View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7280_low_5 (Length: 383)

Name: NF7280_low_5
Description: NF7280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7280_low_5
NF7280_low_5
[»] chr6 (38 HSPs)
chr6 (43-374)||(26661290-26661621)
chr6 (43-374)||(26767261-26767592)
chr6 (8-243)||(21593138-21593373)
chr6 (2-243)||(3809164-3809402)
chr6 (2-131)||(17762571-17762700)
chr6 (7-143)||(26830584-26830721)
chr6 (114-243)||(22964080-22964209)
chr6 (114-243)||(23824184-23824313)
chr6 (114-235)||(24435566-24435687)
chr6 (2-65)||(5043278-5043341)
chr6 (2-77)||(22425282-22425356)
chr6 (114-243)||(31979899-31980028)
chr6 (2-140)||(25072759-25072899)
chr6 (114-235)||(18234465-18234587)
chr6 (150-243)||(603622-603715)
chr6 (154-243)||(9183399-9183488)
chr6 (118-255)||(26954656-26954792)
chr6 (1-63)||(2973393-2973456)
chr6 (114-237)||(10076783-10076906)
chr6 (114-192)||(31086110-31086189)
chr6 (114-192)||(5017133-5017211)
chr6 (150-243)||(5571850-5571943)
chr6 (176-243)||(17759427-17759494)
chr6 (114-239)||(33211534-33211658)
chr6 (116-192)||(16452679-16452756)
chr6 (116-192)||(16452790-16452867)
chr6 (114-243)||(21272575-21272704)
chr6 (116-221)||(5406548-5406655)
chr6 (116-221)||(5410873-5410980)
chr6 (114-221)||(30834884-30834994)
chr6 (116-243)||(5411583-5411712)
chr6 (129-221)||(5413812-5413905)
chr6 (116-191)||(31405024-31405100)
chr6 (61-131)||(603553-603623)
chr6 (154-243)||(5407297-5407387)
chr6 (114-232)||(24714754-24714872)
chr6 (114-221)||(33160702-33160811)
chr6 (280-324)||(21593058-21593102)
[»] scaffold0286 (1 HSPs)
scaffold0286 (2-243)||(11030-11271)
[»] chr4 (66 HSPs)
chr4 (2-243)||(6655428-6655669)
chr4 (8-237)||(50674307-50674536)
chr4 (2-243)||(26363737-26363978)
chr4 (2-243)||(27417406-27417647)
chr4 (2-243)||(40630456-40630697)
chr4 (2-243)||(54882512-54882733)
chr4 (114-243)||(34570763-34570892)
chr4 (2-233)||(50263153-50263383)
chr4 (2-243)||(2209192-2209421)
chr4 (121-243)||(9927817-9927939)
chr4 (65-243)||(41639037-41639215)
chr4 (114-239)||(37740320-37740445)
chr4 (2-128)||(55085821-55085946)
chr4 (114-243)||(36314816-36314945)
chr4 (114-243)||(36329025-36329154)
chr4 (8-131)||(46570007-46570130)
chr4 (114-243)||(5429370-5429499)
chr4 (114-221)||(54200255-54200362)
chr4 (2-76)||(8653239-8653313)
chr4 (2-76)||(8665046-8665120)
chr4 (114-243)||(8689082-8689211)
chr4 (2-76)||(10071524-10071598)
chr4 (114-243)||(25861618-25861748)
chr4 (115-243)||(5268785-5268914)
chr4 (114-243)||(54867561-54867690)
chr4 (2-66)||(12073042-12073106)
chr4 (2-64)||(46703152-46703214)
chr4 (115-243)||(5143644-5143772)
chr4 (114-243)||(6743001-6743130)
chr4 (136-243)||(12745787-12745895)
chr4 (2-77)||(22883207-22883283)
chr4 (2-77)||(22934871-22934947)
chr4 (114-192)||(16622931-16623008)
chr4 (169-243)||(35661911-35661985)
chr4 (229-318)||(8653111-8653200)
chr4 (229-318)||(8664918-8665007)
chr4 (216-291)||(10071403-10071477)
chr4 (2-76)||(33989501-33989576)
chr4 (118-243)||(5148064-5148189)
chr4 (114-192)||(16628510-16628587)
chr4 (2-87)||(41964044-41964130)
chr4 (162-243)||(52095757-52095839)
chr4 (154-243)||(46570133-46570222)
chr4 (114-221)||(29254206-29254313)
chr4 (2-68)||(35370792-35370859)
chr4 (128-243)||(36994250-36994365)
chr4 (169-243)||(26176028-26176102)
chr4 (1-77)||(26699901-26699978)
chr4 (2-63)||(35662094-35662155)
chr4 (2-65)||(379028-379092)
chr4 (169-243)||(56179028-56179103)
chr4 (114-248)||(3909782-3909915)
chr4 (2-58)||(38811533-38811590)
chr4 (23-83)||(3785722-3785782)
chr4 (2-83)||(35369894-35369971)
chr4 (150-243)||(3777966-3778060)
chr4 (21-83)||(25723690-25723752)
chr4 (116-192)||(52083007-52083084)
chr4 (116-192)||(52094014-52094091)
chr4 (169-243)||(5370479-5370554)
chr4 (150-193)||(5396327-5396370)
chr4 (155-242)||(24968801-24968888)
chr4 (21-68)||(47514976-47515023)
chr4 (280-325)||(26363656-26363701)
chr4 (169-240)||(12739942-12740014)
chr4 (169-240)||(12748148-12748220)
[»] chr3 (64 HSPs)
chr3 (2-243)||(4569423-4569664)
chr3 (8-243)||(43404194-43404429)
chr3 (8-243)||(55302426-55302660)
chr3 (2-242)||(6096054-6096295)
chr3 (2-243)||(43402245-43402486)
chr3 (2-243)||(36018334-36018564)
chr3 (5-243)||(31340499-31340739)
chr3 (7-243)||(40912809-40913046)
chr3 (2-243)||(54593176-54593418)
chr3 (2-243)||(49199926-49200147)
chr3 (114-243)||(29812753-29812882)
chr3 (114-243)||(5236806-5236935)
chr3 (2-243)||(34490704-34490926)
chr3 (2-84)||(28074248-28074330)
chr3 (114-243)||(40592357-40592486)
chr3 (114-243)||(29810558-29810687)
chr3 (209-318)||(30235616-30235724)
chr3 (114-243)||(8127012-8127141)
chr3 (150-243)||(44331259-44331352)
chr3 (114-238)||(1735884-1736008)
chr3 (114-205)||(24694779-24694870)
chr3 (2-143)||(30235696-30235838)
chr3 (114-243)||(8370064-8370193)
chr3 (130-243)||(46173206-46173318)
chr3 (116-235)||(40845037-40845157)
chr3 (8-76)||(47303891-47303959)
chr3 (115-243)||(48438598-48438727)
chr3 (2-128)||(34795456-34795583)
chr3 (114-243)||(16264731-16264860)
chr3 (114-243)||(36029475-36029605)
chr3 (114-243)||(39032130-39032259)
chr3 (114-192)||(47923530-47923608)
chr3 (116-243)||(7761954-7762082)
chr3 (114-243)||(44331796-44331925)
chr3 (2-66)||(41819976-41820040)
chr3 (23-77)||(5434355-5434409)
chr3 (114-192)||(30709423-30709501)
chr3 (116-243)||(7764141-7764270)
chr3 (8-83)||(35139174-35139250)
chr3 (114-243)||(5258492-5258623)
chr3 (114-243)||(9636476-9636607)
chr3 (2-76)||(26323967-26324042)
chr3 (114-243)||(27027088-27027218)
chr3 (114-243)||(40735117-40735248)
chr3 (231-318)||(47303763-47303850)
chr3 (116-194)||(23410681-23410759)
chr3 (150-238)||(27038459-27038548)
chr3 (2-65)||(46860120-46860184)
chr3 (7-77)||(39127197-39127268)
chr3 (134-243)||(21711603-21711713)
chr3 (114-192)||(40734239-40734317)
chr3 (116-243)||(45094853-45094982)
chr3 (156-243)||(16498756-16498840)
chr3 (114-191)||(25929023-25929100)
chr3 (280-325)||(31340775-31340820)
chr3 (279-325)||(34490623-34490669)
chr3 (115-193)||(37726058-37726135)
chr3 (279-325)||(44331177-44331223)
chr3 (114-160)||(51398587-51398633)
chr3 (198-243)||(3393296-3393341)
chr3 (156-193)||(37408199-37408236)
chr3 (169-242)||(51398517-51398590)
chr3 (156-192)||(27974579-27974615)
chr3 (150-194)||(35925908-35925952)
[»] scaffold0466 (1 HSPs)
scaffold0466 (2-194)||(6848-7041)
[»] scaffold0014 (1 HSPs)
scaffold0014 (10-243)||(80746-80979)
[»] chr8 (33 HSPs)
chr8 (2-243)||(42435446-42435687)
chr8 (2-221)||(4283040-4283259)
chr8 (2-243)||(22976006-22976247)
chr8 (114-243)||(30143032-30143161)
chr8 (114-243)||(4731348-4731477)
chr8 (7-243)||(40221236-40221453)
chr8 (117-243)||(15212476-15212602)
chr8 (2-242)||(11383479-11383699)
chr8 (2-77)||(44353433-44353508)
chr8 (114-243)||(43036113-43036242)
chr8 (136-243)||(27810988-27811095)
chr8 (114-243)||(12702987-12703117)
chr8 (136-243)||(4733515-4733622)
chr8 (114-243)||(5702065-5702195)
chr8 (114-243)||(1345718-1345848)
chr8 (114-243)||(1746566-1746697)
chr8 (116-243)||(34256854-34256983)
chr8 (120-243)||(4743548-4743672)
chr8 (116-243)||(19175318-19175445)
chr8 (114-190)||(33351893-33351969)
chr8 (116-241)||(34254678-34254805)
chr8 (8-76)||(20686517-20686586)
chr8 (114-194)||(23799211-23799291)
chr8 (2-63)||(2999975-3000037)
chr8 (279-325)||(4731267-4731313)
chr8 (162-243)||(42497904-42497986)
chr8 (150-194)||(4696263-4696307)
chr8 (135-243)||(10014849-10014957)
chr8 (114-242)||(31217947-31218077)
chr8 (114-221)||(17982364-17982473)
chr8 (21-76)||(10239727-10239782)
chr8 (114-221)||(19948669-19948778)
chr8 (7-83)||(40585356-40585433)
[»] chr7 (54 HSPs)
chr7 (2-242)||(6360367-6360607)
chr7 (2-243)||(32358291-32358532)
chr7 (2-146)||(48599779-48599923)
chr7 (2-160)||(29608296-29608454)
chr7 (2-131)||(2361426-2361555)
chr7 (114-243)||(47674292-47674421)
chr7 (114-243)||(47676485-47676614)
chr7 (2-137)||(30814343-30814478)
chr7 (114-243)||(27347614-27347742)
chr7 (114-243)||(2647283-2647412)
chr7 (2-87)||(4509152-4509237)
chr7 (2-87)||(4510994-4511079)
chr7 (2-143)||(4512844-4512985)
chr7 (2-84)||(6431602-6431684)
chr7 (114-243)||(14070182-14070312)
chr7 (114-243)||(14380210-14380340)
chr7 (114-243)||(4585851-4585980)
chr7 (114-238)||(18126339-18126463)
chr7 (114-242)||(26417004-26417132)
chr7 (114-221)||(2761651-2761758)
chr7 (114-243)||(48489120-48489249)
chr7 (2-84)||(34311171-34311254)
chr7 (114-243)||(4538900-4539029)
chr7 (136-243)||(2389764-2389871)
chr7 (2-84)||(22269605-22269688)
chr7 (114-221)||(48491290-48491397)
chr7 (2-63)||(2389934-2389995)
chr7 (114-194)||(21983625-21983704)
chr7 (114-238)||(33332041-33332165)
chr7 (114-253)||(496343-496481)
chr7 (114-243)||(23554729-23554860)
chr7 (150-243)||(43863951-43864044)
chr7 (114-214)||(46515923-46516023)
chr7 (114-243)||(49092071-49092203)
chr7 (114-221)||(1113368-1113475)
chr7 (114-243)||(4796255-4796384)
chr7 (2-77)||(22328854-22328930)
chr7 (2-63)||(3258647-3258709)
chr7 (116-243)||(19495659-19495789)
chr7 (114-242)||(6570284-6570412)
chr7 (114-243)||(4178464-4178595)
chr7 (156-243)||(30026391-30026477)
chr7 (115-193)||(2479719-2479796)
chr7 (2-59)||(5116290-5116348)
chr7 (115-193)||(44847762-44847839)
chr7 (115-193)||(47264026-47264103)
chr7 (117-243)||(79773-79902)
chr7 (114-194)||(21989290-21989369)
chr7 (114-160)||(31733311-31733357)
chr7 (169-235)||(31733354-31733420)
chr7 (283-325)||(48491208-48491250)
chr7 (116-192)||(24515110-24515187)
chr7 (280-325)||(34311334-34311379)
chr7 (114-146)||(30025081-30025113)
[»] chr1 (48 HSPs)
chr1 (2-213)||(13547544-13547754)
chr1 (2-213)||(13549455-13549665)
chr1 (17-243)||(37033539-37033765)
chr1 (2-241)||(193086-193325)
chr1 (2-221)||(29135762-29135961)
chr1 (8-243)||(37879372-37879587)
chr1 (2-84)||(47255789-47255871)
chr1 (114-243)||(44454849-44454978)
chr1 (1-143)||(19752258-19752400)
chr1 (7-84)||(19754122-19754199)
chr1 (114-243)||(31658928-31659057)
chr1 (9-131)||(11348283-11348404)
chr1 (1-87)||(34602793-34602879)
chr1 (1-87)||(34603204-34603290)
chr1 (114-243)||(28220575-28220705)
chr1 (114-243)||(49918039-49918168)
chr1 (114-221)||(30476797-30476904)
chr1 (114-235)||(13598782-13598904)
chr1 (114-243)||(28223770-28223900)
chr1 (114-242)||(1833212-1833341)
chr1 (114-243)||(10924913-10925042)
chr1 (229-329)||(42298542-42298642)
chr1 (114-243)||(4552997-4553126)
chr1 (9-67)||(7482693-7482751)
chr1 (24-143)||(31928277-31928397)
chr1 (164-248)||(3156552-3156636)
chr1 (2-77)||(6808084-6808160)
chr1 (2-62)||(47114825-47114885)
chr1 (2-77)||(42298430-42298505)
chr1 (122-243)||(37070157-37070279)
chr1 (150-243)||(11348191-11348284)
chr1 (116-243)||(3206675-3206805)
chr1 (114-243)||(3282089-3282218)
chr1 (114-192)||(29652195-29652273)
chr1 (2-64)||(37167948-37168010)
chr1 (2-83)||(41135452-41135534)
chr1 (2-62)||(28242041-28242102)
chr1 (114-194)||(21536206-21536285)
chr1 (116-243)||(20762361-20762490)
chr1 (154-243)||(3189040-3189131)
chr1 (154-243)||(3197857-3197948)
chr1 (115-193)||(13604259-13604336)
chr1 (114-221)||(13316666-13316775)
chr1 (156-243)||(13659694-13659778)
chr1 (116-192)||(15820048-15820124)
chr1 (154-242)||(22819852-22819940)
chr1 (115-194)||(16455385-16455464)
chr1 (161-194)||(16124295-16124328)
[»] chr2 (40 HSPs)
chr2 (2-239)||(35447339-35447575)
chr2 (2-138)||(45726507-45726643)
chr2 (2-84)||(1632187-1632269)
chr2 (114-243)||(2837193-2837322)
chr2 (114-243)||(34389233-34389362)
chr2 (114-243)||(36318358-36318488)
chr2 (7-76)||(7450940-7451009)
chr2 (114-243)||(20522604-20522733)
chr2 (114-238)||(14698600-14698724)
chr2 (2-84)||(17450222-17450304)
chr2 (2-127)||(42262064-42262190)
chr2 (114-243)||(21630327-21630456)
chr2 (209-323)||(1632300-1632413)
chr2 (115-243)||(33528209-33528338)
chr2 (114-238)||(10706843-10706967)
chr2 (150-238)||(17865595-17865684)
chr2 (2-66)||(42288564-42288628)
chr2 (114-243)||(36988423-36988554)
chr2 (114-243)||(45099444-45099575)
chr2 (114-243)||(39483258-39483388)
chr2 (114-238)||(23078062-23078186)
chr2 (114-243)||(33118517-33118646)
chr2 (116-221)||(5723604-5723711)
chr2 (114-243)||(8389733-8389864)
chr2 (1-66)||(33647817-33647883)
chr2 (169-243)||(39284587-39284661)
chr2 (116-221)||(2334767-2334874)
chr2 (169-243)||(29867569-29867644)
chr2 (10-128)||(30218496-30218615)
chr2 (114-192)||(36206013-36206092)
chr2 (115-193)||(28258814-28258891)
chr2 (114-221)||(4503480-4503589)
chr2 (39-128)||(24397651-24397740)
chr2 (231-291)||(17629022-17629082)
chr2 (177-243)||(6595406-6595473)
chr2 (114-192)||(13569712-13569789)
chr2 (114-143)||(7450877-7450906)
chr2 (35-68)||(44750240-44750273)
chr2 (280-325)||(45726415-45726460)
chr2 (114-146)||(39284672-39284704)
[»] chr5 (40 HSPs)
chr5 (2-221)||(27015026-27015245)
chr5 (2-185)||(38746535-38746718)
chr5 (2-243)||(5057521-5057761)
chr5 (114-243)||(42426584-42426713)
chr5 (2-131)||(40146843-40146974)
chr5 (2-84)||(213099-213181)
chr5 (114-243)||(13487895-13488022)
chr5 (114-243)||(32636513-32636643)
chr5 (114-221)||(19806118-19806225)
chr5 (2-84)||(16642331-16642414)
chr5 (114-241)||(16650971-16651098)
chr5 (2-64)||(27638069-27638131)
chr5 (114-243)||(11916557-11916687)
chr5 (136-221)||(535615-535700)
chr5 (2-67)||(28277963-28278028)
chr5 (150-221)||(39468917-39468988)
chr5 (114-243)||(13239442-13239572)
chr5 (114-235)||(14520612-14520733)
chr5 (13-77)||(30802579-30802644)
chr5 (115-243)||(31004739-31004868)
chr5 (162-243)||(40146739-40146820)
chr5 (114-194)||(12083813-12083892)
chr5 (2-83)||(30792872-30792954)
chr5 (169-243)||(42428822-42428896)
chr5 (174-243)||(38746460-38746529)
chr5 (114-186)||(16649972-16650044)
chr5 (169-243)||(30683312-30683386)
chr5 (154-243)||(37438835-37438925)
chr5 (2-65)||(4160284-4160348)
chr5 (22-77)||(14689883-14689938)
chr5 (116-221)||(25412473-25412580)
chr5 (114-160)||(533542-533588)
chr5 (114-221)||(13342772-13342881)
chr5 (114-192)||(30182329-30182409)
chr5 (2-66)||(33906586-33906650)
chr5 (2-78)||(35615808-35615885)
chr5 (115-193)||(9352971-9353048)
chr5 (1-77)||(10055160-10055237)
chr5 (156-193)||(36931986-36932023)
chr5 (25-61)||(316419-316455)
[»] scaffold0066 (1 HSPs)
scaffold0066 (114-241)||(20764-20891)
[»] scaffold0006 (4 HSPs)
scaffold0006 (114-235)||(6067-6189)
scaffold0006 (115-243)||(2876-3005)
scaffold0006 (115-193)||(132916-132993)
scaffold0006 (156-243)||(149455-149539)
[»] scaffold0002 (2 HSPs)
scaffold0002 (2-127)||(490899-491025)
scaffold0002 (114-243)||(434221-434353)
[»] scaffold0176 (2 HSPs)
scaffold0176 (136-243)||(17635-17742)
scaffold0176 (7-77)||(18461-18530)
[»] scaffold0087 (2 HSPs)
scaffold0087 (115-248)||(36413-36546)
scaffold0087 (115-193)||(43598-43675)
[»] scaffold0197 (1 HSPs)
scaffold0197 (1-83)||(1859-1942)
[»] scaffold0016 (1 HSPs)
scaffold0016 (154-241)||(114278-114365)
[»] scaffold0098 (1 HSPs)
scaffold0098 (115-193)||(45582-45659)
[»] scaffold0140 (1 HSPs)
scaffold0140 (156-193)||(8054-8091)


Alignment Details
Target: chr6 (Bit Score: 296; Significance: 1e-166; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 43 - 374
Target Start/End: Complemental strand, 26661621 - 26661290
Alignment:
Q  43 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  26661621 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcataatcatgtcacgttttcccaaatcgt 26661522  T
Q  143 gacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 242  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26661521 gacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcac 26661422  T
Q  243 gttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttcttaaatcaccaaattttg 342  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26661421 gttttgcctccaggaccaaccatgcattcaacatcagatatcgtgacacggatgtcaaatcgtgtcatgattcttcgctttcttaaatcaccaaattttg 26661322  T
Q  343 agtcatccataacaatgtacatccacaggttc 374  Q
    ||||||||||||||||||||||||| ||||||    
T  26661321 agtcatccataacaatgtacatccaaaggttc 26661290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 43 - 374
Target Start/End: Complemental strand, 26767592 - 26767261
Alignment:
Q  43 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  26767592 gtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcataatcatgtcacgttttcccaaatcgt 26767493  T
Q  143 gacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 242  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26767492 gacaatgttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcac 26767393  T
Q  243 gttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttcttaaatcaccaaattttg 342  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26767392 gttttgcctccaggaccaaccatgcattcaacatcagatatcgtgacacggatgtcaaatcgtgtcatgattcttcgctttcttaaatcaccaaattttg 26767293  T
Q  343 agtcatccataacaatgtacatccacaggttc 374  Q
    ||||||||||||||||||||||||| ||||||    
T  26767292 agtcatccataacaatgtacatccaaaggttc 26767261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 21593373 - 21593138
Alignment:
Q  8 tttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcaga 107  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||| || || ||| ||   |||||||| |    
T  21593373 tttagtatctaaaaccctaaaagttctaacctttggtttccatgagattcaccaagcttacccaacaaatgggttatggagtgcttacatagtgttcata 21593274  T
Q  108 tccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagcc 207  Q
    ||||| |||||||||||||| ||||||||||||||||||  |||||| || || ||||||||||| |||||||||||||| |||||  | ||||||||||    
T  21593273 tccggacaaaatcgtgtcacattttcccaaatcgtgacacggttggtacgaacgacccaaggtacgaccaaccttatcctaaaaacatgcccagcaagcc 21593174  T
Q  208 gaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||| |||||| |||||||||||| ||||||||    
T  21593173 gaaaatcgtgtcacgttttcccaaaattgtgtcacg 21593138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 3809164 - 3809402
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| ||||||| |||   |||    
T  3809164 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttgctcaacaaatgggtcaaagaatgcttataatgtg 3809263  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| ||||||||| ||||| ||||||||||| |||||   ||||| ||||| ||||||||||| ||||||||||||||||||||   |||      
T  3809264 ttcagatccggacaaaatcgtatcacgatttcccaaatcatgacacatttggtacgtacgacccaaggtacgaccaaccttatcctgaaaac-tttcc-- 3809360  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||||| |||||| ||| |||||||||||||||||    
T  3809361 caagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacg 3809402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 17762700 - 17762571
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || ||| || ||| ||   ||||    
T  17762700 tcaacctttagtatctaaaaccctaaaagttctctccttttgtttccatgagattcaccaagcttacccaacaaatgggccatggagtgcttacatagtg 17762601  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttt 131  Q
    ||||||||||| |||||||||| |||||||    
T  17762600 ttcagatccggacaaaatcgtgacacgttt 17762571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 26830584 - 26830721
Alignment:
Q  7 ctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcag 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| || ||| |||  | |||| ||    
T  26830584 ctttattatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatggatcatggagtgcttatatattgtttag 26830683  T
Q  107 atccgggcaaaatcgtgtcacgttt-tcccaaatcgtg 143  Q
    |||||| |||| ||||||||||||| ||| ||||||||    
T  26830684 atccggacaaattcgtgtcacgtttctccaaaatcgtg 26830721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 22964080 - 22964209
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||||||||| ||||||   |||| |||||| |  |||||||| ||||||||||||||||||||  |||||||||||| |||||    
T  22964080 caaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaat 22964179  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| ||||||||||||||| |||||    
T  22964180 cgtgtcacgttttcccaaaatcgtatcacg 22964209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 23824313 - 23824184
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||||||||| ||||||   |||| |||||| |  |||||||| ||||||||||||||||||||  |||||||||||| |||||    
T  23824313 caaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaat 23824214  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| ||||||||||||||| |||||    
T  23824213 cgtgtcacgttttcccaaaatcgtatcacg 23824184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 24435687 - 24435566
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||| |||||||||| ||  |||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||| | | | ||||  ||||||    
T  24435687 caaattcgtgtcacgattggccaaatcgtgacacggttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgccaaacaagttgaaaat 24435588  T
Q  214 cttgtcacattttcccaaaatc 235  Q
    | |||||| |||||||||||||    
T  24435587 cgtgtcacgttttcccaaaatc 24435566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 5043341 - 5043278
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagct 65  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5043341 tcaatctttagtatctaaaaccctaaaagttccctcctttgatttccatgagattcaccaagct 5043278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 22425282 - 22425356
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  22425282 tcaacctttagtatctaaaaccctaaa-gttccctcctttggtttccatgagattcaccaagcttatccaacaaat 22425356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 31979899 - 31980028
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| || ||| |||| ||||||||||||||||||||| | ||||||||  ||||||    
T  31979899 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 31979998  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
      |||||| |||| ||||||||||| ||||    
T  31979999 tgtgtcacgtttttccaaaatcgtgacacg 31980028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 25072899 - 25072759
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagt 100  Q
    |||| |||||||||||||| ||||||||||||| || ||||| ||||||||||||||| ||||||||| ||||||||  |||| || |||| ||| ||||    
T  25072899 tcaacctttagtatctaaataccctaaaagttcacttctttgatttccatgagattcatcaagcttactcaacaaatgagtcaaaggatgcttatacagt 25072800  T
Q  101 gttcagatccgggcaaaatcgtgtcacg-ttttcccaaatc 140  Q
    ||||| |||| ||||| ||| ||||||| |||||| |||||    
T  25072799 gttcaaatccaggcaatatcatgtcacgattttcctaaatc 25072759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 18234465 - 18234587
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  18234465 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 18234564  T
Q  213 tcttgtcacattttcccaaaatc 235  Q
    || | |||| |||||||||||||    
T  18234565 tcgtatcacgttttcccaaaatc 18234587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 603622 - 603715
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||| | ||||| ||| | ||||||||||||||||||  | ||||||||||||||||| |||||| |||||||||||||||||||||    
T  603622 ttggtgcgtacgatccaagatacgatcaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtcacgttttcccaaaatcgtgtcacg 603715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 9183399 - 9183488
Alignment:
Q  154 tgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||| ||||||||||| ||||||||||||||||||||  | |||||||| | |||||| |||||| |||||||||||||||||||||    
