View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7280_low_11 (Length: 308)
Name: NF7280_low_11
Description: NF7280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7280_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 20 - 297
Target Start/End: Original strand, 3413728 - 3414005
Alignment:
| Q |
20 |
agactgatataagcataaataaggattagttcattgtcatttgtaataccaaccaacattacatccatatcatgatatcaatataaattataaaatttta |
119 |
Q |
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| T |
3413728 |
agactgatataagcataaataaggattagttcattgtcatttgtaataccaaccaacattacatccatatcatgatatcaatataaattataaaatttta |
3413827 |
T |
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| Q |
120 |
ttattctaagaatttattttcatctctgtacctaaaggactaatcccacaacttcaatggtgtaaagagagggctatgtacgatgaacaaacatctccat |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
3413828 |
ttattctaagaatttattttcatctctgtacctaaaggactaatcccacaacttcaatggtgtaaagagagggctatgtacgatgaacaaacatctcaat |
3413927 |
T |
|
| Q |
220 |
cctacattatttcctcacttcaaaacttagcagcacacctgtaacataaaactaatcagaaaaatcttcattaagaat |
297 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
3413928 |
cctacattatttcctcacttcaaaacttagcagcacatctgtaacataaaactaatcagaaaaatcttcattaagaat |
3414005 |
T |
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