, 4363680 - 4363764
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||| |||| || |||||| |||||||||||| ||||||| |||||| |||| ||| ||||| ||||||| |||| ||||||    
T  4363680 atagcttatgaaaataggttatagcttatatgaaaacagtttgacattatttaatct-tttgttata-aaatagagtatacataagc 4363764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 5756735 - 5756812
Alignment:
Q  110 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    |||||||  |||||| |||||| ||||||||||||| |||| ||||||| | |||| ||| |||||||||||| |||||    
T  5756735 tagcttacgaaaacaacttataatttatatgaaaacagtttaactttatatcatct-tttgttatagaaatagcttata 5756812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 165
Target Start/End: Complemental strand, 15515633 - 15515507
Alignment:
Q  39 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 138  Q
    ||||||||||| ||||||||||||   |||||||| | | |||| |  || |||||||||||| || |  ||| ||||| |||||| ||||||| |||||    
T  15515633 gagagtttatgaaaacaacttatgacatgtcaatacgctattttcaatttatttccataagctatccatgataacttatgaaaacaacttatagcttata 15515534  T
Q  139 tgaaaacggtttgactttattttatct 165  Q
     ||||||  ||||| |||||| |||||    
T  15515533 cgaaaacattttgattttattctatct 15515507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 16322909 - 16322815
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    |||||||||||| | ||| |||||||||||| |  |  ||||| ||| |||||||||||||  || ||||||||  |||||||| ||||||||||    
T  16322909 ataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttataacttctatgaaaatagtttgactatattttatct 16322815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 25005815 - 25005881
Alignment:
Q  79 ttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 145  Q
    |||||| |||||||  ||||||| || || ||||||||| |||||| ||||||| ||||||||||||    
T  25005815 ttttaagcttgtttttataagctctccaggatagcttatgaaaacaacttatagcttatatgaaaac 25005881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 28689440 - 28689580
Alignment:
Q  49 ggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagct--tattaaaacagcttatagtttatatgaaaacg 146  Q
    ||||||| ||||||   |||| |||||||||||| | ||| ||| ||||||||||| |  ||||||  ||| |||||| ||||||| ||||||||||||     
T  28689440 ggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaacc 28689539  T
Q  147 gtttgactttattttatctcttttttatagaaatagattata 188  Q
      |||  |||||||||||| |||  ||||||||||| |||||    
T  28689540 acttgcatttattttatct-tttgatatagaaatagtttata 28689580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 29415642 - 29415684
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactt 155  Q
    ||||| |||||||||||||||||| || |||||||||||||||    
T  29415642 cttatgaaaacagcttatagtttacataaaaacggtttgactt 29415684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 781192 - 781253
Alignment:
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||||||| |||| ||||||||||| || ||| ||||||||||   ||||||||||||    
T  781192 ttatatgaaaacagtttcactttattttacctttttattatagaaattatttatatataagc 781253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 3924710 - 3924574
Alignment:
Q  45 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    ||||| |||||| ||||| | |||  ||||||||||||   ||| ||||||||| || |  || ||||||||| |||||| || |||| ||||| |||||    
T  3924710 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaactaatagattatacgaaaa 3924611  T
Q  145 cggtttgactttattttatctcttttttatagaaatag 182  Q
    | ||||| ||| ||||||||| | | ||||||||||||    
T  3924610 cagtttgccttgattttatct-tgtgttatagaaatag 3924574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 4548743 - 4548670
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 182  Q
    ||||||||| ||||||||||||   || ||| ||||| ||||||||||||||||||| ||| ||| | ||||||    
T  4548743 atagcttatgaaaacagcttatgacttgtataaaaacagtttgactttattttatctttttgttacaaaaatag 4548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 6659579 - 6659502
Alignment:
Q  66 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 143  Q
    |||| |||||||||||| | ||| |||| ||||||| ||| |  |||||||| |||||| ||||||| ||||||||||    
T  6659579 tgtccataagttgttttcagcttatttcgataagctctcttggttagcttatgaaaacatcttatagcttatatgaaa 6659502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 12564505 - 12564616
Alignment:
Q  67 gtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc 166  Q
    |||||||||||||||| | ||| |||||||||| | || |  ||||||||| |||||| | ||||  || |||| ||||||||||||||||  ||||||     
T  12564505 gtcaataagttgttttcagcttatttccataagttctccaagatagcttatgaaaacaacctataccttgtatg-aaacggtttgactttaggttatct- 12564602  T
Q  167 ttttttatagaaat 180  Q
    ||| ||||||||||    
T  12564603 tttgttatagaaat 12564616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 23902077 - 23902150
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 144  Q
    |||||||||||| | |||  ||||||||||| ||||  ||||||| | |||||| ||||||| |||||||||||    
T  23902077 ataagttgttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttatatgaaaa 23902150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 45999354 - 45999414
Alignment:
Q  127 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 188  Q
    |||||| |||||||||| | |||||||||||| |||||| ||| |||||||||||| |||||    