T  9183399 tgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagtcaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 9183488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 26954656 - 26954792
Alignment:
Q  118 atcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttg 217  Q
    ||||||||| |||| || |||||||||||  |||| ||||||| ||||||||||| ||||||||||||||||||| | ||| |||| ||| |||||| ||    
T  26954656 atcgtgtcatgtttcccaaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgtcaagcatgccaaaaatcgtg 26954755  T
Q  218 tcacattttcccaaaatcgtgtcacgttttgcctccag 255  Q
     ||| ||||  | ||||||||||| |||||||||||||    
T  26954756 acacgttttatc-aaatcgtgtcatgttttgcctccag 26954792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2973393 - 2973456
Alignment:
Q  1 ttcaatctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaag 63  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2973393 ttcaacctttagtatctacaaaccctaaaagttccctcctttggtttccatgagattcaccaag 2973456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 10076906 - 10076783
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||| |||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||    |||||||   |||||    
T  10076906 caaagtcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtaatcagcaagttaaaaat 10076807  T
Q  214 cttgtcacattttcccaaaatcgt 237  Q
    | | |||| |||||||||||||||    
T  10076806 cgtatcacgttttcccaaaatcgt 10076783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 31086189 - 31086110
Alignment:
Q  114 caaaatcgtgtcacgttttc-ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    |||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||    
T  31086189 caaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 31086110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 5017211 - 5017133
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    |||||||||||||| ||||  ||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||    
T  5017211 caaaatcgtgtcacattttttcaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 5017133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 5571943 - 5571850
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||| ||||||||||| |||||||||| ||| |||||| | ||||||||  ||||||| |||||| ||||| |||||||||| ||||    
T  5571943 ttggtgcgtacgacccaaggtacgaccaaccttaacctaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatcgtgacacg 5571850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 17759494 - 17759427
Alignment:
Q  176 caaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||||||||||  ||||||||||||||||||  |||||| ||| |||||||||||||||||    
T  17759494 caaccttatcctgaaaacttgtccagcaagccgaaaattgtgtcacgtttccccaaaatcgtgtcacg 17759427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 33211534 - 33211658
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||| |||||  ||||||||||||  |||||||||||| |||||| |||| |  |||| |||||| |||||| | ||| |||||| |||||    
T  33211534 caaaatcgtgtcatgttttgtcaaatcgtgacatggttggtgcgtacgacccaaagtacgataaaccatatcctaaaaacgtgcccaacaagcc-aaaat 33211632  T
Q  214 cttgtcacattttcccaaaatcgtgt 239  Q
    | || ||| |||| ||||||||||||    
T  33211633 catgacacgtttttccaaaatcgtgt 33211658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 16452679 - 16452756
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||||||||    
T  16452679 aaatcgtgtcacgtttttccccaatcgtgccatgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16452756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 16452790 - 16452867
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||||||||    
T  16452790 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16452867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 21272704 - 21272575
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||| |||||||| ||  ||||||| |||||  |||||||||||| | ||||||||  ||||||||||||||||||||| | | | || | | |||||    
T  21272704 caaaattgtgtcacgattggccaaatcttgacacggttggtgcgtacgatccaaggtatgaccaaccttatcctgaaaacgtgccaaacatgtcaaaaat 21272605  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | || |||  || |||||||||||||||||    
T  21272604 cgtgacacgattacccaaaatcgtgtcacg 21272575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 5406548 - 5406655
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||| |||| |  | |||||||||| |||||    
T  5406548 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaat 5406647  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  5406648 cgtgtcac 5406655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 5410873 - 5410980
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||||| |||| |  | |||||||||| |||||    
T  5410873 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaat 5410972  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  5410973 cgtgtcac 5410980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 30834884 - 30834994
Alignment:
Q  114 caaaatcgtgtcacgtttt--cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaa 210  Q
    |||||||||||||||||||  ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| ||    
T  30834884 caaaatcgtgtcacgttttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaa 30834983  T
Q  211 aatcttgtcac 221  Q
    |||| ||||||    
T  30834984 aatcgtgtcac 30834994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 5411583 - 5411712
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    |||||||||||| |||| ||| ||||||| ||   ||| ||||||| ||||||||||| |||||||||||| |||||| |  | |||||||||| ||||     
T  5411583 aaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaa 5411682  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
      ||||||  ||| ||||||||||||||||    
T  5411683 tgtgtcacgattttccaaaatcgtgtcacg 5411712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 5413812 - 5413905
Alignment:
Q  129 ttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcac 221  Q
    ||||||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||| ||||||    
T  5413812 ttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcac 5413905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 31405024 - 31405100
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaa 191  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||| ||||||| ||||||||||||||||||    
T  31405024 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacctaaggtacgaccaaccttatcctgaaa 31405100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 603553 - 603623
Alignment:
Q  61 aagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttt 131  Q
    |||||||| |||||||| ||||| ||||||| |||   |||||||||||||| ||||| |||| |||||||    
T  603553 aagcttactcaacaaatgggtcaaagaatgcttatattgtgttcagatccggacaaaagcgtgacacgttt 603623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 5407297 - 5407387
Alignment:
Q  154 tgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||| ||||||||||| |||||||||||| |||||| |  | |||||||||| ||||   ||||||  ||| ||||||||||||||||    
T  5407297 tgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacg 5407387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 24714754 - 24714872
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||| |||||||| ||  ||| |||||||||  |||||  ||||  |||||  |||| ||||| ||||||||||||||| | ||||||||  ||||||    
T  24714754 caaaattgtgtcacgattggccatatcgtgacacggttggatcgtatgacccacagtacgaccaatcttatcctgaaaacgtgcccagcaagttgaaaat 24714853  T
Q  214 cttgtcacattttcccaaa 232  Q
    | |||||| |||| |||||    
T  24714854 cgtgtcacgtttttccaaa 24714872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 33160702 - 33160811
Alignment:
Q  114 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    |||||| ||||||||||||||   ||||||| ||   ||| ||||||| |||||| |||| ||||||||||||||||||| |  | |||||||||| |||    
T  33160702 caaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 33160801  T
Q  212 atcttgtcac 221  Q
    ||| ||||||    
T  33160802 atcgtgtcac 33160811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 21593102 - 21593058
Alignment:
Q  280 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttc 324  Q
    |||||||||||||| || |||||| |||||||||||||| |||||    
T  21593102 aaatcgtgacacggttgccaaatcatgtcacgattcttcactttc 21593058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 11271 - 11030
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||   |||    
T  11271 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagatttaccaagcttacccaacaaatgggtcaaagaatgcatatattgtg 11172  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||   ||||||||||| |||||| |||| ||||||||||||||||||||  | ||||    
T  11171 ttcagaaccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccag 11072  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| ||||||||| |||||||||| |||||||||||||||||    
T  11071 caaaccgaaaatcgtgtcacatttccccaaaatcgtgtcacg 11030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 6655669 - 6655428
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||   |||    
T  6655669 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagatttaccaagcttacccaacaaatgggtcaaagaatgcatatattgtg 6655570  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||   ||||||||||| |||||| |||| ||||||||||||||||||||  | ||||    
T  6655569 ttcagaaccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccag 6655470  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| ||||||||| |||||||||| |||||||||||||||||    
T  6655469 caaaccgaaaatcgtgtcacatttccccaaaatcgtgtcacg 6655428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 8 - 237
Target Start/End: Original strand, 50674307 - 50674536
Alignment:
Q  8 tttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcaga 107  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||   |||||||||    
T  50674307 tttagtatttaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattgtgttcaga 50674406  T
Q  108 tccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagcc 207  Q
    ||||| |||||| |||||| | |||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||     
T  50674407 tccggacaaaattgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgtgcccagcaagct 50674506  T
Q  208 gaaaatcttgtcacattttcccaaaatcgt 237  Q
    ||||||| |||||| |||||||||||||||    
T  50674507 gaaaatcatgtcacgttttcccaaaatcgt 50674536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 26363978 - 26363737
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| || ||| ||   ||||    
T  26363978 tcaacctttagtatctaaaaccctaaaagttccctcccttggtttccatgagattcaccaagcttacccaacaaatgggtcatggagtgcttacatagtg 26363879  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||   ||||||||||| ||||||||||  ||||||||||||||||||||  |  |||    
T  26363878 ttcagatccggacaaaatcgtgtcacgatttcccaaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaacttgctcag 26363779  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  26363778 caagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 26363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 27417406 - 27417647
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||| |||  ||||    
T  27417406 tcaacctttagtatctaaaaccctaaaagttccctcctttggttttcatgagattcaccaagcttacccaacaaatgggtcatggagtgcttatatagtg 27417505  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    || |||||||| ||||||||||||||| |||||||||||||||||  |||| ||||||| ||||||||||| |||||||||||||||||| || | | |     
T  27417506 tttagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaccgtgccgaa 27417605  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||  ||||||| |||||| |||||||||||||||||||||    
T  27417606 caagttgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 27417647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 40630697 - 40630456
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    ||    
T  40630697 tcaacctttagtatctaaaaccctaaaagtttcatcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattatg 40630598  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||   ||||||| ||  ||||||||||| ||||||||||| ||||||| | | | ||    
T  40630597 ttcagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcatatgacccaaggtacgaccaaccttattctgaaaatgtgcctag 40630498  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||| ||||||| |||||| |||||||||||||||| ||||    
T  40630497 caagctgaaaatcgtgtcacgttttcccaaaatcgtgacacg 40630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 54882733 - 54882512
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||| |||||||||||| ||||    
T  54882733 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcactaagcttacccaacaaatgagtcaaagaatgcatatgtagtg 54882634  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    |||||||||||||||||| |||||||                     |||||||||||| ||||||||||| | ||||||||||||||||||| |||||     
T  54882633 ttcagatccgggcaaaattgtgtcac--------------------agttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaacgtgtccaa 54882554  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  54882553 caagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 54882512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 34570763 - 34570892
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  34570763 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgtccagcaagccgaaaat 34570862  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||||||||    
T  34570863 cgtgtcacgttttcccaaaatcgtgtcacg 34570892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 50263153 - 50263383
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||   |||||||| ||||| ||| ||| |||   |||    
T  50263153 tcaacctttagtgtctaaaaccctaaaagttccctcctttggttttcatgagattcaccaaactttttcaacaaatgggtcaaagagtgcttataatgtg 50263252  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||| | ||||||||||||||| ||||||||| |||||||   ||||||||||| | ||||||||| ||||||||||| ||||||||    |||     
T  50263253 ttcagatccagacaaaatcgtgtcacgatttcccaaaccgtgacacatttggtgcgtacga-ccaaggtacgaccaaccttattctgaaaacttacccac 50263351  T
Q  202 caagccgaaaatcttgtcacattttcccaaaa 233  Q
    ||||||||||||| ||| || |||||||||||    
T  50263352 caagccgaaaatcgtgttacgttttcccaaaa 50263383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 2209421 - 2209192
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| ||||||| |||   |||    
T  2209421 tcaatctttagtatctaaaaccctaaaagttccctcatttgctttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcttatattgtg 2209322  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||| | | ||||||  ||||||| ||||||||||||||||    |||||||            |||| ||||||||||||||||||||  | | ||    
T  2209321 ttcagattcagacaaaattttgtcacgatttcccaaatcgtgacgcgtttggtgc------------gtacgaccaaccttatcctgaaaacttgcctag 2209234  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| ||||||||| |||||| ||| |||||||||||||||||    
T  2209233 caaaccgaaaatcgtgtcacgtttccccaaaatcgtgtcacg 2209192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 121 - 243
Target Start/End: Original strand, 9927817 - 9927939
Alignment:
Q  121 gtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtca 220  Q
    ||||||||||||||||||||||||||   ||||||||||| |||||||| || ||||||||||||||||||||  ||||||||||||||||||| |||||    
T  9927817 gtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtca 9927916  T
Q  221 cattttcccaaaatcgtgtcacg 243  Q
    |||||||||||||||||||||||    
T  9927917 cattttcccaaaatcgtgtcacg 9927939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 41639215 - 41639037
Alignment:
Q  65 ttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacc 164  Q
    ||||||||||||| ||||||  | ||| ||   ||||||||||||| | ||||||||||||| | |||||||||||||||||  |||| ||||||| |||    
T  41639215 ttacccaacaaatgggtcatgaagtgcttacatagtgttcagatccagacaaaatcgtgtcatggtttcccaaatcgtgacacagttgatgcgtacgacc 41639116  T
Q  165 caaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||||||| ||||||||||||||||||||| | ||| ||||  ||||||| |||||| |||| ||||||||||||||||    
T  41639115 caaggtacgaccaaccttatcctgaaaacgtgcccaacaagttgaaaatcgtgtcacgtttttccaaaatcgtgtcacg 41639037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 37740445 - 37740320
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||||||||||||||||   |||||| |||| ||||||||||| ||||||||||||||||||||  | || |||||||||||||    
T  37740445 caaaatcgtgtcacgttttcccaaatcgtgacacatttggtgtgtacgacccaaggtacgaccaaccttatcctgaaaacttgccctgcaagccgaaaat 37740346  T
Q  214 cttgtcacattttcccaaaatcgtgt 239  Q
    | |||||| |||||||||||||||||    
T  37740345 catgtcacgttttcccaaaatcgtgt 37740320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 55085821 - 55085946
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| ||||||| | |  || |    
T  55085821 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttcattgagattcaccaagcttacccaacaaatgggtcaaagaatgc-tttatagag 55085919  T
Q  102 ttcagatccgggcaaaatcgtgtcacg 128  Q
    ||||||| |||||||||||||| ||||    
T  55085920 ttcagattcgggcaaaatcgtgacacg 55085946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 36314945 - 36314816
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  36314945 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 36314846  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||| ||||    
T  36314845 cgtgtcacgttttcccaaaatcgtgacacg 36314816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 36329154 - 36329025
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  36329154 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 36329055  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||| ||||    
T  36329054 cgtgtcacgttttcccaaaatcgtgacacg 36329025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 46570007 - 46570130
Alignment:
Q  8 tttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcaga 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||| |  ||| ||   ||||||||||    
T  46570007 tttagtatctaaaaccctaaaatttccctcctttggtttccatgagattcaccaagcttgcccaacaaatgggtcatggtgtgcttacatagtgttcaga 46570106  T
Q  108 tccgggcaaaatcgtgtcacgttt 131  Q
    ||| | |||||||||| |||||||    
T  46570107 tccagacaaaatcgtgacacgttt 46570130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 5429499 - 5429370
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||| ||||||||| |||||||||   ||||||||||| ||||||||||| ||||| |||| |||||||||  ||||| ||||| ||||||    
T  5429499 caaaatcgtgtcatgttttcccacatcgtgacacgattggtgcgtacgacccaaggtacgaccaatcttaacctgaaaacttgtccaacaagctgaaaat 5429400  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | | |||| |||||||||||||||||||||    
T  5429399 cgtatcacgttttcccaaaatcgtgtcacg 5429370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 54200255 - 54200362
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||| ||||||||||||||||| |  ||||||||||| ||||||||||| |||||||||||| |||||||  | ||||||||||||||||    
T  54200255 caaaatcgtgtcacattttcccaaatcgtgactagtttggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacttgcccagcaagccgaaaat 54200354  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  54200355 cgtgtcac 54200362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 8653313 - 8653239
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaa 76  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  8653313 tcaacctttagtatctaaaaccctaaaagttctctcctttggtttccatgagattcaccaagcttacctaacaaa 8653239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 8665120 - 8665046
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaa 76  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  8665120 tcaacctttagtatctaaaaccctaaaagttctctcctttggtttccatgagattcaccaagcttacctaacaaa 8665046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 8689211 - 8689082
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    ||||||||||||||||||||| |||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  8689211 caaaatcgtgtcacgttttcc-aaatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 8689113  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||||||||    
T  8689112 tcgtgtcacgttttcccaaaatcgtgtcacg 8689082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 10071598 - 10071524
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaa 76  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  10071598 tcaacctttagtatctaaaaccttaaaagttccctcctttgatttccatgagattcaccaagattacccaacaaa 10071524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 25861748 - 25861618
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  |||||||||||||   ||| ||||||| ||||||||||| ||||||||||||||||||||  | ||||||||  ||||||    
T  25861748 caaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagcaagttgaaaat 25861649  T
Q  214 cttgtcac-attttcccaaaatcgtgtcacg 243  Q
    | ||||||  |||||||||||||||| ||||    
T  25861648 cgtgtcacgtttttcccaaaatcgtgacacg 25861618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 5268914 - 5268785
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 213  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||| ||||   ||||||    
T  5268914 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaat 5268815  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||| ||||    
T  5268814 cgtgtcacgttttcccaaaatcgtgacacg 5268785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 54867561 - 54867690
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| | ||||||||| |||||||||||||  |||||| | ||||||||  ||||||    
T  54867561 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggtacgaccaaccttatccgaaaaacgtgcccagcaagttgaaaat 54867660  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||| ||| ||||    
T  54867661 cgtgtcacgttttcccaaaattgtgacacg 54867690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 12073106 - 12073042
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagctt 66  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12073106 tcaacctttagtatctaaaaccctaaaagttccatcctttggtttccatgagattcaccaagctt 12073042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 46703214 - 46703152
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagc 64  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46703214 tcaacctttagtatctaaaaccctaaaagttctctcctttggtttccatgagattcaccaagc 46703152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 5143644 - 5143772
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 213  Q
    |||||||||||||||||||| |||||||||||   |||||||| |||||||||||| | |||||||||||||||||||||   ||| ||||   ||||||    
T  5143644 aaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgcacaacccaaggtgcgaccaaccttatcctgaaaacgtacccaacaagtttgaaaat 5143742  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||||||||| |||||||||| ||||    
T  5143743 cgtgtcacattttcacaaaatcgtgccacg 5143772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 6743130 - 6743001
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||| |||||| |||||||||||||||||||   || ||||||||  |||||||||| ||||||||||||||||||||| | ||| ||||   |||||    
T  6743130 caaaattgtgtcaagttttcccaaatcgtgacacgattagtgcgtacgtcccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagtttaaaat 6743031  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| ||||||||||| |||| ||||    
T  6743030 cgtgtcacgttttcccaaaaacgtgccacg 6743001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 12745787 - 12745895
