View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7282_low_3 (Length: 238)

Name: NF7282_low_3
Description: NF7282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7282_low_3
NF7282_low_3
[»] chr5 (20 HSPs)
chr5 (13-222)||(13793101-13793310)
chr5 (32-222)||(21228400-21228586)
chr5 (14-222)||(28887856-28888059)
chr5 (106-222)||(430762-430877)
chr5 (13-222)||(21614976-21615182)
chr5 (17-204)||(19860305-19860492)
chr5 (110-222)||(23452833-23452943)
chr5 (110-222)||(23460077-23460187)
chr5 (110-222)||(23464338-23464448)
chr5 (13-222)||(37190114-37190323)
chr5 (46-205)||(24227976-24228133)
chr5 (134-219)||(23491883-23491968)
chr5 (13-222)||(3671386-3671597)
chr5 (15-222)||(7726568-7726771)
chr5 (159-218)||(19403475-19403535)
chr5 (130-217)||(11339068-11339155)
chr5 (92-222)||(32968233-32968361)
chr5 (105-184)||(5453421-5453498)
chr5 (14-84)||(5453304-5453372)
chr5 (162-206)||(26561936-26561980)
[»] scaffold0236 (1 HSPs)
scaffold0236 (13-222)||(25371-25577)
[»] chr4 (14 HSPs)
chr4 (13-222)||(12246240-12246444)
chr4 (59-204)||(18274793-18274936)
chr4 (13-219)||(15116300-15116507)
chr4 (18-222)||(41167922-41168124)
chr4 (110-222)||(15853380-15853491)
chr4 (15-222)||(27959017-27959223)
chr4 (50-219)||(7187967-7188134)
chr4 (55-189)||(7966642-7966773)
chr4 (130-222)||(13814960-13815053)
chr4 (106-218)||(43283539-43283649)
chr4 (87-222)||(34198244-34198377)
chr4 (132-218)||(42706755-42706840)
chr4 (163-217)||(18496624-18496678)
chr4 (55-186)||(41258426-41258551)
[»] chr6 (17 HSPs)
chr6 (13-222)||(22364236-22364443)
chr6 (13-222)||(18383672-18383878)
chr6 (13-219)||(25369442-25369645)
chr6 (47-222)||(21411432-21411605)
chr6 (106-222)||(7830004-7830119)
chr6 (96-222)||(21927325-21927448)
chr6 (106-222)||(33322682-33322798)
chr6 (55-202)||(25649238-25649381)
chr6 (55-219)||(12311049-12311210)
chr6 (114-222)||(16889906-16890013)
chr6 (60-205)||(21621108-21621250)
chr6 (46-219)||(17791189-17791367)
chr6 (55-204)||(17085593-17085740)
chr6 (55-131)||(33540277-33540352)
chr6 (160-218)||(18396832-18396891)
chr6 (48-205)||(22846104-22846258)
chr6 (110-222)||(15080952-15081061)
[»] chr3 (22 HSPs)
chr3 (17-222)||(12019889-12020091)
chr3 (13-222)||(17202604-17202810)
chr3 (13-222)||(25769182-25769387)
chr3 (13-222)||(15874159-15874362)
chr3 (13-222)||(11330976-11331183)
chr3 (13-222)||(14061257-14061464)
chr3 (48-205)||(34557850-34558004)
chr3 (13-222)||(55443891-55444098)
chr3 (106-203)||(12490918-12491014)
chr3 (60-203)||(48419626-48419767)
chr3 (134-218)||(14286975-14287060)
chr3 (13-213)||(39653816-39654015)
chr3 (48-222)||(15515571-15515745)
chr3 (55-205)||(33371409-33371557)
chr3 (159-222)||(11063274-11063338)
chr3 (110-222)||(12563640-12563749)
chr3 (159-218)||(17537203-17537263)
chr3 (159-218)||(30204348-30204408)
chr3 (161-218)||(11199708-11199766)
chr3 (159-205)||(6230805-6230852)
chr3 (159-221)||(40937601-40937664)
chr3 (164-222)||(18009265-18009321)
[»] chr1 (13 HSPs)
chr1 (17-221)||(17021523-17021723)
chr1 (48-219)||(17606894-17607062)
chr1 (13-205)||(37235959-37236150)
chr1 (48-205)||(22837644-22837800)
chr1 (14-222)||(27672752-27672959)
chr1 (138-222)||(36358431-36358515)
chr1 (55-222)||(21193126-21193290)
chr1 (13-154)||(51658403-51658541)
chr1 (164-222)||(19601158-19601215)
chr1 (171-222)||(38035715-38035764)
chr1 (179-218)||(51658543-51658582)
chr1 (13-131)||(19601248-19601367)
chr1 (132-204)||(22148521-22148592)
[»] scaffold0013 (1 HSPs)
scaffold0013 (13-222)||(33442-33649)
[»] chr7 (27 HSPs)
chr7 (13-222)||(17230108-17230316)
chr7 (13-219)||(5617424-5617628)
chr7 (13-219)||(16929964-16930168)
chr7 (13-219)||(16935347-16935551)
chr7 (48-219)||(9609212-9609380)
chr7 (48-219)||(9836784-9836952)
chr7 (55-205)||(48345569-48345716)
chr7 (87-222)||(10862994-10863128)
chr7 (55-219)||(34243186-34243345)
chr7 (13-222)||(13375654-13375858)
chr7 (55-205)||(14278949-14279095)
chr7 (13-205)||(16915630-16915822)
chr7 (60-222)||(13387955-13388113)
chr7 (109-218)||(13272878-13272987)
chr7 (13-147)||(15914417-15914547)