T  45999354 ttatagcttatatgaaagcagtttgactttatcttatct-tttgttatagaaatagcttata 45999414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 47877129 - 47877088
Alignment:
Q  124 agcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  47877129 agcttatagtttatatgaaaacaatttgattttattttatct 47877088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 51929804 - 51929845
Alignment:
Q  90 tttccataagctttctagcatagcttattaaaacagcttata 131  Q
    |||||||||||| ||||| ||||||||| |||||||||||||    
T  51929804 tttccataagctctctagaatagcttatgaaaacagcttata 51929845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 10586420 - 10586476
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| ||||  |||||||||| ||||||||||  ||| ||||||||||||||    
T  10586420 atagcttatgaaaatggcttatagttcatatgaaaacaattttactttattttatct 10586476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 21516391 - 21516312
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 193  Q
    ||||| |||| | ||| ||||||||||||||||  |||||||| ||||||||| ||| ||||| |||||| ||||| ||||    
T  21516391 cttatgaaaataacttctagtttatatgaaaactatttgacttcattttatct-tttcttataaaaatagtttataaataa 21516312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 28788605 - 28788641
Alignment:
Q  128 tatagtttatatgaaaacggtttgactttattttatc 164  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  28788605 tatagcttatatgaaaacagtttgactttattttatc 28788641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 29666367 - 29666437
Alignment:
Q  119 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatat 191  Q
    |||||||||||||||||||||||||||  | | |||||||||||||| ||| |||| |||||||  |||||||    
T  29666367 aaaacagcttatagtttatatgaaaacaatat-actttattttatct-tttgttattgaaatagcgtatatat 29666437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 30371166 - 30371114
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||| |||||| ||||||| ||||||||||||  ||||| ||||||||||||    
T  30371166 cttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttatct 30371114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 35080143 - 35080202
Alignment:
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 194  Q
    ||||||| |||| ||||||||||||||||| | ||| |||||||||| | |||||||||||    
T  35080143 ttatatggaaacagtttgactttattttat-tttttgttatagaaattgcttatatataag 35080202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 45205090 - 45205034
Alignment:
Q  109 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 165  Q
    ||||||||| |||||| ||| ||| ||||||| |||  |||||||||||||||||||    
T  45205090 atagcttatgaaaacaacttctagcttatatggaaatagtttgactttattttatct 45205034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 48282118 - 48282070
Alignment:
Q  147 gtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||||||||||||||||| | |||||||||||||| || || ||||||    
T  48282118 gtttgactttattttatctttcttttatagaaatagcttttacataagc 48282070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 20197 - 20116
Alignment:
Q  113 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    ||||| |||||| || |||| |||||||| ||| ||||||||||||||||||| ||  ||||||||||||  |||| ||||||    
T  20197 cttatgaaaacaactaatagcttatatgataactgtttgactttattttatct-ttggttatagaaatagtatatacataagc 20116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 1147 - 1207
Alignment:
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||| ||  ||||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  1147 ttatatgagaatagtttgactttattttatct-tttgttatagaaatagcttatacataagc 1207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 2828 - 2768
Alignment:
Q  134 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 195  Q
    |||||||| ||  ||||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  2828 ttatatgagaatagtttgactttattttatct-tttgttatagaaatagcttatacataagc 2768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 12678 - 12775
Alignment:
Q  35 ttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatt-aaaacagcttata 131  Q
    ||||||||  ||||||||||||||||||   |||| |||||||||||| | |||   |||||||||| ||||  ||||||| || |||||||||||||    
T  12678 ttgtgagaccttatggaaacaacttatgacatgtccataagttgttttcagcttagctccataagctctctaagatagcttcttgaaaacagcttata 12775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0584 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0584
Description:

Target: scaffold0584; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 1343 - 1414
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 143  Q
    |||||||||||| ||||| ||| ||||||| ||| || ||||||  |||||| ||||||||| ||||||||||    
T  1343 ataagttgtttttatcttattttcataagc-ttccaggatagctagttaaaatagcttatagcttatatgaaa 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0446 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 5469 - 5540
Alignment:
Q  71 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 143  Q
    |||||||||||| ||||| ||| ||||||| ||| || ||||||  |||||| ||||||||| ||||||||||    
T  5469 ataagttgtttttatcttattttcataagc-ttccaggatagctagttaaaatagcttatagcttatatgaaa 5540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University