Alignment:
Q  136 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaat 234  Q
    |||||||||||   |||| |||||| ||||||||||| ||||||||||||||| |||||  | ||||||||||||||||| |||||| ||||||||||||    
T  12745787 aaatcgtgacacgattggcgcgtacgacccaaggtacgaccaaccttatcctggaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaat 12745886  T
Q  235 cgtgtcacg 243  Q
    | |||||||    
T  12745887 catgtcacg 12745895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 22883207 - 22883283
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||| |||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||    
T  22883207 tcaacctttagtatctaaataccctaaaatttccctcatttggtttccatgagattcaccaagcttactcaacaaat 22883283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 22934871 - 22934947
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||| |||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||    
T  22934871 tcaacctttagtatctaaataccctaaaatttccctcatttggtttccatgagattcaccaagcttactcaacaaat 22934947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 16623008 - 16622931
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||    
T  16623008 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16622931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 35661985 - 35661911
Alignment:
Q  169 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| ||||||||||||||||||||| | ||| ||||||||||||| || |||||||||||||||||||||||||    
T  35661985 gtacgaccaaccttatcctgaaaacgtgcccaacaagccgaaaatcgtgacacattttcccaaaatcgtgtcacg 35661911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 8653200 - 8653111
Alignment:
Q  229 caaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttc 318  Q
    ||||||||||||||||||| ||| |||  |||| ||||||||| ||||||||||| ||||||||| || |||||| ||||||||||||||    
T  8653200 caaaatcgtgtcacgttttaccttcagatccaaacatgcattcgacatcagaaattgtgacacggttgccaaatcatgtcacgattcttc 8653111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 8665007 - 8664918
Alignment:
Q  229 caaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttc 318  Q
    ||||||||||||||||||| ||| |||  |||| ||||||||| ||||||||||| ||||||||| || |||||| ||||||||||||||    
T  8665007 caaaatcgtgtcacgttttaccttcagatccaaacatgcattcgacatcagaaattgtgacacggttgccaaatcatgtcacgattcttc 8664918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 10071477 - 10071403
Alignment:
Q  216 tgtcacattttcccaaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacac 291  Q
    ||||||||||||| |||||||||| |||||||| |||||| ||||| |||||||||| ||||||||||||||||||    
T  10071477 tgtcacattttcc-aaaatcgtgttacgttttgtctccagaaccaaacatgcattcagcatcagaaatcgtgacac 10071403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 33989576 - 33989501
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaa 76  Q
    |||| |||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||| |||||||||    
T  33989576 tcaaactttagtatctaaataccctaaaagttatctgctttggtttccatgagattcaccaagcttgcccaacaaa 33989501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 5148064 - 5148189
Alignment:
Q  118 atcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatctt 216  Q
    ||||||||||||||| | |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||  ||||| |||   ||||||| |    
T  5148064 atcgtgtcacgttttgc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtatccagtaagtttgaaaatcgt 5148162  T
Q  217 gtcacattttcccaaaatcgtgtcacg 243  Q
    ||||  ||||| |||||||||| ||||    
T  5148163 gtcaagttttcacaaaatcgtgccacg 5148189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 16628587 - 16628510
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||| ||||||    
T  16628587 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcatgaaaa 16628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 41964130 - 41964044
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcataga 87  Q
    |||| |||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||| | || ||||| |||||||||    
T  41964130 tcaacctttagtatctacataccctaaaagttccctcctttgatttccatgagattcaccaaactttctcaccaaatgggtcataga 41964044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 52095757 - 52095839
Alignment:
Q  162 acccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||| |||||| |||||||||||||||||||||    
T  52095757 acccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 52095839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 46570133 - 46570222
Alignment:
Q  154 tgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||| |||||| |||| |||||||||||||||||||   | ||||||||||||||||  |||||| ||||||||||||| |||||||    
T  46570133 tgcgtacgacccaaagtacgaccaaccttatcctgaaaatttgcccagcaagccgaaaattgtgtcacgttttcccaaaatcttgtcacg 46570222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 29254313 - 29254206
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| | ||||  ||| ||||||||||| ||||| ||  | ||| ||||||||||||    
T  29254313 caaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgatccaaaatacgaccaaccttattctgaatacttgcccaacaagccgaaaat 29254214  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  29254213 catgtcac 29254206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 35370792 - 35370859
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttac 68  Q
    |||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||||||    
T  35370792 tcaacctttagtatctaaataccttaaaagttccctcctttgatttccatgagattcatcaagcttac 35370859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 36994365 - 36994250
Alignment:
Q  128 gttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttc 227  Q
    ||||| |||||||||||||  |||||||||||| ||| ||||||| | ||||||||||  ||||||| | | ||||||||||||||  || ||| |||||    
T  36994365 gttttgccaaatcgtgacacggttggtgcgtacgacctaaggtacgatcaaccttatctagaaaacgtgcctagcaagccgaaaattgtgacacgttttc 36994266  T
Q  228 ccaaaatcgtgtcacg 243  Q
    | ||||| ||||||||    
T  36994265 caaaaattgtgtcacg 36994250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 26176028 - 26176102
Alignment:
Q  169 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| ||||||||||||||||||||  | ||| ||||||||||||| |||||| |||||||||||| ||||||||    
T  26176028 gtacgaccaaccttatcctgaaaacttgcccatcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacg 26176102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26699901 - 26699978
Alignment:
Q  1 ttcaatctttagtatctaaaa-ccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    ||||| ||||||||||||||  ||||| |||||||||| ||||||||||||||||||||| |||||| | ||||||||    
T  26699901 ttcaacctttagtatctaaatgccctacaagttccctcatttggtttccatgagattcacaaagcttgctcaacaaat 26699978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 35662155 - 35662094
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaag 63  Q
    |||| ||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||    
T  35662155 tcaacctttagtatctaaaatcctaaaagttctctcatttggtgtccatgagattcaccaag 35662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 379092 - 379028
Alignment:
Q  2 tcaatctttagtatcta-aaaccctaaaagttccctcctttggtttccatgagattcaccaagct 65  Q
    |||| |||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  379092 tcaacctttagtatctacaaatcctaaaagttctctcctttggtttccacgagattcaccaagct 379028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 56179028 - 56179103
Alignment:
Q  169 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| ||||||||||||||||||| |  | |||||||||| |||||| |||||| |||||||||||||||||||||    
T  56179028 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcatgtcacgttttcccaaaatcgtgtcacg 56179103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 248
Target Start/End: Complemental strand, 3909915 - 3909782
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||| ||||||||||||  |||||||||||  |||| ||||||| || |||||||| ||||||||||| || |||||| | | | || ||| |||||    
T  3909915 caaaatcatgtcacgttttctaaaatcgtgacacggttgatgcgtacgactcaaggtacgaccaaccttat-cttaaaacgtgccaaacatgccaaaaat 3909817  T
Q  214 cttgtcacattttcccaaaatcgtgtcacgttttg 248  Q
      |||||  |||||| |||||||||||||| ||||    
T  3909816 agtgtcatgttttccaaaaatcgtgtcacgatttg 3909782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 38811533 - 38811590
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattca 58  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  38811533 tcaacctttagtatctaagtaccctaaaagttccctcctttagtttccatgagattca 38811590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 3785782 - 3785722
Alignment:
Q  23 cctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 83  Q
    |||||||||||| ||||||| |||||||||||| |||||| ||||| |||||||| |||||    
T  3785782 cctaaaagttccatcctttgatttccatgagatccaccaaacttactcaacaaatgggtca 3785722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 35369894 - 35369971
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 83  Q
    |||| ||||||||||||||    |||||||||||||||||  ||||||||||||||| ||||||||| ||||| || |||||    
T  35369894 tcaacctttagtatctaaa----taaaagttccctcctttaatttccatgagattcatcaagcttactcaacagatgggtca 35369971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 3777966 - 3778060
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagc-aagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||   | ||| ||   ||||||| |||||| |||||||||||||||| ||||    
T  3777966 ttggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacgtaccgagcaaatttgaaaatcgtgtcacgttttcccaaaatcgtgacacg 3778060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 25723690 - 25723752
Alignment:
Q  21 accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 83  Q
    ||||||| ||||| ||| |||||||||||||| |||||||||||||||  ||||||| |||||    
T  25723690 accctaagagttcactcatttggtttccatgaaattcaccaagcttacttaacaaataggtca 25723752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 52083007 - 52083084
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||||||||||||| ||||||||||| ||   ||| ||| ||| ||||||||||  |||||||||||||||||||    
T  52083007 aaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaa 52083084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 52094014 - 52094091
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||||||||||||| ||||||||||| ||   ||| ||| ||| ||||||||||  |||||||||||||||||||    
T  52094014 aaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaa 52094091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 5370479 - 5370554
Alignment:
Q  169 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| ||||||||||||||||||  |  | |||||||||| |||||| ||||||  ||||||||||||||||||||    
T  5370479 gtacgaccaaccttatcctgaaagtcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 5370554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 5396370 - 5396327
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||    
T  5396370 ttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaac 5396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 24968888 - 24968801
Alignment:
Q  155 gcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 242  Q
    |||||| |||||| |||| ||||||||||||||||||||| ||| |||| ||  || ||| ||||||  || | ||||||||||||||    
T  24968888 gcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgtcaagcatgctaaatatcgtgtcacgattgcacaaaatcgtgtcac 24968801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 47514976 - 47515023
Alignment:
Q  21 accctaaaagttccctcctttggtttccatgagattcaccaagcttac 68  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  47514976 accctaaaagttcactcatttggtttccatgagattccacaagcttac 47515023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 26363701 - 26363656
Alignment:
Q  280 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 325  Q
    ||||||||||| || || ||||||||||||||||||||| ||||||    
T  26363701 aaatcgtgacatggttgccaaatcgtgtcacgattcttcactttct 26363656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 12739942 - 12740014
Alignment:
Q  169 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtc 240  Q
    |||| ||||||||||||||||||| |  | |||||||||| |||||  ||| || ||||||||||||||||||    
T  12739942 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtc 12740014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 12748148 - 12748220
Alignment:
Q  169 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtc 240  Q
    |||| ||||||||||||||||||| |  | |||||||||| |||||  ||| || ||||||||||||||||||    
T  12748148 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtc 12748220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 8e-77; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 4569664 - 4569423
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||    ||    
T  4569664 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttactcaacaaatgggtcaaagaatgcttatattttg 4569565  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    |||| ||||| ||||||||||||||||||||||  || |||||||  |||||||||||| ||||||||||| ||||||||||||||||||||  | ||||    
T  4569564 ttcaaatccgagcaaaatcgtgtcacgttttccacaaccgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccag 4569465  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||||| |||||| ||||||||||||| |||||||    
T  4569464 caagccgaaaatcgtgtcacgttttcccaaaatcatgtcacg 4569423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 43404194 - 43404429
Alignment:
Q  8 tttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcaga 107  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||   |||||||||    
T  43404194 tttagtatctaaaaccctaaaagttccctcatttggtttccatgagattcaccaagctcacccaacaaatgggtcaaagaatacatatattgtgttcaga 43404293  T
Q  108 tccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagcc 207  Q
    |||||  |||||||||||||| |||||||||||||||||   ||||||||||| ||||||||||| ||| ||||||||||||||||  |  |||||||||    
T  43404294 tccggagaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcctgaaaacttgctcagcaagcc 43404393  T
Q  208 gaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||| |||||| ||| |||||||||||||||||    
T  43404394 gaaaatcgtgtcacgtttccccaaaatcgtgtcacg 43404429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 55302426 - 55302660
Alignment:
Q  8 tttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcaga 107  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||| |||||| || ||| ||   ||||||||||    
T  55302426 tttagtatctaaaaccctaaaagtttcctcctttggtttcaatgaaattcaccaagcttacccaacaaatgggtcatggagtgcttacatagtgttcaga 55302525  T
Q  108 tccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagcc 207  Q
    ||||| |||||| |||||||| |||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||    
T  55302526 tccggacaaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagcc 55302625  T
Q  208 gaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||| | |||| ||||||| |||||||||||||    
T  55302626 gaaaatcgtatcacgttttccc-aaatcgtgtcacg 55302660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 6096054 - 6096295
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattgg-tcatagaatgcatatgcagt 100  Q
    |||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||| ||| ||| ||||||||||| | ||    
T  6096054 tcaacctttagtatctaaaaccctaaaagttctctcctctgatttccatgagattcaccaagctttcccaacaaaatgggtcaaagaatgcatatactgt 6096153  T
Q  101 gttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtcca 200  Q
    ||||| |||| | ||||||||||||| | |||||||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||   |||||    
T  6096154 gttcatatcctgacaaaatcgtgtcatgatttcccaaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtcca 6096253  T
Q  201 gcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 242  Q
      |||||||||||| |||||| ||||||||||||||||||||    
T  6096254 ataagccgaaaatcgtgtcacgttttcccaaaatcgtgtcac 6096295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 43402245 - 43402486
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||| |||||||||||    ||    
T  43402245 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccataagattcaccaagctcacccaacaaatgagtcaaagaatgcatatattatg 43402344  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    |||||||| |  ||||||| ||||||  |||||||||||||||||   ||||||||||| ||||||| ||||||||||||||||||||||||  | ||||    
T  43402345 ttcagatcagaacaaaatcatgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcctgaaaacttgcccag 43402444  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||||| |||||| |||  ||||||||||||||||    
T  43402445 caagccgaaaatcgtgtcacgtttctccaaaatcgtgtcacg 43402486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 36018564 - 36018334
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagt 100  Q
    |||| |||||||||||| | ||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||    
T  36018564 tcaacctttagtatctacataccctgaaagttctctcctttggtttccatgagattcaccaagcttatccaacaaatgggtcaaagaatgcatatgtagt 36018465  T
Q  101 gttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtcca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||            |||| |||||||||||||| |||||| | |||    
T  36018464 gttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacatggttggtgc------------gtacgaccaaccttatcctaaaaacgtgccca 36018377  T
Q  201 gcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  36018376 gcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacg 36018334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 5 - 243
Target Start/End: Original strand, 31340499 - 31340739
Alignment:
Q  5 atctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttc 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||   ||||||    
T  31340499 atctttagtatctaaaaccctaaaagttctctcctttggtttccataagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattgtgttc 31340598  T
Q  105 agatccgggcaaaatcgtgtcacgttttccc-aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagca 203  Q
    ||||| || ||||||| ||||||| |||||| |||||||| ||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||| ||    
T  31340599 agatctggacaaaatcatgtcacgatttcccaaaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccaaca 31340698  T
Q  204 agccgaaaatcttgtca-cattttcccaaaatcgtgtcacg 243  Q
    ||||||||||| |||||   ||||||||||||| |||||||    
T  31340699 agccgaaaatcgtgtcatgtttttcccaaaatcatgtcacg 31340739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 7 - 243
Target Start/End: Complemental strand, 40913046 - 40912809
Alignment:
Q  7 ctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagctt-acccaacaaattggtcatagaatgcatatgcagtgttca 105  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| ||   ||||||||    
T  40913046 ctttagtatctaaaaccctaaaagtcccctcctttggtttccatgagattcaccaagctttacccaacaaatgggtcaaagaatgcttacatagtgttca 40912947  T
Q  106 gatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag 205  Q
    ||||||| ||||||||||||| | |||||||||||||||||   ||||||||||| | ||||| ||| |||| |||||||| ||||||  | ||| ||||    
T  40912946 gatccggacaaaatcgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgatccaagatacgaccagccttatccagaaaacttgcccaacaag 40912847  T
Q  206 ccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||| |||||| |||||||||||| || |||||    
T  40912846 ccgaaaatcgtgtcacgttttcccaaaattgtatcacg 40912809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 54593418 - 54593176
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagt 100  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| |||||| || ||| ||   |||    
T  54593418 tcaacctttagtatctacataccctaaaagttccctcctttggtttccatgagattcaccaagcttttcgaacaaatgggtcatggagtgcttacatagt 54593319  T
Q  101 gttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtcca 200  Q
    |||||||| ||||||||||||||||| | |||||||||||||||||   ||||||||||| |||||| |||| ||||||||||||||||||||| | |||    
T  54593318 gttcagattcgggcaaaatcgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgccca 54593219  T
Q  201 gcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||||  ||||||| |||||| |||||||||||| | ||||||    
T  54593218 gcaagttgaaaatcgtgtcacgttttcccaaaattgagtcacg 54593176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 49199926 - 49200147
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||   |||    
T  49199926 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattgtg 49200025  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| |||||||||| ||| |                    ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||    
T  49200026 ttcagatccggacaaaatcgtgacacat--------------------ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccag 49200105  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||||| |||||| ||| ||||| |||||||||||    
T  49200106 caagccgaaaatcgtgtcacgtttccccaacatcgtgtcacg 49200147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 29812882 - 29812753
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | |||||||| | |||||    
T  29812882 caaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagacaaaaat 29812783  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||||||||    
T  29812782 cgtgtcacgttttcccaaaatcgtgtcacg 29812753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 5236806 - 5236935
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| ||||||||||| ||||| ||||||||||||||    ||||||||||||||||    
T  5236806 caaaatcgtgtcacgttttgccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcctgaaaactttcccagcaagccgaaaat 5236905  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||| ||||||||    
T  5236906 cgtgtcacgttttcccaaaattgtgtcacg 5236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 34490926 - 34490704
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattgg-tcatagaatgcatatgcagt 100  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||| ||| ||| | || || ||| |||  |||    
T  34490926 tcaacctttagtatctaaaaccctaaaagttctctcctttggtttccatgagattcaccaagctttcacaataaaatgggtgatggagtgcttatatagt 34490827  T
Q  101 gttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtcca 200  Q
    |||||||||| | |||||||||| |||||||                    ||||||||| ||||||||||||||||||||||||||||||||  | |||    
T  34490826 gttcagatccagacaaaatcgtgacacgttt--------------------ggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgccca 34490747  T
Q  201 gcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
      |||||||||||| |||||| |||| ||||||||||||||||    
T  34490746 ataagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacg 34490704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 28074330 - 28074248
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 84  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28074330 tcaacctttagtatctaaaaccctaaaagtttcctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcat 28074248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 40592486 - 40592357
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  |||||||||||||   |||||| |||| | ||||||||| ||||||||||||||||||||| ||||||||||  ||||||    
T  40592486 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgtgtccagcaagttgaaaat 40592387  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||| ||||    
T  40592386 cgtgtcacgttttcccaaaatcgtgacacg 40592357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 29810687 - 29810558