chr7 (48-222)||(9058655-9058828)
chr7 (162-219)||(16651365-16651422)
chr7 (162-219)||(17625725-17625782)
chr7 (159-221)||(16574652-16574714)
chr7 (159-221)||(16590948-16591010)
chr7 (130-218)||(11284990-11285078)
chr7 (130-218)||(13845150-13845238)
chr7 (13-222)||(49049870-49050079)
chr7 (130-218)||(12250203-12250291)
chr7 (130-218)||(18306096-18306184)
chr7 (130-189)||(15628673-15628731)
chr7 (164-222)||(15953758-15953816)
[»] chr2 (19 HSPs)
chr2 (13-222)||(40642335-40642539)
chr2 (61-222)||(25303551-25303710)
chr2 (55-219)||(32738434-32738595)
chr2 (48-205)||(19435958-19436112)
chr2 (13-222)||(24089428-24089634)
chr2 (12-145)||(9782902-9783033)
chr2 (110-219)||(23823594-23823702)
chr2 (110-219)||(23825538-23825646)
chr2 (110-222)||(22582096-22582208)
chr2 (130-216)||(7319375-7319460)
chr2 (106-222)||(22653995-22654112)
chr2 (13-220)||(32247-32452)
chr2 (50-187)||(19648084-19648218)
chr2 (130-218)||(28969853-28969941)
chr2 (87-222)||(5341-5474)
chr2 (61-205)||(43640330-43640473)
chr2 (129-222)||(24573541-24573633)
chr2 (159-218)||(25599802-25599862)
chr2 (164-222)||(720351-720409)
[»] chr8 (19 HSPs)
chr8 (13-222)||(17283200-17283406)
chr8 (16-222)||(23833230-23833438)
chr8 (14-222)||(22737981-22738180)
chr8 (13-222)||(21192730-21192936)
chr8 (13-219)||(26009399-26009603)
chr8 (13-189)||(5851499-5851672)
chr8 (13-222)||(21200156-21200362)
chr8 (13-220)||(38531528-38531736)
chr8 (55-222)||(15931288-15931453)
chr8 (110-220)||(25293496-25293605)
chr8 (110-220)||(25755485-25755594)
chr8 (13-205)||(29295861-29296050)
chr8 (134-222)||(17731653-17731742)
chr8 (110-222)||(21695547-21695656)
chr8 (47-222)||(39448849-39449027)
chr8 (50-189)||(23229333-23229467)
chr8 (130-218)||(21679094-21679182)
chr8 (46-205)||(18770169-18770327)
chr8 (132-186)||(37655764-37655817)
[»] scaffold0025 (1 HSPs)
scaffold0025 (13-222)||(51277-51484)
[»] scaffold0010 (1 HSPs)
scaffold0010 (13-219)||(29072-29276)
[»] scaffold0107 (1 HSPs)
scaffold0107 (55-205)||(11419-11566)
[»] scaffold0022 (2 HSPs)
scaffold0022 (13-222)||(107555-107762)
scaffold0022 (46-219)||(106933-107104)
[»] scaffold0031 (3 HSPs)
scaffold0031 (55-205)||(99236-99383)
scaffold0031 (159-222)||(29971-30035)
scaffold0031 (159-222)||(68244-68308)
[»] scaffold0009 (1 HSPs)
scaffold0009 (13-219)||(66510-66714)
[»] scaffold0092 (1 HSPs)
scaffold0092 (13-222)||(1302-1507)
[»] scaffold0047 (1 HSPs)
scaffold0047 (55-200)||(2162-2304)
[»] scaffold0090 (1 HSPs)
scaffold0090 (55-204)||(7188-7333)
[»] scaffold0058 (1 HSPs)
scaffold0058 (110-222)||(72318-72429)
[»] scaffold0808 (1 HSPs)
scaffold0808 (13-187)||(3541-3712)
[»] scaffold0151 (1 HSPs)
scaffold0151 (48-219)||(31679-31850)
[»] scaffold0095 (1 HSPs)
scaffold0095 (47-222)||(7692-7870)
[»] scaffold0589 (1 HSPs)
scaffold0589 (13-222)||(5750-5956)
[»] scaffold0503 (1 HSPs)
scaffold0503 (106-216)||(9336-9445)
[»] scaffold0021 (3 HSPs)
scaffold0021 (55-219)||(19858-20019)
scaffold0021 (55-219)||(29434-29595)
scaffold0021 (159-218)||(9527-9587)
[»] scaffold0032 (1 HSPs)
scaffold0032 (50-189)||(106650-106786)
[»] scaffold1068 (1 HSPs)
scaffold1068 (13-125)||(1310-1421)
[»] scaffold0407 (2 HSPs)
scaffold0407 (130-218)||(3953-4041)
scaffold0407 (130-218)||(10419-10507)
[»] scaffold0044 (1 HSPs)
scaffold0044 (159-218)||(93909-93969)
[»] scaffold0014 (1 HSPs)
scaffold0014 (130-222)||(144637-144728)
[»] scaffold0121 (1 HSPs)
scaffold0121 (159-218)||(6951-7010)
[»] scaffold0396 (1 HSPs)
scaffold0396 (130-218)||(14412-14500)
[»] scaffold0193 (1 HSPs)
scaffold0193 (55-222)||(2908-3072)
[»] scaffold0132 (2 HSPs)
scaffold0132 (130-222)||(3182-3274)
scaffold0132 (130-222)||(11142-11234)
[»] scaffold0434 (1 HSPs)
scaffold0434 (159-204)||(2592-2638)
[»] scaffold0028 (2 HSPs)
scaffold0028 (50-144)||(70341-70431)
scaffold0028 (101-221)||(77699-77818)
[»] scaffold0610 (1 HSPs)
scaffold0610 (130-218)||(2771-2859)
[»] scaffold0247 (1 HSPs)
scaffold0247 (130-218)||(16698-16786)
[»] scaffold0175 (1 HSPs)
scaffold0175 (93-204)||(7260-7370)
