View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7261_low_1 (Length: 509)
Name: NF7261_low_1
Description: NF7261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7261_low_1 |
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Alignment Details
Target: chr5 (Bit Score: 444; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 57 - 500
Target Start/End: Complemental strand, 14002598 - 14002155
Alignment:
| Q |
57 |
ttataattgagtgaagctagaatttcatttcacctttggtgtaaattccatgatgatccatgttatttcaatgaaagatataattatatttggtgcaact |
156 |
Q |
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| T |
14002598 |
ttataattgagtgaagctagaatttcatttcacctttggtgtaaattccatgatgatccatgttatttcaatgaaagatataattatatttggtgcaact |
14002499 |
T |
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| Q |
157 |
ttgaaatatatgcataatttatatactagcaatgtgatttggacatggtgagatgggacctgtgtgacactacgtaaggaataggacacaacataaggtg |
256 |
Q |
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| T |
14002498 |
ttgaaatatatgcataatttatatactagcaatgtgatttggacatggtgagatgggacctgtgtgacactacgtaaggaataggacacaacataaggtg |
14002399 |
T |
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| Q |
257 |
cttagagaaaatgtgacagtaagagatgtttcagttagatcctacaaaattagacatcaaatagctcatactggattagcatagatttcactttgcatag |
356 |
Q |
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| T |
14002398 |
cttagagaaaatgtgacagtaagagatgtttcagttagatcctacaaaattagacatcaaatagctcatactggattagcatagatttcactttgcatag |
14002299 |
T |
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| Q |
357 |
atgatattatgataacgaggagacacaattaattttccaaaattaattgaaaattctgctttacgtggaagaaataaggctggttgggttgcacttaaag |
456 |
Q |
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| T |
14002298 |
atgatattatgataacgaggagacacaattaattttccaaaattaattgaaaattctgctttacgtggaagaaataaggctggttgggttgcacttaaag |
14002199 |
T |
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| Q |
457 |
cacaatcaatcaataacagggtagaatctgcacatgtttgatgt |
500 |
Q |
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| T |
14002198 |
cacaatcaatcaataacagggtagaatctgcacatgtttgatgt |
14002155 |
T |
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