View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7280_high_1 (Length: 537)

Name: NF7280_high_1
Description: NF7280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7280_high_1
NF7280_high_1
[»] chr6 (41 HSPs)
chr6 (197-528)||(26661290-26661621)
chr6 (197-528)||(26767261-26767592)
chr6 (27-397)||(3809034-3809402)
chr6 (27-397)||(21593138-21593508)
chr6 (18-201)||(26800438-26800621)
chr6 (26-285)||(17762571-17762832)
chr6 (27-217)||(2973265-2973456)
chr6 (27-297)||(26830450-26830721)
chr6 (26-219)||(5043278-5043470)
chr6 (27-231)||(22425151-22425356)
chr6 (52-294)||(25072759-25073001)
chr6 (31-170)||(603410-603550)
chr6 (268-397)||(22964080-22964209)
chr6 (268-397)||(23824184-23824313)
chr6 (26-161)||(17757789-17757927)
chr6 (268-389)||(24435566-24435687)
chr6 (268-397)||(31979899-31980028)
chr6 (268-389)||(18234465-18234587)
chr6 (304-397)||(603622-603715)
chr6 (308-397)||(9183399-9183488)
chr6 (272-409)||(26954656-26954792)
chr6 (268-391)||(10076783-10076906)
chr6 (268-346)||(31086110-31086189)
chr6 (268-346)||(5017133-5017211)
chr6 (304-397)||(5571850-5571943)
chr6 (330-397)||(17759427-17759494)
chr6 (268-393)||(33211534-33211658)
chr6 (270-346)||(16452679-16452756)
chr6 (270-346)||(16452790-16452867)
chr6 (268-397)||(21272575-21272704)
chr6 (270-375)||(5406548-5406655)
chr6 (270-375)||(5410873-5410980)
chr6 (268-375)||(30834884-30834994)
chr6 (270-397)||(5411583-5411712)
chr6 (283-375)||(5413812-5413905)
chr6 (270-345)||(31405024-31405100)
chr6 (215-285)||(603553-603623)
chr6 (308-397)||(5407297-5407387)
chr6 (268-386)||(24714754-24714872)
chr6 (268-375)||(33160702-33160811)
chr6 (434-478)||(21593058-21593102)
[»] chr8 (40 HSPs)
chr8 (26-397)||(42435316-42435687)
chr8 (22-397)||(22976006-22976380)
chr8 (84-375)||(4283040-4283330)
chr8 (26-396)||(11383479-11383829)
chr8 (26-397)||(40221236-40221588)
chr8 (27-231)||(44353433-44353634)
chr8 (22-217)||(2999841-3000037)
chr8 (26-173)||(40328474-40328622)
chr8 (268-397)||(30143032-30143161)
chr8 (99-230)||(20686456-20686586)
chr8 (268-397)||(4731348-4731477)
chr8 (271-397)||(15212476-15212602)
chr8 (268-397)||(43036113-43036242)
chr8 (290-397)||(27810988-27811095)
chr8 (90-237)||(40585356-40585503)
chr8 (268-397)||(12702987-12703117)
chr8 (290-397)||(4733515-4733622)
chr8 (268-397)||(5702065-5702195)
chr8 (268-397)||(1345718-1345848)
chr8 (268-397)||(1746566-1746697)
chr8 (270-397)||(34256854-34256983)
chr8 (274-397)||(4743548-4743672)
chr8 (270-397)||(19175318-19175445)
chr8 (268-344)||(33351893-33351969)
chr8 (270-395)||(34254678-34254805)
chr8 (36-204)||(3846153-3846321)
chr8 (66-211)||(40535510-40535652)
chr8 (27-213)||(11136796-11136983)
chr8 (151-207)||(3817784-3817840)
chr8 (268-348)||(23799211-23799291)
chr8 (433-479)||(4731267-4731313)
chr8 (65-210)||(9633902-9634045)
chr8 (84-158)||(10020150-10020224)
chr8 (316-397)||(42497904-42497986)
chr8 (304-348)||(4696263-4696307)
chr8 (289-397)||(10014849-10014957)
chr8 (268-396)||(31217947-31218077)
chr8 (268-375)||(17982364-17982473)
chr8 (84-153)||(10101543-10101612)
chr8 (268-375)||(19948669-19948778)
[»] scaffold0286 (1 HSPs)
scaffold0286 (27-397)||(11030-11400)
[»] chr4 (74 HSPs)
chr4 (27-397)||(6655428-6655798)
chr4 (26-397)||(40630456-40630827)
chr4 (27-397)||(26363737-26364107)
chr4 (26-391)||(50674171-50674536)
chr4 (26-397)||(27417276-27417647)
chr4 (26-397)||(54882512-54882863)
chr4 (26-387)||(50263023-50263383)
chr4 (27-397)||(2209192-2209550)
chr4 (26-230)||(8665046-8665250)
chr4 (27-282)||(55085691-55085946)
chr4 (27-219)||(379028-379221)
chr4 (26-241)||(41964044-41964258)
chr4 (27-230)||(33989501-33989704)
chr4 (26-285)||(46569871-46570130)
chr4 (26-218)||(46703152-46703343)
chr4 (26-220)||(12073042-12073235)
chr4 (83-230)||(8653239-8653385)
chr4 (28-217)||(35662094-35662283)
chr4 (77-230)||(10071524-10071676)
chr4 (86-231)||(22883138-22883283)
chr4 (86-231)||(22934802-22934947)
chr4 (268-397)||(34570763-34570892)
chr4 (22-212)||(38811400-38811590)
chr4 (86-222)||(35370722-35370859)
chr4 (26-145)||(8647861-8647981)
chr4 (67-237)||(3785722-3785891)
chr4 (275-397)||(9927817-9927939)
chr4 (219-397)||(41639037-41639215)
chr4 (74-171)||(10071968-10072065)
chr4 (268-393)||(37740320-37740445)
chr4 (68-231)||(26699814-26699978)
chr4 (268-397)||(36314816-36314945)
chr4 (268-397)||(36329025-36329154)
chr4 (86-237)||(35369824-35369971)
chr4 (27-186)||(33089582-33089741)
chr4 (84-222)||(47514885-47515023)
chr4 (268-397)||(5429370-5429499)
chr4 (268-375)||(54200255-54200362)
chr4 (268-397)||(8689082-8689211)
chr4 (88-237)||(25723604-25723752)
chr4 (268-397)||(25861618-25861748)
chr4 (269-397)||(5268785-5268914)
chr4 (268-397)||(54867561-54867690)
chr4 (269-397)||(5143644-5143772)
chr4 (268-397)||(6743001-6743130)
chr4 (290-397)||(12745787-12745895)
chr4 (268-346)||(16622931-16623008)
chr4 (323-397)||(35661911-35661985)
chr4 (383-472)||(8653111-8653200)
chr4 (383-472)||(8664918-8665007)
chr4 (116-216)||(32091222-32091323)
chr4 (370-445)||(10071403-10071477)
chr4 (272-397)||(5148064-5148189)
chr4 (268-346)||(16628510-16628587)
chr4 (316-397)||(52095757-52095839)
chr4 (308-397)||(46570133-46570222)
chr4 (268-375)||(29254206-29254313)
chr4 (282-397)||(36994250-36994365)
chr4 (323-397)||(26176028-26176102)
chr4 (102-211)||(22629290-22629399)
chr4 (24-165)||(41961110-41961252)
chr4 (323-397)||(56179028-56179103)
chr4 (268-402)||(3909782-3909915)
chr4 (84-165)||(6719289-6719370)
chr4 (27-166)||(34112314-34112454)
chr4 (304-397)||(3777966-3778060)
chr4 (270-346)||(52083007-52083084)
chr4 (270-346)||(52094014-52094091)
chr4 (323-397)||(5370479-5370554)
chr4 (304-347)||(5396327-5396370)
chr4 (309-396)||(24968801-24968888)
chr4 (434-479)||(26363656-26363701)
chr4 (323-394)||(12739942-12740014)
chr4 (323-394)||(12748148-12748220)
[»] scaffold0466 (1 HSPs)
scaffold0466 (26-348)||(6848-7171)
[»] chr3 (68 HSPs)
chr3 (26-397)||(54593176-54593548)
chr3 (27-397)||(36018334-36018693)
chr3 (27-397)||(43404059-43404429)
chr3 (26-397)||(4569423-4569794)
chr3 (30-397)||(43402119-43402486)
chr3 (27-396)||(6095925-6096295)
chr3 (30-397)||(55302294-55302660)
chr3 (27-397)||(40912809-40913181)
chr3 (26-397)||(49199796-49200147)
chr3 (18-238)||(28074248-28074467)
chr3 (27-219)||(46860120-46860313)
chr3 (27-397)||(34490704-34491055)
chr3 (28-230)||(47303891-47304093)
chr3 (27-297)||(30235696-30235967)
chr3 (30-220)||(41819851-41820040)
chr3 (160-397)||(31340501-31340739)
chr3 (26-231)||(5434202-5434409)
chr3 (84-230)||(26323896-26324042)
chr3 (86-282)||(34795456-34795652)
chr3 (268-397)||(29812753-29812882)
chr3 (268-397)||(5236806-5236935)
chr3 (39-231)||(39127197-39127389)
chr3 (268-397)||(40592357-40592486)
chr3 (268-397)||(29810558-29810687)
chr3 (363-472)||(30235616-30235724)
chr3 (121-237)||(35139134-35139250)
chr3 (268-397)||(8127012-8127141)
chr3 (304-397)||(44331259-44331352)
chr3 (268-392)||(1735884-1736008)
chr3 (268-359)||(24694779-24694870)
chr3 (268-397)||(8370064-8370193)
chr3 (284-397)||(46173206-46173318)
chr3 (270-389)||(40845037-40845157)
chr3 (269-397)||(48438598-48438727)
chr3 (268-397)||(16264731-16264860)
chr3 (268-397)||(36029475-36029605)
chr3 (121-211)||(36796064-36796154)
chr3 (268-397)||(39032130-39032259)
chr3 (268-346)||(47923530-47923608)
chr3 (270-397)||(7761954-7762082)
chr3 (268-397)||(44331796-44331925)
chr3 (268-346)||(30709423-30709501)
chr3 (270-397)||(7764141-7764270)
chr3 (268-397)||(5258492-5258623)
chr3 (268-397)||(9636476-9636607)
chr3 (268-397)||(27027088-27027218)
chr3 (72-127)||(31340448-31340503)
chr3 (268-397)||(40735117-40735248)
chr3 (385-472)||(47303763-47303850)
chr3 (270-348)||(23410681-23410759)
chr3 (304-392)||(27038459-27038548)
chr3 (32-171)||(1683185-1683325)
chr3 (288-397)||(21711603-21711713)
chr3 (268-346)||(40734239-40734317)
chr3 (270-397)||(45094853-45094982)
chr3 (310-397)||(16498756-16498840)
chr3 (268-345)||(25929023-25929100)
chr3 (434-479)||(31340775-31340820)
chr3 (87-158)||(50432937-50433006)
chr3 (433-479)||(34490623-34490669)
chr3 (269-347)||(37726058-37726135)
chr3 (433-479)||(44331177-44331223)
chr3 (268-314)||(51398587-51398633)
chr3 (352-397)||(3393296-3393341)
chr3 (310-347)||(37408199-37408236)
chr3 (323-396)||(51398517-51398590)
chr3 (310-346)||(27974579-27974615)
chr3 (304-348)||(35925908-35925952)
[»] scaffold0014 (1 HSPs)
scaffold0014 (26-397)||(80608-80979)
[»] chr1 (55 HSPs)
chr1 (27-397)||(37033399-37033765)
chr1 (26-367)||(13547414-13547754)
chr1 (26-367)||(13549325-13549665)
chr1 (26-395)||(193086-193454)
chr1 (28-375)||(29135762-29136088)
chr1 (26-397)||(37879236-37879587)
chr1 (26-238)||(47255664-47255871)
chr1 (27-216)||(28242041-28242230)
chr1 (26-221)||(7482555-7482751)
chr1 (26-238)||(19754122-19754334)
chr1 (27-231)||(42298301-42298505)
chr1 (27-285)||(11348283-11348540)
chr1 (34-241)||(34603204-34603411)
chr1 (26-218)||(37167948-37168140)
chr1 (34-241)||(34602672-34602879)
chr1 (28-297)||(19752258-19752526)
chr1 (26-216)||(47114825-47115014)
chr1 (88-231)||(6808084-6808228)
chr1 (26-237)||(41135452-41135664)
chr1 (39-217)||(9109739-9109918)
chr1 (268-397)||(44454849-44454978)
chr1 (100-297)||(31928208-31928397)
chr1 (268-397)||(31658928-31659057)
chr1 (268-397)||(28220575-28220705)
chr1 (268-397)||(49918039-49918168)
chr1 (268-375)||(30476797-30476904)
chr1 (268-389)||(13598782-13598904)
chr1 (268-397)||(28223770-28223900)
chr1 (268-396)||(1833212-1833341)
chr1 (268-397)||(10924913-10925042)
chr1 (383-483)||(42298542-42298642)
chr1 (268-397)||(4552997-4553126)
chr1 (94-216)||(22078995-22079109)
chr1 (318-402)||(3156552-3156636)
chr1 (276-397)||(37070157-37070279)
chr1 (304-397)||(11348191-11348284)
chr1 (66-171)||(16216860-16216964)
chr1 (270-397)||(3206675-3206805)
chr1 (268-397)||(3282089-3282218)
chr1 (268-346)||(29652195-29652273)
chr1 (268-348)||(21536206-21536285)
chr1 (36-165)||(28318094-28318225)
chr1 (84-157)||(3331255-3331328)
chr1 (40-199)||(6068287-6068447)
chr1 (270-397)||(20762361-20762490)
chr1 (30-93)||(31926035-31926099)
chr1 (308-397)||(3189040-3189131)
chr1 (308-397)||(3197857-3197948)
chr1 (269-347)||(13604259-13604336)
chr1 (268-375)||(13316666-13316775)
chr1 (310-397)||(13659694-13659778)
chr1 (270-346)||(15820048-15820124)
chr1 (308-396)||(22819852-22819940)
chr1 (269-348)||(16455385-16455464)
chr1 (315-348)||(16124295-16124328)
[»] chr5 (41 HSPs)
chr5 (26-375)||(27015026-27015375)
chr5 (27-339)||(38746535-38746847)
chr5 (27-397)||(5057521-5057889)
chr5 (26-285)||(40146843-40147104)
chr5 (26-238)||(213099-213312)
chr5 (22-221)||(28277963-28278163)
chr5 (31-238)||(16642208-16642414)
chr5 (26-218)||(27637941-27638131)
chr5 (39-215)||(316419-316596)
chr5 (55-232)||(35615808-35615985)
chr5 (28-237)||(30792872-30793080)
chr5 (28-231)||(30802579-30802782)
chr5 (66-231)||(14689774-14689938)
chr5 (22-231)||(10055027-10055237)
chr5 (268-397)||(42426584-42426713)
chr5 (27-219)||(4160284-4160475)
chr5 (268-397)||(13487895-13488022)
chr5 (268-397)||(32636513-32636643)
chr5 (268-375)||(19806118-19806225)
chr5 (268-395)||(16650971-16651098)
chr5 (55-163)||(33906383-33906491)
chr5 (268-397)||(11916557-11916687)
chr5 (290-375)||(535615-535700)
chr5 (304-375)||(39468917-39468988)
chr5 (268-397)||(13239442-13239572)
chr5 (268-389)||(14520612-14520733)
chr5 (269-397)||(31004739-31004868)
chr5 (316-397)||(40146739-40146820)
chr5 (268-348)||(12083813-12083892)
chr5 (323-397)||(42428822-42428896)
chr5 (147-220)||(33906578-33906650)
chr5 (328-397)||(38746460-38746529)
chr5 (268-340)||(16649972-16650044)
chr5 (323-397)||(30683312-30683386)
chr5 (308-397)||(37438835-37438925)
chr5 (270-375)||(25412473-25412580)
chr5 (268-314)||(533542-533588)
chr5 (268-375)||(13342772-13342881)
chr5 (268-346)||(30182329-30182409)
chr5 (269-347)||(9352971-9353048)
chr5 (310-347)||(36931986-36932023)
[»] chr7 (56 HSPs)
chr7 (27-396)||(6360238-6360607)
chr7 (55-397)||(32358191-32358532)
chr7 (26-238)||(34311041-34311254)
chr7 (18-238)||(22269605-22269824)
chr7 (26-314)||(29608296-29608579)
chr7 (26-217)||(3258647-3258839)
chr7 (26-238)||(6431602-6431814)
chr7 (27-297)||(4512716-4512985)
chr7 (26-300)||(48599659-48599923)
chr7 (26-285)||(2361296-2361555)
chr7 (26-217)||(2389934-2390125)
chr7 (27-241)||(4509032-4509237)
chr7 (27-241)||(4510874-4511079)
chr7 (27-231)||(22328724-22328930)
chr7 (128-291)||(30814343-30814505)
chr7 (50-213)||(5116290-5116453)
chr7 (268-397)||(47674292-47674421)
chr7 (268-397)||(47676485-47676614)
chr7 (268-397)||(27347614-27347742)
chr7 (268-397)||(2647283-2647412)
chr7 (268-397)||(14070182-14070312)
chr7 (268-397)||(14380210-14380340)
chr7 (268-397)||(4585851-4585980)
chr7 (268-392)||(18126339-18126463)
chr7 (268-396)||(26417004-26417132)
chr7 (268-375)||(2761651-2761758)
chr7 (268-397)||(48489120-48489249)
chr7 (268-397)||(4538900-4539029)
chr7 (290-397)||(2389764-2389871)
chr7 (268-375)||(48491290-48491397)
chr7 (268-348)||(21983625-21983704)
chr7 (268-392)||(33332041-33332165)
chr7 (268-407)||(496343-496481)
chr7 (268-397)||(23554729-23554860)
chr7 (304-397)||(43863951-43864044)
chr7 (65-160)||(22552804-22552897)
chr7 (268-368)||(46515923-46516023)
chr7 (268-397)||(49092071-49092203)
chr7 (268-375)||(1113368-1113475)
chr7 (268-397)||(4796255-4796384)
chr7 (270-397)||(19495659-19495789)
chr7 (268-396)||(6570284-6570412)
chr7 (26-81)||(8359643-8359699)
chr7 (268-397)||(4178464-4178595)
chr7 (310-397)||(30026391-30026477)
chr7 (269-347)||(2479719-2479796)
chr7 (269-347)||(44847762-44847839)
chr7 (269-347)||(47264026-47264103)
chr7 (271-397)||(79773-79902)
chr7 (268-348)||(21989290-21989369)
chr7 (268-314)||(31733311-31733357)
chr7 (323-389)||(31733354-31733420)
chr7 (437-479)||(48491208-48491250)
chr7 (270-346)||(24515110-24515187)
chr7 (434-479)||(34311334-34311379)
chr7 (268-300)||(30025081-30025113)
[»] chr2 (42 HSPs)
chr2 (26-393)||(35447209-35447575)
chr2 (27-292)||(45726507-45726771)
chr2 (26-238)||(1632057-1632269)
chr2 (39-281)||(42261947-42262190)
chr2 (26-220)||(42288435-42288628)
chr2 (36-238)||(17450222-17450423)
chr2 (27-230)||(7450940-7451142)
chr2 (27-282)||(24397651-24397900)
chr2 (27-220)||(33647817-33648012)
chr2 (102-282)||(30218435-30218615)
chr2 (268-397)||(2837193-2837322)
chr2 (268-397)||(34389233-34389362)
chr2 (268-397)||(36318358-36318488)
chr2 (268-397)||(20522604-20522733)
chr2 (268-392)||(14698600-14698724)
chr2 (268-397)||(21630327-21630456)
chr2 (363-477)||(1632300-1632413)
chr2 (269-397)||(33528209-33528338)
chr2 (62-211)||(40935542-40935690)
chr2 (268-392)||(10706843-10706967)
chr2 (304-392)||(17865595-17865684)
chr2 (268-397)||(36988423-36988554)
chr2 (268-397)||(45099444-45099575)
chr2 (268-397)||(39483258-39483388)
chr2 (268-392)||(23078062-23078186)
chr2 (268-397)||(33118517-33118646)
chr2 (270-375)||(5723604-5723711)
chr2 (268-397)||(8389733-8389864)
chr2 (323-397)||(39284587-39284661)
chr2 (270-375)||(2334767-2334874)
chr2 (323-397)||(29867569-29867644)
chr2 (268-346)||(36206013-36206092)
chr2 (269-347)||(28258814-28258891)
chr2 (268-375)||(4503480-4503589)
chr2 (36-124)||(24197643-24197731)
chr2 (385-445)||(17629022-17629082)
chr2 (331-397)||(6595406-6595473)
chr2 (268-346)||(13569712-13569789)
chr2 (268-297)||(7450877-7450906)
chr2 (189-222)||(44750240-44750273)
chr2 (434-479)||(45726415-45726460)
chr2 (268-300)||(39284672-39284704)
[»] scaffold0002 (2 HSPs)
scaffold0002 (39-281)||(490782-491025)
scaffold0002 (268-397)||(434221-434353)
[»] scaffold0176 (2 HSPs)
scaffold0176 (28-231)||(18328-18530)
scaffold0176 (290-397)||(17635-17742)
[»] scaffold0197 (1 HSPs)
scaffold0197 (87-237)||(1792-1942)
[»] scaffold0066 (1 HSPs)
scaffold0066 (268-395)||(20764-20891)
[»] scaffold0006 (4 HSPs)
scaffold0006 (268-389)||(6067-6189)
scaffold0006 (269-397)||(2876-3005)
scaffold0006 (269-347)||(132916-132993)
scaffold0006 (310-397)||(149455-149539)
[»] scaffold0087 (2 HSPs)
scaffold0087 (269-402)||(36413-36546)
scaffold0087 (269-347)||(43598-43675)
[»] scaffold0016 (1 HSPs)
scaffold0016 (308-395)||(114278-114365)
[»] scaffold0098 (1 HSPs)
scaffold0098 (269-347)||(45582-45659)
[»] scaffold0140 (1 HSPs)
scaffold0140 (310-347)||(8054-8091)


Alignment Details
Target: chr6 (Bit Score: 296; Significance: 1e-166; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 197 - 528
Target Start/End: Complemental strand, 26661621 - 26661290
Alignment:
Q  197 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgt 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  26661621 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcataatcatgtcacgttttcccaaatcgt 26661522  T
Q  297 gacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 396  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26661521 gacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcac 26661422  T
Q  397 gttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttcttaaatcaccaaattttg 496  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26661421 gttttgcctccaggaccaaccatgcattcaacatcagatatcgtgacacggatgtcaaatcgtgtcatgattcttcgctttcttaaatcaccaaattttg 26661322  T
Q  497 agtcatccataacaatgtacatccacaggttc 528  Q
    ||||||||||||||||||||||||| ||||||    
T  26661321 agtcatccataacaatgtacatccaaaggttc 26661290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 197 - 528
Target Start/End: Complemental strand, 26767592 - 26767261
Alignment:
Q  197 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgt 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  26767592 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcataatcatgtcacgttttcccaaatcgt 26767493  T
Q  297 gacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 396  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26767492 gacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcac 26767393  T
Q  397 gttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttcttaaatcaccaaattttg 496  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26767392 gttttgcctccaggaccaaccatgcattcaacatcagatatcgtgacacggatgtcaaatcgtgtcatgattcttcgctttcttaaatcaccaaattttg 26767293  T
Q  497 agtcatccataacaatgtacatccacaggttc 528  Q
    ||||||||||||||||||||||||| ||||||    
T  26767292 agtcatccataacaatgtacatccaaaggttc 26767261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 27 - 397
Target Start/End: Original strand, 3809034 - 3809402
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccc-tcttttggttatccatgattcacat 124  Q
    |||||||||||||||||||||||| ||  |||||||||| |||||||| ||||||| ||||| ||||||||||| |||||||||| |||| |||||||||    
T  3809034 gactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggaaccaacccttttcacaagagcccccctcttttggttctccaagattcacat 3809133  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| | |    
T  3809134 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttgctc 3809232  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| ||||||| |||   |||||||||||||| ||||||||| ||||| ||||||||||| |||||   ||||| ||||| |||||||||    
T  3809233 aacaaatgggtcaaagaatgcttataatgtgttcagatccggacaaaatcgtatcacgatttcccaaatcatgacacatttggtacgtacgacccaaggt 3809332  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || ||||||||||||||||||||   |||  ||||||||||||| |||||| ||| |||||||||||||||||    
T  3809333 acgaccaaccttatcctgaaaac-tttcc--caagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacg 3809402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 27 - 397
Target Start/End: Complemental strand, 21593508 - 21593138
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||| ||| ||  |||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||| ||||||||||    
T  21593508 gactctccactcatgtgttttccaaccccatgaatcttctccaaaaggcaccaaccctttccccaagagccccctcttttggttctccaagattcacatc 21593409  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    || || |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||    |||||||||||||||||||||||||||||||||||    
T  21593408 ttaaatctttgaacctcacccaaagaccctcaacatttagtatcta-aaaccctaaaagttctaacctttggtttccatgagattcaccaagcttaccca 21593310  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    |||||| ||| || || ||| ||   |||||||| |||||| |||||||||||||| ||||||||||||||||||  |||||| || || ||||||||||    
T  21593309 acaaatgggttatggagtgcttacatagtgttcatatccggacaaaatcgtgtcacattttcccaaatcgtgacacggttggtacgaacgacccaaggta 21593210  T
Q  326 caaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||||||||||| |||||  | ||||||||||||||||| |||||| |||||||||||| ||||||||    
T  21593209 cgaccaaccttatcctaaaaacatgcccagcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacg 21593138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 18 - 201
Target Start/End: Complemental strand, 26800621 - 26800438
Alignment:
Q  18 ctctcaatagactctccactcatgtgtttcccatcctatgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatga 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800621 ctctcaatagactctccactcatgtgtttcccatcccatgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatga 26800522  T
Q  118 ttcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttc 201  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26800521 tccacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagttttctcctttggtttc 26800438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 26 - 285
Target Start/End: Complemental strand, 17762832 - 17762571
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatctt--ccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcac 122  Q
    ||||||||||||||||||||||||| ||  ||||||||   |||||||||||||||| | ||||| ||||||||||||||||||||| |||| |||||||    
T  17762832 agactctccactcatgtgtttcccaaccccatgaatctaacccccaaaaggcaccaaaccttttcacaagagccccctcttttggttctccaagattcac 17762733  T
Q  123 atcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttac 222  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||| | ||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  17762732 atcttgaagccttgaacttcacccaaagatcctcaacctttagtatcta-aaaccctaaaagttctctccttttgtttccatgagattcaccaagcttac 17762634  T
Q  223 ccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttt 285  Q
    ||||||||| || ||| || ||| ||   ||||||||||||||| |||||||||| |||||||    
T  17762633 ccaacaaatgggccatggagtgcttacatagtgttcagatccggacaaaatcgtgacacgttt 17762571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 2973265 - 2973456
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||| || |||||||||||||| ||  |||||||||||| |||| ||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  2973265 gactctgcattcatgtgtttcccaaccccatgaatcttcccaaaaaagcaccaacccttttcacaagagccccctcttttggttctccaagattcacatc 2973364  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaag 217  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  2973365 ttgaagctttgaacctcacccaaagaccttcaacctttagtatctacaaaccctaaaagttccctcctttggtttccatgagattcaccaag 2973456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 27 - 297
Target Start/End: Original strand, 26830450 - 26830721
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||| | ||||| ||||||||| ||  |||||||||| ||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||    
T  26830450 gactctgcgctcatctgtttcccaaccccatgaatcttctccaaaaggcaccaacctttttcccaagagactcctcttttggttctccaagattcacatc 26830549  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||| ||| ||||| || |||||||||||| |||||| |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26830550 ttgaagttttaaaccttactcaaagaccctcagcctttattatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagcttaccca 26830648  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttt-tcccaaatcgtg 297  Q
    |||||| | |||| || ||| |||  | |||| |||||||| |||| ||||||||||||| ||| ||||||||    
T  26830649 acaaatggatcatggagtgcttatatattgtttagatccggacaaattcgtgtcacgtttctccaaaatcgtg 26830721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 26 - 219
Target Start/End: Complemental strand, 5043470 - 5043278
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| |||| ||||| |||    
T  5043470 agactctccactcatgtgtttcccaaccccatgaatcttccc-aaaaggcaccaacccttttcccaagagccctctcttttggttctccaagattctcat 5043372  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagct 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||    
T  5043371 cttgaagctttgaacctcacccaaagaccctcaatctttagtatcta-aaaccctaaaagttccctcctttgatttccatgagattcaccaagct 5043278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 27 - 231
Target Start/End: Original strand, 22425151 - 22425356
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagag--ccccctcttttggttatccatgattcaca 123  Q
    |||||| ||| |||||||||| || ||  ||||||||||||||||| ||||||||| || |||||||||  ||||||||||||||| |||| ||||||||    
T  22425151 gactcttcacccatgtgtttcacaaccccatgaatcttccccaaaatgcaccaacccttatcccaagaggcccccctcttttggttctccaagattcaca 22425250  T
Q  124 tcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacc 223  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| | ||||| |||||| |||||||||||||||||||||||||||||||||| |    
T  22425251 tcttgaagctctgaaccacacccaaagaccctcaacctttagtatcta-aaaccct-aaagttccctcctttggtttccatgagattcaccaagcttatc 22425348  T
Q  224 caacaaat 231  Q
    ||||||||    
T  22425349 caacaaat 22425356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 52 - 294
Target Start/End: Complemental strand, 25073001 - 25072759
Alignment:
Q  52 cctatgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaag 150  Q
    ||||||||||| | ||||| |||||| | || |||||| |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||||||    
T  25073001 cctatgaatctcttcccaagaggcacaatcccttttcc-aagagccccc-ctttgggttctcaaagattcacatcttgaagctttgaacctcacccaaag 25072904  T
Q  151 accctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatg 250  Q
    ||||||||||||||||||||| ||||||||||||||  || ||||| ||||||||||||||| ||||||||| ||||||||  |||| || |||| |||     
T  25072903 accctcaacctttagtatctaaataccctaaaagttcacttctttgatttccatgagattcatcaagcttactcaacaaatgagtcaaaggatgcttata 25072804  T
Q  251 cagtgttcagatccgggcaaaatcgtgtcacg-ttttcccaaatc 294  Q
    ||||||||| |||| ||||| ||| ||||||| |||||| |||||    
T  25072803 cagtgttcaaatccaggcaatatcatgtcacgattttcctaaatc 25072759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 603410 - 603550
Alignment:
Q  31 ctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttga 129  Q
    |||||||||||||||||||| ||  |||||||||| |||||||||||||||| ||| | ||||||||||||||||||||| |||| ||||||||||||||    
T  603410 ctccactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaaccctttcctcaagagccccctcttttggttctccaagattcacatcttga 603509  T
Q  130 agctttgaacctcacccaaagaccctcaacctttagtatct 170  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  603510 agctttgaacctcatccaaagaccctcaacctttactatct 603550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 22964080 - 22964209
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||||||||| ||||||   |||| |||||| |  |||||||| ||||||||||||||||||||  |||||||||||| |||||    
T  22964080 caaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaat 22964179  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| ||||||||||||||| |||||    
T  22964180 cgtgtcacgttttcccaaaatcgtatcacg 22964209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 23824313 - 23824184
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||||||||| ||||||   |||| |||||| |  |||||||| ||||||||||||||||||||  |||||||||||| |||||    
T  23824313 caaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaat 23824214  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| ||||||||||||||| |||||    
T  23824213 cgtgtcacgttttcccaaaatcgtatcacg 23824184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 17757927 - 17757789
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatctt--ccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcac 122  Q
    ||||||||||||||||||||||||| ||  ||||||||   |||||||| ||||||||| ||||| |||||||||||| |||||||| ||||  ||||||    
T  17757927 agactctccactcatgtgtttcccaaccccatgaatctaacccccaaaatgcaccaacccttttcacaagagccccctattttggttctccaacattcac 17757828  T
Q  123 atcttgaagctttgaacctcacccaaagaccctcaacct 161  Q
    ||||| |||||||||| |||||||||||||| |||||||    
T  17757827 atcttcaagctttgaatctcacccaaagaccatcaacct 17757789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 24435687 - 24435566
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||| |||||||||| ||  |||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||| | | | ||||  ||||||    
T  24435687 caaattcgtgtcacgattggccaaatcgtgacacggttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgccaaacaagttgaaaat 24435588  T
Q  368 cttgtcacattttcccaaaatc 389  Q
    | |||||| |||||||||||||    
T  24435587 cgtgtcacgttttcccaaaatc 24435566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 31979899 - 31980028
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| || ||| |||| ||||||||||||||||||||| | ||||||||  ||||||    
T  31979899 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 31979998  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
      |||||| |||| ||||||||||| ||||    
T  31979999 tgtgtcacgtttttccaaaatcgtgacacg 31980028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 18234465 - 18234587
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  18234465 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 18234564  T
Q  367 tcttgtcacattttcccaaaatc 389  Q
    || | |||| |||||||||||||    
T  18234565 tcgtatcacgttttcccaaaatc 18234587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 603622 - 603715
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||| | ||||| ||| | ||||||||||||||||||  | ||||||||||||||||| |||||| |||||||||||||||||||||    
T  603622 ttggtgcgtacgatccaagatacgatcaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtcacgttttcccaaaatcgtgtcacg 603715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 9183399 - 9183488
Alignment:
Q  308 tgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||| ||||||||||| ||||||||||||||||||||  | |||||||| | |||||| |||||| |||||||||||||||||||||    
T  9183399 tgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagtcaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 9183488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 272 - 409
Target Start/End: Original strand, 26954656 - 26954792
Alignment:
Q  272 atcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttg 371  Q
    ||||||||| |||| || |||||||||||  |||| ||||||| ||||||||||| ||||||||||||||||||| | ||| |||| ||| |||||| ||    
T  26954656 atcgtgtcatgtttcccaaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgtcaagcatgccaaaaatcgtg 26954755  T
Q  372 tcacattttcccaaaatcgtgtcacgttttgcctccag 409  Q
     ||| ||||  | ||||||||||| |||||||||||||    
T  26954756 acacgttttatc-aaatcgtgtcatgttttgcctccag 26954792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 391
Target Start/End: Complemental strand, 10076906 - 10076783
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||| |||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||    |||||||   |||||    
T  10076906 caaagtcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtaatcagcaagttaaaaat 10076807  T
Q  368 cttgtcacattttcccaaaatcgt 391  Q
    | | |||| |||||||||||||||    
T  10076806 cgtatcacgttttcccaaaatcgt 10076783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 31086189 - 31086110
Alignment:
Q  268 caaaatcgtgtcacgttttc-ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    |||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||    
T  31086189 caaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 31086110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 5017211 - 5017133