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||   |||||||||||| |||||    
T  29810687 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccagcaagccaaaaat 29810588  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
      ||  || |||| | ||||||||||||||    
T  29810587 tgtgctacgtttttctaaaatcgtgtcacg 29810558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 30235724 - 30235616
Alignment:
Q  209 aaaatcttgtcacattttcccaaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtc 308  Q
    |||||| |||||| |||||| |||||||||||||||||||||| ||| ||||| |||||||||  |||||||||||||||||||| || |||||||||||    
T  30235724 aaaatcgtgtcacgttttcc-aaaatcgtgtcacgttttgccttcagaaccaaacatgcattcggcatcagaaatcgtgacacggttgccaaatcgtgtc 30235626  T
Q  309 acgattcttc 318  Q
    ||||||||||    
T  30235625 acgattcttc 30235616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 8127012 - 8127141
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  |||||||||||||  ||||||| |||| ||||||| ||| |||||||||||||||||||||   | ||||||  ||||||    
T  8127012 caaaatcgtgtcacgtttgtccaaatcgtgacacggttggtgtgtacgacccaagatacgaccaaccttatcctgaaaacgtacctagcaagttgaaaat 8127111  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | ||||||| ||||||||||||||| ||||    
T  8127112 cgtgtcacactttcccaaaatcgtgacacg 8127141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 44331352 - 44331259
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||   |||||||||| |||||| |||||| |||||||||||||||||||||    
T  44331352 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagccaaaaatcgtgtcactttttcccaaaatcgtgtcacg 44331259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 1736008 - 1735884
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||||||||||||||| |||||||||||||| |||| | |||   ||||  ||||||    
T  1736008 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaatgtgtcattcaagttgaaaat 1735909  T
Q  214 cttgtcacattttcccaaaatcgtg 238  Q
    | |||||| ||||||||||||||||    
T  1735908 cgtgtcacgttttcccaaaatcgtg 1735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 24694870 - 24694779
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag 205  Q
    ||||||||||| ||||||  |||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  24694870 caaaatcgtgttacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgtccagcaag 24694779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 30235838 - 30235696
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaac-aaattggtcatagaatgcatatgcagt 100  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||| |||| |||||| || ||| ||    ||    
T  30235838 tcaacctttagtatctaaaaccctaaaagttctctcctttggtttcattgagattcaccaagcttacccaacaaaatgggtcatggagtgcttaaaatgt 30235739  T
Q  101 g-ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtg 143  Q
    | ||||||| | | ||||||||||||||||||||| ||||||||    
T  30235738 gtttcagat-ctgtcaaaatcgtgtcacgttttccaaaatcgtg 30235696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 8370193 - 8370064
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaa-gccgaaaa 212  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||| |||||||||||||| ||||||   |||||||    |||||    
T  8370193 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaacgttcccagcaattttgaaaa 8370095  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||| ||||    
T  8370094 tcgtgtcacgttttcccaaaatcgtgacacg 8370064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 46173318 - 46173206
Alignment:
Q  130 tttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttccc 229  Q
    |||||||| ||||||||  |||||||||||| ||||||||||| ||||||||||||||||||||| | ||| |||||||  |||| |||||  |||||||    
T  46173318 tttcccaattcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagccg-gaatcgtgtcatgttttccc 46173220  T
Q  230 aaaatcgtgtcacg 243  Q
    ||||||||||||||    
T  46173219 aaaatcgtgtcacg 46173206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 40845037 - 40845157
Alignment:
Q  116 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcct-gaaaacgggtccagcaagccgaaaatc 214  Q
    |||| |||||||||||  |||||||||||||   ||||||||||||||||||||||| ||||||||||||||  |||||| |||||||| |  |||||||    
T  40845037 aaattgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaaacgtgtccagcacgttgaaaatc 40845136  T
Q  215 ttgtcacattttcccaaaatc 235  Q
     |||||| |||||||||||||    
T  40845137 gtgtcacgttttcccaaaatc 40845157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 47303959 - 47303891
Alignment:
Q  8 tttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaa 76  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  47303959 tttagtatctaaaaccataaaagttctctcctttgatttccatgagattcaccaagcttacccaacaaa 47303891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 48438598 - 48438727
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 213  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| | |||||||||||||||||||||||||||||||   ||| ||||   ||||||    
T  48438598 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggtacaaccaaccttatcctgaaaacgtacccatcaagtttgaaaat 48438697  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| ||| |||||||||||| ||||    
T  48438698 cgtgtcacgtttccccaaaatcgtgacacg 48438727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 34795583 - 34795456
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagt 100  Q
    |||| |||||||||||||| |||||||||| || |||||||||||| |||  |||||||||| ||||||||||||||  |||||||| ||| |||  | |    
T  34795583 tcaacctttagtatctaaataccctaaaagatctctcctttggttttcataggattcaccaaacttacccaacaaataagtcatagagtgcttatatact 34795484  T
Q  101 gttcagatccgggcaaaatcgtgtcacg 128  Q
    ||||| || | |||||||||||||||||    
T  34795483 gttcaaattcaggcaaaatcgtgtcacg 34795456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 16264731 - 16264860
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    ||||||||||||||| ||||| |||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||| ||   |||||    
T  16264731 caaaatcgtgtcacgctttcc-aaatcgtggcacgattggtgcgtaccacccaaggtacgaccaaccttatcctgaaaacgtacccagctagtttgaaaa 16264829  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||| ||||    
T  16264830 tcgtgtcacgttttcccaaaatcgtgacacg 16264860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 36029475 - 36029605
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    |||||| |||||||||||| | ||| |||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  36029475 caaaattgtgtcacgtttttctaaaccgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 36029574  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||| ||||||||||| ||||    
T  36029575 tcgtgtcacgtttttccaaaatcgtgacacg 36029605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 39032259 - 39032130
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    ||||||||||||||| ||| | |||||||| ||   ||||||||||| ||||||||||| |||||| ||||||||||||||   ||||||||   |||||    
T  39032259 caaaatcgtgtcacgattttc-aaatcgtggcacgattggtgcgtacgacccaaggtacgaccaactttatcctgaaaacgtacccagcaagtttgaaaa 39032161  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || ||||||||||||||||||||||| ||||    
T  39032160 tcgtgtcacattttcccaaaatcgtgacacg 39032130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 47923608 - 47923530
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||||||||||||||  |||||||||||||   ||| ||||||||||||||||||| |||||||||||||||||||    
T  47923608 caaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacaacccaaggtacgaccaaccttatcctgaaaa 47923530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 7762082 - 7761954
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||    
T  7762082 aaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaat 7761983  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | ||||||  ||||||||||||||||||||    
T  7761982 cgtgtcac-gtttcccaaaatcgtgtcacg 7761954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 44331796 - 44331925
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||| || ||||||| ||||||||||||||   |||||| |||| ||||||||||| || ||| ||||| ||||||||   |||| ||||| |||||    
T  44331796 caaaatcatgccacgtttccccaaatcgtgacacatttggtgtgtacgacccaaggtacgactaactttatcttgaaaacgtacccaggaagccaaaaat 44331895  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||| ||||||||||||||||    
T  44331896 cgtgtcacgtttttccaaaatcgtgtcacg 44331925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 41819976 - 41820040
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagctt 66  Q
    |||| ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  41819976 tcaacctttagtatctaaaaacctaaaagttatctcctttggtttccatgagattcaccaagctt 41820040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 5434355 - 5434409
Alignment:
Q  23 cctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  5434355 cctaaaagttccctcctttgatttccatgagattcaccaagcttactcaacaaat 5434409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 30709501 - 30709423
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| ||||||||||  ||||| |||||||||||||    
T  30709501 caaaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgacccaaggtaagaccaatcttatcctgaaaa 30709423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 7764270 - 7764141
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||| |||| || ||   ||| ||||||| ||||||||||| |||||||||||||| |||| |  | ||| |||||| |||||    
T  7764270 aaatcgtgtcacgtttttccccaatcatgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaat 7764171  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||||||||    
T  7764170 cgtgtcacgttttcccaaaatcgtgtcacg 7764141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 35139174 - 35139250
Alignment:
Q  8 tttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 83  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||| |||||||||||||||  ||||||| |||||    
T  35139174 tttagtatctaaatacccaaaaagtaccctcctttggtttccatgaaattcaccaagcttacttaacaaatgggtca 35139250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 5258492 - 5258623
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    ||||||||||||||||||| ||| ||||||| ||   | | ||||||| |  |||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  5258492 caaaatcgtgtcacgtttttccccaatcgtgccacaatcgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 5258591  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| ||||||  ||||||||||||||||||||    
T  5258592 atcgtgtcacgatttcccaaaatcgtgtcacg 5258623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 9636476 - 9636607
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  ||||| |||||| |||    
T  9636476 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgtccatcaagccaaaa 9636575  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| |||||   |||||||||||| |||||||    
T  9636576 atcgtgtcatgatttcccaaaatcatgtcacg 9636607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 26323967 - 26324042
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaa 76  Q
    |||| |||||||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| |||||||    
T  26323967 tcaacctttagtatctaaatatcttaaaagtttcctcctttggtttccatgagattcaccaaacttactcaacaaa 26324042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 27027088 - 27027218
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaag-ccgaaa 211  Q
    ||||||||||||||||||||| ||| |||| ||   ||||||||||| ||||||||||| ||||||||||||||| |||| |   ||||||||   ||||    
T  27027088 caaaatcgtgtcacgttttccaaaa-cgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagcaagtttgaaa 27027186  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| |||||| |||||||||||||||| ||||    
T  27027187 atcgtgtcacgttttcccaaaatcgtgacacg 27027218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 40735248 - 40735117
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaag-ccgaaa 211  Q
    ||||||||||||||||||  ||||||| | |||   ||||||||||| ||||||||||| ||||||||||||||| |||| |   ||||||||   ||||    
T  40735248 caaaatcgtgtcacgtttgtccaaatcataacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaaatgtagccagcaagtttgaaa 40735149  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| |||||| |||||||||||||||| ||||    
T  40735148 atcgtgtcacgttttcccaaaatcgtgacacg 40735117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 47303850 - 47303763
Alignment:
Q  231 aaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttc 318  Q
    ||||| ||||||||||||||| ||| ||| | |||||||||  ||||| |||||||| ||||| || |||||||||||||||||||||    
T  47303850 aaatcatgtcacgttttgccttcagaaccgaacatgcattcggcatcaaaaatcgtgtcacggttgccaaatcgtgtcacgattcttc 47303763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 23410681 - 23410759
Alignment:
Q  116 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    |||| |||||||||||| |||||||||||||  ||||||| | |||||||||||||| ||||| |||||| ||||||||    
T  23410681 aaattgtgtcacgttttgccaaatcgtgacacggttggtgtgaacaacccaaggtacgaccaaacttatcttgaaaacg 23410759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 27038459 - 27038548
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtcacattttcccaaaatcgtg 238  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    ||| ||||   ||||||| |||||||||||||||||||||||    
T  27038459 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatacccaacaagtttgaaaatcgtgtcacattttcccaaaatcgtg 27038548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 46860184 - 46860120
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagct 65  Q
    |||| |||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||    
T  46860184 tcaacctttagtatctacataccctaaaagttctctcatttggtttccatgagattcaccaagct 46860120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 39127268 - 39127197
Alignment:
Q  7 ctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    ||||||||| |||| ||||||||||||| |||| ||| |||||||||||||||| |||||||| ||||||||    
T  39127268 ctttagtatgtaaataccctaaaagttctctccgttgatttccatgagattcactaagcttactcaacaaat 39127197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 21711603 - 21711713
Alignment:
Q  134 ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtcacattttcccaaa 232  Q
    |||||||||||||   ||||||||||| ||||||||||| ||||||||||||| |||||||    |||||||   ||||||  |||||| ||||||||||    
T  21711603 ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatccggaaaacgtactcagcaagtttgaaaattgtgtcacgttttcccaaa 21711702  T
Q  233 atcgtgtcacg 243  Q
    |||||| ||||    
T  21711703 atcgtgacacg 21711713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 40734317 - 40734239
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    |||||| |||||||||||  |||||||||||||   ||| ||||||| | ||||||||| |||||||||||||||||||    
T  40734317 caaaattgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 40734239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 45094982 - 45094853
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||| ||||||| ||   ||| |||||||   ||||||||| ||||||||||||||||||| |  | ||| |||||| |||||    
T  45094982 aaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgttccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 45094883  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | ||||||  ||||||||||| ||||||||    
T  45094882 cgtgtcacgatttcccaaaattgtgtcacg 45094853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 16498840 - 16498756
Alignment:
Q  156 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||| ||||| ||||| |||||||||||   |  |||| ||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  16498840 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacg 16498756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 25929100 - 25929023
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaa 191  Q
    ||||||||||||||| ||  ||||||||| |||  |||||| ||||| | |||| |||| ||||||||||||||||||    
T  25929100 caaaatcgtgtcacgattggccaaatcgtaacacggttggtacgtacgatccaatgtacgaccaaccttatcctgaaa 25929023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 31340775 - 31340820
Alignment:
Q  280 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 325  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||    
T  31340775 aaatcgtgacacggttgccaaatcgtgtcacgattcttcactttct 31340820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 34490669 - 34490623
Alignment:
Q  279 gaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 325  Q
    ||||||||||||||| || |||||||||||| |||||||| ||||||    
T  34490669 gaaatcgtgacacggttgccaaatcgtgtcatgattcttcactttct 34490623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 37726058 - 37726135
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| |||||| |||| ||||||||||||||||||||    
T  37726058 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatacgtacgacccaatgtacgaccaaccttatcctgaaaac 37726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 44331223 - 44331177
Alignment:
Q  279 gaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 325  Q
    ||||||||||||||| || |||| |||||||||||||||| ||||||    
T  44331223 gaaatcgtgacacggttgccaaagcgtgtcacgattcttcactttct 44331177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 51398633 - 51398587
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 160  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||    
T  51398633 caaaatcgtgtcacattttcccaaatcgtgacacgtttggtgcgtac 51398587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 3393341 - 3393296
Alignment:
Q  198 ccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||||||||| |||||| ||||||  ||||||||||||||||||||    
T  3393341 ccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 3393296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 37408236 - 37408199
Alignment:
Q  156 cgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  37408236 cgtacgacccaaggtacgaccaaccttatcctgaaaac 37408199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 51398590 - 51398517
Alignment:
Q  169 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 242  Q
    |||| ||||||| |||||| |||||  | ||| ||| ||||||||  |||||| ||||||||||||||||||||    
T  51398590 gtacgaccaaccatatcctaaaaacttgcccaacaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcac 51398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 27974615 - 27974579
Alignment:
Q  156 cgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  27974615 cgtacgacccaaggtacaaccaaccttatcatgaaaa 27974579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 35925908 - 35925952
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    |||||||||||| | ||| |||| |||||||||||||||||||||    
T  35925908 ttggtgcgtacatctcaatgtacgaccaaccttatcctgaaaacg 35925952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 194
Target Start/End: Complemental strand, 7041 - 6848
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||    
T  7041 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcatataaagtg 6942  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcc-caaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    |||| ||||| |||||||||| ||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||    
T  6941 ttcatatccgagcaaaatcgtatcacgttttccacaaatcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacg 6848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 80746 - 80979
Alignment:
Q  10 tagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||| | ||||||| |||   |||||||||||    
T  80746 tagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagattttccaacaaatgggtgaaagaatgcttatattgtgttcagatc 80845  T
Q  110 cgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccga 209  Q
    ||| ||||||||||||||| |||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||    
T  80846 cggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccga 80945  T
Q  210 aaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||| || ||| |||||||||||||||||||||    
T  80946 aaatcgtgccacgttttcccaaaatcgtgtcacg 80979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 2e-74; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 42435446 - 42435687
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||   |||    
T  42435446 tcaacctttagtatctaaaaccctaaaagtttcctcctttggtttccatgagattcaccaagcttaccgaacaaatgggtcaaagaatgcatatattgtg 42435545  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    |||||| |||| ||||||| ||||||| |||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | | ||    
T  42435546 ttcagaaccggacaaaatcatgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgccaag 42435645  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| |||||||| |||||| ||| |||||||||||||||||    
T  42435646 caagacgaaaatcgtgtcacgtttccccaaaatcgtgtcacg 42435687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 4283259 - 4283040
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| | |   |||    
T  4283259 tcaacctttagtatctaaaaccctaaaagttctctcctttggtttccatgagattcaccaagcttacacaacaaatgggtcaaagaatgcttgtattgtg 4283160  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||  |||||| |||||||| ||||||||||| | |||   ||||||| ||| ||||||||||| ||||||||||||||||||||  | ||||    
T  4283159 ttcagatccgaacaaaatggtgtcacgatttcccaaatcctaacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgcccag 4283060  T
Q  202 caagccgaaaatcttgtcac 221  Q
    ||||||||||||| ||||||    
T  4283059 caagccgaaaatcgtgtcac 4283040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 22976247 - 22976006
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||| | ||||||||| ||||||||||||||||| ||| || || ||| ||   ||||    
T  22976247 tcaacctttagtatctaaaactctaaaagttcactcctttggtttcgaagagattcactaagcttacccaacaaatgggttatggagtgcttacatagtg 22976148  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||| | |||| |||||| ||| |||||| ||||||||||   ||||||||| | |||||| |||| || |||||||||||||||||  ||| ||    
T  22976147 ttcagatccagacaaagtcgtgttacgatttcccgaatcgtgacacgtttggtgcgtgcgacccaatgtacgacaaaccttatcctgaaaacttgtcaag 22976048  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||| ||||||| |||||| |||||||||||||||||||||    
T  22976047 caagctgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 22976006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 30143161 - 30143032
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||| |||||| |||| |||||||||||||| |||||  ||||||||||||||||||    
T  30143161 caaaatcgtgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaaagtacgaccaaccttatccttaaaacttgtccagcaagccgaaaat 30143062  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | ||||||||||||||||||||||||||||    
T  30143061 cgtgtcacattttcccaaaatcgtgtcacg 30143032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 4731477 - 4731348
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||| |||||||||||||  |||||||| |||  |||||||||| ||||| ||||| ||||||||| ||||||||||||||||||    
T  4731477 caaaatcgtgtcacgttttgccaaatcgtgacacagttggtgcctacggcccaaggtacgaccaatcttattctgaaaacgtgtccagcaagccgaaaat 4731378  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||  |||||||||||||||||||||    
T  4731377 catgtcatgttttcccaaaatcgtgtcacg 4731348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 243
Target Start/End: Complemental strand, 40221453 - 40221236
Alignment:
Q  7 ctttagtatctaaaaccctaaaagttccc-tcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttca 105  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||   |||||||    
T  40221453 ctttagtatcaaaaaccctaaaagttcccctcctatggtttccatgagattcaccaagcttactcaacaaatgggtcaaagaatgcttatattgtgttca 40221354  T
Q  106 gatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag 205  Q
    ||||||  |||||||||| |||||                    ||||||||||| |||||||| || || |||||||||||||||||| ||||| ||||    
T  40221353 gatccgaacaaaatcgtgacacgt--------------------ttggtgcgtacgacccaaggcacgacaaaccttatcctgaaaacgtgtccaacaag 40221274  T
Q  206 ccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    | ||||||| |||||| |||||||||||||||| ||||    
T  40221273 ctgaaaatcgtgtcacgttttcccaaaatcgtgacacg 40221236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 117 - 243
Target Start/End: Complemental strand, 15212602 - 15212476
Alignment:
Q  117 aatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatctt 216  Q
    ||||||||||| |||||| |||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  |  |||||||||||||||| |    
T  15212602 aatcgtgtcacattttcctaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgt 15212503  T
Q  217 gtcacattttcccaaaatcgtgtcacg 243  Q
    ||||| |||||||||||||||||||||    
T  15212502 gtcacgttttcccaaaatcgtgtcacg 15212476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 11383699 - 11383479
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| || ||| || ||| ||   |||     
T  11383699 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttgcctaacaaatgggacatggagtgcttacatagta 11383600  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| |||||||||| ||||                    |||| ||||||| |||||| |||| |||||||||||| ||||||   | ||||    
T  11383599 ttcagatccggacaaaatcgtgacacg--------------------gttgatgcgtacgacccaaagtacgaccaaccttatcttgaaaatttgcccag 11383520  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcac 242  Q
    ||||| ||||||| |||||| ||||||||||||||||||||    
T  11383519 caagctgaaaatcgtgtcacgttttcccaaaatcgtgtcac 11383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 44353508 - 44353433
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44353508 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 44353433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 43036242 - 43036113
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| | ||||||||| | ||||||||||||||||||  | ||| |||| |||||||    
T  43036242 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgatccaaggtacgatcaaccttatcctgaaaacttgcccaacaagtcgaaaat 43036143  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||| ||||||||||||||||    
T  43036142 cgtgtcacgtttttccaaaatcgtgtcacg 43036113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 27811095 - 27810988
Alignment:
Q  136 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 235  Q
    |||||||||||   ||||||||||||||||||| ||| ||||||||||||||||||||  | ||||||||||||||||| |||||||||||| |||||||    
T  27811095 aaatcgtgacacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacattttctcaaaatc 27810996  T
Q  236 gtgtcacg 243  Q
    ||||||||    
T  27810995 gtgtcacg 27810988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 12702987 - 12703117
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaa 212  Q
    ||||||||||||||||||| ||||||||||||||    |||||||||| |||||| |||| |||||||||||||||||| |  |   ||||||| |||||    
T  12702987 caaaatcgtgtcacgtttttcccaaatcgtgacacgtatggtgcgtacgacccaatgtacgaccaaccttatcctgaaagcttgcttagcaagctgaaaa 12703086  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||||||||    
T  12703087 tcgtgtcacgttttcccaaaatcgtgtcacg 12703117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 4733622 - 4733515
Alignment:
Q  136 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 235  Q
    |||||||||||  |||||||||||| ||||||||||| || |||  ||||||||||||| ||  || |||||||||||| |||||| |||||||||||||    
T  4733622 aaatcgtgacacggttggtgcgtacgacccaaggtacgacaaactgtatcctgaaaacgtgtttagaaagccgaaaatcgtgtcacgttttcccaaaatc 4733523  T
Q  236 gtgtcacg 243  Q
    ||||||||    
T  4733522 gtgtcacg 4733515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 5702195 - 5702065
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    |||||||||| |||||||| |||||||||||||   ||||||||||||| ||||||||| ||||||||||||||||||| |   ||||||||   |||||    
T  5702195 caaaatcgtgacacgttttgccaaatcgtgacacgattggtgcgtacaatccaaggtacgaccaaccttatcctgaaaatgtacccagcaagtttgaaaa 5702096  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||| ||||||||||| ||||    
T  5702095 tcgtgtcacgtttttccaaaatcgtgacacg 5702065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 1345718 - 1345848
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggt--acaaccaaccttatcctgaaaacgggtccagcaagccgaaa 211  Q
    |||||||||||||||||| |  ||| |||||||  |||| ||||||| |||||||||  || ||||||||||||||||||||| ||| ||||||| ||||    
T  1345718 caaaatcgtgtcacgtttcctaaaaccgtgacatggttgatgcgtacgacccaaggtgtacgaccaaccttatcctgaaaacgtgtcaagcaagctgaaa 1345817  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||  |||||||||||| | |||||||||||||    
T  1345818 attgtgtcacattttctc-aaatcgtgtcacg 1345848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 1746566 - 1746697
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  1746566 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 1746665  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| ||||||  ||||||||||||||||||||    
T  1746666 atcgtgtcacgatttcccaaaatcgtgtcacg 1746697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 34256854 - 34256983
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||||||||| ||||||||||||| |  |  ||||||||| |||||    
T  34256854 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacaaccaatcttatcctgaaaatcttgctcagcaagccaaaaat 34256953  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | ||||||  ||||||||||||||||||||    
T  34256954 cgtgtcacgatttcccaaaatcgtgtcacg 34256983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 4743548 - 4743672
Alignment:
Q  120 cgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaaatcttgt 218  Q
    ||||| ||||||| |||||| ||||||  |||| ||||||| ||||| ||||| ||||||||||||||| |||||| | | |||||| |||||||| |||    
T  4743548 cgtgtgacgttttgccaaattgtgacacggttgatgcgtacgacccacggtacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgt 4743647  T
Q  219 cacattttcccaaaatcgtgtcacg 243  Q
    ||| ||| | |||||||||||||||    
T  4743648 cacgtttcctcaaaatcgtgtcacg 4743672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 19175445 - 19175318
Alignment:
Q  116 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatc 214  Q
    ||||||| ||||||||||| |||||||| ||   ||||||| ||| |||||||||| ||||||||||||||||||||||   ||||||||   |||||||    
T  19175445 aaatcgtatcacgttttcc-aaatcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaacgtacccagcaagtttgaaaatc 19175347  T
Q  215 ttgtcacattttcccaaaatcgtgtcacg 243  Q
     |||||| |||||||||||||||| ||||    
T  19175346 atgtcacgttttcccaaaatcgtgacacg 19175318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 190
Target Start/End: Complemental strand, 33351969 - 33351893
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaa 190  Q
    ||||||||||||||||||||||||||| |||||   ||||||||||  ||||||||||| |||||||||||||||||    
T  33351969 caaaatcgtgtcacgttttcccaaatcatgacacgtttggtgcgtatgacccaaggtacgaccaaccttatcctgaa 33351893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 241
Target Start/End: Original strand, 34254678 - 34254805
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | ||||||| || |||||    
T  34254678 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaatccaaaaat 34254777  T
Q  214 cttgtcacattttcccaaaatcgtgtca 241  Q
    | ||||||  ||||||||||||||||||    
T  34254778 cgtgtcacgatttcccaaaatcgtgtca 34254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 20686517 - 20686586
Alignment:
Q  8 tttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaa 76  Q
    ||||||||||||  ||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  20686517 tttagtatctaagtaccctgaaagttccctcctttggtttcaatgagattcaccgagcttacccaacaaa 20686586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 23799291 - 23799211
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    ||||||||||||||||||  |||||||||||||   ||||||||||| |||||| |||| ||||||||||| || ||||||    
T  23799291 caaaatcgtgtcacgtttgtccaaatcgtgacacaattggtgcgtacgacccaacgtacgaccaaccttattctaaaaacg 23799211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 2999975 - 3000037
Alignment:
Q  2 tcaatctttagtatctaaaa-ccctaaaagttccctcctttggtttccatgagattcaccaag 63  Q
    |||| ||||||||||||||  |||||||||||| ||||||||||||| |||||||||||||||    
T  2999975 tcaacctttagtatctaaattccctaaaagttctctcctttggtttctatgagattcaccaag 3000037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 4731313 - 4731267
Alignment:
Q  279 gaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 325  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4731313 gaaatcgtgacacggttgtcaaatcgtgtcacgattcttcactttct 4731267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 42497986 - 42497904
Alignment:
Q  162 acccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||| || |||||||||||||||| |  | |||||||||| | |||| ||||||| ||||||||||||||||||||    
T  42497986 acccaaggtacgactaaccttatcctgaaaatcttgcccagcaagccaataatcgtgtcacaatttcccaaaatcgtgtcacg 42497904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 4696307 - 4696263
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  4696307 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacg 4696263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 10014957 - 10014849
Alignment:
Q  135 caaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaat 234  Q
    ||||||||||||   ||| ||| ||| ||||||||||| ||||||||||||||| ||||| | | |||| ||| |||||| |||||   || ||||||||    
T  10014957 caaatcgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 10014858  T
Q  235 cgtgtcacg 243  Q
    |||||||||    
T  10014857 cgtgtcacg 10014849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 31218077 - 31217947
Alignment:
Q  114 caaaatcgtgtcacgttttc-ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    |||||||||||||||||||  || ||||||| ||   ||| ||||||  | ||||||||| |||||||||||||| |||| |  | ||| |||||| |||    
T  31218077 caaaatcgtgtcacgttttttcccaatcgtgtcacgattgatgcgtatgatccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaa 31217978  T
Q  212 atcttgtcacattttcccaaaatcgtgtcac 242  Q
    ||| ||||||  |||||||||||||||||||    
T  31217977 atcgtgtcacgatttcccaaaatcgtgtcac 31217947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 17982473 - 17982364
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| |||||||||||||| |||| |  | |||||||||| |||    
T  17982473 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaa 17982374  T
Q  212 atcttgtcac 221  Q
    ||| ||||||    
T  17982373 atcgtgtcac 17982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 10239782 - 10239727
Alignment:
Q  21 accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaa 76  Q
    |||||||||||||||||  ||| ||||||||||||||  ||||||||| |||||||    
T  10239782 accctaaaagttccctctattgatttccatgagattcgtcaagcttactcaacaaa 10239727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 19948669 - 19948778
Alignment:
Q  114 caaaatcgtgtcacg-ttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    ||||||||||||||| ||||||| ||||||| ||   ||| ||||||| | ||||||||| ||||| |||||| | |||| |  |||||||||||| |||    
T  19948669 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaacttatcataaaaatcttgtccagcaagccaaaa 19948768  T
Q  212 atcttgtcac 221  Q
    ||| ||||||    
T  19948769 atcgtgtcac 19948778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 40585433 - 40585356
Alignment:
Q  7 ctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 83  Q
    |||||||||||||| || |||||||||   ||||||||||| ||||||||| | |||||| || |||||||| |||||    
T  40585433 ctttagtatctaaatactctaaaagttatttcctttggttttcatgagattaatcaagctcacgcaacaaatgggtca 40585356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 6360367 - 6360607
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||   |||    
T  6360367 tcaacctttaatatctaaaaccctaaaagttctctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcttataatgtg 6360466  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||   ||||||||||| ||||||| ||| |||||| |||||||||||||  | |||     
T  6360467 ttcagatccggacaaaatcgtgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacgaccaacattatcctgaaaacttgcccaa 6360566  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcac 242  Q
    ||||||||||||| |||||| ||| ||||||||||||||||    
T  6360567 caagccgaaaatcgtgtcacgtttccccaaaatcgtgtcac 6360607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 32358291 - 32358532
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||| || ||| ||   ||||    
T  32358291 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagctttttcaacaaatgggtcatggagtgcttacatagtg 32358390  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| ||||||||||||||  ||| ||||||| |||||   ||||||||||| | ||||||||| | |||| |||||||||||||| | ||||    
T  32358391 ttcagatccggacaaaatcgtgtcacaattttccaaatcatgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaacgtgcccag 32358490  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||| ||||||  |||||| ||||||||||||||| |||||    
T  32358491 caagctgaaaattgtgtcacgttttcccaaaatcgtatcacg 32358532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 48599779 - 48599923
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||   |||    
T  48599779 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtaaaagaatgcatatattgtg 48599878  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgaca 146  Q
    ||||||| ||| |||||| |||||| | |||||| ||||||||||    
T  48599879 ttcagattcggacaaaattgtgtcatgatttccccaatcgtgaca 48599923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 29608454 - 29608296
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| || ||||| ||||||| |||   |||    
T  29608454 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagctttatcaacatatgggtcaaagaatgcttatattgtg 29608355  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 160  Q
    ||||||||||| ||||||||||||| | ||||| |||| ||||||   |||||||||||    
T  29608354 ttcagatccggacaaaatcgtgtcatgatttcctaaattgtgacacgtttggtgcgtac 29608296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 2361426 - 2361555
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||||| |||   |||    
T  2361426 tcaatctttagtatctaaaatcctaaaagttccctcctttggtttccatgagattcactaagcttgcccaacaaatgggtcaaagaatgcttataatgtg 2361525  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttt 131  Q
    |||||||| || |||||||||| |||||||    
T  2361526 ttcagatctggacaaaatcgtgacacgttt 2361555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 47674292 - 47674421
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||| ||||| ||||||| |||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  47674292 caaaatcatgtcatgttttccaaaatcgtgacacgtttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 47674391  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||||||||    
T  47674392 cgtgtcacgttttcccaaaatcgtgtcacg 47674421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 47676485 - 47676614
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||| |||||||||||||| |||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  47676485 caaaattgtgtcacgttttccaaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 47676584  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||||||||    
T  47676585 cgtgtcacgttttcccaaaatcgtgtcacg 47676614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 30814478 - 30814343
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||    |||    
T  30814478 tcaaccttaagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcttaaaacgtg 30814379  T
Q  102 -ttcagatccgggcaaaatcgtgtcacgttttcccaa 137  Q
     ||||||| | | ||||||||||||||||||||||||    
T  30814378 tttcagat-ctgtcaaaatcgtgtcacgttttcccaa 30814343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 27347742 - 27347614
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||| |||||||||| |||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  27347742 caaaatcgtgtcacattttcccaaaccgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 27347643  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||  |||||||||||||||||||||    
T  27347642 catgtca-gttttcccaaaatcgtgtcacg 27347614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 2647412 - 2647283
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||| ||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  2647412 caaaatcgtatcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 2647313  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||| ||||    
T  2647312 catgtcacgttttcccaaaatcgtgacacg 2647283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 4509152 - 4509237
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcataga 87  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  4509152 tcaacctttagtatctaaaaccctaaaagttccatcctttggtttccatgagattaaccaagcttacccaacaaatgggtcataga 4509237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 4510994 - 4511079
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcataga 87  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  4510994 tcaacctttagtatctaaaaccctaaaagttccatcctttggtttccatgagattaaccaagcttacccaacaaatgggtcataga 4511079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 4512844 - 4512985
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| || ||| ||    |||    
T  4512844 tcaacctttagaatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccattaaatgggtcatggagtgcttaaaacgtg 4512943  T
Q  102 -ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtg 143  Q
     ||||||| | | ||||||||||||||||||| ||||||||||    
T  4512944 tttcagat-ctgtcaaaatcgtgtcacgtttttccaaatcgtg 4512985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 6431684 - 6431602
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  6431684 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttctatgagattcaccaagcttacccaataaatgggtcat 6431602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 14070182 - 14070312
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaa 212  Q
    |||||||||||||||||||||||||||||||||   ||||||| ||| ||||||||||| |||||||||||| |||||| |  | | |||||| ||||||    
T  14070182 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaa 14070281  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||||||||    
T  14070282 tcgtgtcacgttttcccaaaatcgtgtcacg 14070312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 14380210 - 14380340
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaa 212  Q
    |||||||||||||||||||||||||||||||||   ||||||| ||| ||||||||||| |||||||||||| |||||| |  | | |||||| ||||||    
T  14380210 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaa 14380309  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||||||||    
T  14380310 tcgtgtcacgttttcccaaaatcgtgtcacg 14380340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 4585980 - 4585851
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||| ||||||||||||||||||   ||||||||||| ||||||||||| |||||||||||  |||||||    ||| |||||| |||||    
T  4585980 caaaatcgtgtcacattttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatattgaaaacttacccaacaagccaaaaat 4585881  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||||||| |||||||||||| ||||||||    
T  4585880 cttgtcacgttttcccaaaatagtgtcacg 4585851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 18126463 - 18126339
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||| ||||||||||| |||||| |||||||||||||  | ||| ||||||||||||    
T  18126463 caaaatcgtgtcacgttttctcaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaacattatcctgaaaacttgcccaacaagccgaaaat 18126364  T
Q  214 cttgtcacattttcccaaaatcgtg 238  Q
    | | |||| |||| |||||||||||    
T  18126363 cgtatcacgtttttccaaaatcgtg 18126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 26417132 - 26417004
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||| ||  |||||||||||||  |||||||||||| ||||||||||| |||||||||| |||||||||  ||||| ||| |  |||||    
T  26417132 caaaatcgtgtcacgattggccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttaccctgaaaacttgtccaacaaactaaaaat 26417033  T
Q  214 cttgtcacattttcccaaaatcgtgtcac 242  Q
    | |||||||||| ||||||||||||||||    
T  26417032 cgtgtcacatttccccaaaatcgtgtcac 26417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 2761651 - 2761758
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||| ||||| ||||||||||||||  | ||||||||| ||||||    
T  2761651 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctgaaaacttgcccagcaagctgaaaat 2761750  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  2761751 cgtgtcac 2761758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 48489249 - 48489120
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||| ||||||||||| |||||||||||||   ||||||||||||||||||||||  ||||||||||||||| || |  | |||||||||| ||||     
T  48489249 caaaatcatgtcacgttttgccaaatcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcctggaagcatgcccagcaagccaaaaac 48489150  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| ||||||| |||||||||||||    
T  48489149 cgtgtcacgttttccctaaatcgtgtcacg 48489120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 34311171 - 34311254
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 84  Q
    |||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34311171 tcaacctttagtatctacataccctaaaagttccttcctttggtttccatgagattcaccaagcttacccaaaaaattggtcat 34311254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 4538900 - 4539029
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||  |||| |||||||||||||   ||||||||||| | ||||||||| ||||||||| ||||||||||  |   ||||| ||||||||    
T  4538900 caaaatcgtgtcatattttgccaaatcgtgacacgtttggtgcgtacgatccaaggtacgaccaaccttgtcctgaaaacttgcttagcaaaccgaaaat 4538999  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||||||||    
T  4539000 cgtgtcacgttttcccaaaatcgtgtcacg 4539029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 2389871 - 2389764
Alignment:
Q  136 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 235  Q
    |||||||||||   |||||| |||| | ||||||||| |||||||||||||||||||||   ||||||||| ||||||| |||||||||||| |||||||    
T  2389871 aaatcgtgacacgtttggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgttcccagcaagctgaaaatcgtgtcacattttctcaaaatc 2389772  T
Q  236 gtgtcacg 243  Q
    ||||||||    
T  2389771 gtgtcacg 2389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 22269688 - 22269605
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 84  Q
    |||| |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  22269688 tcaaactttagtatctacataccctaaatgttccctcctttggtttccatgagattcaccaagcttgcccaacaaatgggtcat 22269605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 48491397 - 48491290
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||| ||||||||||| |||||||||||||  |||||||||||| ||||||||||| |||||||| ||| ||||| || | ||| ||||||||||||    