[»] scaffold0138 (1 HSPs)
scaffold0138 (46-205)||(24460-24620)
[»] scaffold0507 (1 HSPs)
scaffold0507 (171-219)||(5556-5604)
[»] scaffold0023 (1 HSPs)
scaffold0023 (170-218)||(91903-91951)
[»] scaffold0006 (1 HSPs)
scaffold0006 (55-119)||(199414-199476)
[»] scaffold0051 (1 HSPs)
scaffold0051 (130-204)||(55846-55921)


Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 13793310 - 13793101
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13793310 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgtcgggacttggagaacatttat 13793211  T
Q  113 gttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttga 212  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13793210 gttgatgtattttttatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttga 13793111  T
Q  213 attttgtatg 222  Q
    ||||||||||    
T  13793110 attttgtatg 13793101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 32 - 222
Target Start/End: Original strand, 21228400 - 21228586
Alignment:
Q  32 ttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatat 131  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| | |||||| ||||| |||||||| |||||| ||||||||||||||||||||||||    
T  21228400 ttatgttggtctagatt-atctgtttggatttattcatgttggagaattaccc-ttttgtcgggacttagagaacttttatgttgatgtatttttgatat 21228497  T
Q  132 tcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
     ||| |||||||||||||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  21228498 -cataacatgtatgcttcgaagtatct-ggtttatatccgctgcgactgttgagatttttatgcatgcatgttgaatttgaattttgtatg 21228586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 28888059 - 28887856
Alignment:
Q  14 ctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaa-catttat 112  Q
    |||||||||||||||||||| ||||| |||| ||| || ||||||||||||||||||||||| |||||||| || |   |||| |||||||  |||||||    
T  28888059 ctctgatctaggcgtctgtt-tgttg-tctagatt-atttgtttggatttattcatgttggagatttacccattgtt--gggatttggagattcatttat 28887965  T
Q  113 gttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||| |||||||| ||||    
T  28887964 gttgatgtattatttgat--tcatgacatgtatgcttcgaagtattctggtttatatccgctacgactgttgagatttttatgcattcatgttgaatttg 28887867  T
Q  212 aattttgtatg 222  Q
     ||||||||||    
T  28887866 gattttgtatg 28887856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 430877 - 430762
Alignment:
Q  106 catttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||||    
T  430877 catttatgttgatgtattattta-attcatgacatgtatgcttcgaagtattcaggtttatatccgctgcgactgttgagatttatatgcatgcatgttg 430779  T
Q  206 actttgaattttgtatg 222  Q
    | |||||||||||||||    
T  430778 aatttgaattttgtatg 430762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 21615182 - 21614976
Alignment:
Q  13 gctctgatctaggcgtctgt-tatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    ||||| ||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||| |  ||||||| ||| | ||||||||||||||||||||    
T  21615182 gctctaatccaggcgtctgtctatgttggtctagatt-atctgtttggatttattcatgttgaaggtttacccattt-gtcgggacttggagaacattta 21615085  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    |||| |||||||||||||| ||||| |||||||| || ||||||| | | || ||||| ||||||| |||||||||||| ||| |||||||||||  |||    
T  21615084 tgttaatgtatttttgata-tcatggcatgtatg-tttgaagtatatggtttatatatccgctgcggctgttgagatttttatacatgcatgttg-tttt 21614988  T
Q  211 gaattttgtatg 222  Q
    | ||||||||||    
T  21614987 ggattttgtatg 21614976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 204
Target Start/End: Complemental strand, 19860492 - 19860305
Alignment:
Q  17 tgatctaggcgtctgtt-atgttggtctaaat-ttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgt 114  Q
    ||||||||||||||||| ||||| ||||| || |||| | ||||||||||||||||||||  |||||||| | ||| |||||||||||||||||||||||    
T  19860492 tgatctaggcgtctgtttatgtttgtctagatcttatgt-tttggatttattcatgttggggatttaccc-tgttgtcgggacttggagaacatttatgt 19860395  T
Q  115 tgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgtt 204  Q
    |||||||||||||||| || ||||||||||| || ||||||| | | || |||||||| ||||||| ||||||||| ||| ||||||||||    