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    |||||||||||||| ||||  ||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||    
T  5017211 caaaatcgtgtcacattttttcaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 5017133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 5571943 - 5571850
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||| ||||||||||| |||||||||| ||| |||||| | ||||||||  ||||||| |||||| ||||| |||||||||| ||||    
T  5571943 ttggtgcgtacgacccaaggtacgaccaaccttaacctaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatcgtgacacg 5571850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 17759494 - 17759427
Alignment:
Q  330 caaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||||||||||  ||||||||||||||||||  |||||| ||| |||||||||||||||||    
T  17759494 caaccttatcctgaaaacttgtccagcaagccgaaaattgtgtcacgtttccccaaaatcgtgtcacg 17759427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 33211534 - 33211658
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||| |||||  ||||||||||||  |||||||||||| |||||| |||| |  |||| |||||| |||||| | ||| |||||| |||||    
T  33211534 caaaatcgtgtcatgttttgtcaaatcgtgacatggttggtgcgtacgacccaaagtacgataaaccatatcctaaaaacgtgcccaacaagcc-aaaat 33211632  T
Q  368 cttgtcacattttcccaaaatcgtgt 393  Q
    | || ||| |||| ||||||||||||    
T  33211633 catgacacgtttttccaaaatcgtgt 33211658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 16452679 - 16452756
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||||||||    
T  16452679 aaatcgtgtcacgtttttccccaatcgtgccatgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16452756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 16452790 - 16452867
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||||||||    
T  16452790 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16452867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 21272704 - 21272575
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||| |||||||| ||  ||||||| |||||  |||||||||||| | ||||||||  ||||||||||||||||||||| | | | || | | |||||    
T  21272704 caaaattgtgtcacgattggccaaatcttgacacggttggtgcgtacgatccaaggtatgaccaaccttatcctgaaaacgtgccaaacatgtcaaaaat 21272605  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | || |||  || |||||||||||||||||    
T  21272604 cgtgacacgattacccaaaatcgtgtcacg 21272575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 5406548 - 5406655
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||| |||| |  | |||||||||| |||||    
T  5406548 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaat 5406647  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  5406648 cgtgtcac 5406655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 5410873 - 5410980
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||| |||| |  | |||||||||| |||||    
T  5410873 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaat 5410972  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  5410973 cgtgtcac 5410980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 30834884 - 30834994
Alignment:
Q  268 caaaatcgtgtcacgtttt--cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaa 364  Q
    |||||||||||||||||||  ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| ||    
T  30834884 caaaatcgtgtcacgttttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaa 30834983  T
Q  365 aatcttgtcac 375  Q
    |||| ||||||    
T  30834984 aatcgtgtcac 30834994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 5411583 - 5411712
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    |||||||||||| |||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||| |||||| |  | |||||||||| ||||     
T  5411583 aaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaa 5411682  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
      ||||||  ||| ||||||||||||||||    
T  5411683 tgtgtcacgattttccaaaatcgtgtcacg 5411712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 283 - 375
Target Start/End: Original strand, 5413812 - 5413905
Alignment:
Q  283 ttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcac 375  Q
    ||||||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||| ||||||    
T  5413812 ttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcac 5413905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 31405024 - 31405100
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaa 345  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||| ||||||| ||||||||||||||||||    
T  31405024 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacctaaggtacgaccaaccttatcctgaaa 31405100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 603553 - 603623
Alignment:
Q  215 aagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttt 285  Q
    |||||||| |||||||| ||||| ||||||| |||   |||||||||||||| ||||| |||| |||||||    
T  603553 aagcttactcaacaaatgggtcaaagaatgcttatattgtgttcagatccggacaaaagcgtgacacgttt 603623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 5407297 - 5407387
Alignment:
Q  308 tgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||| ||||||||||| |||||||||||| |||||| |  | |||||||||| ||||   ||||||  ||| ||||||||||||||||    
T  5407297 tgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacg 5407387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 386
Target Start/End: Original strand, 24714754 - 24714872
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||| |||||||| ||  ||| |||||||||  |||||  ||||  |||||  |||| ||||| ||||||||||||||| | ||||||||  ||||||    
T  24714754 caaaattgtgtcacgattggccatatcgtgacacggttggatcgtatgacccacagtacgaccaatcttatcctgaaaacgtgcccagcaagttgaaaat 24714853  T
Q  368 cttgtcacattttcccaaa 386  Q
    | |||||| |||| |||||    
T  24714854 cgtgtcacgtttttccaaa 24714872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 33160702 - 33160811
Alignment:
Q  268 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    |||||| ||||||||||||||   ||||||| ||   ||| ||||||| |||||| |||| ||||||||||||||||||| |  | |||||||||| |||    
T  33160702 caaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 33160801  T
Q  366 atcttgtcac 375  Q
    ||| ||||||    
T  33160802 atcgtgtcac 33160811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 478
Target Start/End: Complemental strand, 21593102 - 21593058
Alignment:
Q  434 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttc 478  Q
    |||||||||||||| || |||||| |||||||||||||| |||||    
T  21593102 aaatcgtgacacggttgccaaatcatgtcacgattcttcactttc 21593058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 233; Significance: 1e-128; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 26 - 397
Target Start/End: Original strand, 42435316 - 42435687
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    |||||||||| |||| ||||||||| ||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  42435316 agactctccattcatatgtttcccaaccccatgaatcttccccaaaagtcaccaacctttttcccaagagccccctcttttggttctccaagattcacat 42435415  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||     
T  42435416 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaa-accctaaaagtttcctcctttggtttccatgagattcaccaagcttaccg 42435514  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| |||||||||||   ||||||||| |||| ||||||| ||||||| |||||||||||||||||   ||||||||||| |||||||||    
T  42435515 aacaaatgggtcaaagaatgcatatattgtgttcagaaccggacaaaatcatgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggt 42435614  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || ||||||||||||||||||||  | | |||||| |||||||| |||||| ||| |||||||||||||||||    
T  42435615 acgaccaaccttatcctgaaaacttgccaagcaagacgaaaatcgtgtcacgtttccccaaaatcgtgtcacg 42435687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 22 - 397
Target Start/End: Complemental strand, 22976380 - 22976006
Alignment:
Q  22 caatagactctccactcatgtgtttcccatcctatgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattca 121  Q
    ||||||||||| ||||||||||||| | | || ||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| |||| ||||||    
T  22976380 caatagactcttcactcatgtgttttcaaccccatgaatcttccccaaaaggcaccaaccctttttccaagagcctcctcttttggttctccaagattca 22976281  T
Q  122 catcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagctta 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||  ||||||||||||| | ||||||||| |||||||    
T  22976280 catcttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaactctaaaagttcactcctttggtttcgaagagattcactaagctta 22976182  T
Q  222 cccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaa 321  Q
    |||||||||| ||| || || ||| ||   ||||||||||||| | |||| |||||| ||| |||||| ||||||||||   ||||||||| | ||||||    
T  22976181 cccaacaaatgggttatggagtgcttacatagtgttcagatccagacaaagtcgtgttacgatttcccgaatcgtgacacgtttggtgcgtgcgacccaa 22976082  T
Q  322 ggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
     |||| || |||||||||||||||||  ||| ||||||| ||||||| |||||| |||||||||||||||||||||    
T  22976081 tgtacgacaaaccttatcctgaaaacttgtcaagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 22976006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 84 - 375
Target Start/End: Complemental strand, 4283330 - 4283040
Alignment:
Q  84 tttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaa 183  Q
    |||||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  4283330 tttcccaaaagccccctcttttggttctccaagatccacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaa 4283232  T
Q  184 gtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgt 283  Q
    |||  |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| | |   |||||||||||||  |||||| ||||||||     
T  4283231 gttctctcctttggtttccatgagattcaccaagcttacacaacaaatgggtcaaagaatgcttgtattgtgttcagatccgaacaaaatggtgtcacga 4283132  T
Q  284 tttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 375  Q
    ||||||||||| | |||   ||||||| ||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||| ||||||    
T  4283131 tttcccaaatcctaacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcac 4283040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 26 - 396
Target Start/End: Complemental strand, 11383829 - 11383479
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||| |||||| |||| ||||||| ||  ||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||| |||| |||||||||    
T  11383829 agactttccacttatgtatttcccaaccccatgaatcttcctcaaaaggcaccaacccttttcacaatagccccctcttttggttctccaagattcacat 11383730  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| ||     
T  11383729 cttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagcttgcct 11383631  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| || ||| || ||| ||   ||| ||||||||||| |||||||||| ||||                    |||| ||||||| |||||| ||    
T  11383630 aacaaatgggacatggagtgcttacatagtattcagatccggacaaaatcgtgacacg--------------------gttgatgcgtacgacccaaagt 11383551  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 396  Q
    || |||||||||||| ||||||   | ||||||||| ||||||| |||||| ||||||||||||||||||||    
T  11383550 acgaccaaccttatcttgaaaatttgcccagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtcac 11383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 26 - 397
Target Start/End: Complemental strand, 40221588 - 40221236
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||| ||||  ||||||||||||||||| |||||||| || | |||||||||    
T  40221588 agactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcactaacccctttcccaagagccccctattttggttctcgaagattcacat 40221489  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtt-tcctcctttggtttccatgagattcaccaagcttacc 223  Q
    ||||||| | | ||||||| ||||||||| || |||||||||||| | | ||||||||||||  |||||| ||||||||||||||||||||||||||||     
T  40221488 cttgaagttctaaacctcatccaaagaccttccacctttagtatc-aaaaaccctaaaagttcccctcctatggtttccatgagattcaccaagcttact 40221390  T
Q  224 caacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaagg 323  Q
    |||||||| ||||| ||||||| |||   |||||||||||||  |||||||||| |||||                    ||||||||||| ||||||||    
T  40221389 caacaaatgggtcaaagaatgcttatattgtgttcagatccgaacaaaatcgtgacacgt--------------------ttggtgcgtacgacccaagg 40221310  T
Q  324 tacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
     || || |||||||||||||||||| ||||| ||||| ||||||| |||||| |||||||||||||||| ||||    
T  40221309 cacgacaaaccttatcctgaaaacgtgtccaacaagctgaaaatcgtgtcacgttttcccaaaatcgtgacacg 40221236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 27 - 231
Target Start/End: Complemental strand, 44353634 - 44353433
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||| ||| ||  |||||||||| |||||||||||||||| | ||| ||||||||||||||||| ||| |||| |||||   ||    
T  44353634 gactctccactcatgtgttttccaaccccatgaatcttctccaaaaggcaccaaccctcttcacaagagccccctcttttagttctccaagattc---tc 44353538  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44353537 ttgaagttttaaacctcacccaaagaccctcaacctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttaccca 44353439  T
Q  226 acaaat 231  Q
    ||||||    
T  44353438 acaaat 44353433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 2999841 - 3000037
Alignment:
Q  22 caatagactctccactcatgtgtttcccatcct-atgaatctt-ccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgatt 119  Q
    |||| ||||||| ||||||||||||| |||||  ||||||||| ||||||||| |||||||| | | ||||||| ||||||||||||||| |||| ||||    
T  2999841 caattgactctctactcatgtgtttctcatccccatgaatctttccccaaaagacaccaaccatat-cccaagaaccccctcttttggttctccaagatt 2999939  T
Q  120 cacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaag 217  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||| |||||||||||||||    
T  2999940 cacatcttgaagctttgaacatcacccaaagaccctcaacctttagtatctaaattccctaaaagttctctcctttggtttctatgagattcaccaag 3000037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 26 - 173
Target Start/End: Complemental strand, 40328622 - 40328474
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||||    
T  40328622 agactctacactcatgtgtttcccatccccatgaatcttccctaaaaggcaccaacccttttcccaagaaccccctcttttggttctccaagattcacat 40328523  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctaca 173  Q
    | ||||||||||||||||||||||||||||| || ||||||||||||||    
T  40328522 catgaagctttgaacctcacccaaagaccctaaatctttagtatctaca 40328474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 30143161 - 30143032
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||| |||||| |||| |||||||||||||| |||||  ||||||||||||||||||    
T  30143161 caaaatcgtgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaaagtacgaccaaccttatccttaaaacttgtccagcaagccgaaaat 30143062  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||||||||||||||||||||||||    
T  30143061 cgtgtcacattttcccaaaatcgtgtcacg 30143032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 20686456 - 20686586
Alignment:
Q  99 ctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggt 198  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||| |||||||||||  |||||| |||||| |||||||||||    
T  20686456 ctcttttggttatccaagattcacatcttgaagctttgaacttcacc-aaagatcctcaacatttagtatctaagtaccctgaaagttccctcctttggt 20686554  T
Q  199 ttccatgagattcaccaagcttacccaacaaa 230  Q
    ||| |||||||||||| |||||||||||||||    
T  20686555 ttcaatgagattcaccgagcttacccaacaaa 20686586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 4731477 - 4731348
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||| |||||||||||||  |||||||| |||  |||||||||| ||||| ||||| ||||||||| ||||||||||||||||||    
T  4731477 caaaatcgtgtcacgttttgccaaatcgtgacacagttggtgcctacggcccaaggtacgaccaatcttattctgaaaacgtgtccagcaagccgaaaat 4731378  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||  |||||||||||||||||||||    
T  4731377 catgtcatgttttcccaaaatcgtgtcacg 4731348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 271 - 397
Target Start/End: Complemental strand, 15212602 - 15212476
Alignment:
Q  271 aatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatctt 370  Q
    ||||||||||| |||||| |||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  |  |||||||||||||||| |    
T  15212602 aatcgtgtcacattttcctaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgt 15212503  T
Q  371 gtcacattttcccaaaatcgtgtcacg 397  Q
    ||||| |||||||||||||||||||||    
T  15212502 gtcacgttttcccaaaatcgtgtcacg 15212476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 43036242 - 43036113
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| | ||||||||| | ||||||||||||||||||  | ||| |||| |||||||    
T  43036242 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgatccaaggtacgatcaaccttatcctgaaaacttgcccaacaagtcgaaaat 43036143  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||| ||||||||||||||||    
T  43036142 cgtgtcacgtttttccaaaatcgtgtcacg 43036113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 290 - 397
Target Start/End: Complemental strand, 27811095 - 27810988
Alignment:
Q  290 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 389  Q
    |||||||||||   ||||||||||||||||||| ||| ||||||||||||||||||||  | ||||||||||||||||| |||||||||||| |||||||    
T  27811095 aaatcgtgacacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacattttctcaaaatc 27810996  T
Q  390 gtgtcacg 397  Q
    ||||||||    
T  27810995 gtgtcacg 27810988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 90 - 237
Target Start/End: Complemental strand, 40585503 - 40585356
Alignment:
Q  90 aagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcc 189  Q
    |||||||| |||||||| || || |  ||||||||||||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||       
T  40585503 aagagcccactcttttgattctcaaatattcacatcttgaagctttgaacctcaaccaaagactcttaacctttagtatctaaatactctaaaagttatt 40585404  T
Q  190 tcctttggtttccatgagattcaccaagcttacccaacaaattggtca 237  Q
    ||||||||||| ||||||||| | |||||| || |||||||| |||||    
T  40585403 tcctttggttttcatgagattaatcaagctcacgcaacaaatgggtca 40585356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 12702987 - 12703117
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaa 366  Q
    ||||||||||||||||||| ||||||||||||||    |||||||||| |||||| |||| |||||||||||||||||| |  |   ||||||| |||||    
T  12702987 caaaatcgtgtcacgtttttcccaaatcgtgacacgtatggtgcgtacgacccaatgtacgaccaaccttatcctgaaagcttgcttagcaagctgaaaa 12703086  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||||||||    
T  12703087 tcgtgtcacgttttcccaaaatcgtgtcacg 12703117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 290 - 397
Target Start/End: Complemental strand, 4733622 - 4733515
Alignment:
Q  290 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 389  Q
    |||||||||||  |||||||||||| ||||||||||| || |||  ||||||||||||| ||  || |||||||||||| |||||| |||||||||||||    
T  4733622 aaatcgtgacacggttggtgcgtacgacccaaggtacgacaaactgtatcctgaaaacgtgtttagaaagccgaaaatcgtgtcacgttttcccaaaatc 4733523  T
Q  390 gtgtcacg 397  Q
    ||||||||    
T  4733522 gtgtcacg 4733515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 5702195 - 5702065
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    |||||||||| |||||||| |||||||||||||   ||||||||||||| ||||||||| ||||||||||||||||||| |   ||||||||   |||||    
T  5702195 caaaatcgtgacacgttttgccaaatcgtgacacgattggtgcgtacaatccaaggtacgaccaaccttatcctgaaaatgtacccagcaagtttgaaaa 5702096  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||| ||||||||||| ||||    
T  5702095 tcgtgtcacgtttttccaaaatcgtgacacg 5702065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 1345718 - 1345848
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt--acaaccaaccttatcctgaaaacgggtccagcaagccgaaa 365  Q
    |||||||||||||||||| |  ||| |||||||  |||| ||||||| |||||||||  || ||||||||||||||||||||| ||| ||||||| ||||    
T  1345718 caaaatcgtgtcacgtttcctaaaaccgtgacatggttgatgcgtacgacccaaggtgtacgaccaaccttatcctgaaaacgtgtcaagcaagctgaaa 1345817  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||  |||||||||||| | |||||||||||||    
T  1345818 attgtgtcacattttctc-aaatcgtgtcacg 1345848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 1746566 - 1746697
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  1746566 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 1746665  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| ||||||  ||||||||||||||||||||    
T  1746666 atcgtgtcacgatttcccaaaatcgtgtcacg 1746697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 34256854 - 34256983
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||||||||| ||||||||||||| |  |  ||||||||| |||||    
T  34256854 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacaaccaatcttatcctgaaaatcttgctcagcaagccaaaaat 34256953  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||  ||||||||||||||||||||    
T  34256954 cgtgtcacgatttcccaaaatcgtgtcacg 34256983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 397
Target Start/End: Original strand, 4743548 - 4743672
Alignment:
Q  274 cgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaaatcttgt 372  Q
    ||||| ||||||| |||||| ||||||  |||| ||||||| ||||| ||||| ||||||||||||||| |||||| | | |||||| |||||||| |||    
T  4743548 cgtgtgacgttttgccaaattgtgacacggttgatgcgtacgacccacggtacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgt 4743647  T
Q  373 cacattttcccaaaatcgtgtcacg 397  Q
    ||| ||| | |||||||||||||||    
T  4743648 cacgtttcctcaaaatcgtgtcacg 4743672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 19175445 - 19175318
Alignment:
Q  270 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatc 368  Q
    ||||||| ||||||||||| |||||||| ||   ||||||| ||| |||||||||| ||||||||||||||||||||||   ||||||||   |||||||    
T  19175445 aaatcgtatcacgttttcc-aaatcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaacgtacccagcaagtttgaaaatc 19175347  T
Q  369 ttgtcacattttcccaaaatcgtgtcacg 397  Q
     |||||| |||||||||||||||| ||||    
T  19175346 atgtcacgttttcccaaaatcgtgacacg 19175318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 268 - 344
Target Start/End: Complemental strand, 33351969 - 33351893
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaa 344  Q
    ||||||||||||||||||||||||||| |||||   ||||||||||  ||||||||||| |||||||||||||||||    
T  33351969 caaaatcgtgtcacgttttcccaaatcatgacacgtttggtgcgtatgacccaaggtacgaccaaccttatcctgaa 33351893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 395
Target Start/End: Original strand, 34254678 - 34254805
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | ||||||| || |||||    
T  34254678 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaatccaaaaat 34254777  T
Q  368 cttgtcacattttcccaaaatcgtgtca 395  Q
    | ||||||  ||||||||||||||||||    
T  34254778 cgtgtcacgatttcccaaaatcgtgtca 34254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 3846153 - 3846321
Alignment:
Q  36 ctcatgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagct 133  Q
    ||||||||||||||| ||  |||||||| |||||||||| |||||||  |||||| |||||| |  |||||||||| | || |||||||||  |||| ||    
T  3846153 ctcatgtgtttcccaaccccatgaatctctccccaaaagacaccaactcttttcc-aagagctct-tcttttggttcttcaagattcacattatgaacct 3846250  T
Q  134 ttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccat 204  Q
    ||||| ||||| |||  |||||||||||||||| || |  |||||| ||||||| ||||||||||||||||    
T  3846251 ttgaatctcactcaagaaccctcaacctttagtttcaaagtaccctgaaagttttctcctttggtttccat 3846321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 211
Target Start/End: Complemental strand, 40535652 - 40535510
Alignment:
Q  66 ccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttag 165  Q
    |||||||||| ||||| ||| | ||||| ||||||||||||||| |  | ||| |||| |||||| |||||||||  ||||||||||| |||| ||||||    
T  40535652 ccaaaaggcatcaacccttt-ctcaagaaccccctcttttggttctaaaagatccacaacttgaaactttgaacc--acccaaagaccatcaatctttag 40535556  T
Q  166 tatctacataccctaaaagtttcctcctttggtttccatgagattc 211  Q
    |||||| ||||||||||| |||  | ||||  ||||||||||||||    
T  40535555 tatctaaataccctaaaaattttgtactttaatttccatgagattc 40535510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 213
Target Start/End: Complemental strand, 11136983 - 11136796
Alignment:
Q  27 gactctccactcatgtgtttccc-atcctatgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    |||||||||||||||||||| || | || ||||| || ||||||||||||| | |||  ||||| |||||||| ||||||| ||| ||||  ||||| ||    
T  11136983 gactctccactcatgtgttttcctacccaatgaacctctccccaaaaggcatcgaccaatttcc-aagagccctctcttttagttctccaaaattcatat 11136885  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcac 213  Q
     | ||   |||||| ||||||||||||||| ||||||||||| | ||  | |||||||| | || |||||| |||||||||||||||||    
T  11136884 ttggacaatttgaatctcacccaaagacccccaacctttagtttttaagttccctaaaaatctcatcctttagtttccatgagattcac 11136796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 3817784 - 3817840
Alignment:
Q  151 accctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgag 207  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||||||||||||||    
T  3817784 accctcaacctttagtttctaagtaccctaaaagttttctcctttggtttccatgag 3817840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 23799291 - 23799211
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 348  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| |||||| |||| ||||||||||| || ||||||    
T  23799291 caaaatcgtgtcacgtttgtccaaatcgtgacacaattggtgcgtacgacccaacgtacgaccaaccttattctaaaaacg 23799211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 433 - 479
Target Start/End: Complemental strand, 4731313 - 4731267
Alignment:
Q  433 gaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 479  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4731313 gaaatcgtgacacggttgtcaaatcgtgtcacgattcttcactttct 4731267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 210
Target Start/End: Original strand, 9633902 - 9634045
Alignment:
Q  65 cccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaaccttta 164  Q
    ||||||||| |||||||||||||  |||||| || ||||||| |||| || ||||||||| | ||  ||||||| |||||||||||||  || |||||||    
T  9633902 cccaaaaggtaccaacctttttc--aagagcgccatcttttgattattcaagattcacatttggacactttgaatctcacccaaagacgttcgaccttta 9633999  T
Q  165 gtatctacataccctaaaagtttcctcctttggtttccatgagatt 210  Q
    || ||||  | | |||||||||  ||| |  |||||||||||||||    
T  9634000 gtttctaagttctctaaaagttgtctcataaggtttccatgagatt 9634045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 10020224 - 10020150
Alignment:
Q  84 tttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaa 158  Q
    |||||||||||||||||||||||||| || | ||||||||| ||||   |||||| |||||| ||||||||||||    
T  10020224 tttcccaagagccccctcttttggttctctaagattcacatattgatcatttgaatctcacctaaagaccctcaa 10020150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 397
Target Start/End: Complemental strand, 42497986 - 42497904
Alignment:
Q  316 acccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||| || |||||||||||||||| |  | |||||||||| | |||| ||||||| ||||||||||||||||||||    
T  42497986 acccaaggtacgactaaccttatcctgaaaatcttgcccagcaagccaataatcgtgtcacaatttcccaaaatcgtgtcacg 42497904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 4696307 - 4696263
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 348  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  4696307 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacg 4696263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 397
Target Start/End: Complemental strand, 10014957 - 10014849
Alignment:
Q  289 caaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaat 388  Q
    ||||||||||||   ||| ||| ||| ||||||||||| ||||||||||||||| ||||| | | |||| ||| |||||| |||||   || ||||||||    
T  10014957 caaatcgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 10014858  T
Q  389 cgtgtcacg 397  Q
    |||||||||    
T  10014857 cgtgtcacg 10014849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 31218077 - 31217947
Alignment:
Q  268 caaaatcgtgtcacgttttc-ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    |||||||||||||||||||  || ||||||| ||   ||| ||||||  | ||||||||| |||||||||||||| |||| |  | ||| |||||| |||    
T  31218077 caaaatcgtgtcacgttttttcccaatcgtgtcacgattgatgcgtatgatccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaa 31217978  T
Q  366 atcttgtcacattttcccaaaatcgtgtcac 396  Q
    ||| ||||||  |||||||||||||||||||    
T  31217977 atcgtgtcacgatttcccaaaatcgtgtcac 31217947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 17982473 - 17982364
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| |||||||||||||| |||| |  | |||||||||| |||    
T  17982473 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaa 17982374  T
Q  366 atcttgtcac 375  Q
    ||| ||||||    
T  17982373 atcgtgtcac 17982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 10101543 - 10101612
Alignment:
Q  84 tttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagacc 153  Q
    ||||||||||||| |||||||||||| |||| | ||||||| ||||  | ||||| ||||| ||||||||    
T  10101543 tttcccaagagcctcctcttttggttctccaaggttcacattttgacccattgaatctcactcaaagacc 10101612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 19948669 - 19948778
Alignment:
Q  268 caaaatcgtgtcacg-ttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    ||||||||||||||| ||||||| ||||||| ||   ||| ||||||| | ||||||||| ||||| |||||| | |||| |  |||||||||||| |||    
T  19948669 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaacttatcataaaaatcttgtccagcaagccaaaa 19948768  T
Q  366 atcttgtcac 375  Q
    ||| ||||||    
T  19948769 atcgtgtcac 19948778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 27 - 397
Target Start/End: Complemental strand, 11400 - 11030
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||  |||||||||| |||||||||||||||| ||| |||||||||||| |||||||||| |||| ||||||||||    
T  11400 gactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaaccctttccccaagagccccatcttttggttctccaagattcacatc 11301  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  11300 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaa-accctaaaagttccctcctttggtttccatgagatttaccaagcttaccca 11202  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    |||||| ||||| |||||||||||   ||||||||| |||| ||||||||||||||| |||||||||||||||||   ||||||||||| |||||| |||    
T  11201 acaaatgggtcaaagaatgcatatattgtgttcagaaccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgta 11102  T
Q  326 caaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||||||||||||||||  | ||||||| ||||||||| |||||||||| |||||||||||||||||    
T  11101 cgaccaaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacatttccccaaaatcgtgtcacg 11030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 228; Significance: 1e-125; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 27 - 397
Target Start/End: Complemental strand, 6655798 - 6655428
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||  |||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||| ||||||||||    
T  6655798 gactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaaccctttccccaagagccccctcttttggttctccaagattcacatc 6655699  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    || ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  6655698 ttaaagttttgaacctcacccaaagaccctcaacctttagtatctaaa-accctaaaagttccctcctttggtttccatgagatttaccaagcttaccca 6655600  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    |||||| ||||| |||||||||||   ||||||||| |||| ||||||||||||||| |||||||||||||||||   ||||||||||| |||||| |||    
T  6655599 acaaatgggtcaaagaatgcatatattgtgttcagaaccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgta 6655500  T
Q  326 caaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||||||||||||||||  | ||||||| ||||||||| |||||||||| |||||||||||||||||    
T  6655499 cgaccaaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacatttccccaaaatcgtgtcacg 6655428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 26 - 397