T  48491397 caaaatcatgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaacctaatcttgaaagcgtgcccaacaagccgaaaat 48491298  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  48491297 cgtgtcac 48491290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 2389995 - 2389934
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaag 63  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2389995 tcaacctttagtatctaaaaccctaaaagtttcctcctttggtttccatgagattcaccaag 2389934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 21983625 - 21983704
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||    
T  21983625 caaaatcgtgtcacgttttcc-aaatcgtgacacaattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacg 21983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 33332165 - 33332041
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||  ||  |||||||||||||   ||||||||||| ||||||||||| |||||||||||| |||||| | | ||||||||  ||||||    
T  33332165 caaaatcgtgtcacaattgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaatgtgcccagcaagttgaaaat 33332066  T
Q  214 cttgtcacattttcccaaaatcgtg 238  Q
    | |||||| |||| |||||||||||    
T  33332065 cgtgtcacgtttttccaaaatcgtg 33332041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 496343 - 496481
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||| |||||||| || |||||||||||  |||| ||||||| || ||||||| | |||||||||||||||||| | ||| |||| ||| ||||     
T  496343 caaaatcgtatcacgtttcccaaaatcgtgacacggttgatgcgtacgactcaaggtaaatccaaccttatcctgaaaatgtgtcaagcatgccaaaaac 496442  T
Q  214 cttgtcacattttcccaaaatcgtgtcacgttttgcctcc 253  Q
    | || ||| ||||||| ||||| |||||||||||||||||    
T  496443 cgtgacacgttttccc-aaatcatgtcacgttttgcctcc 496481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 23554860 - 23554729
Alignment:
Q  114 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    |||||||||||||||||||||   ||||||| ||   ||| ||||||| |||||| |||| ||||||||||||||||||| |  | |||||||| |||||    
T  23554860 caaaatcgtgtcacgttttccattaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaa 23554761  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| |||||| |||||||||||||||||||||    
T  23554760 atcgtgtcacgttttcccaaaatcgtgtcacg 23554729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 43864044 - 43863951
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    | | ||| ||||||||| |||||| |||||||||||||||||||||    
T  43864044 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactttcctaacaaaccgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 43863951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 46516023 - 46515923
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||| |||||||||||||   ||||||| ||| |||||||||   ||||||||||||||||||||| | ||| |||||| |||||    
T  46516023 caaaatcgtgtcacgttttgccaaatcgtgacatgcttggtgcatacgacccaaggtgtgaccaaccttatcctgaaaacgtgcccaacaagccaaaaat 46515924  T
Q  214 c 214  Q
    |    
T  46515923 c 46515923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 49092071 - 49092203
Alignment:
Q  114 caaaatcgtgtcacgttttcc-caaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagc-cgaa 210  Q
    |||||||||||||||||||   ||||||||| || | ||||||| ||| | ||||||||| ||||||||||||||||||| ||   ||||||||  ||||    
T  49092071 caaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatacgatccaaggtacgaccaaccttatcctgaaaaacgtacccagcaagttcgaa 49092170  T
Q  211 aatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| ||||||||||||||||||||||| ||||    
T  49092171 aatcgtgtcacattttcccaaaatcgtgacacg 49092203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 1113475 - 1113368
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||| ||||  |||||||   ||||||||||| ||||||||||| |||||||||||||||||||   | ||| || |||||||||    
T  1113475 caaaatcgtgtcacgttttgccaatacgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgcccatcaggccgaaaat 1113376  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  1113375 cgtgtcac 1113368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 4796384 - 4796255
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  | |||| |||| |   ||||||||||| | ||||||||| ||||||  ||||||||||||| | ||| ||||  ||||||    
T  4796384 caaaatcgtgtcacgtttgtctaaattgtgatacatttggtgcgtacgatccaaggtacgaccaactctatcctgaaaacgtgcccatcaagttgaaaat 4796285  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||| ||||||||||||||||    
T  4796284 cgtgtcacgtttttccaaaatcgtgtcacg 4796255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 22328854 - 22328930
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||| |||||||||||||| ||||||||||||  ||||||||||||||||||||||||| ||||||||  |||||||    
T  22328854 tcaacctttagtatctaaataccctaaaagttttctcctttggtttccatgagattcactaagcttacttaacaaat 22328930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 3258709 - 3258647
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaag 63  Q
    |||| |||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  3258709 tcaacctttagtatctacataccctaaaagttccctcctctggtttccatgagattcaccaag 3258647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 19495789 - 19495659
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagcc-gaaaa 212  Q
    ||||||||||||||||| |||| |||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  | ||||||||||  ||||    
T  19495789 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaa 19495690  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || || ||| |||||||||||| ||||||||    
T  19495689 tcgtggcacgttttcccaaaattgtgtcacg 19495659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 6570412 - 6570284
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||| ||||||||| ||  |||||||||||||  |||| ||||||  ||||||||||| | |||||||||||| |||||| ||| |||| ||| |||||    
T  6570412 caaaaacgtgtcacgattggccaaatcgtgacacggttgatgcgtatgacccaaggtacgatcaaccttatcctaaaaacgtgtcaagcatgccaaaaat 6570313  T
Q  214 cttgtcacattttcccaaaatcgtgtcac 242  Q
    | ||||||  || || ||||| |||||||    
T  6570312 cgtgtcacgattgcctaaaattgtgtcac 6570284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 4178595 - 4178464
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    ||||||||||||||||||| ||| |||| || ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | | | |||||| |||    
T  4178595 caaaatcgtgtcacgtttttccccaatcttgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcctaacaagccaaaa 4178496  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| ||||||  ||||||||||||||||||||    
T  4178495 atcgtgtcacgatttcccaaaatcgtgtcacg 4178464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 30026391 - 30026477
Alignment:
Q  156 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||| || |||||||| ||||||||||||||| ||||| | || |||||| ||||||| |||||| ||| ||||||||| |||||||    
T  30026391 cgtacgactcaaggtacgaccaaccttatcctg-aaacgtgcccggcaagctgaaaatcgtgtcacgtttccccaaaatcatgtcacg 30026477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 2479719 - 2479796
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||| |||||||||| ||||| || ||   ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  2479719 aaaatcgtgccacgttttcc-aaatcatgccatgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 2479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 5116348 - 5116290
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcac 59  Q
    |||| ||||||||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  5116348 tcaacctttagtatttaaataccctaaaagtcccctcctttggtatccatgagattcac 5116290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 44847839 - 44847762
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| ||||||||||| ||||||||||||||||||||    
T  44847839 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 44847762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 47264026 - 47264103
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||| |||||||||| |||||||| |||  ||| | ||||| ||||||| ||| ||||||||||||||||||||    
T  47264026 aaaatcgtgccacgttttcc-aaatcgtgtcaagattgatacgtacgacccaagatacgaccaaccttatcctgaaaac 47264103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 79773 - 79902
Alignment:
Q  117 aatcgtgtcacgttttc-ccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagcc-gaaaat 213  Q
    ||||||||||| ||||  ||||||||||||    ||||||| ||  |||||| |||| ||||||||||||||||||| ||   ||||||||   ||||||    
T  79773 aatcgtgtcacattttgtccaaatcgtgacgtgattggtgcatatgacccaatgtacgaccaaccttatcctgaaaaacgtacccagcaagtttgaaaat 79872  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||||| ||||||||||| ||||    
T  79873 cttgtcacatttttccaaaatcgtgacacg 79902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 21989290 - 21989369
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    |||||||||||||| |||||| ||||| |||||   ||| ||||||  ||||||||||| | |||||||||||||||||||    
T  21989290 caaaatcgtgtcacattttcc-aaatcatgacacgattgctgcgtatgacccaaggtacgatcaaccttatcctgaaaacg 21989369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 31733311 - 31733357
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 160  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||    
T  31733311 caaaatcgtgtcacgttttcccaaatcgttacacgtttggtgcgtac 31733357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 31733354 - 31733420
Alignment:
Q  169 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 235  Q
    |||| ||||||||||||||||||||  | ||||||||||||||||  |||||| ||| || ||||||    
T  31733354 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaattgtgtcacgtttccctaaaatc 31733420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 325
Target Start/End: Complemental strand, 48491250 - 48491208
Alignment:
Q  283 tcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 325  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  48491250 tcgtgacacggttgccaaatcgtgtcacgattcttcactttct 48491208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 24515110 - 24515187
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    |||||||||| |||||| ||| ||||||| ||   ||| ||||||| | ||||||||| |||||||||||||||||||    
T  24515110 aaatcgtgtcgcgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 24515187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 34311334 - 34311379
Alignment:
Q  280 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 325  Q
    |||||||||||||  || ||||||||||||||||||||| ||||||    
T  34311334 aaatcgtgacacgtttgccaaatcgtgtcacgattcttcactttct 34311379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 30025081 - 30025113
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgaca 146  Q
    ||||||||||||||||||| |||||||||||||    
T  30025081 caaaatcgtgtcacgttttgccaaatcgtgaca 30025113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 4e-66; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 13547544 - 13547754
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| | |||||||||| ||||    
T  13547544 tcaacctttagtatctaaaactctaaaagttctctcctttggtttccatgagattcaccaagcttaccaaacaaatgggtcaaaaaatgcatatgtagtg 13547643  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    |||||||||||| |||||||||| | |||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||  |||||||| | ||||    
T  13547644 ttcagatccgggtaaaatcgtgttatgttttcccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccag 13547742  T
Q  202 caagccgaaaat 213  Q
    ||||| ||||||    
T  13547743 caagctgaaaat 13547754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 13549455 - 13549665
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| | |||||||||| ||||    
T  13549455 tcaacctttagtatctaaaactctaaaagttctctcctttggtttccatgagattcaccaagcttaccaaacaaatgggtcaaaaaatgcatatgtagtg 13549554  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    |||||||||||| |||||||||| | |||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||  |||||||| | ||||    
T  13549555 ttcagatccgggtaaaatcgtgttatgttttcccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccag 13549653  T
Q  202 caagccgaaaat 213  Q
    ||||| ||||||    
T  13549654 caagctgaaaat 13549665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 37033539 - 37033765
Alignment:
Q  17 taaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaa 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||  ||||| ||||||| |||   |||||||||||||| |||    
T  37033539 taaaaccctaaaagttccctcctttggtttccatgagattcacccagcttactcaacaaaagggtcaaagaatgcttatattgtgttcagatccggacaa 37033638  T
Q  117 aatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatctt 216  Q
    ||| |||||||| |||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||  | || ||||| |||||||| |    
T  37033639 aattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgccctgcaaggcgaaaatcgt 37033738  T
Q  217 gtcacattttcccaaaatcgtgtcacg 243  Q
    ||||  ||| || ||||||||||||||    
T  37033739 gtcatgtttcccgaaaatcgtgtcacg 37033765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 193325 - 193086
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | |||   |||    
T  193325 tcaacctttaatatctaaaaccctaaaagttatctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcaaagaatacttatattgtg 193226  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| ||||||||||||||| |||||||||||| ||||   ||||||||||| ||||||||||| ||||| |||||||| |||||  | ||||    
T  193225 ttcagatccggacaaaatcgtgtcacgatttcccaaatcgcgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctaaaaacttgcccag 193126  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtca 241  Q
    ||||||||||||  | |||| |||| ||||||| ||||||    
T  193125 caagccgaaaatggtatcacgtttttccaaaattgtgtca 193086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 29135961 - 29135762
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||   |||    
T  29135961 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttactcaacaaatgggtcaaagaatgcttatattgtg 29135862  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| |||||||||| |||||                    ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||    
T  29135861 ttcagatccggacaaaatcgtgacacgt--------------------ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccag 29135782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 37879372 - 37879587
Alignment:
Q  8 tttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcaga 107  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||   |||||||||    
T  37879372 tttagtatctaaaaccctaacagttccttcctttgatttccatgagattcaccaagcttacccaacaaatgggtcaaagaatgcatatattgtgttcaga 37879471  T
Q  108 tccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagcc 207  Q
    ||||| |||||||||| || ||                    ||||||||| | ||||||||||| |||||||||||||| |||||  |||||| ||||     
T  37879472 tccggacaaaatcgtgacatgt--------------------ttggtgcgtgcgacccaaggtacgaccaaccttatcctaaaaacttgtccagtaagct 37879551  T
Q  208 gaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||| ||||||||||| ||||||||||||||||    
T  37879552 gaaaatcgtgtcacatttttccaaaatcgtgtcacg 37879587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 47255789 - 47255871
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47255789 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcat 47255871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 44454978 - 44454849
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||| |||||||| |||||||||||||   || |||||||| |||||||||||||||||||||||| |||||||  | ||||||||||||||||    
T  44454978 caaaatcgtgccacgttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtacaaccaaccttatcttgaaaacttgcccagcaagccgaaaat 44454879  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| ||| |||||||||||||||||    
T  44454878 cgtgtcacgtttccccaaaatcgtgtcacg 44454849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 19752400 - 19752258
Alignment:
Q  1 ttcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagt 100  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||| |||||| || ||| ||    ||    
T  19752400 ttcaacctttagtatctaaaaccctaaaaattccctcatttggttttcatgagattcaccaagcttacccaacaaatgggtcatggagtgcttaaaacgt 19752301  T
Q  101 g-ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtg 143  Q
    | ||||||||| | ||||||||||||||||||||||| ||||||    
T  19752300 gtttcagatcc-gtcaaaatcgtgtcacgttttcccatatcgtg 19752258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 19754199 - 19754122
Alignment:
Q  7 ctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 84  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19754199 ctttagtatctagaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcat 19754122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 31659057 - 31658928
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||| |||| |||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||    |||||||||  |||||    
T  31659057 caaaatcgtgtcacattttaccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaactttcccagcaagcaaaaaat 31658958  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
      |||||| |||||||||||||||||||||    
T  31658957 tgtgtcacgttttcccaaaatcgtgtcacg 31658928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 11348404 - 11348283
Alignment:
Q  9 ttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagat 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||| || | | |||  |||||| ||||    
T  11348404 ttagtatctaaaaccctaaaagttccatcctttggtttccatgagattcactaagcttacccaacaaatgggtcatggagtacttatatagtgtttagat 11348305  T
Q  109 ccgggcaaaatcgtgtcacgttt 131  Q
    || | |||||||||| |||||||    
T  11348304 cc-gacaaaatcgtgacacgttt 11348283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34602793 - 34602879
Alignment:
Q  1 ttcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcataga 87  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  34602793 ttcaacctttaatatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttttccaacaaatgggtcataga 34602879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34603290 - 34603204
Alignment:
Q  1 ttcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcataga 87  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  34603290 ttcaacctttaatatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttttccaacaaatgggtcataga 34603204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 28220575 - 28220705
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagc-aagccgaaaa 212  Q
    |||||||||||||||||||||||||||||||||   || |||||||| ||||||||||| |||||||||||| | || ||  |||  || ||||||||||    
T  28220575 caaaatcgtgtcacgttttcccaaatcgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaa 28220674  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||||||||    
T  28220675 tcgtgtcacgttttcccaaaatcgtgtcacg 28220705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 49918168 - 49918039
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||| ||||||||||||||||||   |||||| |||| ||||||||||  ||||||||||||||||||||| | ||||||||   |||||    
T  49918168 caaaatcgtgtcacattttcccaaatcgtgacacgattggtgtgtacgacccaaggtatgaccaaccttatcctgaaaacgtgcccagcaagttaaaaat 49918069  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||| | ||||||||||||||    
T  49918068 cgtgtcacgtttttcgaaaatcgtgtcacg 49918039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 30476797 - 30476904
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||||||||||||||||   |||||| |||| ||||||||| |||||||||||||| |||||||  | ||||||| ||||||||    
T  30476797 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgtgtacgacccaaggttcaaccaaccttatcttgaaaacttgcccagcaaaccgaaaat 30476896  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  30476897 cgtgtcac 30476904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 13598782 - 13598904
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    ||||||||||||||||||  |||||| ||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  13598782 caaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 13598881  T
Q  213 tcttgtcacattttcccaaaatc 235  Q
    || ||||||||||||||||||||    
T  13598882 tcgtgtcacattttcccaaaatc 13598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 28223770 - 28223900
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagc-aagccgaaaa 212  Q
    |||||||||||||||||||||||||| ||||||   || |||||||| ||||||||||| |||||||||||| | || ||  |||  || ||||||||||    
T  28223770 caaaatcgtgtcacgttttcccaaattgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaa 28223869  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||||||||    
T  28223870 tcgtgtcacgttttcccaaaatcgtgtcacg 28223900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 1833341 - 1833212
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtc-cagcaagccgaaaa 212  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||  |||||||||||| ||||||  |  | ||||||||| ||||    
T  1833341 caaaatcgtgtcacgttttcgcaaatcgtgacacgtttggtgcgtacaacccaaggtatgaccaaccttatcttgaaaaatgtactcagcaagccaaaaa 1833242  T
Q  213 tcttgtcacattttcccaaaatcgtgtcac 242  Q
    || ||| |  ||||||||||||||||||||    
T  1833241 tcgtgttatgttttcccaaaatcgtgtcac 1833212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 10925042 - 10924913
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||| |||||||||||||  |||| ||||||  ||||||||||  |||||| ||||  |||||||  | | | ||||||||||||    
T  10925042 caaaatcgtgtcacgttttgccaaatcgtgacacggttgatgcgtatgacccaaggtatgaccaactttattttgaaaacttgcctaccaagccgaaaat 10924943  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | ||||||||||| ||||||||||||||||    
T  10924942 cgtgtcacatttttccaaaatcgtgtcacg 10924913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 229 - 329
Target Start/End: Original strand, 42298542 - 42298642
Alignment:
Q  229 caaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttcttaa 328  Q
    |||||||||||||| |||||||| ||| ||||| |||||||||  |||||||||||||||||||| || |||||||||||| |||||||| ||||| |||    
T  42298542 caaaatcgtgtcacattttgccttcagaaccaaacatgcattcggcatcagaaatcgtgacacggttgccaaatcgtgtcatgattcttcactttcataa 42298641  T
Q  329 a 329  Q
    |    
T  42298642 a 42298642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 4552997 - 4553126
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||| ||||||||||||| |||||||||||||  |||| ||||||| || || | ||| || |||||||||||||||||| ||| | |||| |||||||    
T  4552997 caaaaacgtgtcacgttttgccaaatcgtgacacggttgatgcgtacgactcacgatacgactaaccttatcctgaaaacgtgtcaaacaagtcgaaaat 4553096  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | | |||| ||||| |||||||||||||||    
T  4553097 catatcacgttttctcaaaatcgtgtcacg 4553126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 7482693 - 7482751
Alignment:
Q  9 ttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagctta 67  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  7482693 ttagtatctaaaaccctaaaagtttcctcctttggtttccatgagattcaccaaactta 7482751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 31928277 - 31928397
Alignment:
Q  24 ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaa-caaattggtcatagaatgcatatgcagtg-ttcagatccgggcaaaatcg 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| || ||| || |  ||| ||||||| | | ||||||||    
