View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7264_high_8 (Length: 274)
Name: NF7264_high_8
Description: NF7264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7264_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 20 - 261
Target Start/End: Original strand, 7410027 - 7410267
Alignment:
| Q |
20 |
atgagagtttgtttcaatacaatccatactttgaaagtcgtgaaaatattgttagtaaacatataactcaaattaaggataaagtgaaacaaagtctttt |
119 |
Q |
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| T |
7410027 |
atgagagtttgtttcaatacaatccatactttgaaagtcgtgaaaatattgttagtaaacatataactcaaattaaggataaagtgaaacaaagtctttt |
7410126 |
T |
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| Q |
120 |
ttctaaaagaagaaccaagatttccacaaaagaaaatgtctcccaatttgtaattgtacactgaaatccagcataaaaggccactaatgctaccttaaaa |
219 |
Q |
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| T |
7410127 |
-tctaaaagaagaaccaagatttccacaaaagaaaatgtctcccaatttgtaattctacactgaaatccagcataaaaggccactaatgctaccttaaaa |
7410225 |
T |
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| Q |
220 |
agtgattctaccacttacctccttatctagatctctctcttc |
261 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||| |
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| T |
7410226 |
agtgattccaccacttacctccttatctagatctctctcttc |
7410267 |
T |
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