Target Start/End: Complemental strand, 40630827 - 40630456
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||| |||||||||    
T  40630827 agactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcacaaaagctccctcttttggttctccaagattcacat 40630728  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40630727 cttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagtttcatcctttggtttccatgagattcaccaagcttaccc 40630629  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| |||||||||||    ||||||||||||| ||||||||||||||| |||||||||||||||||   ||||||| ||  |||||||||    
T  40630628 aacaaatgggtcaaagaatgcatatattatgttcagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcatatgacccaaggt 40630529  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || ||||||||||| ||||||| | | | ||||||| ||||||| |||||| |||||||||||||||| ||||    
T  40630528 acgaccaaccttattctgaaaatgtgcctagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgacacg 40630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 27 - 397
Target Start/End: Complemental strand, 26364107 - 26363737
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||  |||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  26364107 gactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggccccaacccttttcacaagagccccctcttttggttctccaagattcacatc 26364008  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  26364007 ttgaagctttgaacctcacccaaaggccctcaacctttagtatctaaa-accctaaaagttccctcccttggtttccatgagattcaccaagcttaccca 26363909  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    |||||| |||||| || ||| ||   ||||||||||||||| ||||||||||||||| |||||||||| ||||||   ||||||||||| ||||||||||    
T  26363908 acaaatgggtcatggagtgcttacatagtgttcagatccggacaaaatcgtgtcacgatttcccaaattgtgacacgtttggtgcgtacgacccaaggta 26363809  T
Q  326 caaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
      ||||||||||||||||||||  |  |||||||||||||||| |||||| |||||||||||||||||||||    
T  26363808 tgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 26363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 26 - 391
Target Start/End: Original strand, 50674171 - 50674536
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  ||||||||| |||| |||||||||||| |||||   ||||||||||||||||||| |||| |||||||||    
T  50674171 agactctccactcatgtgtttcccaaccccatgaatctttcccataaggcaccaacccttttcattagagccccctcttttggttctccaagattcacat 50674270  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  50674271 cttgaagctttgaacctcacccaaagacccttaacatttagtatttaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttaccc 50674369  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| |||||||||||   |||||||||||||| |||||| |||||| | |||||||||||||||||   ||||||||||| |||||||||    
T  50674370 aacaaatgggtcaaagaatgcatatattgtgttcagatccggacaaaattgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggt 50674469  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgt 391  Q
    |||||||||||||||||||||||| | ||||||||| ||||||| |||||| |||||||||||||||    
T  50674470 acaaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcacgttttcccaaaatcgt 50674536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 26 - 397
Target Start/End: Original strand, 27417276 - 27417647
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||| ||||||||  ||||||||||||||| |||||||||| |||| |||||||||    
T  27417276 agactctccactcatgtgtttcccaaccccatgaatcttccccaaaagacaccaacccctttcccaagagccccttcttttggttctccaagattcacat 27417375  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  27417376 cttaaagctttgaacctcacccaaagaccctcaacctttagtatctaaa-accctaaaagttccctcctttggttttcatgagattcaccaagcttaccc 27417474  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| |||||| || ||| |||  |||||| |||||||| ||||||||||||||| |||||||||||||||||  |||| ||||||| |||||||||    
T  27417475 aacaaatgggtcatggagtgcttatatagtgtttagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacggttgatgcgtacgacccaaggt 27417574  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||||||||||||||| || | | | ||||  ||||||| |||||| |||||||||||||||||||||    
T  27417575 acgaccaaccttatcctgaaaccgtgccgaacaagttgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 27417647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 26 - 397
Target Start/End: Complemental strand, 54882863 - 54882512
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||| ||||||||||||||||| ||  |||||||||| |||||||||||||||| |||||  |||||||||||||||||||| |||| |||||||||    
T  54882863 agactctacactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaacccttttcataagagccccctcttttggttctccaagattcacat 54882764  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
     |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  54882763 tttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcactaagcttaccc 54882665  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    |||||||  |||| |||||||||||| |||||||||||||||||||||| |||||||                     |||||||||||| |||||||||    
T  54882664 aacaaatgagtcaaagaatgcatatgtagtgttcagatccgggcaaaattgtgtcac--------------------agttggtgcgtacgacccaaggt 54882585  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || | ||||||||||||||||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  54882584 acgatcaaccttatcctgaaaacgtgtccaacaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 54882512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 26 - 387
Target Start/End: Original strand, 50263023 - 50263383
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||||    
T  50263023 agactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaaccctttttccaagagccccctcttttggttctccaagattcacat 50263122  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| | |||||||||||| ||||||||||||| ||||||||||||||| |||   |    
T  50263123 cttgaagctttgaacctcacccaaagactctcaacctttagtgtcta-aaaccctaaaagttccctcctttggttttcatgagattcaccaaactttttc 50263221  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| ||| ||| |||   |||||||||||| | ||||||||||||||| ||||||||| |||||||   ||||||||||| | |||||||    
T  50263222 aacaaatgggtcaaagagtgcttataatgtgttcagatccagacaaaatcgtgtcacgatttcccaaaccgtgacacatttggtgcgtacga-ccaaggt 50263320  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaa 387  Q
    || ||||||||||| ||||||||    ||| ||||||||||||| ||| || |||||||||||    
T  50263321 acgaccaaccttattctgaaaacttacccaccaagccgaaaatcgtgttacgttttcccaaaa 50263383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 27 - 397
Target Start/End: Complemental strand, 2209550 - 2209192
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| |||| ||||||||||    
T  2209550 gactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcccaagagtcccctcgtttggttctccaagattcacatc 2209451  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  2209450 ttgaagctttgaacctcacccaaagaccctcaatctttagtatcta-aaaccctaaaagttccctcatttgctttccatgagattcaccaagcttaccca 2209352  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    |||||| ||||| ||||||| |||   |||||||||| | | ||||||  ||||||| ||||||||||||||||    |||||||            |||    
T  2209351 acaaatgggtcaaagaatgcttatattgtgttcagattcagacaaaattttgtcacgatttcccaaatcgtgacgcgtttggtgc------------gta 2209264  T
Q  326 caaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||||||||||||||||  | | ||||| ||||||||| |||||| ||| |||||||||||||||||    
T  2209263 cgaccaaccttatcctgaaaacttgcctagcaaaccgaaaatcgtgtcacgtttccccaaaatcgtgtcacg 2209192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 26 - 230
Target Start/End: Complemental strand, 8665250 - 8665046
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||| ||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  8665250 agactctccactcctgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacat 8665151  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||||||||     
T  8665150 cttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttctctcctttggtttccatgagattcaccaagcttacct 8665052  T
Q  225 aacaaa 230  Q
    ||||||    
T  8665051 aacaaa 8665046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 27 - 282
Target Start/End: Original strand, 55085691 - 55085946
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||| |||| |||||    
T  55085691 gactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaaccctttccccaagagccccctcttttggttctccaagatttacatc 55085790  T
Q  126 ttg-aagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  55085791 ttgaaagcttttaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttcattgagattcaccaagcttaccc 55085889  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacg 282  Q
    ||||||| ||||| ||||||| | |  || |||||||| |||||||||||||| ||||    
T  55085890 aacaaatgggtcaaagaatgc-tttatagagttcagattcgggcaaaatcgtgacacg 55085946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 379221 - 379028
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  379221 gactctccactcatgtgtttcccattctcatgaatcttccccaaaaggcaccgacccttttcacaagagccccctcttttggttctccaagattcacatc 379122  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagct 219  Q
     |||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||  ||||||||||||||| |||||||||||||||    
T  379121 atgaagctttgaacctcacccaaagtccctcaacctttagtatctacaaatcctaaaagttctctcctttggtttccacgagattcaccaagct 379028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 26 - 241
Target Start/End: Complemental strand, 41964258 - 41964044
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    |||||||| |||||||||||||||| ||  ||||||||| ||||||||  || |||| ||||||||||||||||||||||||||| |||| |||||||||    
T  41964258 agactctctactcatgtgtttcccaaccccatgaatctttcccaaaag--actaacccttttcccaagagccccctcttttggttctccaagattcacat 41964161  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||| | |    
T  41964160 catgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagttccctcctttgatttccatgagattcaccaaactttctc 41964061  T
Q  225 aacaaattggtcataga 241  Q
    | ||||| |||||||||    
T  41964060 accaaatgggtcataga 41964044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 27 - 230
Target Start/End: Complemental strand, 33989704 - 33989501
Alignment:
Q  27 gactctccactcatgtgtttccca-tcctatgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||| | |||||||||||||| |||||||| | || ||||||||||    
T  33989704 gactctccactcatgtgtttcccaatcccatgaatctctcccaaaaggcaccaaccttct-cccaagagccccctattttggttcttcaagattcacatc 33989606  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||  || ||||||||||||||||||||||||||||| ||||    
T  33989605 ttgaagctttgaacctcacccaaagaccctcaaactttagtatctaaataccctaaaagttatctgctttggtttccatgagattcaccaagcttgccca 33989506  T
Q  226 acaaa 230  Q
    |||||    
T  33989505 acaaa 33989501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 26 - 285
Target Start/End: Original strand, 46569871 - 46570130
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||| ||||||||| ||||||||| ||  ||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||| |||| |||||||||    
T  46569871 agactttccactcatttgtttcccaaccccatgaatctttcccaaaaggcaccaatccttttcacaagagccccctcttttggttctccaagattcacat 46569970  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||| |||    
T  46569971 cttgaagctttgaacctcacctaaagaccttcaacatttagtatcta-aaaccctaaaatttccctcctttggtttccatgagattcaccaagcttgccc 46570069  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttt 285  Q
    ||||||| |||||| |  ||| ||   ||||||||||||| | |||||||||| |||||||    
T  46570070 aacaaatgggtcatggtgtgcttacatagtgttcagatccagacaaaatcgtgacacgttt 46570130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 46703343 - 46703152
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    |||||||||| |||||| ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| || || | |||||||||    
T  46703343 agactctccattcatgt-tttcccatccccatgaatcttccccaaaaggcaccaacccttttcccaagagccccctcttttgattctcgaagattcacat 46703245  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||||||||||||||||||    
T  46703244 cttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttctctcctttggtttccatgagattcaccaagc 46703152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 12073235 - 12073042
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacc-tttttcccaagagccccctcttttggttatccatgattcaca 123  Q
    ||||||| ||||||||||||| ||| ||  |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| |||| |||| |||    
T  12073235 agactcttcactcatgtgttttccaaccccatgaatcttccc-aaaaggcaccaaccctttttcccaagagcccc-tcttttggttctccaagatttaca 12073138  T
Q  124 tcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagctt 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||||||    
T  12073137 tcttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccatcctttggtttccatgagattcaccaagctt 12073042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 8653385 - 8653239
Alignment:
Q  83 ttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaa 182  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  8653385 ttttcccaagagccccctcttttggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaa 8653287  T
Q  183 agtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 230  Q
    ||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  8653286 agttctctcctttggtttccatgagattcaccaagcttacctaacaaa 8653239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 35662283 - 35662094
Alignment:
Q  28 actctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatct 126  Q
    |||||||| |||||||||| ||| ||  ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| ||||||||| |    
T  35662283 actctccattcatgtgttttccaaccccatgaatcttccccaaaaggcaccaacccttttcctaagagccccctcttttggttctccaagattcacatat 35662184  T
Q  127 tgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaag 217  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | | ||||||||||  ||| |||||| ||||||||||||||||||    
T  35662183 tgaagctttgaacctcacccaaagactctcaacctttagtatcta-aaatcctaaaagttctctcatttggtgtccatgagattcaccaag 35662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 77 - 230
Target Start/End: Complemental strand, 10071676 - 10071524
Alignment:
Q  77 caacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacatac 176  Q
    ||||| ||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||    
T  10071676 caacccttttcacaagagccccctcttttggttctccaagattcacatcttaaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaac 10071578  T
Q  177 cctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 230  Q
    | |||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  10071577 cttaaaagttccctcctttgatttccatgagattcaccaagattacccaacaaa 10071524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 86 - 231
Target Start/End: Original strand, 22883138 - 22883283
Alignment:
Q  86 tcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagt 185  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||| |  |||||||||||||||||| ||||||||||| |    
T  22883138 tcccaagagccccctctttttgttctccaagattcacatcttgaagctttgaacctcactcaaatagtctcaacctttagtatctaaataccctaaaatt 22883237  T
Q  186 ttcctcctttggtttccatgagattcaccaagcttacccaacaaat 231  Q
    | |||| |||||||||||||||||||||||||||||| ||||||||    
T  22883238 tccctcatttggtttccatgagattcaccaagcttactcaacaaat 22883283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 86 - 231
Target Start/End: Original strand, 22934802 - 22934947
Alignment:
Q  86 tcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagt 185  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||| |  |||||||||||||||||| ||||||||||| |    
T  22934802 tcccaagagccccctctttttgttctccaagattcacatcttgaagctttgaacctcactcaaatagtctcaacctttagtatctaaataccctaaaatt 22934901  T
Q  186 ttcctcctttggtttccatgagattcaccaagcttacccaacaaat 231  Q
    | |||| |||||||||||||||||||||||||||||| ||||||||    
T  22934902 tccctcatttggtttccatgagattcaccaagcttactcaacaaat 22934947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 34570763 - 34570892
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  34570763 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgtccagcaagccgaaaat 34570862  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||||||||    
T  34570863 cgtgtcacgttttcccaaaatcgtgtcacg 34570892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 38811400 - 38811590
Alignment:
Q  22 caatagactctccactcatgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgatt 119  Q
    |||| ||||||||||| |||||||||| | ||| |||||||| ||| |||||| |||||||| ||| |||||||||||| ||||| |||| |||| ||||    
T  38811400 caattgactctccacttatgtgtttcctaacctcatgaatctctccgcaaaagacaccaacccttt-cccaagagcccc-tctttgggttctccaagatt 38811497  T
Q  120 cacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattca 212  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||    
T  38811498 cacatcttaaagctttgaacctcacccaaataccctcaacctttagtatctaagtaccctaaaagttccctcctttagtttccatgagattca 38811590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 35370722 - 35370859
Alignment:
Q  86 tcccaagagccccctctttt-ggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaag 184  Q
    |||||||| ||||||||||| |||| |||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  35370722 tcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctctcccaaagaccctcaacctttagtatctaaataccttaaaag 35370821  T
Q  185 tttcctcctttggtttccatgagattcaccaagcttac 222  Q
    || ||||||||| ||||||||||||||| |||||||||    
T  35370822 ttccctcctttgatttccatgagattcatcaagcttac 35370859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 8647981 - 8647861
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||| ||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  8647981 agactctccactcctgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacat 8647882  T
Q  125 cttgaagctttgaacctcacc 145  Q
    |||||||||||||||||||||    
T  8647881 cttgaagctttgaacctcacc 8647861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 67 - 237
Target Start/End: Complemental strand, 3785891 - 3785722
Alignment:
Q  67 caaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 166  Q
    ||||||||||||||| |||||| |||||||||||||||||||| | || ||||||||||||||||||||||| ||| || |||||| |||||||||||||    
T  3785891 caaaaggcaccaacccttttcc-aagagccccctcttttggttcttcaagattcacatcttgaagctttgaatctcgcctaaagactctcaacctttagt 3785793  T
Q  167 atctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 237  Q
    ||| |  || |||||||||| | ||||||| |||||||||||| |||||| ||||| |||||||| |||||    
T  3785792 atccatgtatcctaaaagttccatcctttgatttccatgagatccaccaaacttactcaacaaatgggtca 3785722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 275 - 397
Target Start/End: Original strand, 9927817 - 9927939
Alignment:
Q  275 gtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtca 374  Q
    ||||||||||||||||||||||||||   ||||||||||| |||||||| || ||||||||||||||||||||  ||||||||||||||||||| |||||    
T  9927817 gtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtca 9927916  T
Q  375 cattttcccaaaatcgtgtcacg 397  Q
    |||||||||||||||||||||||    
T  9927917 cattttcccaaaatcgtgtcacg 9927939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 219 - 397
Target Start/End: Complemental strand, 41639215 - 41639037
Alignment:
Q  219 ttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacc 318  Q
    ||||||||||||| ||||||  | ||| ||   ||||||||||||| | ||||||||||||| | |||||||||||||||||  |||| ||||||| |||    
T  41639215 ttacccaacaaatgggtcatgaagtgcttacatagtgttcagatccagacaaaatcgtgtcatggtttcccaaatcgtgacacagttgatgcgtacgacc 41639116  T
Q  319 caaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||||||| ||||||||||||||||||||| | ||| ||||  ||||||| |||||| |||| ||||||||||||||||    
T  41639115 caaggtacgaccaaccttatcctgaaaacgtgcccaacaagttgaaaatcgtgtcacgtttttccaaaatcgtgtcacg 41639037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 10072065 - 10071968
Alignment:
Q  74 caccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatcta 171  Q
    |||||||| ||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10072065 caccaacccttttcacaagagccccctcttttagttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatcta 10071968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 37740445 - 37740320
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||||||||||||||||   |||||| |||| ||||||||||| ||||||||||||||||||||  | || |||||||||||||    
T  37740445 caaaatcgtgtcacgttttcccaaatcgtgacacatttggtgtgtacgacccaaggtacgaccaaccttatcctgaaaacttgccctgcaagccgaaaat 37740346  T
Q  368 cttgtcacattttcccaaaatcgtgt 393  Q
    | |||||| |||||||||||||||||    
T  37740345 catgtcacgttttcccaaaatcgtgt 37740320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 26699814 - 26699978
Alignment:
Q  68 aaaaggcaccaacctttttcccaagagccccct-cttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 166  Q
    |||||||||||||| |||| |||||| |||||| | ||||| | || | |||||||||||||||| ||||||||||| ||||||| | ||||||||||||    
T  26699814 aaaaggcaccaaccctttttccaagatcccccttcatttggctctctaagattcacatcttgaagttttgaacctcaaccaaagatcttcaacctttagt 26699913  T
Q  167 atctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 231  Q
    ||||| || ||||| ||||| |||| ||||||||||||||||||||| |||||| | ||||||||    
T  26699914 atctaaatgccctacaagttccctcatttggtttccatgagattcacaaagcttgctcaacaaat 26699978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 36314945 - 36314816
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  36314945 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 36314846  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||| ||||    
T  36314845 cgtgtcacgttttcccaaaatcgtgacacg 36314816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 36329154 - 36329025
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  36329154 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 36329055  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||| ||||    
T  36329054 cgtgtcacgttttcccaaaatcgtgacacg 36329025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 35369824 - 35369971
Alignment:
Q  86 tcccaagagccccctctttt-ggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaag 184  Q
    |||||||| ||||||||||| |||| |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||| |     ||||||    
T  35369824 tcccaagaaccccctcttttaggttctccaagattcacatcttaaatctttgaacctcacccaaagaccctcaacctttagtatctaaa-----taaaag 35369918  T
Q  185 tttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 237  Q
    || ||||||||  ||||||||||||||| ||||||||| ||||| || |||||    
T  35369919 ttccctcctttaatttccatgagattcatcaagcttactcaacagatgggtca 35369971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 33089741 - 33089582
Alignment:
Q  27 gactctccactcatgtgtttccc-atcctatgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||  | | || |||||||| || ||||||| |||||||| | | |||||||||||||||||||| || |||| |||||||||    
T  33089741 gactctccactcatgtgtttttcgaccccatgaatctctctccaaaagacaccaaccctct-cccaagagccccctcttttgattctccaagattcacat 33089643  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtt 186  Q
    ||| || ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  33089642 cttcaaactttgaacctcacccaaagaccctcaatctttagtatctaaata-cctaaaagtt 33089582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 47514885 - 47515023
Alignment:
Q  84 tttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaa 183  Q
    ||||||||||| || |||||||||||  ||| |||||| ||||||||||||||||| |||||| |||||| |||||||||||| | ||  ||||||||||    
T  47514885 tttcccaagagtccactcttttggttcaccaagattcatatcttgaagctttgaacttcacccgaagaccttcaacctttagtgtttaagtaccctaaaa 47514984  T
Q  184 gtttcctcctttggtttccatgagattcaccaagcttac 222  Q
    |||  ||| |||||||||||||||||||  |||||||||    
T  47514985 gttcactcatttggtttccatgagattccacaagcttac 47515023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 5429499 - 5429370
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||| ||||||||| |||||||||   ||||||||||| ||||||||||| ||||| |||| |||||||||  ||||| ||||| ||||||    
T  5429499 caaaatcgtgtcatgttttcccacatcgtgacacgattggtgcgtacgacccaaggtacgaccaatcttaacctgaaaacttgtccaacaagctgaaaat 5429400  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | | |||| |||||||||||||||||||||    
T  5429399 cgtatcacgttttcccaaaatcgtgtcacg 5429370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 54200255 - 54200362
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||| ||||||||||||||||| |  ||||||||||| ||||||||||| |||||||||||| |||||||  | ||||||||||||||||    
T  54200255 caaaatcgtgtcacattttcccaaatcgtgactagtttggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacttgcccagcaagccgaaaat 54200354  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  54200355 cgtgtcac 54200362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 8689211 - 8689082
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    ||||||||||||||||||||| |||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  8689211 caaaatcgtgtcacgttttcc-aaatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 8689113  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||||||||    
T  8689112 tcgtgtcacgttttcccaaaatcgtgtcacg 8689082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 237
Target Start/End: Original strand, 25723604 - 25723752
Alignment:
Q  88 ccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcac-ccaaagaccctcaacctttagtatctacataccctaaaagtt 186  Q
    |||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| | |||||||  |||||| ||||||||  |  |||||||| ||||    
T  25723604 ccaagagctccctcttttggttctccaagattcacattttgaagctttgaacctccctccaaaga--ctcaacatttagtattgaagtaccctaagagtt 25723701  T
Q  187 tcctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 237  Q
      ||| |||||||||||||| |||||||||||||||  ||||||| |||||    
T  25723702 cactcatttggtttccatgaaattcaccaagcttacttaacaaataggtca 25723752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 25861748 - 25861618
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  |||||||||||||   ||| ||||||| ||||||||||| ||||||||||||||||||||  | ||||||||  ||||||    
T  25861748 caaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagcaagttgaaaat 25861649  T
Q  368 cttgtcac-attttcccaaaatcgtgtcacg 397  Q
    | ||||||  |||||||||||||||| ||||    
T  25861648 cgtgtcacgtttttcccaaaatcgtgacacg 25861618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 269 - 397
Target Start/End: Complemental strand, 5268914 - 5268785
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 367  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||| ||||   ||||||    
T  5268914 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaat 5268815  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||| ||||    
T  5268814 cgtgtcacgttttcccaaaatcgtgacacg 5268785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 54867561 - 54867690
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| | ||||||||| |||||||||||||  |||||| | ||||||||  ||||||    
T  54867561 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggtacgaccaaccttatccgaaaaacgtgcccagcaagttgaaaat 54867660  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||| ||| ||||    
T  54867661 cgtgtcacgttttcccaaaattgtgacacg 54867690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 269 - 397
Target Start/End: Original strand, 5143644 - 5143772
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 367  Q
    |||||||||||||||||||| |||||||||||   |||||||| |||||||||||| | |||||||||||||||||||||   ||| ||||   ||||||    
T  5143644 aaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgcacaacccaaggtgcgaccaaccttatcctgaaaacgtacccaacaagtttgaaaat 5143742  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||||||||| |||||||||| ||||    
T  5143743 cgtgtcacattttcacaaaatcgtgccacg 5143772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 6743130 - 6743001
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||| |||||| |||||||||||||||||||   || ||||||||  |||||||||| ||||||||||||||||||||| | ||| ||||   |||||    
T  6743130 caaaattgtgtcaagttttcccaaatcgtgacacgattagtgcgtacgtcccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagtttaaaat 6743031  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| ||||||||||| |||| ||||    
T  6743030 cgtgtcacgttttcccaaaaacgtgccacg 6743001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 290 - 397
Target Start/End: Original strand, 12745787 - 12745895
Alignment:
Q  290 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaat 388  Q
    |||||||||||   |||| |||||| ||||||||||| ||||||||||||||| |||||  | ||||||||||||||||| |||||| ||||||||||||    
T  12745787 aaatcgtgacacgattggcgcgtacgacccaaggtacgaccaaccttatcctggaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaat 12745886  T
Q  389 cgtgtcacg 397  Q
    | |||||||    
T  12745887 catgtcacg 12745895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 16623008 - 16622931
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||    
T  16623008 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16622931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 35661985 - 35661911
Alignment:
Q  323 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||| ||||||||||||||||||||| | ||| ||||||||||||| || |||||||||||||||||||||||||    
T  35661985 gtacgaccaaccttatcctgaaaacgtgcccaacaagccgaaaatcgtgacacattttcccaaaatcgtgtcacg 35661911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 8653200 - 8653111
Alignment:
Q  383 caaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttc 472  Q
    ||||||||||||||||||| ||| |||  |||| ||||||||| ||||||||||| ||||||||| || |||||| ||||||||||||||    
T  8653200 caaaatcgtgtcacgttttaccttcagatccaaacatgcattcgacatcagaaattgtgacacggttgccaaatcatgtcacgattcttc 8653111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 8665007 - 8664918
Alignment:
Q  383 caaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttc 472  Q
    ||||||||||||||||||| ||| |||  |||| ||||||||| ||||||||||| ||||||||| || |||||| ||||||||||||||    
T  8665007 caaaatcgtgtcacgttttaccttcagatccaaacatgcattcgacatcagaaattgtgacacggttgccaaatcatgtcacgattcttc 8664918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 32091323 - 32091222
Alignment:
Q  116 gattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtat-ctacataccctaaaagtttcctcctttggtttccatgagattcacc 214  Q
    |||||||||||||||| |||||||||||| |||||||||||||| |||||||| | | ||||| ||||| || |||| ||| |||||||||| |||||||    
T  32091323 gattcacatcttgaagttttgaacctcactcaaagaccctcaacatttagtatccaaaataccttaaaaattccctcttttagtttccatgaaattcacc 32091224  T
Q  215 aa 216  Q
    ||    
T  32091223 aa 32091222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 445
Target Start/End: Complemental strand, 10071477 - 10071403
Alignment:
Q  370 tgtcacattttcccaaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacac 445  Q
    ||||||||||||| |||||||||| |||||||| |||||| ||||| |||||||||| ||||||||||||||||||    
T  10071477 tgtcacattttcc-aaaatcgtgttacgttttgtctccagaaccaaacatgcattcagcatcagaaatcgtgacac 10071403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 397
Target Start/End: Original strand, 5148064 - 5148189
Alignment:
Q  272 atcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatctt 370  Q
    ||||||||||||||| | |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||  ||||| |||   ||||||| |    
T  5148064 atcgtgtcacgttttgc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtatccagtaagtttgaaaatcgt 5148162  T
Q  371 gtcacattttcccaaaatcgtgtcacg 397  Q
    ||||  ||||| |||||||||| ||||    
T  5148163 gtcaagttttcacaaaatcgtgccacg 5148189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 16628587 - 16628510
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||| ||||||    
T  16628587 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcatgaaaa 16628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 397
Target Start/End: Original strand, 52095757 - 52095839
Alignment:
Q  316 acccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||| |||||| |||||||||||||||||||||    
T  52095757 acccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 52095839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 46570133 - 46570222
Alignment:
Q  308 tgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||| |||||| |||| |||||||||||||||||||   | ||||||||||||||||  |||||| ||||||||||||| |||||||    
T  46570133 tgcgtacgacccaaagtacgaccaaccttatcctgaaaatttgcccagcaagccgaaaattgtgtcacgttttcccaaaatcttgtcacg 46570222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 29254313 - 29254206
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| | ||||  ||| ||||||||||| ||||| ||  | ||| ||||||||||||    
T  29254313 caaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgatccaaaatacgaccaaccttattctgaatacttgcccaacaagccgaaaat 29254214  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  29254213 catgtcac 29254206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 282 - 397
Target Start/End: Complemental strand, 36994365 - 36994250
Alignment:
Q  282 gttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttc 381  Q
    ||||| |||||||||||||  |||||||||||| ||| ||||||| | ||||||||||  ||||||| | | ||||||||||||||  || ||| |||||    
T  36994365 gttttgccaaatcgtgacacggttggtgcgtacgacctaaggtacgatcaaccttatctagaaaacgtgcctagcaagccgaaaattgtgacacgttttc 36994266  T
Q  382 ccaaaatcgtgtcacg 397  Q
    | ||||| ||||||||    
T  36994265 caaaaattgtgtcacg 36994250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 26176028 - 26176102
Alignment:
Q  323 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||| ||||||||||||||||||||  | ||| ||||||||||||| |||||| |||||||||||| ||||||||    
T  26176028 gtacgaccaaccttatcctgaaaacttgcccatcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacg 26176102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 22629290 - 22629399
Alignment:
Q  102 ttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttc 201  Q
    |||||||| |||| |||||||||||||||  ||| || |||||||| |||| || |||||||||| |||| ||  ||||||||||  ||| |||||||||    
T  22629290 ttttggttctccaagattcacatcttgaacttttaaatctcacccagagacactgaacctttagtttctaaatttcctaaaagttcactcatttggtttc 22629389  T
Q  202 catgagattc 211  Q
     |||||||||    
T  22629390 tatgagattc 22629399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 41961252 - 41961110
Alignment:
Q  24 atagactctccactcatgtgtttcccatcctatgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcac 122  Q
    |||||||||||  | |||||||||||| || |||||||| ||||||||| ||||| ||| || |||| |||||||||| ||| |||| | || |||||||    
T  41961252 atagactctcctttaatgtgtttcccaacccatgaatctctccccaaaaagcaccgacc-ttctccctagagccccctttttcggttctacaagattcac 41961154  T
Q  123 atcttgaagctttgaacctca-cccaaagaccctcaacctttag 165  Q
    || | ||  ||||||| |||| |||||||||||||| |||||||    
T  41961153 atttggacactttgaatctcaccccaaagaccctcaccctttag 41961110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 56179028 - 56179103
Alignment:
Q  323 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||| ||||||||||||||||||| |  | |||||||||| |||||| |||||| |||||||||||||||||||||    
T  56179028 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcatgtcacgttttcccaaaatcgtgtcacg 56179103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 402
Target Start/End: Complemental strand, 3909915 - 3909782
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||| ||||||||||||  |||||||||||  |||| ||||||| || |||||||| ||||||||||| || |||||| | | | || ||| |||||    
T  3909915 caaaatcatgtcacgttttctaaaatcgtgacacggttgatgcgtacgactcaaggtacgaccaaccttat-cttaaaacgtgccaaacatgccaaaaat 3909817  T
Q  368 cttgtcacattttcccaaaatcgtgtcacgttttg 402  Q
      |||||  |||||| |||||||||||||| ||||    
T  3909816 agtgtcatgttttccaaaaatcgtgtcacgatttg 3909782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 6719370 - 6719289
Alignment:
Q  84 tttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttag 165  Q
    ||||||||||  || ||||||| ||| |||| ||||||||||||||| ||||||| ||||||| || ||| |||||||||||    
T  6719370 tttcccaagaatccactcttttagttttccaagattcacatcttgaacctttgaatctcaccctaaaaccttcaacctttag 6719289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 34112454 - 34112314
Alignment:
Q  27 gactctccactcatgtgtttcccatccta-tgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    |||||||||||||||||||| ||| ||   |||| || ||||||||||||||||||| |||||  ||||||| | ||||| ||||||||| ||||||||     
T  34112454 gactctccactcatgtgttttccaaccccgtgaacctctccccaaaaggcaccaacccttttct-aagagcctcgtctttaggttatccaagattcacaa 34112356  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagt 166  Q
     | ||   |||||| ||||| ||||||||||||| |||||||    
T  34112355 ttggacattttgaatctcacacaaagaccctcaatctttagt 34112314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 3777966 - 3778060
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagc-aagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||   | ||| ||   ||||||| |||||| |||||||||||||||| ||||    
T  3777966 ttggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacgtaccgagcaaatttgaaaatcgtgtcacgttttcccaaaatcgtgacacg 3778060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 52083007 - 52083084
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||||||||||||| ||||||||||| ||   ||| ||| ||| ||||||||||  |||||||||||||||||||    
T  52083007 aaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaa 52083084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 52094014 - 52094091
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||||||||||||| ||||||||||| ||   ||| ||| ||| ||||||||||  |||||||||||||||||||    
T  52094014 aaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaa 52094091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 5370479 - 5370554
Alignment:
Q  323 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||| ||||||||||||||||||  |  | |||||||||| |||||| ||||||  ||||||||||||||||||||    
T  5370479 gtacgaccaaccttatcctgaaagtcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 5370554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 5396370 - 5396327
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||    
T  5396370 ttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaac 5396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 396
Target Start/End: Complemental strand, 24968888 - 24968801
Alignment:
Q  309 gcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 396  Q
    |||||| |||||| |||| ||||||||||||||||||||| ||| |||| ||  || ||| ||||||  || | ||||||||||||||    
T  24968888 gcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgtcaagcatgctaaatatcgtgtcacgattgcacaaaatcgtgtcac 24968801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 479
Target Start/End: Complemental strand, 26363701 - 26363656
Alignment:
Q  434 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 479  Q
    ||||||||||| || || ||||||||||||||||||||| ||||||    
T  26363701 aaatcgtgacatggttgccaaatcgtgtcacgattcttcactttct 26363656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 394
Target Start/End: Original strand, 12739942 - 12740014
Alignment:
Q  323 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtc 394  Q
    |||| ||||||||||||||||||| |  | |||||||||| |||||  ||| || ||||||||||||||||||    
T  12739942 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtc 12740014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 394
Target Start/End: Original strand, 12748148 - 12748220
Alignment:
Q  323 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtc 394  Q
    |||| ||||||||||||||||||| |  | |||||||||| |||||  ||| || ||||||||||||||||||    
T  12748148 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtc 12748220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 26 - 348
Target Start/End: Complemental strand, 7171 - 6848
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||    
T  7171 agactctccactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaacccttttcacaagagccccctcttttggttctccaagattcacat 7072  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7071 cttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagcttaccc 6973  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcc-caaatcgtgacaatgttggtgcgtacaacccaagg 323  Q
    ||||||| ||||| |||||||||||  |||||||| ||||| |||||||||| ||||||||||| ||||||||||||  |||||||||||| ||||||||    
T  6972 aacaaatgggtcaaagaatgcatataaagtgttcatatccgagcaaaatcgtatcacgttttccacaaatcgtgacatggttggtgcgtacgacccaagg 6873  T
Q  324 tacaaccaaccttatcctgaaaacg 348  Q
    |||||||||||||||||||||||||    
T  6872 tacaaccaaccttatcctgaaaacg 6848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 26 - 397
Target Start/End: Complemental strand, 54593548 - 54593176
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  54593548 agactctccactcatgtgttttccatccccatgaatcttccccaaaaggtaccaacccttttcccaagagccccctcttttggttctccaagattcacat 54593449  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |     
T  54593448 cttgaagctttgaacctcacccaaggaccctcaacctttagtatctacataccctaaaagttccctcctttggtttccatgagattcaccaagcttttcg 54593349  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| |||||| || ||| ||   ||||||||||| ||||||||||||||||| | |||||||||||||||||   ||||||||||| |||||| ||    
T  54593348 aacaaatgggtcatggagtgcttacatagtgttcagattcgggcaaaatcgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgt 54593249  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || ||||||||||||||||||||| | ||||||||  ||||||| |||||| |||||||||||| | ||||||    
T  54593248 acgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaattgagtcacg 54593176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 27 - 397
Target Start/End: Complemental strand, 36018693 - 36018334
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    ||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||| |||| ||||||||||    
T  36018693 gactctccattcatgtgtttcccatccccatggatcttccccaaaaggcaccaacccttttcccaaaagctccctcttttggttctccaagattcacatc 36018594  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| |||    
T  36018593 ttgaagctttgaacctcatccaaagaccctcaacctttagtatctacataccctgaaagttctctcctttggtttccatgagattcaccaagcttatcca 36018494  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||            |||    
T  36018493 acaaatgggtcaaagaatgcatatgtagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacatggttggtgc------------gta 36018406  T
Q  326 caaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||||||||||| |||||| | ||||||||||||||||  |||||| |||||||||||||||||||||    
T  36018405 cgaccaaccttatcctaaaaacgtgcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacg 36018334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 27 - 397
Target Start/End: Original strand, 43404059 - 43404429
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  43404059 gactctccactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacatc 43404158  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  43404159 ttgaaactttgaacctcacccaaagaccctcaacttttagtatctaaa-accctaaaagttccctcatttggtttccatgagattcaccaagctcaccca 43404257  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    |||||| ||||| ||||| |||||   ||||||||||||||  |||||||||||||| |||||||||||||||||   ||||||||||| ||||||||||    
T  43404258 acaaatgggtcaaagaatacatatattgtgttcagatccggagaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggta 43404357  T
Q  326 caaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||| ||||||||||||||||  |  |||||||||||||||| |||||| ||| |||||||||||||||||    
T  43404358 cgaccgaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacg 43404429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 26 - 397
Target Start/End: Complemental strand, 4569794 - 4569423
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||| ||||||   || |||||||||||||||||||||||| || |||| |||| ||||    
T  4569794 agactctccactcatgtgtttcccaaccccatgaatcttccccaataggcacacccccttttcccaagagccccctcttttgattctccaagatttacat 4569695  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  4569694 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttactc 4569596  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| ||||||| |||    |||||| ||||| ||||||||||||||||||||||  || |||||||  |||||||||||| |||||||||    
T  4569595 aacaaatgggtcaaagaatgcttatattttgttcaaatccgagcaaaatcgtgtcacgttttccacaaccgtgacacggttggtgcgtacgacccaaggt 4569496  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || ||||||||||||||||||||  | ||||||||||||||||| |||||| ||||||||||||| |||||||    
T  4569495 acgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcatgtcacg 4569423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 30 - 397
Target Start/End: Original strand, 43402119 - 43402486
Alignment:
Q  30 tctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttg 128  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||    
T  43402119 tctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttctcaagagccccctcttttggttctccaagattcacatcttg 43402218  T
Q  129 aagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaaca 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  43402219 aagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccataagattcaccaagctcacccaaca 43402317  T
Q  229 aattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaa 328  Q
    |||  |||| |||||||||||    |||||||||| |  ||||||| ||||||  |||||||||||||||||   ||||||||||| ||||||| |||||    
T  43402318 aatgagtcaaagaatgcatatattatgttcagatcagaacaaaatcatgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaa 43402417  T
Q  329 ccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||||||||||||||||||  | ||||||||||||||||| |||||| |||  ||||||||||||||||    
T  43402418 ccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgtttctccaaaatcgtgtcacg 43402486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 27 - 396
Target Start/End: Original strand, 6095925 - 6096295
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||| ||||||||||    
T  6095925 gactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcaaaagagccccctcttttggttctccaagattcacatc 6096024  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  ||||| || ||||||||||||||||||||||| ||||    
T  6096025 ttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttctctcctctgatttccatgagattcaccaagctttccca 6096123  T
Q  226 ac-aaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    || |||| ||||| ||||||||||| | ||||||| |||| | ||||||||||||| | |||||||||||||||||   ||||||||||| |||||||||    
T  6096124 acaaaatgggtcaaagaatgcatatactgtgttcatatcctgacaaaatcgtgtcatgatttcccaaatcgtgacacatttggtgcgtacgacccaaggt 6096223  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 396  Q
    || |||||||||||||||||||   |||||  |||||||||||| |||||| ||||||||||||||||||||    
T  6096224 acgaccaaccttatcctgaaaatttgtccaataagccgaaaatcgtgtcacgttttcccaaaatcgtgtcac 6096295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 30 - 397
Target Start/End: Original strand, 55302294 - 55302660
Alignment:
Q  30 tctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttg 128  Q
    ||||||||||||||||| ||| ||| |||||| || ||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||    
T  55302294 tctccactcatgtgttttccaacctcatgaatttttcccaaaaggcaccaacccttttcccaagagctccctcttttggttctccaagattcacatcttg 55302393  T
Q  129 aagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaaca 228  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  55302394 aagctttgaacctcatccaaagaccctcaacttttagtatctaaa-accctaaaagtttcctcctttggtttcaatgaaattcaccaagcttacccaaca 55302492  T
Q  229 aattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaa 328  Q
    ||| |||||| || ||| ||   ||||||||||||||| |||||| |||||||| |||||||||||||||||   ||||||||||| ||||||||||| |    
T  55302493 aatgggtcatggagtgcttacatagtgttcagatccggacaaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacga 55302592  T
Q  329 ccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||||||||||||||||||  | ||||||||||||||||| | |||| ||||||| |||||||||||||    
T  55302593 ccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtatcacgttttccc-aaatcgtgtcacg 55302660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 27 - 397
Target Start/End: Complemental strand, 40913181 - 40912809
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaa-ggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    |||||||||||||||||||||||| ||  |||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  40913181 gactctccactcatgtgtttcccaaccccatgaatcttctccaaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacat 40913082  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagc-ttacc 223  Q
     |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  40913081 tttgaagctttgaacctcacccaaagaccctaaacctttagtatcta-aaaccctaaaagtcccctcctttggtttccatgagattcaccaagctttacc 40912983  T
Q  224 caacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaagg 323  Q
    |||||||| ||||| ||||||| ||   ||||||||||||||| ||||||||||||| | |||||||||||||||||   ||||||||||| | |||||     
T  40912982 caacaaatgggtcaaagaatgcttacatagtgttcagatccggacaaaatcgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgatccaaga 40912883  T
Q  324 tacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| |||| |||||||| ||||||  | ||| ||||||||||||| |||||| |||||||||||| || |||||    
T  40912882 tacgaccagccttatccagaaaacttgcccaacaagccgaaaatcgtgtcacgttttcccaaaattgtatcacg 40912809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 26 - 397
Target Start/End: Original strand, 49199796 - 49200147
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| |||| |||||||||    
T  49199796 agactctccactcatatgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcacaatagccccctcttttggttctccaagattcacat 49199895  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49199896 cttgaaactttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagcttaccc 49199994  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| |||||||||||   |||||||||||||| |||||||||| ||| |                    ||||||||||| |||||||||    
T  49199995 aacaaatgggtcaaagaatgcatatattgtgttcagatccggacaaaatcgtgacacat--------------------ttggtgcgtacgacccaaggt 49200074  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || ||||||||||||||||||||  | ||||||||||||||||| |||||| ||| ||||| |||||||||||    
T  49200075 acgaccaaccttatcctgaaaacatgcccagcaagccgaaaatcgtgtcacgtttccccaacatcgtgtcacg 49200147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 28074467 - 28074248
Alignment:
Q  18 ctctcaatagactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatg 116  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||||||||||||||||||||| |||| |    
T  28074467 ctctcaatagactctccactcatgtgtttcccatccccatgaatcttccccaaaacgcaccaac-tatttcccaagagccccctcttttggttctccaag 28074369  T
Q  117 attcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaa 216  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  28074368 attcacatcttgaaactttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagtttcctcctttggtttccatgagattcaccaa 28074270  T
Q  217 gcttacccaacaaattggtcat 238  Q
    ||||||||||||||| ||||||    
T  28074269 gcttacccaacaaatgggtcat 28074248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 46860313 - 46860120
Alignment:
Q  27 gactctccactcatgtgtttcccatcc-tatgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  46860313 gactctccactcatgtgtttcccatccctatgaatcttccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacatc 46860214  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagct 219  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  46860213 atgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagttctctcatttggtttccatgagattcaccaagct 46860120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 27 - 397
Target Start/End: Complemental strand, 34491055 - 34490704
Alignment:
Q  27 gactctccactcatgtgtttcccatc-ctatgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    ||||||||||||||||||||  || | | |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  34491055 gactctccactcatgtgtttttcaactccatgaatcttctccaaaaggcaccaacccttttcacaagagccccctcttttggttctccaagattcacatc 34490956  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||||| | ||    
T  34490955 ttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttctctcctttggtttccatgagattcaccaagctttcaca 34490857  T
Q  226 a-caaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    |  |||| ||| || || ||| |||  ||||||||||||| | |||||||||| |||||                    ||||||||||| |||||||||    
T  34490856 ataaaatgggtgatggagtgcttatatagtgttcagatccagacaaaatcgtgacacgt--------------------ttggtgcgtacgacccaaggt 34490777  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||||||||||||||||||||||  | |||  |||||||||||| |||||| |||| ||||||||||||||||    
T  34490776 acaaccaaccttatcctgaaaacttgcccaataagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacg 34490704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 28 - 230
Target Start/End: Complemental strand, 47304093 - 47303891
Alignment:
Q  28 actctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatct 126  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||    
T  47304093 actctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacatct 47303994  T
Q  127 tgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaa 226  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| | ||| ||||||||  |||||||| |||||||||||||||||||||||||||||    
T  47303993 tgaagctttgaacctcacccaaagaccttcaacatttagtatcta-aaaccataaaagttctctcctttgatttccatgagattcaccaagcttacccaa 47303895  T
Q  227 caaa 230  Q
    ||||    
T  47303894 caaa 47303891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 27 - 297
Target Start/End: Complemental strand, 30235967 - 30235696
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||| ||||||| ||| ||  |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  30235967 gactctccactcttgtgttttccaaccccatgaatattccccaaaaggcaccaacccttttcacaagagccccctcttttggttctccaagattcacatc 30235868  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  30235867 ttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttctctcctttggtttcattgagattcaccaagcttaccca 30235769  T
Q  226 ac-aaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtg 297  Q
    || |||| |||||| || ||| ||    ||| ||||||| | | ||||||||||||||||||||| ||||||||    
T  30235768 acaaaatgggtcatggagtgcttaaaatgtgtttcagat-ctgtcaaaatcgtgtcacgttttccaaaatcgtg 30235696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 30 - 220
Target Start/End: Original strand, 41819851 - 41820040
Alignment:
Q  30 tctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttg 128  Q
    ||||||||||||||||||||| ||  |||||||||||| |||||||||||||| ||||||||||||||||||||||||||| || | |||||||||||||    
T  41819851 tctccactcatgtgtttcccaaccccatgaatcttccc-aaaaggcaccaacccttttcccaagagccccctcttttggttctctaagattcacatcttg 41819949  T
Q  129 aagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagctt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||  ||||||||||||||||||||||||||||||||    
T  41819950 aagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaacctaaaagttatctcctttggtttccatgagattcaccaagctt 41820040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 160 - 397
Target Start/End: Original strand, 31340501 - 31340739
Alignment:
Q  160 ctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttca 259  Q
    |||||||||||| | ||||||||||||  |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||   |||||||    
T  31340501 ctttagtatctaaa-accctaaaagttctctcctttggtttccataagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattgtgttca 31340599  T
Q  260 gatccgggcaaaatcgtgtcacgttttccc-aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaa 358  Q
    |||| || ||||||| ||||||| |||||| |||||||| ||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||| |||    
T  31340600 gatctggacaaaatcatgtcacgatttcccaaaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccaacaa 31340699  T
Q  359 gccgaaaatcttgtca-cattttcccaaaatcgtgtcacg 397  Q
    |||||||||| |||||   ||||||||||||| |||||||    
T  31340700 gccgaaaatcgtgtcatgtttttcccaaaatcatgtcacg 31340739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 26 - 231
Target Start/End: Original strand, 5434202 - 5434409
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcaca 123  Q
    ||||||||||||||||||||||| | ||  |||||||| |||| ||||  ||| |||| ||||||||||||||||||||||||||| |  | |||| |||    
T  5434202 agactctccactcatgtgtttcctaaccccatgaatctctccctaaaaaacactaacccttttcccaagagccccctcttttggttctataagatttaca 5434301  T
Q  124 tcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacc 223  Q
    |||||||||||| |||||| | |||||||||| ||| ||| ||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||||     
T  5434302 tcttgaagctttaaacctccctcaaagacccttaacttttggtatctaaatatcctaaaagttccctcctttgatttccatgagattcaccaagcttact 5434401  T
Q  224 caacaaat 231  Q
    ||||||||    
T  5434402 caacaaat 5434409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 26323896 - 26324042
Alignment:
Q  84 tttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaa 183  Q
    |||||||| ||||| |||||||| || | || |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| | |||||    
T  26323896 tttcccaatagccctctcttttgattcttcaagatttacatcttgaagctttgaacttcacccaatgaccctcaacctttagtatctaaatatcttaaaa 26323995  T
Q  184 gtttcctcctttggtttccatgagattcaccaagcttacccaacaaa 230  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  26323996 gtttcctcctttggtttccatgagattcaccaaacttactcaacaaa 26324042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 34795652 - 34795456
Alignment:
Q  86 tcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagt 185  Q
    |||| ||| ||||||||| ||||| |||| |||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||     
T  34795652 tccctagaaccccctcttctggttctccaagattcagatcttgaagctttgaacatcacccaacgaccatcaacctttagtatctaaataccctaaaaga 34795553  T
Q  186 ttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacg 282  Q
    |  |||||||||||| |||  |||||||||| ||||||||||||||  |||||||| ||| |||  | |||||| || | |||||||||||||||||    
T  34795552 tctctcctttggttttcataggattcaccaaacttacccaacaaataagtcatagagtgcttatatactgttcaaattcaggcaaaatcgtgtcacg 34795456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 29812882 - 29812753
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | |||||||| | |||||    
T  29812882 caaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagacaaaaat 29812783  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||||||||    
T  29812782 cgtgtcacgttttcccaaaatcgtgtcacg 29812753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 5236806 - 5236935
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| ||||||||||| ||||| ||||||||||||||    ||||||||||||||||    
T  5236806 caaaatcgtgtcacgttttgccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcctgaaaactttcccagcaagccgaaaat 5236905  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||| ||||||||    
T  5236906 cgtgtcacgttttcccaaaattgtgtcacg 5236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 39 - 231
Target Start/End: Complemental strand, 39127389 - 39127197
Alignment:
Q  39 atgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttg 136  Q
    |||||||||||| ||| |||||||| |||| |||||||||||||  | |||| ||||| ||||| |||| ||| || | |||||| ||||||||||||||    
T  39127389 atgtgtttcccaacctcatgaatctctcccaaaaaggcaccaactctcttcc-aagagtcccctattttagttctctaagattcatatcttgaagctttg 39127291  T
Q  137 aacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 231  Q
    ||||||||| |||| |||  |||||||||||| || ||||||||||||||  |||| ||| |||||||||||||||| |||||||| ||||||||    
T  39127290 aacctcacc-aaaggccccaaacctttagtatgtaaataccctaaaagttctctccgttgatttccatgagattcactaagcttactcaacaaat 39127197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 40592486 - 40592357
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  |||||||||||||   |||||| |||| | ||||||||| ||||||||||||||||||||| ||||||||||  ||||||    
T  40592486 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgtgtccagcaagttgaaaat 40592387  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||| ||||    
T  40592386 cgtgtcacgttttcccaaaatcgtgacacg 40592357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 29810687 - 29810558
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||   |||||||||||| |||||    
T  29810687 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccagcaagccaaaaat 29810588  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
      ||  || |||| | ||||||||||||||    
T  29810587 tgtgctacgtttttctaaaatcgtgtcacg 29810558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 363 - 472
Target Start/End: Complemental strand, 30235724 - 30235616
Alignment:
Q  363 aaaatcttgtcacattttcccaaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtc 462  Q
    |||||| |||||| |||||| |||||||||||||||||||||| ||| ||||| |||||||||  |||||||||||||||||||| || |||||||||||    
T  30235724 aaaatcgtgtcacgttttcc-aaaatcgtgtcacgttttgccttcagaaccaaacatgcattcggcatcagaaatcgtgacacggttgccaaatcgtgtc 30235626  T
Q  463 acgattcttc 472  Q
    ||||||||||    
T  30235625 acgattcttc 30235616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 35139134 - 35139250
Alignment:
Q  121 acatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagctt 220  Q
    ||||||| ||| ||||||||||| | ||||||||||||| ||||||||||| |||||| ||||||  ||||||||||||||||||| |||||||||||||    
T  35139134 acatcttaaagttttgaacctcatctaaagaccctcaacgtttagtatctaaatacccaaaaagtaccctcctttggtttccatgaaattcaccaagctt 35139233  T
Q  221 acccaacaaattggtca 237  Q
    ||  ||||||| |||||    
T  35139234 acttaacaaatgggtca 35139250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 8127012 - 8127141
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  |||||||||||||  ||||||| |||| ||||||| ||| |||||||||||||||||||||   | ||||||  ||||||    
T  8127012 caaaatcgtgtcacgtttgtccaaatcgtgacacggttggtgtgtacgacccaagatacgaccaaccttatcctgaaaacgtacctagcaagttgaaaat 8127111  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||| ||||||||||||||| ||||    
T  8127112 cgtgtcacactttcccaaaatcgtgacacg 8127141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 44331352 - 44331259
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||   |||||||||| |||||| |||||| |||||||||||||||||||||    
T  44331352 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagccaaaaatcgtgtcactttttcccaaaatcgtgtcacg 44331259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 268 - 392
Target Start/End: Complemental strand, 1736008 - 1735884
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||||||||||||||| |||||||||||||| |||| | |||   ||||  ||||||    
T  1736008 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaatgtgtcattcaagttgaaaat 1735909  T
Q  368 cttgtcacattttcccaaaatcgtg 392  Q
    | |||||| ||||||||||||||||    
T  1735908 cgtgtcacgttttcccaaaatcgtg 1735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 24694870 - 24694779
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag 359  Q
    ||||||||||| ||||||  |||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  24694870 caaaatcgtgttacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgtccagcaag 24694779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 8370193 - 8370064
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaa-gccgaaaa 366  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||| |||||||||||||| ||||||   |||||||    |||||    
T  8370193 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaacgttcccagcaattttgaaaa 8370095  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||| ||||    
T  8370094 tcgtgtcacgttttcccaaaatcgtgacacg 8370064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 46173318 - 46173206