T  19860394 tgatgtatttttgata-tcttgacatgtatgttttgaagtatatggcttatatattcgttgcgactattgagatttttatacatgcatgtt 19860305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 23452943 - 23452833
Alignment:
Q  110 tatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| ||||||  ||||||||||||| |||||||||||| |||||||||| |||||||||||||||| ||| |||||||||||||||| |    
T  23452943 tatgttgatgtattatttgat--tcatgacatgtatacttcgaagtattctggtttatatccgctgcgactgttgag-tttatatgcatgcatgttgaat 23452847  T
Q  209 ttgaattttgtatg 222  Q
    ||||||||||||||    
T  23452846 ttgaattttgtatg 23452833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 23460187 - 23460077
Alignment:
Q  110 tatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| ||||||  ||||||||||||| |||||||||||| |||||||||| |||||||||||||||| ||| |||||||||||||||| |    
T  23460187 tatgttgatgtattatttgat--tcatgacatgtatacttcgaagtattctggtttatatccgctgcgactgttgag-tttatatgcatgcatgttgaat 23460091  T
Q  209 ttgaattttgtatg 222  Q
    ||||||||||||||    
T  23460090 ttgaattttgtatg 23460077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 23464448 - 23464338
Alignment:
Q  110 tatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| ||||||  ||||||||||||| |||||||||||| |||||||||| |||||||||||||||| ||| |||||||||||||||| |    
T  23464448 tatgttgatgtattatttgat--tcatgacatgtatacttcgaagtattctggtttatatccgctgcgactgttgag-tttatatgcatgcatgttgaat 23464352  T
Q  209 ttgaattttgtatg 222  Q
    ||||||||||||||    
T  23464351 ttgaattttgtatg 23464338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 37190114 - 37190323
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatt---tattcatgttggaaatttaccccttttgccgggacttggagaacat 108  Q
    ||||||||||||||||||||| |||||||| || ||| |||||||||||||   |||||||||||||  ||||||| || |   ||||||||||||||||    
T  37190114 gctctgatctaggcgtctgtttatgttggtttagatt-atctgtttggattatttattcatgttggaggtttacccattgtt--gggacttggagaacat 37190210  T
Q  109 ttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttgac 207  Q
    ||||||||||||| |||||||| ||||| |||||||| || ||||||| | | || |||||| ||||||| |||| |||||| ||  |||||||||||      
T  37190211 ttatgttgatgtacttttgata-tcatggcatgtatgttttgaagtatatggtttatatatttgctgcgaatgttaagatttttagacatgcatgttg-t 37190308  T
Q  208 tttgaattttgtatg 222  Q
    |||||||||||||||    
T  37190309 tttgaattttgtatg 37190323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 24227976 - 24228133
Alignment:
Q  46 atttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatg 145  Q
    |||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||||  ||||||   ||||| |||||||| ||||| ||||||||    
T  24227976 atttatctgtttggatttattcatgttggagatttatccattttgtcgggacttggagaatttttatgactatgta-ttttgata-tcatggcatgtatg 24228073  T
Q  146 cttcgaagtattttggtttatattcgctgcgactgttgag-atttgtatgcatgcatgttg 205  Q
    ||| |||||| | |||||||||| |||||||||||||| | |||| ||| |||||||||||    
T  24228074 ctttgaagta-tatggtttatatccgctgcgactgttgggaatttttatacatgcatgttg 24228133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 23491968 - 23491883
Alignment:
Q  134 atgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    ||||||||||||||| |||||||| |||||||||| ||||| ||||||||| |||| ||||||||||||| || ||||||||||||    
T  23491968 atgacatgtatgctttgaagtattctggtttatatccgctgtgactgttgaaatttttatgcatgcatgtcgaatttgaattttgt 23491883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 3671597 - 3671386
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaa-cattt 110  Q
    |||||||||||||||| |||| |||| |||||| ||| || |||||||||| |||||||||||| |||||||| || |   || | |||||||  ||| |    
T  3671597 gctctgatctaggcgtttgtttatgtcggtctagatt-atatgtttggatt-attcatgttggagatttacccattgtt--ggaatttggagattcatct 3671502  T
Q  111 atgttgatgtatttttgat---attcatgacatgtatgcttcgaagtattttggtttatatt--cgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    |||||||||||| | | ||   ||||||||||||||||| | |||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||     
T  3671501 atgttgatgtatatattatttgattcatgacatgtatgccttgaagtattctggtttatatatccgctgcgactattgagatttttatgcatgcatgtt- 3671403  T
