View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7262_low_1 (Length: 253)
Name: NF7262_low_1
Description: NF7262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7262_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 15 - 248
Target Start/End: Original strand, 42139294 - 42139526
Alignment:
| Q |
15 |
ctgtgccactggatgtcatattcatattcacacaagaaaacatcatctccctcattgctagctttggcatactccttagggatcatgacatagcaatgtc |
114 |
Q |
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| T |
42139294 |
ctgtgccactggatgtcatattcatattcacacaagaaaacatcatctccctcattgctagctttggcatactccttagggatcatgacatagcaatgtc |
42139393 |
T |
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| Q |
115 |
gaaggacagattccatctatattgaacagagaagcaccataatgagnnnnnnnggagaatgagttctgattaccctgaacattaaaaaacgagactatag |
214 |
Q |
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| T |
42139394 |
gaaggacagattccatctatattgaacagagaagcaccataatgag-aaaaaaggagaatgagttctgattaccctgaacattaaaaaacgagactatag |
42139492 |
T |
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| Q |
215 |
aaatacaaataatacagcaccacaggttctgctc |
248 |
Q |
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|||||||||||||||||||||||| ||| ||||| |
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| T |
42139493 |
aaatacaaataatacagcaccacaagttatgctc |
42139526 |
T |
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