Alignment:
Q  284 tttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttccc 383  Q
    |||||||| ||||||||  |||||||||||| ||||||||||| ||||||||||||||||||||| | ||| |||||||  |||| |||||  |||||||    
T  46173318 tttcccaattcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagccg-gaatcgtgtcatgttttccc 46173220  T
Q  384 aaaatcgtgtcacg 397  Q
    ||||||||||||||    
T  46173219 aaaatcgtgtcacg 46173206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 40845037 - 40845157
Alignment:
Q  270 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcct-gaaaacgggtccagcaagccgaaaatc 368  Q
    |||| |||||||||||  |||||||||||||   ||||||||||||||||||||||| ||||||||||||||  |||||| |||||||| |  |||||||    
T  40845037 aaattgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaaacgtgtccagcacgttgaaaatc 40845136  T
Q  369 ttgtcacattttcccaaaatc 389  Q
     |||||| |||||||||||||    
T  40845137 gtgtcacgttttcccaaaatc 40845157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 269 - 397
Target Start/End: Original strand, 48438598 - 48438727
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 367  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| | |||||||||||||||||||||||||||||||   ||| ||||   ||||||    
T  48438598 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggtacaaccaaccttatcctgaaaacgtacccatcaagtttgaaaat 48438697  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| ||| |||||||||||| ||||    
T  48438698 cgtgtcacgtttccccaaaatcgtgacacg 48438727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 16264731 - 16264860
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    ||||||||||||||| ||||| |||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||| ||   |||||    
T  16264731 caaaatcgtgtcacgctttcc-aaatcgtggcacgattggtgcgtaccacccaaggtacgaccaaccttatcctgaaaacgtacccagctagtttgaaaa 16264829  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||| ||||    
T  16264830 tcgtgtcacgttttcccaaaatcgtgacacg 16264860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 36029475 - 36029605
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    |||||| |||||||||||| | ||| |||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  36029475 caaaattgtgtcacgtttttctaaaccgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 36029574  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||| ||||||||||| ||||    
T  36029575 tcgtgtcacgtttttccaaaatcgtgacacg 36029605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 36796154 - 36796064
Alignment:
Q  121 acatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattc 211  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||| ||||  | |||||||||||  |||||||| ||||||||||||||    
T  36796154 acatcttgaagctttgaacctcatctaaagaccttcaacctttagtttctaagttccctaaaagttatctcctttgatttccatgagattc 36796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 39032259 - 39032130
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    ||||||||||||||| ||| | |||||||| ||   ||||||||||| ||||||||||| |||||| ||||||||||||||   ||||||||   |||||    
T  39032259 caaaatcgtgtcacgattttc-aaatcgtggcacgattggtgcgtacgacccaaggtacgaccaactttatcctgaaaacgtacccagcaagtttgaaaa 39032161  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || ||||||||||||||||||||||| ||||    
T  39032160 tcgtgtcacattttcccaaaatcgtgacacg 39032130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 47923608 - 47923530
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||||||||||||||  |||||||||||||   ||| ||||||||||||||||||| |||||||||||||||||||    
T  47923608 caaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacaacccaaggtacgaccaaccttatcctgaaaa 47923530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 7762082 - 7761954
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||    
T  7762082 aaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaat 7761983  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||  ||||||||||||||||||||    
T  7761982 cgtgtcac-gtttcccaaaatcgtgtcacg 7761954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 44331796 - 44331925
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||| || ||||||| ||||||||||||||   |||||| |||| ||||||||||| || ||| ||||| ||||||||   |||| ||||| |||||    
T  44331796 caaaatcatgccacgtttccccaaatcgtgacacatttggtgtgtacgacccaaggtacgactaactttatcttgaaaacgtacccaggaagccaaaaat 44331895  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||| ||||||||||||||||    
T  44331896 cgtgtcacgtttttccaaaatcgtgtcacg 44331925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 30709501 - 30709423
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| ||||||||||  ||||| |||||||||||||    
T  30709501 caaaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgacccaaggtaagaccaatcttatcctgaaaa 30709423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 7764270 - 7764141
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||| |||| || ||   ||| ||||||| ||||||||||| |||||||||||||| |||| |  | ||| |||||| |||||    
T  7764270 aaatcgtgtcacgtttttccccaatcatgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaat 7764171  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||||||||    
T  7764170 cgtgtcacgttttcccaaaatcgtgtcacg 7764141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 5258492 - 5258623
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    ||||||||||||||||||| ||| ||||||| ||   | | ||||||| |  |||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  5258492 caaaatcgtgtcacgtttttccccaatcgtgccacaatcgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 5258591  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| ||||||  ||||||||||||||||||||    
T  5258592 atcgtgtcacgatttcccaaaatcgtgtcacg 5258623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 9636476 - 9636607
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  ||||| |||||| |||    
T  9636476 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgtccatcaagccaaaa 9636575  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| |||||   |||||||||||| |||||||    
T  9636576 atcgtgtcatgatttcccaaaatcatgtcacg 9636607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 27027088 - 27027218
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaag-ccgaaa 365  Q
    ||||||||||||||||||||| ||| |||| ||   ||||||||||| ||||||||||| ||||||||||||||| |||| |   ||||||||   ||||    
T  27027088 caaaatcgtgtcacgttttccaaaa-cgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagcaagtttgaaa 27027186  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| |||||| |||||||||||||||| ||||    
T  27027187 atcgtgtcacgttttcccaaaatcgtgacacg 27027218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 31340448 - 31340503
Alignment:
Q  72 ggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatctt 127  Q
    |||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||    
T  31340448 ggcaccaaccattttcccaagagccccctcttttggttctccaagattcacatctt 31340503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 40735248 - 40735117
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaag-ccgaaa 365  Q
    ||||||||||||||||||  ||||||| | |||   ||||||||||| ||||||||||| ||||||||||||||| |||| |   ||||||||   ||||    
T  40735248 caaaatcgtgtcacgtttgtccaaatcataacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagcaagtttgaaa 40735149  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| |||||| |||||||||||||||| ||||    
T  40735148 atcgtgtcacgttttcccaaaatcgtgacacg 40735117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 472
Target Start/End: Complemental strand, 47303850 - 47303763
Alignment:
Q  385 aaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttc 472  Q
    ||||| ||||||||||||||| ||| ||| | |||||||||  ||||| |||||||| ||||| || |||||||||||||||||||||    
T  47303850 aaatcatgtcacgttttgccttcagaaccgaacatgcattcggcatcaaaaatcgtgtcacggttgccaaatcgtgtcacgattcttc 47303763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 23410681 - 23410759
Alignment:
Q  270 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 348  Q
    |||| |||||||||||| |||||||||||||  ||||||| | |||||||||||||| ||||| |||||| ||||||||    
T  23410681 aaattgtgtcacgttttgccaaatcgtgacacggttggtgtgaacaacccaaggtacgaccaaacttatcttgaaaacg 23410759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 27038459 - 27038548
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtcacattttcccaaaatcgtg 392  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    ||| ||||   ||||||| |||||||||||||||||||||||    
T  27038459 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatacccaacaagtttgaaaatcgtgtcacattttcccaaaatcgtg 27038548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 1683325 - 1683185
Alignment:
Q  32 tccactcatgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttga 129  Q
    ||||||||||||||| ||| ||  |||||||| | ||||||| ||||||||| ||| || || | ||  ||||||||||| |||| ||||||||| ||||    
T  1683325 tccactcatgtgttttccaaccccatgaatctcttcccaaaatgcaccaacccttt-ccgaaaaaccttctcttttggttctccaagattcacat-ttga 1683228  T
Q  130 agc-tttgaacctcacccaaagaccctcaacctttagtatcta 171  Q
    | | |||||| ||||||||||||||||||||||||||| ||||    
T  1683227 aacatttgaatctcacccaaagaccctcaacctttagtttcta 1683185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 288 - 397
Target Start/End: Original strand, 21711603 - 21711713
Alignment:
Q  288 ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtcacattttcccaaa 386  Q
    |||||||||||||   ||||||||||| ||||||||||| ||||||||||||| |||||||    |||||||   ||||||  |||||| ||||||||||    
T  21711603 ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatccggaaaacgtactcagcaagtttgaaaattgtgtcacgttttcccaaa 21711702  T
Q  387 atcgtgtcacg 397  Q
    |||||| ||||    
T  21711703 atcgtgacacg 21711713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 40734317 - 40734239
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    |||||| |||||||||||  |||||||||||||   ||| ||||||| | ||||||||| |||||||||||||||||||    
T  40734317 caaaattgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 40734239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 45094982 - 45094853
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||| ||||||| ||   ||| |||||||   ||||||||| ||||||||||||||||||| |  | ||| |||||| |||||    
T  45094982 aaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgttccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 45094883  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||  ||||||||||| ||||||||    
T  45094882 cgtgtcacgatttcccaaaattgtgtcacg 45094853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 16498840 - 16498756
Alignment:
Q  310 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||| ||||| ||||| |||||||||||   |  |||| ||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  16498840 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacg 16498756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 345
Target Start/End: Complemental strand, 25929100 - 25929023
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaa 345  Q
    ||||||||||||||| ||  ||||||||| |||  |||||| ||||| | |||| |||| ||||||||||||||||||    
T  25929100 caaaatcgtgtcacgattggccaaatcgtaacacggttggtacgtacgatccaatgtacgaccaaccttatcctgaaa 25929023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 434 - 479
Target Start/End: Original strand, 31340775 - 31340820
Alignment:
Q  434 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 479  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||    
T  31340775 aaatcgtgacacggttgccaaatcgtgtcacgattcttcactttct 31340820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 50432937 - 50433006
Alignment:
Q  87 cccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaa 158  Q
    ||||| |||||||||||||||||  ||| ||||||| ||||||  ||||||| ||||| |||||||||||||    
T  50432937 cccaatagccccctcttttggtt--ccaagattcacctcttgaccctttgaatctcactcaaagaccctcaa 50433006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 479
Target Start/End: Complemental strand, 34490669 - 34490623
Alignment:
Q  433 gaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 479  Q
    ||||||||||||||| || |||||||||||| |||||||| ||||||    
T  34490669 gaaatcgtgacacggttgccaaatcgtgtcatgattcttcactttct 34490623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 37726058 - 37726135
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| |||||| |||| ||||||||||||||||||||    
T  37726058 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatacgtacgacccaatgtacgaccaaccttatcctgaaaac 37726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 479
Target Start/End: Complemental strand, 44331223 - 44331177
Alignment:
Q  433 gaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 479  Q
    ||||||||||||||| || |||| |||||||||||||||| ||||||    
T  44331223 gaaatcgtgacacggttgccaaagcgtgtcacgattcttcactttct 44331177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 51398633 - 51398587
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 314  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||    
T  51398633 caaaatcgtgtcacattttcccaaatcgtgacacgtttggtgcgtac 51398587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 3393341 - 3393296
Alignment:
Q  352 ccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||||||||| |||||| ||||||  ||||||||||||||||||||    
T  3393341 ccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 3393296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 37408236 - 37408199
Alignment:
Q  310 cgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  37408236 cgtacgacccaaggtacgaccaaccttatcctgaaaac 37408199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 51398590 - 51398517
Alignment:
Q  323 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 396  Q
    |||| ||||||| |||||| |||||  | ||| ||| ||||||||  |||||| ||||||||||||||||||||    
T  51398590 gtacgaccaaccatatcctaaaaacttgcccaacaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcac 51398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 27974615 - 27974579
Alignment:
Q  310 cgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  27974615 cgtacgacccaaggtacaaccaaccttatcatgaaaa 27974579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 35925908 - 35925952
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 348  Q
    |||||||||||| | ||| |||| |||||||||||||||||||||    
T  35925908 ttggtgcgtacatctcaatgtacgaccaaccttatcctgaaaacg 35925952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 26 - 397
Target Start/End: Original strand, 80608 - 80979
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||| |||||| ||    
T  80608 agactctccgctcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcataagagccccctcttttggttctccaagattcaaat 80707  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||  ||    
T  80708 cttgaagctttgaacctcacccaaagaccctcaacctctagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagattttcc 80806  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||| | ||||||| |||   |||||||||||||| ||||||||||||||| |||||||||||||||||   ||||||||||| |||||||||    
T  80807 aacaaatgggtgaaagaatgcttatattgtgttcagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggt 80906  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || ||||||||||||||||||||  | ||||||||||||||||| || ||| |||||||||||||||||||||    
T  80907 acgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgccacgttttcccaaaatcgtgtcacg 80979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 27 - 397
Target Start/End: Original strand, 37033399 - 37033765
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  37033399 gactctccactcatgtgtttcccaacctcatgaatcttcctcaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacatc 37033498  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||     | |||||||||||| ||||||||||||||||||||||||||| ||||||| ||    
T  37033499 ttgaagctttgaacctcacccaaagaccctcaacctttagta-----aaaccctaaaagttccctcctttggtttccatgagattcacccagcttactca 37033593  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    |||||  ||||| ||||||| |||   |||||||||||||| |||||| |||||||| |||||||||||||||||   ||||||||||| ||||||||||    
T  37033594 acaaaagggtcaaagaatgcttatattgtgttcagatccggacaaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggta 37033693  T
Q  326 caaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||||||||||||||  | || ||||| |||||||| |||||  ||| || ||||||||||||||    
T  37033694 caaccaaccttatcctgaaaacttgccctgcaaggcgaaaatcgtgtcatgtttcccgaaaatcgtgtcacg 37033765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 26 - 367
Target Start/End: Original strand, 13547414 - 13547754
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||| ||| ||  |||||| |||| ||||||||||| ||| ||||| ||||||| |||||||||||||||||| |||||||||    
T  13547414 agactctccactcatgtgttttccaaccccatgaattttcctcaaaaggcaccgacccttttcacaagagctccctcttttggttatccaagattcacat 13547513  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||  |||||||||||||||||||||||||||||||||||     
T  13547514 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaa-actctaaaagttctctcctttggtttccatgagattcaccaagcttacca 13547612  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| | |||||||||| |||||||||||||||| |||||||||| | |||||||||||||||||||  |||||||||||| |||||||||    
T  13547613 aacaaatgggtcaaaaaatgcatatgtagtgttcagatccgggtaaaatcgtgttatgttttcccaaatcgtgacacggttggtgcgtacgacccaaggt 13547712  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    || |||||||||||  |||||||| | ||||||||| ||||||    
T  13547713 acgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaat 13547754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 26 - 367
Target Start/End: Original strand, 13549325 - 13549665
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||| ||| ||  |||||| |||| ||||||||||| ||| ||||| ||||||| |||||||||||||||||| |||||||||    
T  13549325 agactctccactcatgtgttttccaaccccatgaattttcctcaaaaggcaccgacccttttcacaagagctccctcttttggttatccaagattcacat 13549424  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||  |||||||||||||||||||||||||||||||||||     
T  13549425 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaa-actctaaaagttctctcctttggtttccatgagattcaccaagcttacca 13549523  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| | |||||||||| |||||||||||||||| |||||||||| | |||||||||||||||||||  |||||||||||| |||||||||    
T  13549524 aacaaatgggtcaaaaaatgcatatgtagtgttcagatccgggtaaaatcgtgttatgttttcccaaatcgtgacacggttggtgcgtacgacccaaggt 13549623  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    || |||||||||||  |||||||| | ||||||||| ||||||    
T  13549624 acgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaat 13549665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 26 - 395
Target Start/End: Complemental strand, 193454 - 193086
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||| ||| ||||||||||||| ||  |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  193454 agactcttcacacatgtgtttcccaaccccatgaatcttccc-aaaaggcaccaaccttttccccaagagccccctcttttggttctccaagattcacat 193356  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    | ||||||||||||||||||| |||||||||||||||||| |||||| | ||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  193355 catgaagctttgaacctcaccgaaagaccctcaacctttaatatctaaa-accctaaaagttatctcctttggtttccatgagattcaccaagcttaccc 193257  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| ||||| | |||   |||||||||||||| ||||||||||||||| |||||||||||| ||||   ||||||||||| |||||||||    
T  193256 aacaaatgggtcaaagaatacttatattgtgttcagatccggacaaaatcgtgtcacgatttcccaaatcgcgacacgtttggtgcgtacgacccaaggt 193157  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtca 395  Q
    || ||||| |||||||| |||||  | ||||||||||||||||  | |||| |||| ||||||| ||||||    
T  193156 acgaccaatcttatcctaaaaacttgcccagcaagccgaaaatggtatcacgtttttccaaaattgtgtca 193086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 28 - 375
Target Start/End: Complemental strand, 29136088 - 29135762
Alignment:
Q  28 actctccactcatgtgtttcccatcctatgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatctt 127  Q
    ||||||||||||||| ||||| | || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||||||||    
T  29136088 actctccactcatgtttttccaaccccatgaatcttccccaaaaggcaccaacccttttcccaagagtcccctcttttggttctccaagattcacatctt 29135989  T
Q  128 gaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaac 227  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  29135988 gaagctttgaacctcactcaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagcttactcaac 29135890  T
Q  228 aaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtaca 327  Q
    |||| ||||| ||||||| |||   |||||||||||||| |||||||||| |||||                    ||||||||||| |||||||||||     
T  29135889 aaatgggtcaaagaatgcttatattgtgttcagatccggacaaaatcgtgacacgt--------------------ttggtgcgtacgacccaaggtacg 29135810  T
Q  328 accaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 375  Q
    ||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  29135809 accaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcac 29135762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 26 - 397
Target Start/End: Original strand, 37879236 - 37879587
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||    
T  37879236 agactctccactcatgtgtttcccaaccccatgaattttccccaaaaggcaccaacctttttcacaagagccccctctttttgttctccaagattcacat 37879335  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||| |||| | ||||||| |||||||||||||||||||||||||||    
T  37879336 cttgaagctttgaacctcacccaaagatcctcaacatttagtatcta-aaaccctaacagttccttcctttgatttccatgagattcaccaagcttaccc 37879434  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt 324  Q
    ||||||| ||||| |||||||||||   |||||||||||||| |||||||||| || ||                    ||||||||| | |||||||||    
T  37879435 aacaaatgggtcaaagaatgcatatattgtgttcagatccggacaaaatcgtgacatgt--------------------ttggtgcgtgcgacccaaggt 37879514  T
Q  325 acaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||||||||||| |||||  |||||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  37879515 acgaccaaccttatcctaaaaacttgtccagtaagctgaaaatcgtgtcacatttttccaaaatcgtgtcacg 37879587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 26 - 238
Target Start/End: Original strand, 47255664 - 47255871
Alignment:
Q  26 agactctccactcatgtgtttcccatcctatgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||||||||    |||||||||||||||| |||||||||| |||| ||||||||||    
T  47255664 agactctccaatcatgtgtttcccaacccatgaatcttccccaaaaggcacca----ttttcccaagagccccatcttttggttctccaagattcacatc 47255759  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47255760 ttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagcttaccca 47255858  T
Q  226 acaaattggtcat 238  Q
    |||||| ||||||    
T  47255859 acaaatgggtcat 47255871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 27 - 216
Target Start/End: Complemental strand, 28242230 - 28242041
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||     
T  28242230 gactctccactcatgtgtttcccaaccttatgaatcttccc-aaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacatt 28242132  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  28242131 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagttccctcctttggttttcatgagattcaccaa 28242041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 7482555 - 7482751
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagcccc-ctcttttggttatccatgattcaca 123  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| ||||||||    
T  7482555 agactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcccaagagcccccctcttttggttctccaagattcaca 7482654  T
Q  124 tcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagctta 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  7482655 tcttgaagctttgaacctcacccaaagaccctcaaccgttagtatcta-aaaccctaaaagtttcctcctttggtttccatgagattcaccaaactta 7482751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 19754334 - 19754122
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| |||| |||||| ||    
T  19754334 agactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcacaagagccccctctcttggttttccaagattcaaat 19754235  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    | ||  ||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19754234 catggtgctttgaacctcacccaaagacccttaacctttagtatctaga-accctaaaagttccctcctttggtttccatgagattcaccaagcttaccc 19754136  T
Q  225 aacaaattggtcat 238  Q
    ||||||| ||||||    
T  19754135 aacaaatgggtcat 19754122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 27 - 231
Target Start/End: Original strand, 42298301 - 42298505
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||  |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  42298301 gactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaacccttttcacaagagccccctcttttggttctccaagattcacatc 42298400  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||   ||| |||||||||||||||||||    
T  42298401 ttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagtttcatcctttggttgttatgggattcaccaagcttaccca 42298499  T
Q  226 acaaat 231  Q
    ||||||    
T  42298500 acaaat 42298505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 27 - 285
Target Start/End: Complemental strand, 11348540 - 11348283
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||| ||| ||  |||||||||| |||||||||||||  | ||||||||||||||||||||||||||| |||| ||||||||||    
T  11348540 gactctccactcatgtgttttccaaccccatgaatcttctccaaaaggcaccagaccttttcccaagagccccctcttttggttctccaagattcacatc 11348441  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  11348440 ttgaaactttgaacctcacccaaagaccctcaacccttagtatcta-aaaccctaaaagttccatcctttggtttccatgagattcactaagcttaccca 11348342  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttt 285  Q
    |||||| |||||| || | | |||  |||||| |||||| | |||||||||| |||||||    
T  11348341 acaaatgggtcatggagtacttatatagtgtttagatcc-gacaaaatcgtgacacgttt 11348283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 34603411 - 34603204
Alignment:
Q  34 cactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagc 132  Q
    ||||||||||||| ||| ||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  34603411 cactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaacccttttcccaagagctccctcttttggttctccaagattcacatcttgaagc 34603312  T
Q  133 tttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaatt 232  Q
    ||||||| ||||||||||||| |||||||||| |||||| | |||||||||||| |||||||||||||||||||||||||||||||||  |||||||||     
T  34603311 tttgaacatcacccaaagaccttcaacctttaatatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagcttttccaacaaatg 34603213  T
Q  233 ggtcataga 241  Q
    |||||||||    
T  34603212 ggtcataga 34603204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 37168140 - 37167948
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  37168140 agactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacat 37168041  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagc 218  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | ||  |||||||| ||||||||| |||||||||||||| ||||||    
T  37168040 cttgaagctttgaacctcacccaaaaaccctcaacctttagtatcta-aaactgtaaaagttccctcctttgatttccatgagattccccaagc 37167948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 34602672 - 34602879
Alignment:
Q  34 cactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagc 132  Q
    ||||||||||||| ||| ||  ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| |||| |||||||||||||||||    
T  34602672 cactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaacccttttaccaagagctccctcttttggttctccaagattcacatcttgaagc 34602771  T
Q  133 tttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaatt 232  Q
    ||||||| ||||||||||||| |||||||||| |||||| | |||||||||||| |||||||||||||||||||||||||||||||||  |||||||||     
T  34602772 tttgaacatcacccaaagaccttcaacctttaatatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagcttttccaacaaatg 34602870  T
Q  233 ggtcataga 241  Q
    |||||||||    
T  34602871 ggtcataga 34602879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 19752526 - 19752258
Alignment:
Q  28 actctccactcatgtgtttcccatc-ctatgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatct 126  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| |  ||||||||| |||||||||| |||| |||||||||      
T  19752526 actctccactcatgtgtttcccaactcaatgaatcttccccaaaaggcaccaacctttt-cataagagccccatcttttggttctccaagattcacatta 19752428  T
Q  127 tgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaa 226  Q
    ||| |||| |||||||||||||||||| ||||||||||||||||| | ||||||||| || |||| |||||||| |||||||||||||||||||||||||    
T  19752427 tgacgcttagaacctcacccaaagaccttcaacctttagtatcta-aaaccctaaaaattccctcatttggttttcatgagattcaccaagcttacccaa 19752329  T
Q  227 caaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtg 297  Q
    ||||| |||||| || ||| ||    ||| ||||||||| | ||||||||||||||||||||||| ||||||    
T  19752328 caaatgggtcatggagtgcttaaaacgtgtttcagatcc-gtcaaaatcgtgtcacgttttcccatatcgtg 19752258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 26 - 216
Target Start/End: Complemental strand, 47115014 - 47114825
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    |||||||||| |||||||||||||| ||  |||||||||||| |||||| ||||||| | ||||||||||||||||||||||||| |||| ||||||||     
T  47115014 agactctccattcatgtgtttcccaaccccatgaatcttccc-aaaaggtaccaaccctgttcccaagagccccctcttttggttctccaagattcacag 47114916  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaa 216  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||| |  || |||||||| |||||||||||||||||||||||||||||    
T  47114915 cttgaagctttgaacctcacccaaagaccctcaatctttaatatcta-aagccttaaaagttccctcctttggtttccatgagattcaccaa 47114825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 6808228 - 6808084
Alignment:
Q  88 ccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccc-tcaacctttagtatctacataccctaaaagtt 186  Q
    ||||||||||  |||||||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| | |  |||||||||    
T  6808228 ccaagagcccaatcttttggttctccaagattcacatcttgaagttttgaacctcacctaaagacccctcaacctttagtatctaaaaaatctaaaagtt 6808129  T
Q  187 tcctcctttggtttccatgagattcaccaagcttacccaacaaat 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  6808128 tcctcctttggtttccatgagattcaccaagcttactcaacaaat 6808084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 41135664 - 41135452
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcaca 123  Q
    |||||||||  | |||||||||||| ||  |||||||| |||| |||||||||||||| | | ||||| | |  |||||||||||| |||| ||| ||||    
T  41135664 agactctcctttgatgtgtttcccaaccccatgaatctctccctaaaaggcaccaaccctct-cccaaaatcttcctcttttggttctccaagatccaca 41135566  T
Q  124 tcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacc 223  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||| || ||||||||||||||||||||||| ||||||||||      
T  41135565 tcttgaaggtttgaacctcacccaaagaccctcaacctttagtatctaaatacattaaaatttccctcctttggtttccatgagattaaccaagcttatt 41135466  T
Q  224 caacaaattggtca 237  Q
    |||||||| |||||    
T  41135465 caacaaatgggtca 41135452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 39 - 217
Target Start/End: Original strand, 9109739 - 9109918
Alignment:
Q  39 atgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttg 136  Q
    |||||| ||||| ||| |||||||| |||||||||| || ||||| | | |||| ||| ||||| |||||||| |||| |||||||||||||||| ||||    
T  9109739 atgtgtctcccaacctcatgaatctctccccaaaagacatcaaccctct-cccatgagtccccttttttggttctccaagattcacatcttgaagttttg 9109837  T
Q  137 aacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaag 217  Q
    ||||||||||||| |||||||||||||||||| || |||||| ||||||||| || |||| ||||||||| ||||||||||    
T  9109838 aacctcacccaaataccctcaacctttagtatttatataccccaaaagtttcatcatttgatttccatgacattcaccaag 9109918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 44454978 - 44454849