Q  206 actttgaattttgtatg 222  Q
    | |||||||||||||||    
T  3671402 attttgaattttgtatg 3671386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 222
Target Start/End: Complemental strand, 7726771 - 7726568
Alignment:
Q  15 tctgatctaggcgtctgttatgttggtctaaatttatctgtttggattt-attcatgttggaaatttaccccttttgccgggacttggagaa-catttat 112  Q
    ||||||||||||||||||||  ||   ||| | |||| ||||||||||| |||||||||||| |||||||  || |   |||| |||||||  ||| |||    
T  7726771 tctgatctaggcgtctgttagatttc-ctagagttatttgtttggattttattcatgttggagatttaccggttgtt--gggatttggagattcatctat 7726675  T
Q  113 gttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    ||||||||||| |||| |  |||||||||||||  ||||||||||| |||||||||| |||||||||| |||||| || |||||||||||| ||| ||||    
T  7726674 gttgatgtattatttggt--tcatgacatgtata-ttcgaagtattctggtttatatccgctgcgactattgaga-ttatatgcatgcatgatgaatttg 7726579  T
Q  212 aattttgtatg 222  Q
    |||||||||||    
T  7726578 aattttgtatg 7726568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 19403535 - 19403475
Alignment:
Q  159 tggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  19403535 tggtttatattccgctgcgactgttgagatttatatgcatgcatgttgagtttgaattttg 19403475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 11339068 - 11339155
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaatttt 217  Q
    |||||||||||||||  || || ||| | |||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||||||    
T  11339068 attcatgacatgtatatttgga-gtactctggtttatattccgctacgactgttgagatttatatgcatgcatgttgagtttgaatttt 11339155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 32968233 - 32968361
Alignment:
Q  92 cgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttg 190  Q
    ||||||||||||||| || ||| | ||||||||||||| | |||||||||||||||  ||  ||| | | || ||||| |||||||||| |||||||||     
T  32968233 cgggacttggagaactttcatgattatgtatttttgatgt-catgacatgtatgctg-gatttatatggtttatatatccgctgcgactattgagatttt 32968330  T
Q  191 tatgcatgcatgttgactttgaattttgtatg 222  Q
    |||||||||||| ||| |||||||||||||||    
T  32968331 tatgcatgcatg-tgaatttgaattttgtatg 32968361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 5453421 - 5453498
Alignment:
Q  105 acatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttga 184  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||| ||| || | |||||||||| ||||||| |||||||    
T  5453421 acatttgtgttgatgtatttttgata-tcatggcatgtatgctttgaatta-tatggtttatatccgctgcggctgttga 5453498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 5453304 - 5453372
Alignment:
Q  14 ctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccc 84  Q
    ||||||||||| ||||||||||||||||||| | |||| || || ||||||||||||||||  ||||||||    
T  5453304 ctctgatctagacgtctgttatgttggtctaga-ttatttg-ttagatttattcatgttggcgatttaccc 5453372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 26561936 - 26561980
Alignment:
Q  162 tttatattcgctgcgactgttgagatttgtatgcatgcatgttga 206  Q
    ||||||| ||||||||||||||||| || ||| ||||||||||||    
T  26561936 tttatatccgctgcgactgttgagaattttatacatgcatgttga 26561980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 25371 - 25577
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    |||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||| | ||||||||||||||||||||    
T  25371 gctctgatctagacgtctgtttatgttggtctaaatt-atctgtttggatttattcatgttggaggtttacccattt-gtcgggacttggagaacattta 25468  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  25469 tgttgatgtatttttgatat-catgccatgtatgcttcgaagtattt-ggtttatatccgctgcgactgttgagatttttatgcatgcatgttgaatttg 25566  T
Q  212 aattttgtatg 222  Q
    |||||||||||    
T  25567 aattttgtatg 25577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 7e-67; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 12246240 - 12246444
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    ||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||||| |||||||| |||||  ||||||||| |||||||||    
