View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7272_low_4 (Length: 294)
Name: NF7272_low_4
Description: NF7272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7272_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 17 - 276
Target Start/End: Complemental strand, 31455454 - 31455195
Alignment:
| Q |
17 |
atgaatagtaaaagagaacgaaatatagatattgtgatggtggtagcttctcttaaaaccttagccaaaaatattaaattttgatcttgtcccataatag |
116 |
Q |
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| T |
31455454 |
atgaatagtaaaagagaacgaaatatagatattgtgatggtggtagcttctcttaaaaccttagccaaaaatattaaattttgatcttggcccataatag |
31455355 |
T |
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| Q |
117 |
aaaaaagctttactttgttttccattttcttcatttcactaagttgcttagaaatttccttctttgccttctttctaaagcaatcatactcatatatgct |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31455354 |
aaaaaagctttactttgttttccattttcttcatttcaccaagttgctttgaaatttccttctttgccttctttctaaagcaatcatactcatatatgct |
31455255 |
T |
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| Q |
217 |
gctttcaatgcttgaagttgaatttcctcgtcttctacgtatagcggattgaagtgtttc |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
31455254 |
gctttcaatgcttgaagttgaatttcctcgtcttctacgtatagccgattgaagtgtttc |
31455195 |
T |
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