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||| |||||||| |||||||||||||   || |||||||| |||||||||||||||||||||||| |||||||  | ||||||||||||||||    
T  44454978 caaaatcgtgccacgttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtacaaccaaccttatcttgaaaacttgcccagcaagccgaaaat 44454879  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| ||| |||||||||||||||||    
T  44454878 cgtgtcacgtttccccaaaatcgtgtcacg 44454849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 100 - 297
Target Start/End: Original strand, 31928208 - 31928397
Alignment:
Q  100 tcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtt 199  Q
    |||||||||| || | |||||||||||||||||||||||||||| |||||||| |||||||||||||||         ||||||||| ||||||||||||    
T  31928208 tcttttggttttctaagattcacatcttgaagctttgaacctcatccaaagactctcaacctttagtat---------ctaaaagttccctcctttggtt 31928298  T
Q  200 tccatgagattcaccaagcttacccaa-caaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtg 297  Q
    ||||||| ||||||||||||||||||| ||||| |||||| || ||| || |  ||| ||||||| | | ||||||||| ||||||||||| ||||||||    
T  31928299 tccatgaaattcaccaagcttacccaatcaaatgggtcatggagtgcttaagacgtgtttcagat-ctgtcaaaatcgtatcacgttttccaaaatcgtg 31928397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 31659057 - 31658928
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||| |||| |||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||    |||||||||  |||||    
T  31659057 caaaatcgtgtcacattttaccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaactttcccagcaagcaaaaaat 31658958  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
      |||||| |||||||||||||||||||||    
T  31658957 tgtgtcacgttttcccaaaatcgtgtcacg 31658928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 28220575 - 28220705
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagc-aagccgaaaa 366  Q
    |||||||||||||||||||||||||||||||||   || |||||||| ||||||||||| |||||||||||| | || ||  |||  || ||||||||||    
T  28220575 caaaatcgtgtcacgttttcccaaatcgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaa 28220674  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||||||||    
T  28220675 tcgtgtcacgttttcccaaaatcgtgtcacg 28220705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 49918168 - 49918039
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||| ||||||||||||||||||   |||||| |||| ||||||||||  ||||||||||||||||||||| | ||||||||   |||||    
T  49918168 caaaatcgtgtcacattttcccaaatcgtgacacgattggtgtgtacgacccaaggtatgaccaaccttatcctgaaaacgtgcccagcaagttaaaaat 49918069  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||| | ||||||||||||||    
T  49918068 cgtgtcacgtttttcgaaaatcgtgtcacg 49918039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 30476797 - 30476904
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||||||||||||||||   |||||| |||| ||||||||| |||||||||||||| |||||||  | ||||||| ||||||||    
T  30476797 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgtgtacgacccaaggttcaaccaaccttatcttgaaaacttgcccagcaaaccgaaaat 30476896  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  30476897 cgtgtcac 30476904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 13598782 - 13598904
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    ||||||||||||||||||  |||||| ||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  13598782 caaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 13598881  T
Q  367 tcttgtcacattttcccaaaatc 389  Q
    || ||||||||||||||||||||    
T  13598882 tcgtgtcacattttcccaaaatc 13598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 28223770 - 28223900
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagc-aagccgaaaa 366  Q
    |||||||||||||||||||||||||| ||||||   || |||||||| ||||||||||| |||||||||||| | || ||  |||  || ||||||||||    
T  28223770 caaaatcgtgtcacgttttcccaaattgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaa 28223869  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||||||||    
T  28223870 tcgtgtcacgttttcccaaaatcgtgtcacg 28223900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 1833341 - 1833212
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtc-cagcaagccgaaaa 366  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||  |||||||||||| ||||||  |  | ||||||||| ||||    
T  1833341 caaaatcgtgtcacgttttcgcaaatcgtgacacgtttggtgcgtacaacccaaggtatgaccaaccttatcttgaaaaatgtactcagcaagccaaaaa 1833242  T
Q  367 tcttgtcacattttcccaaaatcgtgtcac 396  Q
    || ||| |  ||||||||||||||||||||    
T  1833241 tcgtgttatgttttcccaaaatcgtgtcac 1833212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 10925042 - 10924913
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||| |||||||||||||  |||| ||||||  ||||||||||  |||||| ||||  |||||||  | | | ||||||||||||    
T  10925042 caaaatcgtgtcacgttttgccaaatcgtgacacggttgatgcgtatgacccaaggtatgaccaactttattttgaaaacttgcctaccaagccgaaaat 10924943  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||||||| ||||||||||||||||    
T  10924942 cgtgtcacatttttccaaaatcgtgtcacg 10924913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 483
Target Start/End: Original strand, 42298542 - 42298642
Alignment:
Q  383 caaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttcttaa 482  Q
    |||||||||||||| |||||||| ||| ||||| |||||||||  |||||||||||||||||||| || |||||||||||| |||||||| ||||| |||    
T  42298542 caaaatcgtgtcacattttgccttcagaaccaaacatgcattcggcatcagaaatcgtgacacggttgccaaatcgtgtcatgattcttcactttcataa 42298641  T
Q  483 a 483  Q
    |    
T  42298642 a 42298642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 4552997 - 4553126
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||| ||||||||||||| |||||||||||||  |||| ||||||| || || | ||| || |||||||||||||||||| ||| | |||| |||||||    
T  4552997 caaaaacgtgtcacgttttgccaaatcgtgacacggttgatgcgtacgactcacgatacgactaaccttatcctgaaaacgtgtcaaacaagtcgaaaat 4553096  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | | |||| ||||| |||||||||||||||    
T  4553097 catatcacgttttctcaaaatcgtgtcacg 4553126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 22079109 - 22078995
Alignment:
Q  94 gccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcct 193  Q
    |||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||| | || |    
T  22079109 gccccctcttttggttctttaagattcacatcttgaagctttgaacctcacccaaagaccctcaaacttta--------ataccctaaaagttccatcat 22079018  T
Q  194 ttggtttccatgagattcaccaa 216  Q
    || |||||||| |||||||||||    
T  22079017 ttagtttccataagattcaccaa 22078995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 318 - 402
Target Start/End: Complemental strand, 3156636 - 3156552
Alignment:
Q  318 ccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacgttttg 402  Q
    ||||||||| ||||||||||||||||||||| ||||||||| || |||||| ||| |  ||||||||||||||||||||| ||||    
T  3156636 ccaaggtacgaccaaccttatcctgaaaacgtgtccagcaaaccaaaaatcgtgttatgttttcccaaaatcgtgtcacgatttg 3156552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 276 - 397
Target Start/End: Original strand, 37070157 - 37070279
Alignment:
Q  276 tgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtca 374  Q
    ||||||| ||| |||||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||| ||||   ||||||| |||||    
T  37070157 tgtcacgattttccaaatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtca 37070256  T
Q  375 cattttcccaaaatcgtgtcacg 397  Q
    | |||||||||||||||| ||||    
T  37070257 cgttttcccaaaatcgtgacacg 37070279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 11348284 - 11348191
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||| | |||| |||| ||||||||||||||||||||  | ||| ||||||||||||| |||||| |||  ||||||||||||||||    
T  11348284 ttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttctccaaaatcgtgtcacg 11348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 66 - 171
Target Start/End: Original strand, 16216860 - 16216964
Alignment:
Q  66 ccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttag 165  Q
    |||||| ||||||||| |||||  |||||||||||||||||||| | || |||  |||||||||| |||||||  ||||||||||||||| |||||||||    
T  16216860 ccaaaatgcaccaacccttttcg-aagagccccctcttttggttcttcaagatatacatcttgaacctttgaatatcacccaaagacccttaacctttag 16216958  T
Q  166 tatcta 171  Q
    | ||||    
T  16216959 tttcta 16216964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 3206805 - 3206675
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggta-caaccaaccttatcctgaaaa-cgggtccagcaagccgaaaa 366  Q
    ||||||||||||||||| ||||||| ||| ||   ||| ||||||| |||||||||| | |||||||||||||| |||| |  | |||||||| ||||||    
T  3206805 aaatcgtgtcacgtttttcccaaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaa 3206706  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||| ||||||||    
T  3206705 tcgtgtcacgttttcccaaaattgtgtcacg 3206675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 3282089 - 3282218
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    ||||||||||||||||||| | |||||||| ||   ||||||||||| ||||||||||  |||||||||||| ||||||||   ||||||||   |||||    
T  3282089 caaaatcgtgtcacgtttttc-aaatcgtggcacgattggtgcgtacgacccaaggtatgaccaaccttatcttgaaaacgtacccagcaagtttgaaaa 3282187  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| ||||| |||||||||| ||||    
T  3282188 tcgtgtcacgttttctcaaaatcgtgacacg 3282218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 346
Target Start/End: Original strand, 29652195 - 29652273
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||| ||||||||||  |||||||||||||   |||||| |||| ||||||||||| |||||||||||||||||||    
T  29652195 caaaatcatgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaggtacgaccaaccttatcctgaaaa 29652273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 21536285 - 21536206
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 348  Q
    ||||||||||||||||||||| |||||| | ||   ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  21536285 caaaatcgtgtcacgttttcc-aaatcggggcacgattggtgcgtacgacccaaggtacgaccaacctcatcctgaaaacg 21536206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 28318094 - 28318225
Alignment:
Q  36 ctcatgtgtttcccatcctatgaatct-tccccaaaaggcaccaacctttttcccaagagcccc-ctcttttggttatccatgattcacatcttga-agc 132  Q
    ||||| |||||| ||||| |||||||| ||||||||| |||| |||| ||| ||||||| |||| ||||||||||||||||  |||||||||||||   |    
T  28318094 ctcatatgtttctcatcccatgaatctctccccaaaatgcactaacccttt-cccaagaacccctctcttttggttatccaaaattcacatcttgacccc 28318192  T
Q  133 tttgaacctcacccaaagaccctcaacctttag 165  Q
    |||||| |||| ||||||| ||||||| |||||    
T  28318193 tttgaaactcatccaaagatcctcaacttttag 28318225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 3331328 - 3331255
Alignment:
Q  84 tttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctca 157  Q
    |||||||||||||||||||||||||| || | ||||||||||||||   ||| || |||||| |||||||||||    
T  3331328 tttcccaagagccccctcttttggttctctaagattcacatcttgatcatttaaatctcacctaaagaccctca 3331255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 6068447 - 6068287
Alignment:
Q  40 tgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttga 137  Q
    ||||||||||| ||| |||||||| | |||||||| |||||||||||| || ||||||||||||||||||||  |   ||||||| |||| |   |||||    
T  6068447 tgtgtttcccaaccttatgaatctcttcccaaaagacaccaacctttt-cctaagagccccctcttttggttcccttagattcacgtcttcatcatttga 6068349  T
Q  138 acctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtt 199  Q
    | |||| ||||||||||||||| |||||  | ||  | |||||||||||  |||||||||||    
T  6068348 atctcatccaaagaccctcaacttttagcctttaagttccctaaaagttctctcctttggtt 6068287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 20762490 - 20762361
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||| | | | ||||||| ||||||||||||||||||| |  | ||| |||||| |||||    
T  20762490 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgttcgatcaaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 20762391  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||  ||||||||||||||||||||    
T  20762390 cgtgtcacgatttcccaaaatcgtgtcacg 20762361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 31926035 - 31926099
Alignment:
Q  30 tctccactcatgtgtttcccat-cctatgaatcttccccaaaaggcaccaacctttttcccaaga 93  Q
    |||||||||| ||||||||||  || ||||||||||||||||||||||||||| ||||| |||||    
T  31926035 tctccactcacgtgtttcccaaacccatgaatcttccccaaaaggcaccaacccttttcacaaga 31926099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 3189131 - 3189040
Alignment:
Q  308 tgcgtacaacccaaggta-caaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||| |||||||||| | |||||||||||||| |||| |  | |||||||| |||||||| |||||| |||||||||||| ||||||||    
T  3189131 tgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacg 3189040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 3197948 - 3197857
Alignment:
Q  308 tgcgtacaacccaaggta-caaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||| |||||||||| | |||||||||||||| |||| |  | |||||||| |||||||| |||||| |||||||||||| ||||||||    
T  3197948 tgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacg 3197857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 13604336 - 13604259
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| ||||||||||| ||||||||||||||||||||    
T  13604336 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 13604259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 13316666 - 13316775
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    ||||||||||||||||||| ||| | ||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  13316666 caaaatcgtgtcacgtttttccccactcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 13316765  T
Q  366 atcttgtcac 375  Q
    ||| ||||||    
T  13316766 atcgtgtcac 13316775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 13659694 - 13659778
Alignment:
Q  310 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||| ||||| ||||| |||||||||||   |  |||| ||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  13659694 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacg 13659778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 346
Target Start/End: Complemental strand, 15820124 - 15820048
Alignment:
Q  270 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||||||| | || || |||||| ||||  |||| ||||||| ||||||||||| |||||||||||||| ||||    
T  15820124 aaatcgtgtcatggttgccaaaatcgagacatggttgatgcgtacgacccaaggtacgaccaaccttatcctaaaaa 15820048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 22819852 - 22819940
Alignment:
Q  308 tgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 396  Q
    ||||||| ||||||||||| ||||| ||||| ||||||||| ||| | || ||  |||||| ||||||| |||| ||||||| ||||||    
T  22819852 tgcgtacgacccaaggtacgaccaaacttattctgaaaacgtgtcaaacatgcgaaaaatcatgtcacagtttctcaaaatcatgtcac 22819940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 16455464 - 16455385
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 348  Q
    |||| ||||||||| ||  |||||||||| ||  |||| ||||||| ||||||||||| | ||| |||||||||||||||    
T  16455464 aaaaacgtgtcacgattggccaaatcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaacg 16455385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 16124328 - 16124295
Alignment:
Q  315 aacccaaggtacaaccaaccttatcctgaaaacg 348  Q
    |||||||||||| |||||||||||||||||||||    
T  16124328 aacccaaggtacgaccaaccttatcctgaaaacg 16124295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 26 - 375
Target Start/End: Complemental strand, 27015375 - 27015026
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  |||| |||||||||||||||||||||| ||||| ||||||||||||||||||||| | || |||||||||    
T  27015375 agactctccactcatgtgtttcccaaccccatgattcttccccaaaaggcaccaacccttttcacaagagccccctcttttggttcttcaagattcacat 27015276  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||| |||||| |||||    
T  27015275 cttgaagctttgatcctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttgatttccattagattcgccaagcataccc 27015177  T
Q  225 aacaaat-tggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaagg 323  Q
     ||||||  |||||||||||||||||   |||||||||||||| ||||||||||||||| |||||||||||||||||   ||||||||||| ||||||||    
T  27015176 -acaaatggggtcatagaatgcatatattgtgttcagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaagg 27015078  T
Q  324 tacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 375  Q
    ||| ||||||||||||||||||||  | ||| ||||| ||||||| ||||||    
T  27015077 tacgaccaaccttatcctgaaaacatgcccaacaagctgaaaatcgtgtcac 27015026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 27 - 339
Target Start/End: Complemental strand, 38746847 - 38746535
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    ||||||||||||| |||||||||| ||  ||||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||| ||||||||||    
T  38746847 gactctccactcacgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcttaagagccccctcttttggttctccaagattcacatc 38746748  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  38746747 ttgaaactttgaacctcacccaaagaccctcaacctttagtatctaaa-accctaaaagttctctcctttggtttccatgagattcaccaagcttaccca 38746649  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    ||||||  |||| |||||||||||   |||||||||||||  ||||||||||||| | |||||||||| ||||||   ||||||||||| ||||||||||    
T  38746648 acaaatgagtcaaagaatgcatatattgtgttcagatccgaacaaaatcgtgtcatgatttcccaaattgtgacacgtttggtgcgtacgacccaaggta 38746549  T
Q  326 caaccaaccttatc 339  Q
    | ||||||||||||    
T  38746548 cgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 27 - 397
Target Start/End: Complemental strand, 5057889 - 5057521
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| || | ||||||||||    
T  5057889 gactctccactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaacctttttcccaaaagcccc-tcttttggttctcaaagattcacatc 5057791  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||| ||| |    |    
T  5057790 ttgaagctttgatcctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttctctcctttggtttccatgagattcacccagc-tcttta 5057693  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    |||||| |||||| || ||| ||   ||||||||||||||| |||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||||||    
T  5057692 acaaatgggtcatggagtgcttacatagtgttcagatccggacaaaatcgtgtcacgttttcccaaattgtgacacggttgatgcgtacgaccaaaggta 5057593  T
Q  326 caaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    | ||||||||||||||||||||  |  || |||| |||||||  |||||| |||| ||||||||||||||||    
T  5057592 cgaccaaccttatcctgaaaacttgctcaacaagtcgaaaattgtgtcacgttttaccaaaatcgtgtcacg 5057521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 26 - 285
Target Start/End: Complemental strand, 40147104 - 40146843
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  40147104 agactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaaccattttcccaagagccccctcttttggttctccaagattcacat 40147005  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  40147004 cttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagtttcatcctttggtttccatgagattcaccaagcttaacc 40146906  T
Q  225 aacaaattggtcatagaatgc--atatgcagtgttcagatccgggcaaaatcgtgtcacgttt 285  Q
    ||||||| |||||| || |||  | ||  ||||||||||||| | |||||||||| |||||||    
T  40146905 aacaaatgggtcatggagtgcttacatatagtgttcagatccagacaaaatcgtgacacgttt 40146843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 213312 - 213099
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatcc-atgattcaca 123  Q
    ||||||||||||||||||||||||| ||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||    
T  213312 agactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaacccttttcccaagagccccctcttttggttctcccaagattcaca 213213  T
Q  124 tcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacc 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  213212 tcttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcatcaagcttacc 213114  T
Q  224 caacaaattggtcat 238  Q
    ||| |||| ||||||    
T  213113 caaaaaatgggtcat 213099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 28278163 - 28277963
Alignment:
Q  22 caatagactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccc-tcttttggttatccatgatt 119  Q
    |||||| |||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||    
T  28278163 caatagtctctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttttcccaagagcccccctcttttggttctccaagatt 28278064  T
Q  120 cacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagct 219  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||    
T  28278063 cacatcttgaagctttgaacctcatccaaagaccctcaacctttagtatcta-aaaccctaaaagtttcctcctttagtttccttgagattcaccaagct 28277965  T
Q  220 ta 221  Q
    ||    
T  28277964 ta 28277963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 31 - 238
Target Start/End: Original strand, 16642208 - 16642414
Alignment:
Q  31 ctccactcatgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttg 128  Q
    |||||||||||||||||| | ||  |||||||| ||||||||||||||||||| ||| |||||||||||  |||||||||| | || ||||||| |||||    
T  16642208 ctccactcatgtgtttcctaaccccatgaatctgtccccaaaaggcaccaacccttt-cccaagagccc--tcttttggttcttcaagattcacttcttg 16642304  T
Q  129 aagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaaca 228  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  16642305 aagctttgaacctcacccaaagaccatcaacctttagtatctaaataccctaaaagtgctctcctttggtttccatgagattcaccaagcttacccaaca 16642404  T
Q  229 aattggtcat 238  Q
    ||| ||||||    
T  16642405 aatgggtcat 16642414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 27637941 - 27638131
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||| ||||||||||||||| | ||  |||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||| |||| |||||||||    
T  27637941 agactcttcactcatgtgtttcctaaccccatgaatcttccc-aaaatgcaccaacccttttcccaagagctccctcttttggttctccaagattcacat 27638039  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagc 218  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||    
T  27638040 cttgaa-ctttgaacctcacccaaagattctcaacctttagtatcta-aaaccttaaaagttccctcctttggtttccatgagattcaccaagc 27638131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 39 - 215
Target Start/End: Complemental strand, 316596 - 316419
Alignment:
Q  39 atgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttg 136  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||| | | ||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  316596 atgtgtttcccaaccttatgaatctctccccaaaaggcaccaaccctct-cccaagagcccccccttttggttctccaagattcacatcttgaagctttg 316498  T
Q  137 aacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcacca 215  Q
    |||||||||||||||||||||||||||||||||||  |||  ||||||||  ||||||| |||||||||||||||||||    
T  316497 aacctcacccaaagaccctcaacctttagtatctaagtacaataaaagttctctcctttagtttccatgagattcacca 316419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 55 - 232
Target Start/End: Complemental strand, 35615985 - 35615808
Alignment:
Q  55 atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagacc 153  Q
    |||||||| ||||||||||||| || || ||| |||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  35615985 atgaatctctccccaaaaggcatcaccccttt-cccaagagtcccctcttttggttctccaagattcacatcttgaagctttgaacctcactcaaagacc 35615887  T
Q  154 ctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaatt 232  Q
    |||||||||||||||||| |||| ||||||||||  || ||||||||| | |||||||||||||||||| |||||||||    
T  35615886 ctcaacctttagtatctaaatactctaaaagttttttcatttggtttcaaggagattcaccaagcttacgcaacaaatt 35615808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 28 - 237
Target Start/End: Complemental strand, 30793080 - 30792872
Alignment:
Q  28 actctccactcatgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||| |||||||||||||||| ||  |||||| | ||||||||||||||||||||||| ||||| |||| | | |||||||| |||| |||  |||||    
T  30793080 actctctactcatgtgtttcccaaccccatgaatatctccccaaaaggcaccaacctttt-cccaa-agccacatattttggttctccaagata-acatc 30792984  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||| ||| ||||||||||||||||||||||||||||||  |    
T  30792983 ttgaagctttgaacatcacctaaagaccctcaacctttagtatctaattaccctaaaagtttactcatttggtttccatgagattcaccaagcttactta 30792884  T
Q  226 acaaattggtca 237  Q
    |||||| |||||    
T  30792883 acaaatgggtca 30792872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 28 - 231
Target Start/End: Complemental strand, 30802782 - 30802579
Alignment:
Q  28 actctccactcatgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    ||||||||||||||||||| | | ||  |||||||| |||||||||||||| |||| ||| |||||||||| |||||||||||| || | |||  |||||    
T  30802782 actctccactcatgtgttttctaaccccatgaatctctccccaaaaggcacaaacccttt-cccaagagcctcctcttttggttctctaagata-acatc 30802685  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
     ||||||||||||||||||| |||||||||||||||  | |||||| |||||||||||||| |||| |||||||||||||||||||||||||| ||| ||    
T  30802684 atgaagctttgaacctcacctaaagaccctcaacctagaatatctaaataccctaaaagttccctcatttggtttccatgagattcaccaagcgtactca 30802585  T
Q  226 acaaat 231  Q
    ||||||    
T  30802584 acaaat 30802579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 14689774 - 14689938
Alignment:
Q  66 ccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttag 165  Q
    |||||||||||||||| ||| | ||||| |||| |||||||||| ||||  |||||||||||||| |||||||| |||| |||||||||| |||||| |     
T  14689774 ccaaaaggcaccaacccttt-cacaagaaccccttcttttggttctccaaaattcacatcttgaaactttgaacatcactcaaagacccttaaccttcac 14689872  T
Q  166 tatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaat 231  Q
    |||||| || |||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||    
T  14689873 tatctaaatgccctaaaagttttctcctttagtttccatgagattcaccaagcctactcaacaaat 14689938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 10055027 - 10055237
Alignment:
Q  22 caatagactctccactcatgtgtttcccatccta-tgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgatt 119  Q
    |||| ||||||| |||||||||||||||| ||   ||||||| |||||| |||||||||| | ||| ||||||||||| ||||||||||| |||| ||||    
T  10055027 caattgactctctactcatgtgtttcccaaccccgtgaatctctccccataaggcaccaaaccttt-cccaagagccctctcttttggttctccaagatt 10055125  T
Q  120 cacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagct 219  Q
    ||||||||||||||||||| |||||||||| ||| |||| |||||||||| |  ||| ||||| ||| | || |||| |||| |||||||||||||| ||    
T  10055126 cacatcttgaagctttgaatctcacccaaaaaccttcaatctttagtatccaagtactctaaatgttccatcatttgatttctatgagattcaccaaact 10055225  T
Q  220 tacccaacaaat 231  Q
    ||| ||||||||    
T  10055226 tactcaacaaat 10055237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 42426584 - 42426713
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||| ||||||||    
T  42426584 caaaattgtgtcacgttttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaat 42426683  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
      |||||| |||||||||||||||||||||    
T  42426684 tgtgtcacgttttcccaaaatcgtgtcacg 42426713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 4160475 - 4160284
Alignment:
Q  27 gactctccactcatgtgtttcccatcctatgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    ||||||||||| | ||||| || | ||||||||||| |||||||||| |||  ||| | | ||||||||||||||||||| ||| |||| ||||||| ||    
T  4160475 gactctccacttacgtgttcccaaccctatgaatctctccccaaaagacacttaccctct-cccaagagccccctcttttagttctccaggattcacttc 4160377  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagct 219  Q
    || || |||||||| ||||||||| |||||||| |||||||||||| |||||||||| |||  ||| |||||||||||||||||||||| ||||    
T  4160376 tttaaactttgaacatcacccaaa-accctcaaactttagtatctaaataccctaaatgttctctcatttggtttccatgagattcaccgagct 4160284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 13488022 - 13487895
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  13488022 caaaattgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 13487923  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    |  ||    |||||||||||||||||||||    
T  13487922 c--gtgctgttttcccaaaatcgtgtcacg 13487895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 32636643 - 32636513
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaaa 366  Q
    ||||||| |||||||||||||||||||||||||   ||||||||||  ||||||||||| ||||||||||||||| |||||  | |||||||| ||||||    
T  32636643 caaaatcatgtcacgttttcccaaatcgtgacacgtttggtgcgtaagacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaa 32636544  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || || ||| |||||||||||||||||||||    
T  32636543 tcgtgccacgttttcccaaaatcgtgtcacg 32636513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 19806225 - 19806118
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||| ||||||||||| |||||||||||||| |||||| | | ||||||||||||||    
T  19806225 caaaatcgtgtcacgttttcccaagtcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctaaaaacgtgcctagcaagccgaaaat 19806126  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  19806125 cgtgtcac 19806118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 395
Target Start/End: Original strand, 16650971 - 16651098
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||| |||| |||||||||||||  |||||||||||| | ||||||||| |||||||||||||||||||||   ||| ||||    ||||    
T  16650971 caaaatcgtgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaacgtacccaacaagttataaat 16651070  T
Q  368 cttgtcacattttcccaaaatcgtgtca 395  Q
    | |||||| |||||||||||||||||||    
T  16651071 cgtgtcacgttttcccaaaatcgtgtca 16651098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 33906383 - 33906491
Alignment:
Q  55 atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagacc 153  Q
    |||||||| ||||||||||||||||||| | | |||||||||||||| |||||||| | || ||||||||| |||| |||| ||||||||| ||||||||    
T  33906383 atgaatctctccccaaaaggcaccaaccctct-cccaagagcccccttttttggttctacaagattcacattttgaggcttcgaacctcactcaaagacc 33906481  T
Q  154 ctcaaccttt 163  Q
    ||||||||||    
T  33906482 ctcaaccttt 33906491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 11916687 - 11916557
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    |||||||||||||||||||| |||||||||| |   ||||||||||| ||||||||||| |||||||| |||||||||||    ||| ||||   |||||    
T  11916687 caaaatcgtgtcacgttttctcaaatcgtgatacgattggtgcgtacgacccaaggtacgaccaacctgatcctgaaaacatacccaacaagtttgaaaa 11916588  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||| ||||    
T  11916587 tcgtgtcacgttttcccaaaatcgtgacacg 11916557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 375
Target Start/End: Complemental strand, 535700 - 535615
Alignment:
Q  290 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 375  Q
    |||||||||||   ||||||| ||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  535700 aaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcac 535615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 39468917 - 39468988
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 375  Q
    ||||||| ||| ||||||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  39468917 ttggtgcatacgacccaaggtacgaccaaccttatcctaaaaacgtgtccagcaagccgaaaatcgtgtcac 39468988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 13239572 - 13239442
Alignment:
Q  268 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaa 366  Q
    |||||| ||||||||||||||   ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||||  |||||||||| | || |    
T  13239572 caaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagtcaaaga 13239473  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| ||| ||||||||| |||||||    
T  13239472 tcgtgtcacgtttacccaaaatcttgtcacg 13239442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 14520612 - 14520733
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    ||||||||||||||||||||| |||||||||||   ||  ||||||| ||||||||||| |||||||||||||||||||||   ||| ||||   |||||    