T  12246240 gctctgatctaggtgtctgtttatgttggtctagatt-atctgtttggatttattcatgttggagatttaccc-ttttgttgggacttggcgaacattta 12246337  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  12246338 tgttgatgtattttg---attcatgacatgtatgcttcgaagtattttggtttatatccgctgcgactgttgagattt-tatgcatgcatgttgaatttg 12246433  T
Q  212 aattttgtatg 222  Q
    |||||||||||    
T  12246434 aattttgtatg 12246444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 18274936 - 18274793
Alignment:
Q  59 gatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattt 158  Q
    ||||||||||||||||| |||||||| |||| | |||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||| ||| |    
T  18274936 gatttattcatgttggagatttacccatttttc-gggacttggagaacttttatgttgatgtacttttgatat-catgacatgtatgctttgaattatat 18274839  T
Q  159 tggtttatattcgctgcgactgttgagatttgtatgcatgcatgtt 204  Q
     ||||||||| | |||||||||||||||||| ||| ||||||||||    
T  18274838 gggtttatatccactgcgactgttgagatttttatacatgcatgtt 18274793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 15116300 - 15116507
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaattta--tctgttt-ggatttattcatgttggaaatttaccccttttgccgggacttggagaa-cat 108  Q
    |||||||||||||||||||||||||  ||||| |||    ||||||| |||||||||| ||||||| |||||||| || |   |||| |||||||  |||    
T  15116300 gctctgatctaggcgtctgttatgtcagtctagattatcttctgttttggatttattcttgttggagatttacccattgtt--gggatttggagattcat 15116397  T
Q  109 ttatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgac 207  Q
     |||||||||||||| ||||||  ||||||||||||||| | |||||||| | |||||||| |||||||||||||||||||| ||||||||||||||||     
T  15116398 ctatgttgatgtattatttgat--tcatgacatgtatgccttgaagtattctagtttatatccgctgcgactgttgagatttttatgcatgcatgttgaa 15116495  T
Q  208 tttgaattttgt 219  Q
    ||||||||||||    
T  15116496 tttgaattttgt 15116507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 41167922 - 41168124
Alignment:
Q  18 gatctaggcgtctgttatgttggtctaaatttatctgtttggatt---tattcatgttggaaatttaccccttttgccgggacttggagaacatttatgt 114  Q
    |||||||||||||||| |||||||||| ||| || ||||||||||   ||||| ||||||| |||||||| || |   ||||  |||||| |||||||||    
T  41167922 gatctaggcgtctgtt-tgttggtctagatt-atttgtttggattatatattcgtgttggagatttacccattgtt--gggatatggagatcatttatgt 41168017  T
Q  115 tgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaa 213  Q
    ||||||||| ||||||  |||||||||| |||||||||||||||||||||||||| | ||||||||||| |||||| ||| |||||||||||| |||| |    
T  41168018 tgatgtattatttgat--tcatgacatgcatgcttcgaagtattttggtttatatccactgcgactgttaagatttttatacatgcatgttgaatttgga 41168115  T
Q  214 ttttgtatg 222  Q
    |||| ||||    
T  41168116 ttttctatg 41168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 15853380 - 15853491
Alignment:
Q  110 tatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||| |      
T  15853380 tatgttgatgtattatttgat--tcatgacatgtatgcttcgaagtattctggtttatatccgctgcgactgttgagatttttatgcatgcatgttaaag 15853477  T
Q  209 ttgaattttgtatg 222  Q
    ||||||||||||||    
T  15853478 ttgaattttgtatg 15853491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 222
Target Start/End: Complemental strand, 27959223 - 27959017
Alignment:
Q  15 tctgatctaggcgtctgttatgttggtctaaatttatctgtttggattt-attcatgttggaaatttaccccttttgccgggacttggagaa-catttat 112  Q
    ||||||||||||||||||||  ||   ||| |||||| ||||||||||| |||||||||||| |||||||| || |   |||| |||||||  ||| |||    
T  27959223 tctgatctaggcgtctgttagatttc-ctagatttatgtgtttggattttattcatgttggagatttacccgttgtt--gggatttggagattcatctat 27959127  T
Q  113 gttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttga 212  Q
    ||||||||||| ||   |||||| | ||||||||||| ||||||| |||||||||| |||||||||||||||||| | |||||||||||| ||| |||||    
T  27959126 gttgatgtattattttgattcataaaatgtatgcttcaaagtattctggtttatatccgctgcgactgttgagatctatatgcatgcatgatgaatttga 27959027  T
Q  213 attttgtatg 222  Q
    ||||||||||    
T  27959026 attttgtatg 27959017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 219
Target Start/End: Original strand, 7187967 - 7188134
Alignment:
Q  50 atctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtat-ttttgatattcatgacatgtatgctt 148  Q