T  31928277 ctaaaagttccctcctttggtttccatgaaattcaccaagcttacccaatcaaatgggtcatggagtgcttaagacgtgtttcagat-ctgtcaaaatcg 31928375  T
Q  122 tgtcacgttttcccaaatcgtg 143  Q
    | ||||||||||| ||||||||    
T  31928376 tatcacgttttccaaaatcgtg 31928397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 3156636 - 3156552
Alignment:
Q  164 ccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacgttttg 248  Q
    ||||||||| ||||||||||||||||||||| ||||||||| || |||||| ||| |  ||||||||||||||||||||| ||||    
T  3156636 ccaaggtacgaccaaccttatcctgaaaacgtgtccagcaaaccaaaaatcgtgttatgttttcccaaaatcgtgtcacgatttg 3156552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 6808160 - 6808084
Alignment:
Q  2 tcaatctttagtatctaaaacc-ctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||| |||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  6808160 tcaacctttagtatctaaaaaatctaaaagtttcctcctttggtttccatgagattcaccaagcttactcaacaaat 6808084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 47114885 - 47114825
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaa 62  Q
    |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  47114885 tcaatctttaatatctaaagccttaaaagttccctcctttggtttccatgagattcaccaa 47114825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 42298430 - 42298505
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||| |||||||||||||||||||||||||| | ||||||||||   ||| |||||||||||||||||||||||||    
T  42298430 tcaacctttagtatctaaaaccctaaaagtttcatcctttggttgttatgggattcaccaagcttacccaacaaat 42298505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 37070157 - 37070279
Alignment:
Q  122 tgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtca 220  Q
    ||||||| ||| |||||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||| ||||   ||||||| |||||    
T  37070157 tgtcacgattttccaaatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtca 37070256  T
Q  221 cattttcccaaaatcgtgtcacg 243  Q
    | |||||||||||||||| ||||    
T  37070257 cgttttcccaaaatcgtgacacg 37070279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 11348284 - 11348191
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||| | |||| |||| ||||||||||||||||||||  | ||| ||||||||||||| |||||| |||  ||||||||||||||||    
T  11348284 ttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttctccaaaatcgtgtcacg 11348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 3206805 - 3206675
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggta-caaccaaccttatcctgaaaa-cgggtccagcaagccgaaaa 212  Q
    ||||||||||||||||| ||||||| ||| ||   ||| ||||||| |||||||||| | |||||||||||||| |||| |  | |||||||| ||||||    
T  3206805 aaatcgtgtcacgtttttcccaaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaa 3206706  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||| ||||||||    
T  3206705 tcgtgtcacgttttcccaaaattgtgtcacg 3206675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 3282089 - 3282218
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    ||||||||||||||||||| | |||||||| ||   ||||||||||| ||||||||||  |||||||||||| ||||||||   ||||||||   |||||    
T  3282089 caaaatcgtgtcacgtttttc-aaatcgtggcacgattggtgcgtacgacccaaggtatgaccaaccttatcttgaaaacgtacccagcaagtttgaaaa 3282187  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| ||||| |||||||||| ||||    
T  3282188 tcgtgtcacgttttctcaaaatcgtgacacg 3282218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 29652195 - 29652273
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||| ||||||||||  |||||||||||||   |||||| |||| ||||||||||| |||||||||||||||||||    
T  29652195 caaaatcatgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaggtacgaccaaccttatcctgaaaa 29652273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 37168010 - 37167948
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagc 64  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||||||||||||| ||||||    
T  37168010 tcaacctttagtatctaaaactgtaaaagttccctcctttgatttccatgagattccccaagc 37167948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 41135534 - 41135452
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 83  Q
    |||| |||||||||||||| ||  ||||| |||||||||||||||||||||||||| ||||||||||  |||||||| |||||    
T  41135534 tcaacctttagtatctaaatacattaaaatttccctcctttggtttccatgagattaaccaagcttattcaacaaatgggtca 41135452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 28242102 - 28242041
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaa 62  Q
    |||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  28242102 tcaacctttagtatctacataccctaaaagttccctcctttggttttcatgagattcaccaa 28242041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 21536285 - 21536206
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    ||||||||||||||||||||| |||||| | ||   ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  21536285 caaaatcgtgtcacgttttcc-aaatcggggcacgattggtgcgtacgacccaaggtacgaccaacctcatcctgaaaacg 21536206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 20762490 - 20762361
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||| | | | ||||||| ||||||||||||||||||| |  | ||| |||||| |||||    
T  20762490 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgttcgatcaaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 20762391  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | ||||||  ||||||||||||||||||||    
T  20762390 cgtgtcacgatttcccaaaatcgtgtcacg 20762361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 3189131 - 3189040
Alignment:
Q  154 tgcgtacaacccaaggta-caaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||| |||||||||| | |||||||||||||| |||| |  | |||||||| |||||||| |||||| |||||||||||| ||||||||    
T  3189131 tgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacg 3189040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 3197948 - 3197857
Alignment:
Q  154 tgcgtacaacccaaggta-caaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||| |||||||||| | |||||||||||||| |||| |  | |||||||| |||||||| |||||| |||||||||||| ||||||||    
T  3197948 tgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacg 3197857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 13604336 - 13604259
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| ||||||||||| ||||||||||||||||||||    
T  13604336 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 13604259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 13316666 - 13316775
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    ||||||||||||||||||| ||| | ||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  13316666 caaaatcgtgtcacgtttttccccactcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 13316765  T
Q  212 atcttgtcac 221  Q
    ||| ||||||    
T  13316766 atcgtgtcac 13316775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 13659694 - 13659778
Alignment:
Q  156 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||| ||||| ||||| |||||||||||   |  |||| ||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  13659694 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacg 13659778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 15820124 - 15820048
Alignment:
Q  116 aaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||||||| | || || |||||| ||||  |||| ||||||| ||||||||||| |||||||||||||| ||||    
T  15820124 aaatcgtgtcatggttgccaaaatcgagacatggttgatgcgtacgacccaaggtacgaccaaccttatcctaaaaa 15820048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 22819852 - 22819940
Alignment:
Q  154 tgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcac 242  Q
    ||||||| ||||||||||| ||||| ||||| ||||||||| ||| | || ||  |||||| ||||||| |||| ||||||| ||||||    
T  22819852 tgcgtacgacccaaggtacgaccaaacttattctgaaaacgtgtcaaacatgcgaaaaatcatgtcacagtttctcaaaatcatgtcac 22819940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 16455464 - 16455385
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    |||| ||||||||| ||  |||||||||| ||  |||| ||||||| ||||||||||| | ||| |||||||||||||||    
T  16455464 aaaaacgtgtcacgattggccaaatcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaacg 16455385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 194
Target Start/End: Complemental strand, 16124328 - 16124295
Alignment:
Q  161 aacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    |||||||||||| |||||||||||||||||||||    
T  16124328 aacccaaggtacgaccaaccttatcctgaaaacg 16124295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 7e-65; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 35447339 - 35447575
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||| ||   ||||    
T  35447339 tcaacctttagtatctaaaaccctaaaagttctctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcatggagtgcttacatagtg 35447438  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||||   ||||||||||| ||||||||||| | |||||||||| |||||||  | ||      
T  35447439 ttcagatccggacaaaatcgtgtcacgatttccc-aatcgtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatcttgaaaacttgcccga 35447537  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgt 239  Q
    ||| |||| |||| ||||||||||||||||||||||||    
T  35447538 caaaccgataatcgtgtcacattttcccaaaatcgtgt 35447575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 45726643 - 45726507
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| || ||| ||   ||||    
T  45726643 tcaacctttagtatctaaaaccctaaaagttccctcatttggtttccatgagattcaccaagcttacccaacaaatgggtcatggagtgcttacatagtg 45726544  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaa 138  Q
    ||||||||||  |||||||||||||| ||| ||||||    
T  45726543 ttcagatccgaacaaaatcgtgtcacatttgcccaaa 45726507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 1632187 - 1632269
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  1632187 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacacaacaaataggtcat 1632269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 2837193 - 2837322
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||| ||||||||||||||| |||||   ||||||||||| ||||||||||| ||||||||||||||||||||    ||||||||  ||||||    
T  2837193 caaaatcgtgttacgttttcccaaatcatgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttacccagcaaggtgaaaat 2837292  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||||||||    
T  2837293 cgtgtcacgttttcccaaaatcgtgtcacg 2837322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 34389233 - 34389362
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  34389233 caaaatcgtgtcacgttttcc-aaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 34389331  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||||||||    
T  34389332 tcgtgtcacgttttcccaaaatcgtgtcacg 34389362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 36318358 - 36318488
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||  ||||| ||||||  |||||||||||| |  |||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  36318358 caaaatcgtgtcacgttttgtcaaattgtgacacggttggtgcgtacgattcaaggtacgaccaaccttatcctgaaaacgtggccagcaagccgaaaat 36318457  T
Q  214 cttgtcacattttccc-aaaatcgtgtcacg 243  Q
    | |||||| ||| ||| ||||||||||||||    
T  36318458 cgtgtcacgtttccccaaaaatcgtgtcacg 36318488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 7451009 - 7450940
Alignment:
Q  7 ctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaa 76  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7451009 ctttagtatctaaaaccctaaaagttccctccttttgtttccatgagattcaccaagcttacccaacaaa 7450940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 20522604 - 20522733
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  |||||| ||||||   ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||  ||||||    
T  20522604 caaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 20522703  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| ||||| |||||||||| ||||    
T  20522704 cgtgtcacgttttctcaaaatcgtgacacg 20522733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 14698724 - 14698600
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  ||||||||||| |  |||||||||||| ||||||||||| ||||||||||||||||||| | | ||| ||||  ||||||    
T  14698724 caaaatcgtgtcacgtttgtccaaatcgtgaaatggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgcccaacaagttgaaaat 14698625  T
Q  214 cttgtcacattttcccaaaatcgtg 238  Q
    | |||||| ||||||||||||||||    
T  14698624 cgtgtcacgttttcccaaaatcgtg 14698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 17450304 - 17450222
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| || |||||||||| ||||||    
T  17450304 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattctctaagtttgcccaacaaatgggtcat 17450222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 42262064 - 42262190
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagt 100  Q
    |||| |||||||||||| | |||||||||| ||||||||||||||  ||||||||||||||||||| | |||||||| ||||| || |||| |||  |||    
T  42262064 tcaacctttagtatctacataccctaaaagctccctcctttggttctcatgagattcaccaagcttgctcaacaaatgggtcaaaggatgcttatatagt 42262163  T
Q  101 gttcagatccgggcaaaatcgtgtcac 127  Q
    ||||||||||  |||||||||||||||    
T  42262164 gttcagatccaagcaaaatcgtgtcac 42262190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 21630327 - 21630456
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||||  |||||||||||||   |||||| |||| |||||| |||| ||||||||||||||||||||| | ||||||||  ||||||    
T  21630327 caaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 21630426  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||  |||||||||||| ||| ||||    
T  21630427 cgtgtcatgttttcccaaaattgtgacacg 21630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 1632300 - 1632413
Alignment:
Q  209 aaaatcttgtcacattttcccaaaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacacggatgtcaaatcgtgtc 308  Q
    |||||| |||||| |||||| |||||||||||||||||||||| ||| | ||| ||| |||||  |||||||||||||||||||| || |||| ||||||    
T  1632300 aaaatcgtgtcacgttttcc-aaaatcgtgtcacgttttgccttcagaatcaaacattcattcggcatcagaaatcgtgacacggttgccaaaacgtgtc 1632398  T
Q  309 acgattcttcgcttt 323  Q
    |||||||||| ||||    
T  1632399 acgattcttcacttt 1632413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 33528338 - 33528209
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 213  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| | ||||||||| |||||||||   ||||||||   ||||||    
T  33528338 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgatcaaccttattctgaaaacgtacccagcaagtttgaaaat 33528239  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | |||||| |||||||||||||||| ||||    
T  33528238 cgtgtcacgttttcccaaaatcgtgacacg 33528209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 10706967 - 10706843
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    ||||||||||||||||||||| ||| |||| ||   |||||| |||| ||||||||||| |||||||||||||| ||||||  |||||||||   |||||    
T  10706967 caaaatcgtgtcacgttttcc-aaaccgtggcacgattggtgtgtacgacccaaggtacgaccaaccttatccttaaaacgtatccagcaagtttgaaaa 10706869  T
Q  213 tcttgtcacattttcccaaaatcgtg 238  Q
    || |||||| ||||||||||||||||    
T  10706868 tcgtgtcacgttttcccaaaatcgtg 10706843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 17865595 - 17865684
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaatcttgtcacattttcccaaaatcgtg 238  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   ||||||| |||||||||||||||||||||||    
T  17865595 ttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtg 17865684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 42288564 - 42288628
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagctt 66  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  42288564 tcaacctttagtatctaaaaccctaaaagttctctcatttggtttccatgagattcacctagctt 42288628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 36988423 - 36988554
Alignment:
Q  114 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaa 211  Q
    |||||||||||||| ||||||   ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||| |||||  | |||||||| |||||    
T  36988423 caaaatcgtgtcacattttccatcaatcgtgtcacaattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaa 36988522  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| |||||| ||||||||||||| |||||||    
T  36988523 atcgtgtcacgttttcccaaaatcatgtcacg 36988554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 45099575 - 45099444
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| |  |||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  45099575 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 45099476  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| ||||||| ||||||||||| ||||||||    
T  45099475 atcgtgtcacaatttcccaaaattgtgtcacg 45099444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 39483258 - 39483388
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    |||||| ||| |||||||  |||||||||||||   ||||||||||  ||||||||||| |||||||||||||||||||||   ||| ||||   |||||    
T  39483258 caaaattgtgccacgtttgtccaaatcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaa 39483357  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||| ||||    
T  39483358 tcgtgtcacgttttcccaaaatcgtgacacg 39483388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 23078186 - 23078062
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    |||||| |||||||||||||| |||||||| ||   ||||||||||| ||||||| ||| |||||||||||||||||||||   ||| ||||   |||||    
T  23078186 caaaattgtgtcacgttttcc-aaatcgtggcacgattggtgcgtacgacccaagatacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaa 23078088  T
Q  213 tcttgtcacattttcccaaaatcgtg 238  Q
    || |||||| ||||||||||||||||    
T  23078087 tcgtgtcacgttttcccaaaatcgtg 23078062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 33118517 - 33118646
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||||| ||||  |||||||||||||   ||||||||||| |||||||||||  ||||||||||| |||||| | | ||||||||  ||||||    
T  33118517 caaaatcgtgtcatgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacggccaaccttatcttgaaaatgtgcccagcaagttgaaaat 33118616  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
      |||||| |||||| |||| |||| ||||    
T  33118617 tgtgtcacgttttcctaaaaacgtgacacg 33118646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 5723604 - 5723711
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||| |  |||||||||||| |||||    
T  5723604 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgtccagcaagccaaaaat 5723703  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  5723704 cgtgtcac 5723711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 8389864 - 8389733
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaag-ccgaaa 211  Q
    ||||||||||||| ||||| ||||||| |||||   ||||||||||| |||||||||||  |||||||||||||| ||||||    |||||||   ||||    
T  8389864 caaaatcgtgtcatgtttttccaaatcatgacatgattggtgcgtacgacccaaggtacgtccaaccttatcctgaaaaacgtactcagcaagtttgaaa 8389765  T
Q  212 atcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||| |||||| |||||||||||||||| ||||    
T  8389764 atcgtgtcacgttttcccaaaatcgtgacacg 8389733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33647883 - 33647817
Alignment:
Q  1 ttcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagctt 66  Q
    ||||| |||||||||||||| || |||||||||| |||||||||||||||||| |||||||||||||    
T  33647883 ttcaacctttagtatctaaatactctaaaagttctctcctttggtttccatgaaattcaccaagctt 33647817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 39284661 - 39284587
Alignment:
Q  169 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| ||||||||||||||||||||    ||||||||||||||||  |||||| |||||||||||||||||||||    
T  39284661 gtacgaccaaccttatcctgaaaactttcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacg 39284587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 2334767 - 2334874
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||||||||||| ||   ||| || |||| ||||||||||| ||||||||||||||||||| |  | |||||||||| |||||    
T  2334767 aaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgtgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaat 2334866  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  2334867 cgtgtcac 2334874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 29867644 - 29867569
Alignment:
Q  169 gtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||||||||| |||||| |  | |||||||| |||||||| |||||| |||||||||||||||||||||    
T  29867644 gtacaaccaaccttatcttgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 29867569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 30218496 - 30218615
Alignment:
Q  10 tagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagat 108  Q
    ||||||||||| ||||||||||||||||||||||  |||||| | |||||||||| ||||||||| ||| ||||| |  |||| |||  ||||| || ||    
T  30218496 tagtatctaaataccctaaaagttccctcctttgagttccataatattcaccaagattacccaacgaataggtcaaatgatgcttatatagtgtccatat 30218595  T
Q  109 ccgggcaaaatcgtgtcacg 128  Q
    ||  |||||||| |||||||    
T  30218596 ccacgcaaaatcatgtcacg 30218615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 36206013 - 36206092
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||||| ||||||||| |||||||||||||||||||    
T  36206013 caaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacaatccaaggtacgaccaaccttatcctgaaaa 36206092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 28258891 - 28258814
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||| |||||||||| |||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  28258891 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 28258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 4503480 - 4503589
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  4503480 caaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 4503579  T
Q  212 atcttgtcac 221  Q
    ||| ||||||    
T  4503580 atcgtgtcac 4503589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 24397740 - 24397651
Alignment:
Q  39 tttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtgttcagatccgggcaaaatcgtgtcacg 128  Q
    ||||||||||||||||||||||||||||  |||||||||  | || || |||| |||  ||||||||||||| | ||||| |||||||||    
T  24397740 tttggtttccatgagattcaccaagcttttccaacaaatgagccaaaggatgcttatatagtgttcagatccagacaaaaccgtgtcacg 24397651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 17629082 - 17629022
Alignment:
Q  231 aaatcgtgtcacgttttgcctccaggaccaaccatgcattcaacatcagaaatcgtgacac 291  Q
    ||||||||||||| ||||||||||||| ||||| | |||||  | ||||||||||||||||    
T  17629082 aaatcgtgtcacgatttgcctccaggatcaaccttacattctgcctcagaaatcgtgacac 17629022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 6595406 - 6595473
Alignment:
Q  177 aaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||||||||||||||| |  | |||||||||| |||||| |||||| |||||||||||| ||||||||    
T  6595406 aaccttatcctgaaaatctagcccagcaagccaaaaatcgtgtcacgttttcccaaaattgtgtcacg 6595473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 13569712 - 13569789
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    |||||||||||||  |||| |||||||||||||   ||||||| ||| | ||||||||| | |||||||||||||||||    
T  13569712 caaaatcgtgtcaaatttttccaaatcgtgacacgattggtgcttacgatccaaggtacga-caaccttatcctgaaaa 13569789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 143