T  14520612 caaaatcgtgtcacgttttcc-aaatcgtgacacgattaatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaa 14520710  T
Q  367 tcttgtcacattttcccaaaatc 389  Q
    || |||||| |||||||||||||    
T  14520711 tcgtgtcacgttttcccaaaatc 14520733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 397
Target Start/End: Complemental strand, 31004868 - 31004739
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcct-gaaaacgggtccagcaagccgaaaat 367  Q
    |||| ||||||||||||  |||||||||||||   ||||||||||| |||||| |||||||||||||||||||  |||||| | ||||||||  ||| ||    
T  31004868 aaaaacgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcctaaaaaacgtgcccagcaagttgaatat 31004769  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | | |||| |||||||| ||||||| ||||    
T  31004768 cgtatcacgttttcccacaatcgtgacacg 31004739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 397
Target Start/End: Complemental strand, 40146820 - 40146739
Alignment:
Q  316 acccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||| |||||| || ||||||||||| | ||| ||||| |||||||  |||||||||||||||||||||||||||    
T  40146820 acccaaggtacgaccaactttttcctgaaaacgtgaccaacaagctgaaaatcgagtcacattttcccaaaatcgtgtcacg 40146739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 12083892 - 12083813
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 348  Q
    |||||| |||||||||||||| |||||||||||   ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  12083892 caaaattgtgtcacgttttcc-aaatcgtgacacgattggtgcatacgacccaaggtacgaccaaccttatcctgaaaacg 12083813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 42428822 - 42428896
Alignment:
Q  323 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||| |||||||||||||| |||||  | |||||||||| |||||| |||||| |||||||||||||||||||||    
T  42428822 gtacgaccaaccttatcctaaaaacttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 42428896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 33906578 - 33906650
Alignment:
Q  147 aaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagctt 220  Q
    ||||| |||||||||||| |||||| ||||||||||||||  || ||||||||| |||||||||||||||||||    
T  33906578 aaagaacctcaacctttaatatctaaataccctaaaagttctcttctttggttt-catgagattcaccaagctt 33906650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 38746529 - 38746460
Alignment:
Q  328 accaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||| |||| ||||||  ||||||||    
T  38746529 accaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgtttttccaaaaatgtgtcacg 38746460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 268 - 340
Target Start/End: Original strand, 16649972 - 16650044
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcc 340  Q
    ||||||| |||||| |||| |||||||||||||  |||||||||||| | ||||||||| |||||||||||||    
T  16649972 caaaatcatgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 30683312 - 30683386
Alignment:
Q  323 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||| ||||||||||||||||||||  | | |||||| |||||||| |||||| |||||||||||| ||||||||    
T  30683312 gtacgaccaaccttatcctgaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacg 30683386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 37438925 - 37438835
Alignment:
Q  308 tgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||| ||||||||||| || |||||||||||||||| |  | ||| |||||| |||||| |||||| ||||||||||||| |||||||    
T  37438925 tgcgtacgacccaaggtacgacaaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcatgtcacg 37438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 375
Target Start/End: Complemental strand, 25412580 - 25412473
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||||    
T  25412580 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaat 25412481  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  25412480 cgtgtcac 25412473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 533588 - 533542
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 314  Q
    |||||||||||||||||||||||||||||||||   |||||||||||    
T  533588 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtac 533542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 13342881 - 13342772
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | | ||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  13342881 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatctaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 13342782  T
Q  366 atcttgtcac 375  Q
    ||| ||||||    
T  13342781 atcgtgtcac 13342772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 30182409 - 30182329
Alignment:
Q  268 caaaatcgtgtcacgtttt--cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    |||||||||||||||||||  ||| ||||||| ||   ||| ||||||| | ||||||||| |||||||||||||||||||    
T  30182409 caaaatcgtgtcacgtttttcccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 30182329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 9353048 - 9352971
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||| |||||||||| |||||||| ||   ||| |  |||| ||||||||||| ||||||||||||||||||||    
T  9353048 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaac 9352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 36932023 - 36931986
Alignment:
Q  310 cgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  36932023 cgtacgacccaaggtacgaccaaccttatcctgaaaac 36931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 27 - 396
Target Start/End: Original strand, 6360238 - 6360607
Alignment:
Q  27 gactctccactcatgtgtttcccatc-ctatgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    ||||||||||||||||||||  || | | ||||||||||  ||||||||||||  | ||||| ||||||||||||||||||||| |||| ||||||||||    
T  6360238 gactctccactcatgtgtttttcaactccatgaatcttcttcaaaaggcaccattccttttctcaagagccccctcttttggttctccaagattcacatc 6360337  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||| | ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  6360338 ttgaaacttttaacctcacccaaagaccctcaacctttaatatctaaa-accctaaaagttctctcctttggtttccatgagattcaccaagcttaccca 6360436  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggta 325  Q
    |||||| ||||| ||||||| |||   |||||||||||||| ||||||||||||||  |||||||||||||||||   ||||||||||| ||||||| ||    
T  6360437 acaaatgggtcaaagaatgcttataatgtgttcagatccggacaaaatcgtgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagata 6360536  T
Q  326 caaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 396  Q
    | |||||| |||||||||||||  | ||| ||||||||||||| |||||| ||| ||||||||||||||||    
T  6360537 cgaccaacattatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttccccaaaatcgtgtcac 6360607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 55 - 397
Target Start/End: Original strand, 32358191 - 32358532
Alignment:
Q  55 atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccc 154  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  32358191 atgaattttccccaaaaggcaccaacccttttcacaagagccccctcttttggttctccaagattcacatcttgaagctttgaacctcacccaaagaccc 32358290  T
Q  155 tcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagt 254  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||   |||||||| |||||| || ||| ||   |||    
T  32358291 tcaacctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagctttttcaacaaatgggtcatggagtgcttacatagt 32358389  T
Q  255 gttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtcca 354  Q
    |||||||||||| ||||||||||||||  ||| ||||||| |||||   ||||||||||| | ||||||||| | |||| |||||||||||||| | |||    
T  32358390 gttcagatccggacaaaatcgtgtcacaattttccaaatcatgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaacgtgccca 32358489  T
Q  355 gcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||||| ||||||  |||||| ||||||||||||||| |||||    
T  32358490 gcaagctgaaaattgtgtcacgttttcccaaaatcgtatcacg 32358532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 26 - 238
Target Start/End: Original strand, 34311041 - 34311254
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  34311041 agactctccactcatgtgttttccatccccatgaaccttccccaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacat 34311140  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34311141 cttgaagctttgaacctcacccaaggaccctcaacctttagtatctacataccctaaaagttccttcctttggtttccatgagattcaccaagcttaccc 34311240  T
Q  225 aacaaattggtcat 238  Q
    || |||||||||||    
T  34311241 aaaaaattggtcat 34311254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 22269824 - 22269605
Alignment:
Q  18 ctctcaatagactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatg 116  Q
    |||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| | ||||||||||||||| |||||||||| |||| |    
T  22269824 ctctcaatagactctccactcatgtgtttcccctccccatgaatcttccccaaaaggcaccaac-tctttcccaagagcccc-tcttttggttctccaag 22269727  T
Q  117 attcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaa 216  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22269726 attcacatcttgtagctttgaacctcacccaaagaccctcaaactttagtatctacataccctaaatgttccctcctttggtttccatgagattcaccaa 22269627  T
Q  217 gcttacccaacaaattggtcat 238  Q
    |||| |||||||||| ||||||    
T  22269626 gcttgcccaacaaatgggtcat 22269605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 26 - 314
Target Start/End: Complemental strand, 29608579 - 29608296
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  |||||||     ||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||    
T  29608579 agactctccactcatgtgtttcccaaccccatgaatc-----caaaaggcaccaacccttttcacaagagccccctcttttggttctccaagattcacat 29608485  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||   |    
T  29608484 cttgaagttttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagctttatc 29608386  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 314  Q
    |||| || ||||| ||||||| |||   |||||||||||||| ||||||||||||| | ||||| |||| ||||||   |||||||||||    
T  29608385 aacatatgggtcaaagaatgcttatattgtgttcagatccggacaaaatcgtgtcatgatttcctaaattgtgacacgtttggtgcgtac 29608296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 3258839 - 3258647
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||| |||||||||    
T  3258839 agactctccactcatatgtttcccatccccatgaatcttccccaaaaggcaccaacccttttcccaagagccccatctttttgttctccaagattcacat 3258740  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaag 217  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  3258739 catgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagttccctcctctggtttccatgagattcaccaag 3258647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 6431814 - 6431602
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||| ||||||||||||| ||| ||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||| |||||||||    
T  6431814 agactctacactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaaccctttccccaagagccccctcttttggttctccaagattcacat 6431715  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  6431714 cttgaagttttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttctatgagattcaccaagcttaccc 6431616  T
Q  225 aacaaattggtcat 238  Q
    || |||| ||||||    
T  6431615 aataaatgggtcat 6431602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 27 - 297
Target Start/End: Original strand, 4512716 - 4512985
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||| | ||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| || | ||||||||||    
T  4512716 gactctccactcatgtgtttccaaaccccatgaatcttccccaaaaggcaccaacccttt-cccaagagccccctcttttggttctctaagattcacatc 4512814  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4512815 ttgaagctttgaacctcacccaaagaccctcaacctttagaatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagcttaccca 4512913  T
Q  226 acaaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtg 297  Q
      |||| |||||| || ||| ||    ||| ||||||| | | ||||||||||||||||||| ||||||||||    
T  4512914 ttaaatgggtcatggagtgcttaaaacgtgtttcagat-ctgtcaaaatcgtgtcacgtttttccaaatcgtg 4512985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 26 - 300
Target Start/End: Original strand, 48599659 - 48599923
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    |||||||| |||||||| ||| ||| ||  ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||          |||||    
T  48599659 agactctctactcatgttttttccaaccccatgaatcttccccaaaaggcaccaacccttttcacaagagccccctcttttggtt----------cacat 48599748  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48599749 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttaccc 48599847  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgaca 300  Q
    ||||||| ||| | |||||||||||   |||||||||| ||| |||||| |||||| | |||||| ||||||||||    
T  48599848 aacaaatgggtaaaagaatgcatatattgtgttcagattcggacaaaattgtgtcatgatttccccaatcgtgaca 48599923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 26 - 285
Target Start/End: Original strand, 2361296 - 2361555
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||| ||||| |||||||||||||||||| || | || |||||||||    
T  2361296 agactctccactcatgtgtttcccaaccccatgaatcatccccaaaaggcaccaacccttttcacaagagccccctcttttgattcttcaagattcacat 2361395  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    |||||||  ||||| ||||||||||||||||||| |||||||||||| | | |||||||||| |||||||||||||||||||||||||| |||||| |||    
T  2361396 cttgaaggattgaatctcacccaaagaccctcaatctttagtatcta-aaatcctaaaagttccctcctttggtttccatgagattcactaagcttgccc 2361494  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttt 285  Q
    ||||||| ||||| ||||||| |||   ||||||||||| || |||||||||| |||||||    
T  2361495 aacaaatgggtcaaagaatgcttataatgtgttcagatctggacaaaatcgtgacacgttt 2361555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 2390125 - 2389934
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||| ||||||||||||||| ||| ||  |||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||| |||| |||||||||    
T  2390125 agactatccactcatgtgttttccaaccccatgaatcttccccaaaagccaccaacccttttcgcaatagccccctcttttggttttccaagattcacat 2390026  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  2390025 cttgaagctttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagtttcctcctttggtttccatgagattcaccaag 2389934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 4509032 - 4509237
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||        |||||    
T  4509032 gactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttt-cccaagagctccctcttttggttctc--------acatc 4509122  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  4509123 ttgaagctttgaacctcacccaaaaaccctcaacctttagtatctaaa-accctaaaagttccatcctttggtttccatgagattaaccaagcttaccca 4509221  T
Q  226 acaaattggtcataga 241  Q
    |||||| |||||||||    
T  4509222 acaaatgggtcataga 4509237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 4510874 - 4511079
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||        |||||    
T  4510874 gactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttt-cccaagagctccctcttttggttctc--------acatc 4510964  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  4510965 ttgaagctttgaacctcacccaaaaaccctcaacctttagtatctaaa-accctaaaagttccatcctttggtttccatgagattaaccaagcttaccca 4511063  T
Q  226 acaaattggtcataga 241  Q
    |||||| |||||||||    
T  4511064 acaaatgggtcataga 4511079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 27 - 231
Target Start/End: Original strand, 22328724 - 22328930
Alignment:
Q  27 gactctccactcatgtgtttcccatcc-tatgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||| |||||||| ||||||| || ||||||||| ||||||||||||||||||  |||||| |||||||||||||||||||| |||| |||| ||||    
T  22328724 gactctctactcatgtttttcccaaccctatgaatctctccccaaaaggcaccaactcttttcctaagagccccctcttttggttctccaagatttacat 22328823  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    ||||||||||| ||||||  ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||      
T  22328824 cttgaagcttttaacctccaccaaagatcctcaacctttagtatctaaataccctaaaagttttctcctttggtttccatgagattcactaagcttactt 22328923  T
Q  225 aacaaat 231  Q
    |||||||    
T  22328924 aacaaat 22328930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 128 - 291
Target Start/End: Complemental strand, 30814505 - 30814343
Alignment:
Q  128 gaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaac 227  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30814505 gaagctttgaacctcacccaaagaccctcaaccttaagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaac 30814407  T
Q  228 aaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcgtgtcacgttttcccaa 291  Q
    |||| ||||| ||||||| ||    ||| ||||||| | | ||||||||||||||||||||||||    
T  30814406 aaatgggtcaaagaatgcttaaaacgtgtttcagat-ctgtcaaaatcgtgtcacgttttcccaa 30814343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 5116453 - 5116290
Alignment:
Q  50 atcctatgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaa 148  Q
    |||| |||||||| || |||||||||||| ||| | | ||||||||||||||||||||||| || | |||||||||||||||| ||||||| ||||| ||    
T  5116453 atccaatgaatctctctccaaaaggcaccgaccctct-cccaagagccccctcttttggttctcaaagattcacatcttgaagttttgaacatcacctaa 5116355  T
Q  149 agaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcac 213  Q
    |||||||||||||||||||| || |||||||||||||  ||||||||||| ||||||||||||||    
T  5116354 agaccctcaacctttagtatttaaataccctaaaagtcccctcctttggtatccatgagattcac 5116290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 47674292 - 47674421
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||| ||||| ||||||| |||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  47674292 caaaatcatgtcatgttttccaaaatcgtgacacgtttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 47674391  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||||||||    
T  47674392 cgtgtcacgttttcccaaaatcgtgtcacg 47674421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 47676485 - 47676614
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||| |||||||||||||| |||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  47676485 caaaattgtgtcacgttttccaaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 47676584  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||||||||    
T  47676585 cgtgtcacgttttcccaaaatcgtgtcacg 47676614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 27347742 - 27347614
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||| |||||||||| |||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  27347742 caaaatcgtgtcacattttcccaaaccgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 27347643  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||  |||||||||||||||||||||    
T  27347642 catgtca-gttttcccaaaatcgtgtcacg 27347614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 2647412 - 2647283
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||| ||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  2647412 caaaatcgtatcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 2647313  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||| ||||    
T  2647312 catgtcacgttttcccaaaatcgtgacacg 2647283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 14070182 - 14070312
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaa 366  Q
    |||||||||||||||||||||||||||||||||   ||||||| ||| ||||||||||| |||||||||||| |||||| |  | | |||||| ||||||    
T  14070182 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaa 14070281  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||||||||    
T  14070282 tcgtgtcacgttttcccaaaatcgtgtcacg 14070312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 14380210 - 14380340
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaa 366  Q
    |||||||||||||||||||||||||||||||||   ||||||| ||| ||||||||||| |||||||||||| |||||| |  | | |||||| ||||||    
T  14380210 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaa 14380309  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||||||||    
T  14380310 tcgtgtcacgttttcccaaaatcgtgtcacg 14380340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 4585980 - 4585851
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||| ||||||||||||||||||   ||||||||||| ||||||||||| |||||||||||  |||||||    ||| |||||| |||||    
T  4585980 caaaatcgtgtcacattttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatattgaaaacttacccaacaagccaaaaat 4585881  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||||||| |||||||||||| ||||||||    
T  4585880 cttgtcacgttttcccaaaatagtgtcacg 4585851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 392
Target Start/End: Complemental strand, 18126463 - 18126339
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||| ||||||||||| |||||| |||||||||||||  | ||| ||||||||||||    
T  18126463 caaaatcgtgtcacgttttctcaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaacattatcctgaaaacttgcccaacaagccgaaaat 18126364  T
Q  368 cttgtcacattttcccaaaatcgtg 392  Q
    | | |||| |||| |||||||||||    
T  18126363 cgtatcacgtttttccaaaatcgtg 18126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 26417132 - 26417004
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||| ||  |||||||||||||  |||||||||||| ||||||||||| |||||||||| |||||||||  ||||| ||| |  |||||    
T  26417132 caaaatcgtgtcacgattggccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttaccctgaaaacttgtccaacaaactaaaaat 26417033  T
Q  368 cttgtcacattttcccaaaatcgtgtcac 396  Q
    | |||||||||| ||||||||||||||||    
T  26417032 cgtgtcacatttccccaaaatcgtgtcac 26417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 2761651 - 2761758
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||| ||||| ||||||||||||||  | ||||||||| ||||||    
T  2761651 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctgaaaacttgcccagcaagctgaaaat 2761750  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  2761751 cgtgtcac 2761758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 48489249 - 48489120
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||| ||||||||||| |||||||||||||   ||||||||||||||||||||||  ||||||||||||||| || |  | |||||||||| ||||     
T  48489249 caaaatcatgtcacgttttgccaaatcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcctggaagcatgcccagcaagccaaaaac 48489150  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| ||||||| |||||||||||||    
T  48489149 cgtgtcacgttttccctaaatcgtgtcacg 48489120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 4538900 - 4539029
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||  |||| |||||||||||||   ||||||||||| | ||||||||| ||||||||| ||||||||||  |   ||||| ||||||||    
T  4538900 caaaatcgtgtcatattttgccaaatcgtgacacgtttggtgcgtacgatccaaggtacgaccaaccttgtcctgaaaacttgcttagcaaaccgaaaat 4538999  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||||||||    
T  4539000 cgtgtcacgttttcccaaaatcgtgtcacg 4539029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 290 - 397
Target Start/End: Complemental strand, 2389871 - 2389764
Alignment:
Q  290 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 389  Q
    |||||||||||   |||||| |||| | ||||||||| |||||||||||||||||||||   ||||||||| ||||||| |||||||||||| |||||||    
T  2389871 aaatcgtgacacgtttggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgttcccagcaagctgaaaatcgtgtcacattttctcaaaatc 2389772  T
Q  390 gtgtcacg 397  Q
    ||||||||    
T  2389771 gtgtcacg 2389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 48491397 - 48491290
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||| ||||||||||| |||||||||||||  |||||||||||| ||||||||||| |||||||| ||| ||||| || | ||| ||||||||||||    
T  48491397 caaaatcatgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaacctaatcttgaaagcgtgcccaacaagccgaaaat 48491298  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  48491297 cgtgtcac 48491290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 21983625 - 21983704
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 348  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||    
T  21983625 caaaatcgtgtcacgttttcc-aaatcgtgacacaattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacg 21983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 268 - 392
Target Start/End: Complemental strand, 33332165 - 33332041
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||  ||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||| |||||| | | ||||||||  ||||||    
T  33332165 caaaatcgtgtcacaattgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaatgtgcccagcaagttgaaaat 33332066  T
Q  368 cttgtcacattttcccaaaatcgtg 392  Q
    | |||||| |||| |||||||||||    
T  33332065 cgtgtcacgtttttccaaaatcgtg 33332041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 407
Target Start/End: Original strand, 496343 - 496481
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||| |||||||| || |||||||||||  |||| ||||||| || ||||||| | |||||||||||||||||| | ||| |||| ||| ||||     
T  496343 caaaatcgtatcacgtttcccaaaatcgtgacacggttgatgcgtacgactcaaggtaaatccaaccttatcctgaaaatgtgtcaagcatgccaaaaac 496442  T
Q  368 cttgtcacattttcccaaaatcgtgtcacgttttgcctcc 407  Q
    | || ||| ||||||| ||||| |||||||||||||||||    
T  496443 cgtgacacgttttccc-aaatcatgtcacgttttgcctcc 496481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 23554860 - 23554729
Alignment:
Q  268 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    |||||||||||||||||||||   ||||||| ||   ||| ||||||| |||||| |||| ||||||||||||||||||| |  | |||||||| |||||    
T  23554860 caaaatcgtgtcacgttttccattaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaa 23554761  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| |||||| |||||||||||||||||||||    
T  23554760 atcgtgtcacgttttcccaaaatcgtgtcacg 23554729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 43864044 - 43863951
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    | | ||| ||||||||| |||||| |||||||||||||||||||||    
T  43864044 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactttcctaacaaaccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 43863951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 22552804 - 22552897
Alignment:
Q  65 cccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacc 160  Q
    ||||||||||||||||| |||  |||||||||||||||||||||| || | ||||||||| ||||  |||| || |||||||||||||||||||||    
T  22552804 cccaaaaggcaccaaccgttt--ccaagagccccctcttttggttctctaagattcacattttgaccctttaaatctcacccaaagaccctcaacc 22552897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 46516023 - 46515923
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||| |||||||||||||   ||||||| ||| |||||||||   ||||||||||||||||||||| | ||| |||||| |||||    
T  46516023 caaaatcgtgtcacgttttgccaaatcgtgacatgcttggtgcatacgacccaaggtgtgaccaaccttatcctgaaaacgtgcccaacaagccaaaaat 46515924  T
Q  368 c 368  Q
    |    
T  46515923 c 46515923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 49092071 - 49092203
Alignment:
Q  268 caaaatcgtgtcacgttttcc-caaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagc-cgaa 364  Q
    |||||||||||||||||||   ||||||||| || | ||||||| ||| | ||||||||| ||||||||||||||||||| ||   ||||||||  ||||    
T  49092071 caaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatacgatccaaggtacgaccaaccttatcctgaaaaacgtacccagcaagttcgaa 49092170  T
Q  365 aatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||| ||||||||||||||||||||||| ||||    
T  49092171 aatcgtgtcacattttcccaaaatcgtgacacg 49092203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 1113475 - 1113368
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||| ||||  |||||||   ||||||||||| ||||||||||| |||||||||||||||||||   | ||| || |||||||||    
T  1113475 caaaatcgtgtcacgttttgccaatacgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgcccatcaggccgaaaat 1113376  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  1113375 cgtgtcac 1113368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 4796384 - 4796255
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  | |||| |||| |   ||||||||||| | ||||||||| ||||||  ||||||||||||| | ||| ||||  ||||||    
T  4796384 caaaatcgtgtcacgtttgtctaaattgtgatacatttggtgcgtacgatccaaggtacgaccaactctatcctgaaaacgtgcccatcaagttgaaaat 4796285  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||| ||||||||||||||||    
T  4796284 cgtgtcacgtttttccaaaatcgtgtcacg 4796255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 19495789 - 19495659
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagcc-gaaaa 366  Q
    ||||||||||||||||| |||| |||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | ||||||||||  ||||    
T  19495789 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaa 19495690  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || || ||| |||||||||||| ||||||||    
T  19495689 tcgtggcacgttttcccaaaattgtgtcacg 19495659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 6570412 - 6570284
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||| ||||||||| ||  |||||||||||||  |||| ||||||  ||||||||||| | |||||||||||| |||||| ||| |||| ||| |||||    
T  6570412 caaaaacgtgtcacgattggccaaatcgtgacacggttgatgcgtatgacccaaggtacgatcaaccttatcctaaaaacgtgtcaagcatgccaaaaat 6570313  T
Q  368 cttgtcacattttcccaaaatcgtgtcac 396  Q
    | ||||||  || || ||||| |||||||    
T  6570312 cgtgtcacgattgcctaaaattgtgtcac 6570284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 8359643 - 8359699
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacc 81  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  8359643 agactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacc 8359699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 4178595 - 4178464
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    ||||||||||||||||||| ||| |||| || ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | | | |||||| |||    
T  4178595 caaaatcgtgtcacgtttttccccaatcttgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcctaacaagccaaaa 4178496  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| ||||||  ||||||||||||||||||||    
T  4178495 atcgtgtcacgatttcccaaaatcgtgtcacg 4178464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 30026391 - 30026477
Alignment:
Q  310 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||| || |||||||| ||||||||||||||| ||||| | || |||||| ||||||| |||||| ||| ||||||||| |||||||    
T  30026391 cgtacgactcaaggtacgaccaaccttatcctg-aaacgtgcccggcaagctgaaaatcgtgtcacgtttccccaaaatcatgtcacg 30026477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 2479719 - 2479796
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||| |||||||||| ||||| || ||   ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  2479719 aaaatcgtgccacgttttcc-aaatcatgccatgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 2479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 44847839 - 44847762
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| ||||||||||| ||||||||||||||||||||    
T  44847839 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 44847762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 47264026 - 47264103
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||| |||||||||| |||||||| |||  ||| | ||||| ||||||| ||| ||||||||||||||||||||    
T  47264026 aaaatcgtgccacgttttcc-aaatcgtgtcaagattgatacgtacgacccaagatacgaccaaccttatcctgaaaac 47264103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 271 - 397
Target Start/End: Original strand, 79773 - 79902
Alignment:
Q  271 aatcgtgtcacgttttc-ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagcc-gaaaat 367  Q
    ||||||||||| ||||  ||||||||||||    ||||||| ||  |||||| |||| ||||||||||||||||||| ||   ||||||||   ||||||    
T  79773 aatcgtgtcacattttgtccaaatcgtgacgtgattggtgcatatgacccaatgtacgaccaaccttatcctgaaaaacgtacccagcaagtttgaaaat 79872  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||||| ||||||||||| ||||    
T  79873 cttgtcacatttttccaaaatcgtgacacg 79902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 21989290 - 21989369