    |||| ||||| ||||||||||||||| |||||||| |||||  |||||||||||||| ||||||||||||||| ||||||   |||||  ||||||||||    
T  7187967 atctatttggttttattcatgttggatatttaccc-ttttgttgggacttggagaac-tttatgttgatgtatcttttgaatatcatggaatgtatgctt 7188064  T
Q  149 cgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
     ||||||| | | ||||||| ||||| ||||| |||||||| |||||||||||||||| |||| |||||||    
T  7188065 tgaagtatat-gctttatatccgctgtgactgatgagatttttatgcatgcatgttgattttggattttgt 7188134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 7966642 - 7966773
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    |||||||||||||||| |||| |||||||| ||| | ||||| || |||||| |||||||||||||||||||||||| |||| ||||||||||| |||      
T  7966642 tttggatttattcatgatggagatttacccattt-gtcgggaattagagaacttttatgttgatgtatttttgatat-catggcatgtatgctttgaaac 7966739  T
Q  155 attttggtttatattcgctgcgactgttgagattt 189  Q
    || | ||||||||||||||||||||||||||||||    
T  7966740 atat-ggtttatattcgctgcgactgttgagattt 7966773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 13814960 - 13815053
Alignment:
Q  130 attcatgacatgtat-gcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    ||||||||||||||| | ||||||||||| |||||||||| |||||| ||||||||||||  |||||||||||||||| |||||||||||||||    
T  13814960 attcatgacatgtattgtttcgaagtattctggtttatatccgctgcaactgttgagattattatgcatgcatgttgaatttgaattttgtatg 13815053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 43283539 - 43283649
Alignment:
Q  106 catttatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgtt 204  Q
    |||||||||||||||||| ||||||  |||| ||||||||||||||||||||| |||||||||  ||||||||||||  |||||| ||||||||||||||    
T  43283539 catttatgttgatgtattatttgat--tcataacatgtatgcttcgaagtattctggtttata-ccgctgcgactgtgaagatttatatgcatgcatgtt 43283635  T
Q  205 gactttgaattttg 218  Q
     | ||||| |||||    
T  43283636 caatttgagttttg 43283649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 34198244 - 34198377
Alignment:
Q  87 tttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgag 185  Q
    |||| ||||||||||||||| || ||| | ||||||||| ||||| |||| ||||||||||| ||  ||| | | || ||||| ||||||||||||||||    
T  34198244 tttgtcgggacttggagaactttcatgattatgtattttcgatat-catggcatgtatgctt-gatttatatggtttatatatccgctgcgactgttgag 34198341  T
Q  186 atttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||| |||||||||||| ||| |||||||||||||||    
T  34198342 atttttatgcatgcatg-tgaatttgaattttgtatg 34198377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 42706840 - 42706755
Alignment:
Q  132 tcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    ||||| |||||||| || ||||||| | | ||||||| ||||||||||| |||||||| |||||||||||||||| |||| ||||||    
T  42706840 tcatggcatgtatgttttgaagtatat-gatttatatccgctgcgactgatgagatttctatgcatgcatgttgattttggattttg 42706755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 18496624 - 18496678
Alignment:
Q  163 ttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaatttt 217  Q
    ||||||||||||||| ||||||| ||| |||||||| ||||||  ||||||||||    
T  18496624 ttatattcgctgcgaatgttgaggtttatatgcatgtatgttggttttgaatttt 18496678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 186
Target Start/End: Original strand, 41258426 - 41258551
Alignment:
Q  55 tttggatttattcatgtt-ggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaag 153  Q
    |||||||||||||||||| ||| |||||||| ||| | |||||||||||  || || ||| | ||||||||  ||||| |||| |||||||| || ||||    
T  41258426 tttggatttattcatgtttggagatttacccattt-gtcgggacttgga--actttcatgattatgtattt--gatat-catggcatgtatgttttgaag 41258519  T
Q  154 tattttggtttatattcgctgcgactgttgaga 186  Q
    ||| | ||||||||| |||||||||||||||||    
T  41258520 tatat-ggtttatatccgctgcgactgttgaga 41258551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 22364236 - 22364443
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||  |||||||| ||||| | ||||||| |||| |||||    
T  22364236 gctctgatctaggcgtctgtttatgttggtctagatt-atctgtttggatttattcatgttggggatttaccc-ttttgtcaggacttgaagaatattta 22364333  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||| ||||    