Target Start/End: Complemental strand, 7450906 - 7450877
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtg 143  Q
    ||||||||||||||||||||||||||||||    
T  7450906 caaaatcgtgtcacgttttcccaaatcgtg 7450877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 44750273 - 44750240
Alignment:
Q  35 ctcctttggtttccatgagattcaccaagcttac 68  Q
    ||||||||||||| ||||||||||||||||||||    
T  44750273 ctcctttggtttctatgagattcaccaagcttac 44750240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 45726460 - 45726415
Alignment:
Q  280 aaatcgtgacacggatgtcaaatcgtgtcacgattcttcgctttct 325  Q
    |||||||||||||| || |||||||||||||| |||||| ||||||    
T  45726460 aaatcgtgacacggttgccaaatcgtgtcacgtttcttcactttct 45726415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 39284704 - 39284672
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgaca 146  Q
    ||||||| |||||||||||||||||||||||||    
T  39284704 caaaatcatgtcacgttttcccaaatcgtgaca 39284672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 27015245 - 27015026
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattgg-tcatagaatgcatatgcagt 100  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| |||||| ||||| || |||||||||||||||   ||    
T  27015245 tcaacctttagtatctaaaaccctaaaagttccctcctttgatttccattagattcgccaagcataccca-caaatggggtcatagaatgcatatattgt 27015147  T
Q  101 gttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtcca 200  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | |||    
T  27015146 gttcagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgccca 27015047  T
Q  201 gcaagccgaaaatcttgtcac 221  Q
     ||||| ||||||| ||||||    
T  27015046 acaagctgaaaatcgtgtcac 27015026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 185
Target Start/End: Complemental strand, 38746718 - 38746535
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||   |||    
T  38746718 tcaacctttagtatctaaaaccctaaaagttctctcctttggtttccatgagattcaccaagcttacccaacaaatgagtcaaagaatgcatatattgtg 38746619  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatc 185  Q
    ||||||||||  ||||||||||||| | |||||||||| ||||||   ||||||||||| ||||||||||| ||||||||||||    
T  38746618 ttcagatccgaacaaaatcgtgtcatgatttcccaaattgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 5057761 - 5057521
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagtg 101  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||     ||||||| |||||| || ||| ||   ||||    
T  5057761 tcaacctttagtatctaaaaccctaaaagttctctcctttggtttccatgagattcacccagctcttt-aacaaatgggtcatggagtgcttacatagtg 5057663  T
Q  102 ttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccag 201  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||||||| ||||||||||||||||||||  |  ||     
T  5057662 ttcagatccggacaaaatcgtgtcacgttttcccaaattgtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcctgaaaacttgctcaa 5057563  T
Q  202 caagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| |||||||  |||||| |||| ||||||||||||||||    
T  5057562 caagtcgaaaattgtgtcacgttttaccaaaatcgtgtcacg 5057521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 42426584 - 42426713
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||| ||||||||    
T  42426584 caaaattgtgtcacgttttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaat 42426683  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
      |||||| |||||||||||||||||||||    
T  42426684 tgtgtcacgttttcccaaaatcgtgtcacg 42426713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 40146974 - 40146843
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgc--atatgcag 99  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||| || |||  | ||  ||    
T  40146974 tcaacctttagtatctaaaaccctaaaagtttcatcctttggtttccatgagattcaccaagcttaaccaacaaatgggtcatggagtgcttacatatag 40146875  T
Q  100 tgttcagatccgggcaaaatcgtgtcacgttt 131  Q
    ||||||||||| | |||||||||| |||||||    
T  40146874 tgttcagatccagacaaaatcgtgacacgttt 40146843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 213181 - 213099
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  213181 tcaacctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcatcaagcttacccaaaaaatgggtcat 213099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 13488022 - 13487895
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||    
T  13488022 caaaattgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 13487923  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    |  ||    |||||||||||||||||||||    
T  13487922 c--gtgctgttttcccaaaatcgtgtcacg 13487895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 32636643 - 32636513
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctg-aaaacgggtccagcaagccgaaaa 212  Q
    ||||||| |||||||||||||||||||||||||   ||||||||||  ||||||||||| ||||||||||||||| |||||  | |||||||| ||||||    
T  32636643 caaaatcatgtcacgttttcccaaatcgtgacacgtttggtgcgtaagacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaa 32636544  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || || ||| |||||||||||||||||||||    
T  32636543 tcgtgccacgttttcccaaaatcgtgtcacg 32636513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 19806225 - 19806118
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||| ||||||||||| |||||||||||||| |||||| | | ||||||||||||||    
T  19806225 caaaatcgtgtcacgttttcccaagtcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctaaaaacgtgcctagcaagccgaaaat 19806126  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  19806125 cgtgtcac 19806118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 16642331 - 16642414
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcat 84  Q
    |||| |||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16642331 tcaacctttagtatctaaataccctaaaagtgctctcctttggtttccatgagattcaccaagcttacccaacaaatgggtcat 16642414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 241
Target Start/End: Original strand, 16650971 - 16651098
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    |||||||||||||| |||| |||||||||||||  |||||||||||| | ||||||||| |||||||||||||||||||||   ||| ||||    ||||    
T  16650971 caaaatcgtgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaacgtacccaacaagttataaat 16651070  T
Q  214 cttgtcacattttcccaaaatcgtgtca 241  Q
    | |||||| |||||||||||||||||||    
T  16651071 cgtgtcacgttttcccaaaatcgtgtca 16651098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 27638069 - 27638131
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagc 64  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27638069 tcaacctttagtatctaaaaccttaaaagttccctcctttggtttccatgagattcaccaagc 27638131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 11916687 - 11916557
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    |||||||||||||||||||| |||||||||| |   ||||||||||| ||||||||||| |||||||| |||||||||||    ||| ||||   |||||    
T  11916687 caaaatcgtgtcacgttttctcaaatcgtgatacgattggtgcgtacgacccaaggtacgaccaacctgatcctgaaaacatacccaacaagtttgaaaa 11916588  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| |||||||||||||||| ||||    
T  11916587 tcgtgtcacgttttcccaaaatcgtgacacg 11916557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 535700 - 535615
Alignment:
Q  136 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 221  Q
    |||||||||||   ||||||| ||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  535700 aaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcac 535615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 28278028 - 28277963
Alignment:
Q  2 tcaatctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagctta 67  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  28278028 tcaacctttagtatctaaaaccctaaaagtttcctcctttagtttccttgagattcaccaagctta 28277963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 39468917 - 39468988
Alignment:
Q  150 ttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcac 221  Q
    ||||||| ||| ||||||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  39468917 ttggtgcatacgacccaaggtacgaccaaccttatcctaaaaacgtgtccagcaagccgaaaatcgtgtcac 39468988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 13239572 - 13239442
Alignment:
Q  114 caaaatcgtgtcacgttttccca-aatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaa 212  Q
    |||||| ||||||||||||||   ||||||| ||   ||| ||||||| ||||||||||| ||||||||||||||||||||  |||||||||| | || |    
T  13239572 caaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagtcaaaga 13239473  T
Q  213 tcttgtcacattttcccaaaatcgtgtcacg 243  Q
    || |||||| ||| ||||||||| |||||||    
T  13239472 tcgtgtcacgtttacccaaaatcttgtcacg 13239442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 14520612 - 14520733
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    ||||||||||||||||||||| |||||||||||   ||  ||||||| ||||||||||| |||||||||||||||||||||   ||| ||||   |||||    
T  14520612 caaaatcgtgtcacgttttcc-aaatcgtgacacgattaatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaa 14520710  T
Q  213 tcttgtcacattttcccaaaatc 235  Q
    || |||||| |||||||||||||    
T  14520711 tcgtgtcacgttttcccaaaatc 14520733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 30802644 - 30802579
Alignment:
Q  13 tatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||    
T  30802644 tatctaaataccctaaaagttccctcatttggtttccatgagattcaccaagcgtactcaacaaat 30802579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 31004868 - 31004739
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcct-gaaaacgggtccagcaagccgaaaat 213  Q
    |||| ||||||||||||  |||||||||||||   ||||||||||| |||||| |||||||||||||||||||  |||||| | ||||||||  ||| ||    
T  31004868 aaaaacgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcctaaaaaacgtgcccagcaagttgaatat 31004769  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    | | |||| |||||||| ||||||| ||||    
T  31004768 cgtatcacgttttcccacaatcgtgacacg 31004739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 40146820 - 40146739
Alignment:
Q  162 acccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||| |||||| || ||||||||||| | ||| ||||| |||||||  |||||||||||||||||||||||||||    
T  40146820 acccaaggtacgaccaactttttcctgaaaacgtgaccaacaagctgaaaatcgagtcacattttcccaaaatcgtgtcacg 40146739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 12083892 - 12083813
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacg 194  Q
    |||||| |||||||||||||| |||||||||||   ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  12083892 caaaattgtgtcacgttttcc-aaatcgtgacacgattggtgcatacgacccaaggtacgaccaaccttatcctgaaaacg 12083813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 30792954 - 30792872
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 83  Q
    |||| |||||||||||||  ||||||||||||  ||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  30792954 tcaacctttagtatctaattaccctaaaagtttactcatttggtttccatgagattcaccaagcttacttaacaaatgggtca 30792872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 42428822 - 42428896
Alignment:
Q  169 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| |||||||||||||| |||||  | |||||||||| |||||| |||||| |||||||||||||||||||||    
T  42428822 gtacgaccaaccttatcctaaaaacttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 42428896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 38746529 - 38746460
Alignment:
Q  174 accaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||| |||| ||||||  ||||||||    
T  38746529 accaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgtttttccaaaaatgtgtcacg 38746460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 16649972 - 16650044
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcc 186  Q
    ||||||| |||||| |||| |||||||||||||  |||||||||||| | ||||||||| |||||||||||||    
T  16649972 caaaatcatgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 30683312 - 30683386
Alignment:
Q  169 gtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| ||||||||||||||||||||  | | |||||| |||||||| |||||| |||||||||||| ||||||||    
T  30683312 gtacgaccaaccttatcctgaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacg 30683386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 37438925 - 37438835
Alignment:
Q  154 tgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||||| ||||||||||| || |||||||||||||||| |  | ||| |||||| |||||| |||||| ||||||||||||| |||||||    
T  37438925 tgcgtacgacccaaggtacgacaaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcatgtcacg 37438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 4160348 - 4160284
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagct 65  Q
    |||| |||||||||||||| |||||||| |||| ||| |||||||||||||||||||||| ||||    
T  4160348 tcaaactttagtatctaaataccctaaatgttctctcatttggtttccatgagattcaccgagct 4160284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 14689883 - 14689938
Alignment:
Q  22 ccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||||||||||  ||||||| |||||||||||||||||||||| ||| ||||||||    
T  14689883 ccctaaaagttttctcctttagtttccatgagattcaccaagcctactcaacaaat 14689938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 25412580 - 25412473
Alignment:
Q  116 aaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaat 213  Q
    ||||||||||||||||| ||| ||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||||||| |  | |||||||||| |||||    
T  25412580 aaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaat 25412481  T
Q  214 cttgtcac 221  Q
    | ||||||    
T  25412480 cgtgtcac 25412473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 533588 - 533542
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtac 160  Q
    |||||||||||||||||||||||||||||||||   |||||||||||    
T  533588 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtac 533542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 13342881 - 13342772
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaa 211  Q
    ||||||||||||||||||| ||| ||||||| ||   ||| ||||||| | | ||||||| ||||||||||||||||||| |  | |||||||||| |||    
T  13342881 caaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatctaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 13342782  T
Q  212 atcttgtcac 221  Q
    ||| ||||||    
T  13342781 atcgtgtcac 13342772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 30182409 - 30182329
Alignment:
Q  114 caaaatcgtgtcacgtttt--cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa 192  Q
    |||||||||||||||||||  ||| ||||||| ||   ||| ||||||| | ||||||||| |||||||||||||||||||    
T  30182409 caaaatcgtgtcacgtttttcccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 30182329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 33906586 - 33906650
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagctt 66  Q
    |||| ||||| |||||||| ||||||||||||| || ||||||||| |||||||||||||||||||    
T  33906586 tcaacctttaatatctaaataccctaaaagttctcttctttggttt-catgagattcaccaagctt 33906650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 35615885 - 35615808
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaatt 78  Q
    |||| |||||||||||||| || |||||||||   || ||||||||| | |||||||||||||||||| |||||||||    
T  35615885 tcaacctttagtatctaaatactctaaaagttttttcatttggtttcaaggagattcaccaagcttacgcaacaaatt 35615808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 9353048 - 9352971
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||| |||||||||| |||||||| ||   ||| |  |||| ||||||||||| ||||||||||||||||||||    
T  9353048 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaac 9352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10055160 - 10055237
Alignment:
Q  1 ttcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    |||||||||||||||| ||  || ||||| ||||| || |||| |||| |||||||||||||| ||||| ||||||||    
T  10055160 ttcaatctttagtatccaagtactctaaatgttccatcatttgatttctatgagattcaccaaacttactcaacaaat 10055237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 36932023 - 36931986
Alignment:
Q  156 cgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  36932023 cgtacgacccaaggtacgaccaaccttatcctgaaaac 36931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 316455 - 316419
Alignment:
Q  25 taaaagttccctcctttggtttccatgagattcacca 61  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  316455 taaaagttctctcctttagtttccatgagattcacca 316419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 241
Target Start/End: Original strand, 20764 - 20891
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaat 213  Q
    ||||||||||| ||||||| |||||||||||||   || |||||||| ||||||||||| ||||||||||| || |||||    ||| ||||||||||||    
T  20764 caaaatcgtgttacgttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtacgaccaaccttattctaaaaactttcccaacaagccgaaaat 20863  T
Q  214 cttgtcacattttcccaaaatcgtgtca 241  Q
    | |||||| |||||||||||||||||||    
T  20864 cgtgtcacgttttcccaaaatcgtgtca 20891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 59; Significance: 7e-25; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 6067 - 6189
Alignment:
Q  114 caaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaa 212  Q
    ||||||||||||||||||  |||||| ||||||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   |||||    
T  6067 caaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaa 6166  T
Q  213 tcttgtcacattttcccaaaatc 235  Q
    || ||||||||||||||||||||    
T  6167 tcgtgtcacattttcccaaaatc 6189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 2876 - 3005
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 213  Q
    |||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||| ||||||||||||||||||||    ||||||||   ||||||    
T  2876 aaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatacccagcaagtttgaaaat 2975  T
Q  214 cttgtcacattttcccaaaatcgtgtcacg 243  Q
    |  ||||| |||||||||||||||| ||||    
T  2976 cgggtcacgttttcccaaaatcgtgacacg 3005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 132993 - 132916
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||| |||||||||| |||||||| ||   ||| | ||||| ||||||||||| ||||||||||||||||||||    
T  132993 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 132916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 149455 - 149539
Alignment:
Q  156 cgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    ||||| ||||| ||||| |||||||||||   |  |||| ||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  149455 cgtacgacccacggtacgaccaaccttat---gtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacg 149539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 490899 - 491025
Alignment:
Q  2 tcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtcatagaatgcatatgcagt 100  Q
    |||| |||||||||||| | |||||||||| ||||||||||||||  ||||||||||||||||||| | |||||||| ||||| || |||| |||  |||    
T  490899 tcaacctttagtatctacataccctaaaagctccctcctttggttctcatgagattcaccaagcttgctcaacaaatgggtcaaaggatgcttatatagt 490998  T
Q  101 gttcagatccgggcaaaatcgtgtcac 127  Q
    ||||||||||  |||||||||||||||    
T  490999 gttcagatccaagcaaaatcgtgtcac 491025  T

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Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 434353 - 434221
Alignment:
Q  114 caaaatcgtgtcacgtttt-cccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagcc-gaa 210  Q
    |||||||||| |||||||| ||| ||||||| ||   ||  ||||||| | ||||||||| ||||||||||||||||||| |  | ||||||||||  ||    
T  434353 caaaatcgtgccacgtttttccccaatcgtgccacgatttatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaa 434254  T
Q  211 aatcttgtcacattttcccaaaatcgtgtcacg 243  Q
    |||| ||||||  ||||||||||||||||||||    
T  434253 aatcgtgtcacgatttcccaaaatcgtgtcacg 434221  T

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Target: scaffold0176 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 17635 - 17742
Alignment:
Q  136 aaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaagccgaaaatcttgtcacattttcccaaaatc 235  Q
    |||||||||||   ||||||||||| || || ||||| |||||||||||| ||||| |  | |||||||||| |||||| |||||| |||||||||||||    
T  17635 aaatcgtgacacgtttggtgcgtacgactcagggtacgaccaaccttatcatgaaagcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatc 17734  T
Q  236 gtgtcacg 243  Q
    ||||||||    
T  17735 gtgtcacg 17742  T

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Target: scaffold0176; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 18461 - 18530
Alignment:
Q  7 ctttagtatctaaaaccctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaat 77  Q
    ||||||||||||||||| || |||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  18461 ctttagtatctaaaacc-tataagttttctcctttggtttccatgagattcacccagcttacccaacaaat 18530  T

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Target: scaffold0087 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 248
Target Start/End: Complemental strand, 36546 - 36413
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaacgggtccagcaag-ccgaaaat 213  Q
    ||||||||| |||||||||| |||||||| ||   ||||||||||| ||||||||||| |||||||||||||||||||||   ||||||||   ||||||    
T  36546 aaaatcgtgccacgttttcc-aaatcgtgccatgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaat 36448  T
Q  214 cttgtcacattttcccaaaatcgtgtcacgttttg 248  Q
      |||||| ||||| |||||||||| |||| ||||    
T  36447 tgtgtcacgttttcacaaaatcgtgccacgatttg 36413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 43675 - 43598
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||| |||||||||| |||||||| ||   ||| | | ||| ||||||||||| ||||||||||||||||||||    
T  43675 aaaatcgtgccacgttttcc-aaatcgtgccacgattgatacatacgacccaaggtacgaccaaccttatcctgaaaac 43598  T

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Target: scaffold0197 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1859 - 1942
Alignment:
Q  1 ttcaatctttagtatctaaa-accctaaaagttccctcctttggtttccatgagattcaccaagcttacccaacaaattggtca 83  Q
    ||||| |||||||||||||| ||||||||||||| ||| |||||||||||| | |||||||||| ||||  ||||||| |||||    
T  1859 ttcaacctttagtatctaaataccctaaaagttctctcatttggtttccataaaattcaccaagtttacttaacaaataggtca 1942  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 114365 - 114278
Alignment:
Q  154 tgcgtacaacccaaggtacaaccaaccttatcctgaaaa-cgggtccagcaagccgaaaatcttgtcacattttcccaaaatcgtgtca 241  Q
    ||||||| ||||||||||| |||||||||||||||||||    | |||||||||| |||||| |||||| ||||||||| |||||||||    
T  114365 tgcgtacgacccaaggtaccaccaaccttatcctgaaaattttgcccagcaagcc-aaaatcgtgtcacgttttcccaatatcgtgtca 114278  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 45582 - 45659
Alignment:
Q  115 aaaatcgtgtcacgttttcccaaatcgtgacaatgttggtgcgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||||||| |||||||||| |||||||| ||   ||| |  |||| ||||||||||| ||||||||||||||||||||    
T  45582 aaaatcgtgccacgttttcc-aaatcgtgtcacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaac 45659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 8091 - 8054
Alignment:
Q  156 cgtacaacccaaggtacaaccaaccttatcctgaaaac 193  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  8091 cgtacgacccaaggtacgaccaaccttatcctgaaaac 8054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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