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 348  Q
    |||||||||||||| |||||| ||||| |||||   ||| ||||||  ||||||||||| | |||||||||||||||||||    
T  21989290 caaaatcgtgtcacattttcc-aaatcatgacacgattgctgcgtatgacccaaggtacgatcaaccttatcctgaaaacg 21989369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 31733311 - 31733357
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 314  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||    
T  31733311 caaaatcgtgtcacgttttcccaaatcgttacacgtttggtgcgtac 31733357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 31733354 - 31733420
Alignment:
Q  323 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 389  Q
    |||| ||||||||||||||||||||  | ||||||||||||||||  |||||| ||| || ||||||    
T  31733354 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaattgtgtcacgtttccctaaaatc 31733420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 479
Target Start/End: Complemental strand, 48491250 - 48491208
Alignment:
Q  437 tcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 479  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  48491250 tcgtgacacggttgccaaatcgtgtcacgattcttcactttct 48491208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 24515110 - 24515187
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    |||||||||| |||||| ||| ||||||| ||   ||| ||||||| | ||||||||| |||||||||||||||||||    
T  24515110 aaatcgtgtcgcgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 24515187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 479
Target Start/End: Original strand, 34311334 - 34311379
Alignment:
Q  434 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 479  Q
    |||||||||||||  || ||||||||||||||||||||| ||||||    
T  34311334 aaatcgtgacacgtttgccaaatcgtgtcacgattcttcactttct 34311379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 30025081 - 30025113
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgaca 300  Q
    ||||||||||||||||||| |||||||||||||    
T  30025081 caaaatcgtgtcacgttttgccaaatcgtgaca 30025113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 9e-96; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 26 - 393
Target Start/End: Original strand, 35447209 - 35447575
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatc-catgattcaca 123  Q
    ||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||| ||||| |||||||||| |||||||||| || || || |||||    
T  35447209 agactctccactcatgtgtttcccaaccccatgaatctttcccaaaaggcaccaacccttttcacaagagcccc-tcttttggttctctcaagactcaca 35447307  T
Q  124 tcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacc 223  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  35447308 tcttgaagctttgaacctcacacaaatactctcaacctttagtatctaaa-accctaaaagttctctcctttggtttccatgagattcaccaagcttacc 35447406  T
Q  224 caacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaagg 323  Q
    |||||||| |||||| || ||| ||   ||||||||||||||| ||||||||||||||| |||||| ||||||||||   ||||||||||| ||||||||    
T  35447407 caacaaatgggtcatggagtgcttacatagtgttcagatccggacaaaatcgtgtcacgatttccc-aatcgtgacacgtttggtgcgtacgacccaagg 35447505  T
Q  324 tacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgt 393  Q
    ||| | |||||||||| |||||||  | ||  ||| |||| |||| ||||||||||||||||||||||||    
T  35447506 tacgagcaaccttatcttgaaaacttgcccgacaaaccgataatcgtgtcacattttcccaaaatcgtgt 35447575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 27 - 292
Target Start/End: Complemental strand, 45726771 - 45726507
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||||| | ||  ||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||| ||||||||||    
T  45726771 gactctccactcatgtgtttccaaaccccatgaatcttccccaaaaggcaccaacccttt-cccaagagctccctcttttggttctccaagattcacatc 45726673  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  45726672 ttgaagctttgaacctcacccaaagactctcaacctttagtatcta-aaaccctaaaagttccctcatttggtttccatgagattcaccaagcttaccca 45726574  T
Q  226 acaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaa 292  Q
    |||||| |||||| || ||| ||   ||||||||||||||  |||||||||||||| ||| ||||||    
T  45726573 acaaatgggtcatggagtgcttacatagtgttcagatccgaacaaaatcgtgtcacatttgcccaaa 45726507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 26 - 238
Target Start/End: Original strand, 1632057 - 1632269
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||  ||| |||||||||    
T  1632057 agactctccactcatgtgtttcccaaccccatgaatcttccccaaaagacaccaacccttttcacaagagccccctcttttggttccccaagattcacat 1632156  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  1632157 cttgaagctttgaacctcactcaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacac 1632255  T
Q  225 aacaaattggtcat 238  Q
    ||||||| ||||||    
T  1632256 aacaaataggtcat 1632269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 39 - 281
Target Start/End: Original strand, 42261947 - 42262190
Alignment:
Q  39 atgtgtttccca-tcctatgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttg 136  Q
    |||||||||||| ||| |||||||| || || ||||||||||||| | | || ||||||||||| |||||||| |||| |||||||||||||||||||||    
T  42261947 atgtgtttcccaatcccatgaatctctcacctaaaggcaccaaccctct-ccaaagagcccccttttttggttctccaagattcacatcttgaagctttg 42262045  T
Q  137 aacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtc 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||||||| | |||||||| ||||    
T  42262046 aacctcacccaaagaccctcaacctttagtatctacataccctaaaagctccctcctttggttctcatgagattcaccaagcttgctcaacaaatgggtc 42262145  T
Q  237 atagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcac 281  Q
    | || |||| |||  |||||||||||||  |||||||||||||||    
T  42262146 aaaggatgcttatatagtgttcagatccaagcaaaatcgtgtcac 42262190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 26 - 220
Target Start/End: Original strand, 42288435 - 42288628
Alignment:
Q  26 agactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | || |||||||||    
T  42288435 agactctccactcatgtgtttcccaaccccatgaatcttccc-aaaaggcaccaacccttttcccaagagccccctcttttggttcttcaagattcacat 42288533  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagctt 220  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||  ||| |||||||||||||||||||||| |||||    
T  42288534 cttgaagttttgaacctcacccaaagaccctcaacctttagtatcta-aaaccctaaaagttctctcatttggtttccatgagattcacctagctt 42288628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 36 - 238
Target Start/End: Complemental strand, 17450423 - 17450222
Alignment:
Q  36 ctcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctt 134  Q
    ||||||||||||||||||  ||||||||| | |||| |||||||||| ||| ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  17450423 ctcatgtgtttcccatccccatgaatctttcacaaagggcaccaacccttt-cccaagagccccctcttttggttctccaagattcacatcttgaagctt 17450325  T
Q  135 tgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattgg 234  Q
    |||||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| | ||| || |||||||||| ||    
T  17450324 tgaacctcactcaaagaccctcaacctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattctctaagtttgcccaacaaatggg 17450226  T
Q  235 tcat 238  Q
    ||||    
T  17450225 tcat 17450222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 27 - 230
Target Start/End: Complemental strand, 7451142 - 7450940
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatc 125  Q
    |||||||||||||||||||| ||| ||  || ||||||| ||||||| || ||||| ||| || |||||||||||||||||||| |||| ||||||||||    
T  7451142 gactctccactcatgtgttttccaaccccataaatcttctccaaaagtcatcaaccctttaccaaagagccccctcttttggttctccaagattcacatc 7451043  T
Q  126 ttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccca 225  Q
     |||||||||||||||||||||||||| | |||||||||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  7451042 ctgaagctttgaacctcacccaaagacgc-caacctttagtatcta-aaaccctaaaagttccctccttttgtttccatgagattcaccaagcttaccca 7450945  T
Q  226 acaaa 230  Q
    |||||    
T  7450944 acaaa 7450940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 27 - 282
Target Start/End: Complemental strand, 24397900 - 24397651
Alignment:
Q  27 gactctccactcatgtgtttcccatcct-atgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    |||||||||||||||||||| ||| ||  |||| ||| |||| |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  24397900 gactctccactcatgtgtttaccagcccgatgagtctctccctaaaaggcaccaacccttttcccaagagccccctcttttggttctccaagattcacat 24397801  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccc 224  Q
     ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||  ||    
T  24397800 tttgaagctttgaacctcacacaaagaccgtcaacctttagtatctaaataccctaaaag--------tttggtttccatgagattcaccaagcttttcc 24397709  T
Q  225 aacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacg 282  Q
    |||||||  | || || |||| |||  ||||||||||||| | ||||| |||||||||    
T  24397708 aacaaatgagccaaaggatgcttatatagtgttcagatccagacaaaaccgtgtcacg 24397651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 27 - 220
Target Start/End: Complemental strand, 33648012 - 33647817
Alignment:
Q  27 gactctccactcatgtgtttcccatccta-tgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    ||||||| |||||| ||||| ||| |||  ||||||| ||| ||||||||||||||| |||||||||||||| ||||||||| || |||| |||||||||    
T  33648012 gactctctactcatatgttttccaacctcgtgaatctctcctcaaaaggcaccaacccttttcccaagagcctcctcttttgattctccaagattcacat 33647913  T
Q  125 cttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagctt 220  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||  |||||||||||||||||| |||||||||||||    
T  33647912 cttgaaactttgaacctcacccaaagaccttcaacctttagtatctaaatactctaaaagttctctcctttggtttccatgaaattcaccaagctt 33647817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 102 - 282
Target Start/End: Original strand, 30218435 - 30218615
Alignment:
Q  102 ttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttc 201  Q
    |||||||| |||| ||||||||| |||| | ||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||||||  |||    
T  30218435 ttttggttgtccaagattcacattttgatgttttgaacctcacccaaagaccctcaacatatagtatctaaataccctaaaagttccctcctttgagttc 30218534  T
Q  202 catgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacg 282  Q
    ||| | |||||||||| ||||||||| ||| ||||| |  |||| |||  ||||| || ||||  |||||||| |||||||    
T  30218535 cataatattcaccaagattacccaacgaataggtcaaatgatgcttatatagtgtccatatccacgcaaaatcatgtcacg 30218615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 2837193 - 2837322
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||| ||||||||||||||| |||||   ||||||||||| ||||||||||| ||||||||||||||||||||    ||||||||  ||||||    
T  2837193 caaaatcgtgttacgttttcccaaatcatgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttacccagcaaggtgaaaat 2837292  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||||||||    
T  2837293 cgtgtcacgttttcccaaaatcgtgtcacg 2837322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 34389233 - 34389362
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  34389233 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 34389331  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||||||||    
T  34389332 tcgtgtcacgttttcccaaaatcgtgtcacg 34389362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 36318358 - 36318488
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    |||||||||||||||||||  ||||| ||||||  |||||||||||| |  |||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  36318358 caaaatcgtgtcacgttttgtcaaattgtgacacggttggtgcgtacgattcaaggtacgaccaaccttatcctgaaaacgtggccagcaagccgaaaat 36318457  T
Q  368 cttgtcacattttccc-aaaatcgtgtcacg 397  Q
    | |||||| ||| ||| ||||||||||||||    
T  36318458 cgtgtcacgtttccccaaaaatcgtgtcacg 36318488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 20522604 - 20522733
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  |||||| ||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  20522604 caaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 20522703  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| ||||| |||||||||| ||||    
T  20522704 cgtgtcacgttttctcaaaatcgtgacacg 20522733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 392
Target Start/End: Complemental strand, 14698724 - 14698600
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  ||||||||||| |  |||||||||||| ||||||||||| ||||||||||||||||||| | | ||| ||||  ||||||    
T  14698724 caaaatcgtgtcacgtttgtccaaatcgtgaaatggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgcccaacaagttgaaaat 14698625  T
Q  368 cttgtcacattttcccaaaatcgtg 392  Q
    | |||||| ||||||||||||||||    
T  14698624 cgtgtcacgttttcccaaaatcgtg 14698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 21630327 - 21630456
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||||  |||||||||||||   |||||| |||| |||||| |||| ||||||||||||||||||||| | ||||||||  ||||||    
T  21630327 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 21630426  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||  |||||||||||| ||| ||||    
T  21630427 cgtgtcatgttttcccaaaattgtgacacg 21630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 363 - 477
Target Start/End: Original strand, 1632300 - 1632413
Alignment:
Q  363 aaaatcttgtcacattttcccaaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtc 462  Q
    |||||| |||||| |||||| |||||||||||||||||||||| ||| | ||| ||| |||||  |||||||||||||||||||| || |||| ||||||    
T  1632300 aaaatcgtgtcacgttttcc-aaaatcgtgtcacgttttgccttcagaatcaaacattcattcggcatcagaaatcgtgacacggttgccaaaacgtgtc 1632398  T
Q  463 acgattcttcgcttt 477  Q
    |||||||||| ||||    
T  1632399 acgattcttcacttt 1632413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 269 - 397
Target Start/End: Complemental strand, 33528338 - 33528209
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 367  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| | ||||||||| |||||||||   ||||||||   ||||||    
T  33528338 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgatcaaccttattctgaaaacgtacccagcaagtttgaaaat 33528239  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    | |||||| |||||||||||||||| ||||    
T  33528238 cgtgtcacgttttcccaaaatcgtgacacg 33528209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 40935542 - 40935690
Alignment:
Q  62 ttccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacct 161  Q
    |||||||| ||||||||||| ||| |||||||||| | |||||||||| |||  ||||||||| | ||  ||||||| ||| ||||||| ||||||||||    
T  40935542 ttccccaataggcaccaacccttt-cccaagagcctcatcttttggttctcctagattcacatttggacactttgaatctctcccaaaggccctcaacct 40935640  T
Q  162 ttagtatctacataccctaaaagtttcctcctttggtttccatgagattc 211  Q
    ||||| ||||  | ||||||| | |  |||||||||||||||||||||||    
T  40935641 ttagtttctaagttccctaaacggtctctcctttggtttccatgagattc 40935690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 392
Target Start/End: Complemental strand, 10706967 - 10706843
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    ||||||||||||||||||||| ||| |||| ||   |||||| |||| ||||||||||| |||||||||||||| ||||||  |||||||||   |||||    
T  10706967 caaaatcgtgtcacgttttcc-aaaccgtggcacgattggtgtgtacgacccaaggtacgaccaaccttatccttaaaacgtatccagcaagtttgaaaa 10706869  T
Q  367 tcttgtcacattttcccaaaatcgtg 392  Q
    || |||||| ||||||||||||||||    
T  10706868 tcgtgtcacgttttcccaaaatcgtg 10706843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 17865595 - 17865684
Alignment:
Q  304 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtcacattttcccaaaatcgtg 392  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   ||||||| |||||||||||||||||||||||    
T  17865595 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtg 17865684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 36988423 - 36988554
Alignment:
Q  268 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaa 365  Q
    |||||||||||||| ||||||   ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||| |||||  | |||||||| |||||    
T  36988423 caaaatcgtgtcacattttccatcaatcgtgtcacaattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaa 36988522  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| |||||| ||||||||||||| |||||||    
T  36988523 atcgtgtcacgttttcccaaaatcatgtcacg 36988554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 45099575 - 45099444
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| |  |||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  45099575 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 45099476  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| ||||||| ||||||||||| ||||||||    
T  45099475 atcgtgtcacaatttcccaaaattgtgtcacg 45099444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 39483258 - 39483388
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    |||||| ||| |||||||  |||||||||||||   ||||||||||  ||||||||||| |||||||||||||||||||||   ||| ||||   |||||    
T  39483258 caaaattgtgccacgtttgtccaaatcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaa 39483357  T
Q  367 tcttgtcacattttcccaaaatcgtgtcacg 397  Q
    || |||||| |||||||||||||||| ||||    
T  39483358 tcgtgtcacgttttcccaaaatcgtgacacg 39483388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 268 - 392
Target Start/End: Complemental strand, 23078186 - 23078062
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    |||||| |||||||||||||| |||||||| ||   ||||||||||| ||||||| ||| |||||||||||||||||||||   ||| ||||   |||||    
T  23078186 caaaattgtgtcacgttttcc-aaatcgtggcacgattggtgcgtacgacccaagatacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaa 23078088  T
Q  367 tcttgtcacattttcccaaaatcgtg 392  Q
    || |||||| ||||||||||||||||    
T  23078087 tcgtgtcacgttttcccaaaatcgtg 23078062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 33118517 - 33118646
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||||| ||||  |||||||||||||   ||||||||||| |||||||||||  ||||||||||| |||||| | | ||||||||  ||||||    
T  33118517 caaaatcgtgtcatgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacggccaaccttatcttgaaaatgtgcccagcaagttgaaaat 33118616  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
      |||||| |||||| |||| |||| ||||    
T  33118617 tgtgtcacgttttcctaaaaacgtgacacg 33118646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 5723604 - 5723711
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  |||||||||||| |||||    
T  5723604 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgtccagcaagccaaaaat 5723703  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  5723704 cgtgtcac 5723711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 8389864 - 8389733
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaag-ccgaaa 365  Q
    ||||||||||||| ||||| ||||||| |||||   ||||||||||| |||||||||||  |||||||||||||| ||||||    |||||||   ||||    
T  8389864 caaaatcgtgtcatgtttttccaaatcatgacatgattggtgcgtacgacccaaggtacgtccaaccttatcctgaaaaacgtactcagcaagtttgaaa 8389765  T
Q  366 atcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||| |||||| |||||||||||||||| ||||    
T  8389764 atcgtgtcacgttttcccaaaatcgtgacacg 8389733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 39284661 - 39284587
Alignment:
Q  323 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||| ||||||||||||||||||||    ||||||||||||||||  |||||| |||||||||||||||||||||    
T  39284661 gtacgaccaaccttatcctgaaaactttcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacg 39284587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 2334767 - 2334874
Alignment:
Q  270 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 367  Q
    ||||||||||||||||| ||||||||||| ||   ||| || |||| ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||    
T  2334767 aaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgtgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaat 2334866  T
Q  368 cttgtcac 375  Q
    | ||||||    
T  2334867 cgtgtcac 2334874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 29867644 - 29867569
Alignment:
Q  323 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||||||||||||||| |||||| |  | |||||||| |||||||| |||||| |||||||||||||||||||||    
T  29867644 gtacaaccaaccttatcttgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 29867569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 346
Target Start/End: Original strand, 36206013 - 36206092
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||||| ||||||||| |||||||||||||||||||    
T  36206013 caaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacaatccaaggtacgaccaaccttatcctgaaaa 36206092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 28258891 - 28258814
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||| |||||||||| |||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  28258891 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 28258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 4503480 - 4503589
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 365  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  4503480 caaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 4503579  T
Q  366 atcttgtcac 375  Q
    ||| ||||||    
T  4503580 atcgtgtcac 4503589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 24197731 - 24197643
Alignment:
Q  36 ctcatgtgtttcccatcctatgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacat 124  Q
    |||||||||||||||||| || | ||  ||||||||||||||||||| | | |||||||| ||||||||||||||  ||| |||||||||    
T  24197731 ctcatgtgtttcccatcccatcattccctccccaaaaggcaccaaccctct-cccaagagtcccctcttttggttccccaagattcacat 24197643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 17629082 - 17629022
Alignment:
Q  385 aaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacac 445  Q
    ||||||||||||| ||||||||||||| ||||| | |||||  | ||||||||||||||||    
T  17629082 aaatcgtgtcacgatttgcctccaggatcaaccttacattctgcctcagaaatcgtgacac 17629022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 6595406 - 6595473
Alignment:
Q  331 aaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||||||||||||||| |  | |||||||||| |||||| |||||| |||||||||||| ||||||||    
T  6595406 aaccttatcctgaaaatctagcccagcaagccaaaaatcgtgtcacgttttcccaaaattgtgtcacg 6595473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 346
Target Start/End: Original strand, 13569712 - 13569789
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 346  Q
    |||||||||||||  |||| |||||||||||||   ||||||| ||| | ||||||||| | |||||||||||||||||    
T  13569712 caaaatcgtgtcaaatttttccaaatcgtgacacgattggtgcttacgatccaaggtacga-caaccttatcctgaaaa 13569789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 297
Target Start/End: Complemental strand, 7450906 - 7450877
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtg 297  Q
    ||||||||||||||||||||||||||||||    
T  7450906 caaaatcgtgtcacgttttcccaaatcgtg 7450877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 44750273 - 44750240
Alignment:
Q  189 ctcctttggtttccatgagattcaccaagcttac 222  Q
    ||||||||||||| ||||||||||||||||||||    
T  44750273 ctcctttggtttctatgagattcaccaagcttac 44750240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 479
Target Start/End: Complemental strand, 45726460 - 45726415
Alignment:
Q  434 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 479  Q
    |||||||||||||| || |||||||||||||| |||||| ||||||    
T  45726460 aaatcgtgacacggttgccaaatcgtgtcacgtttcttcactttct 45726415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 300
Target Start/End: Complemental strand, 39284704 - 39284672
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgaca 300  Q
    ||||||| |||||||||||||||||||||||||    
T  39284704 caaaatcatgtcacgttttcccaaatcgtgaca 39284672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 129; Significance: 2e-66; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 39 - 281
Target Start/End: Original strand, 490782 - 491025
Alignment:
Q  39 atgtgtttccca-tcctatgaatct-tccccaaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatcttgaagctttg 136  Q
    |||||||||||| ||| |||||||| || || ||||||||||||| | | || ||||||||||| |||||||| |||| |||||||||||||||||||||    
T  490782 atgtgtttcccaatcccatgaatctctcacctaaaggcaccaaccctct-ccaaagagcccccttttttggttctccaagattcacatcttgaagctttg 490880  T
Q  137 aacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaattggtc 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||||||| | |||||||| ||||    
T  490881 aacctcacccaaagaccctcaacctttagtatctacataccctaaaagctccctcctttggttctcatgagattcaccaagcttgctcaacaaatgggtc 490980  T
Q  237 atagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcac 281  Q
    | || |||| |||  |||||||||||||  |||||||||||||||    
T  490981 aaaggatgcttatatagtgttcagatccaagcaaaatcgtgtcac 491025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 434353 - 434221
Alignment:
Q  268 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagcc-gaa 364  Q
    |||||||||| |||||||| ||| ||||||| ||   ||  ||||||| | ||||||||| ||||||||||||||||||| |  | ||||||||||  ||    
T  434353 caaaatcgtgccacgtttttccccaatcgtgccacgatttatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 434254  T
Q  365 aatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    |||| ||||||  ||||||||||||||||||||    
T  434253 aatcgtgtcacgatttcccaaaatcgtgtcacg 434221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 231
Target Start/End: Original strand, 18328 - 18530
Alignment:
Q  28 actctccactcatgtgtttcccatcctatgaatcttcccc-aaaaggcaccaacctttttcccaagagccccctcttttggttatccatgattcacatct 126  Q
    ||||||||||||||||||| | | |  ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||    
T  18328 actctccactcatgtgttttcaacctcatgaatcttcccccaaaaggcaccaacccttttcacaagagccccctctttttgttctccaagattcacatct 18427  T
Q  127 tgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaa 226  Q
    |||||||||||||||||||||||||||| |||||||||||||||  | | |||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  18428 tgaagctttgaacctcacccaaagacccgcaacctttagtatct--aaaacctataagttttctcctttggtttccatgagattcacccagcttacccaa 18525  T
Q  227 caaat 231  Q
    |||||    
T  18526 caaat 18530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 290 - 397
Target Start/End: Original strand, 17635 - 17742
Alignment:
Q  290 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 389  Q
    |||||||||||   ||||||||||| || || ||||| |||||||||||| ||||| |  | |||||||||| |||||| |||||| |||||||||||||    
T  17635 aaatcgtgacacgtttggtgcgtacgactcagggtacgaccaaccttatcatgaaagcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatc 17734  T
Q  390 gtgtcacg 397  Q
    ||||||||    
T  17735 gtgtcacg 17742  T

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Target: scaffold0197 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 1792 - 1942
Alignment:
Q  87 cccaagagccccctcttttggttatccatgattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatctacataccctaaaagtt 186  Q
    |||||||| |||||||||||||| | || ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  1792 cccaagagtcccctcttttggttcttcaagattcacatcttgaagctttggagctcacccaaagaccttcaacctttagtatctaaataccctaaaagtt 1891  T
Q  187 tcctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 237  Q
      ||| |||||||||||| | |||||||||| ||||  ||||||| |||||    
T  1892 ctctcatttggtttccataaaattcaccaagtttacttaacaaataggtca 1942  T

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Target: scaffold0066 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 395
Target Start/End: Original strand, 20764 - 20891
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 367  Q
    ||||||||||| ||||||| |||||||||||||   || |||||||| ||||||||||| ||||||||||| || |||||    ||| ||||||||||||    
T  20764 caaaatcgtgttacgttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtacgaccaaccttattctaaaaactttcccaacaagccgaaaat 20863  T
Q  368 cttgtcacattttcccaaaatcgtgtca 395  Q
    | |||||| |||||||||||||||||||    
T  20864 cgtgtcacgttttcccaaaatcgtgtca 20891  T

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Target: scaffold0006 (Bit Score: 59; Significance: 9e-25; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 6067 - 6189
Alignment:
Q  268 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 366  Q
    ||||||||||||||||||  |||||| ||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  6067 caaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 6166  T
Q  367 tcttgtcacattttcccaaaatc 389  Q
    || ||||||||||||||||||||    
T  6167 tcgtgtcacattttcccaaaatc 6189  T

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Target: scaffold0006; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 269 - 397
Target Start/End: Original strand, 2876 - 3005
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 367  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||    ||||||||   ||||||    
T  2876 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatacccagcaagtttgaaaat 2975  T
Q  368 cttgtcacattttcccaaaatcgtgtcacg 397  Q
    |  ||||| |||||||||||||||| ||||    
T  2976 cgggtcacgttttcccaaaatcgtgacacg 3005  T

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Target: scaffold0006; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 132993 - 132916
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| ||||||||||| ||||||||||||||||||||    
T  132993 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 132916  T

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Target: scaffold0006; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 149455 - 149539
Alignment:
Q  310 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 397  Q
    ||||| ||||| ||||| |||||||||||   |  |||| ||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  149455 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacg 149539  T

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Target: scaffold0087 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 402
Target Start/End: Complemental strand, 36546 - 36413
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 367  Q
    ||||||||| |||||||||| |||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   ||||||    
T  36546 aaaatcgtgccacgttttcc-aaatcgtgccatgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaat 36448  T
Q  368 cttgtcacattttcccaaaatcgtgtcacgttttg 402  Q
      |||||| ||||| |||||||||| |||| ||||    
T  36447 tgtgtcacgttttcacaaaatcgtgccacgatttg 36413  T

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Target: scaffold0087; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 43675 - 43598
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||| |||||||||| |||||||| ||   ||| | | ||| ||||||||||| ||||||||||||||||||||    
T  43675 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatacatacgacccaaggtacgaccaaccttatcctgaaaac 43598  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Complemental strand, 114365 - 114278
Alignment:
Q  308 tgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtca 395  Q
    ||||||| ||||||||||| |||||||||||||||||||    | |||||||||| |||||| |||||| ||||||||| |||||||||    
T  114365 tgcgtacgacccaaggtaccaccaaccttatcctgaaaattttgcccagcaagcc-aaaatcgtgtcacgttttcccaatatcgtgtca 114278  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 45582 - 45659
Alignment:
Q  269 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||||||| |||||||||| |||||||| ||   ||| |  |||| ||||||||||| ||||||||||||||||||||    
T  45582 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaac 45659  T

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Target: scaffold0140 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 8091 - 8054
Alignment:
Q  310 cgtacaacccaaggtacaaccaaccttatcctgaaaac 347  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  8091 cgtacgacccaaggtacgaccaaccttatcctgaaaac 8054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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