View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7263_low_5 (Length: 415)
Name: NF7263_low_5
Description: NF7263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7263_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 17 - 344
Target Start/End: Complemental strand, 18013747 - 18013416
Alignment:
| Q |
17 |
agatttaagtttctttaaatataaaatataaatagatacattgttttcttttttaagctgaattttacaccacttatttatttgtcacgtgttagaataa |
116 |
Q |
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| T |
18013747 |
agatttaagtttctttaaatataaaatataaatagatacattgttttcttttttaagctgaattttacaccacttatttatttgtcacgtgttagaataa |
18013648 |
T |
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| Q |
117 |
tgaaactaacattttatttttgtacaaattttatgacactttcaatttcactaccaaaacatattcatc--tatacacaagcccaatttttcggttttcg |
214 |
Q |
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| T |
18013647 |
tgaaactaacattttatttttgtacaaattttatgacactttcaatttcactaccaaaacatattcatctatatacacaagcccaatttttcggttttcg |
18013548 |
T |
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| Q |
215 |
ttaaagctccgtaaaggt--aatgttattattctatgatcatagatatttagatatctaagttgctaacacaaatttaacagatatgttaatgcatatga |
312 |
Q |
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| T |
18013547 |
ttaaagctccgtaaaggtaaaattttattattctatgatcatagatatttagatatctaacttgctaacaaaaattgaacagatatgttaatgcatatga |
18013448 |
T |
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| Q |
313 |
tacagagattcttatgtatgttgatgatatag |
344 |
Q |
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| T |
18013447 |
tacagagattcttatgtatgttgatgatatag |
18013416 |
T |
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