T  22364334 tgttgatgtatttgtgatat-catgacatgtatgcttcgaagtattttggtatatatccgctgcgactgttgagatttttgtgcatgcatgttgaatttg 22364432  T
Q  212 aattttgtatg 222  Q
    |||||||||||    
T  22364433 aattttgtatg 22364443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 18383672 - 18383878
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||| | |||| |||||||||||||||    
T  18383672 gctctgatctaggcatctgtttatgttggtctagatttatctgtt-ggaattattcatgttggagatttaccccttt-gtcggggcttggagaacattta 18383769  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    |||| ||||||||||| |  ||||||||||| |||||||||| |||||||||||||| |||||||||| ||||||||| |||||||||||| |||  |||    
T  18383770 tgttaatgtatttttgtt--tcatgacatgtgtgcttcgaagcattttggtttatatccgctgcgactattgagatttttatgcatgcatgctgaaattg 18383867  T
Q  212 aattttgtatg 222  Q
    |||||||||||    
T  18383868 aattttgtatg 18383878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 25369442 - 25369645
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaa-cattt 110  Q
    ||||||||||||||||||||| |||| |||||| ||| || |||| |||||||||||||||||| |||||||| || |   |||| |||||||  ||| |    
T  25369442 gctctgatctaggcgtctgtttatgtcggtctagatt-atatgtt-ggatttattcatgttggagatttacccattgtt--gggatttggagattcatct 25369537  T
Q  111 atgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactt 209  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||    
T  25369538 atgttgatgtattatttgat--tcatgacatgtatgcttcgaagtattatggtttatatccgctgcgactgttgagatttttatgcatgcatgttgaatt 25369635  T
Q  210 tgaattttgt 219  Q
    ||||||||||    
T  25369636 tgaattttgt 25369645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 222
Target Start/End: Original strand, 21411432 - 21411605
Alignment:
Q  47 tttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaa-catttatgttgatgtatttttgatattcatgacatgtatg 145  Q
    ||||| ||||| ||||||||||||||||| |||||||| || |   |||| ||| |||  ||| |||||||||||||| || | ||||||||||||||||    
T  21411432 tttatatgtttcgatttattcatgttggagatttacccattgtt--gggatttgaagattcatctatgttgatgtattattta-attcatgacatgtatg 21411528  T
Q  146 cttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||| ||||||| |||||||||| |||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  21411529 cttcaaagtattctggtttatatccgctgcgactgtagagatttttatgcatgcatgttgaatttgaattttgtatg 21411605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 7830004 - 7830119
Alignment:
Q  106 catttatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgtt 204  Q
    ||||||| |||||||||| ||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||    
T  7830004 catttatattgatgtattatttgat--tcatgacatgtatgcttcgaagtattctggtttatatccgctgcgactgttgagatttttattcatgcatgtt 7830101  T
Q  205 gactttgaattttgtatg 222  Q
    || |||||||||||||||    
T  7830102 gaatttgaattttgtatg 7830119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 21927325 - 21927448
Alignment:
Q  96 acttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgc 195  Q
    |||||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| ||| |    
T  21927325 acttggcgaacatttatgttgatgtattttg---attcatgacatgtatgcttcgaagtattttggtttatatccgctgcaattgttgagatttttatac 21927421  T
Q  196 atgcatgttgactttgaattttgtatg 222  Q
    |||||||| || ||| |||||||||||    
T  21927422 atgcatgtcgaatttaaattttgtatg 21927448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 33322798 - 33322682
Alignment:
Q  106 catttatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgtt 204  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  33322798 catttatgttgatgtattatttgat--tcatgacatgtatgcttcgatgtattctggtttatatccgctgcgactgttgagatttttatgcatgcatgtt 33322701  T
Q  205 gact-ttgaattttgtatg 222  Q
    || | ||||||||||||||    
T  33322700 gaatattgaattttgtatg 33322682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 25649381 - 25649238
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    ||||||||||||||||||||| |||||||| | | | ||||||||||||||| |||||||||||||| |||||||||| |||| ||||||||||  ||||    
T  25649381 tttggatttattcatgttggagatttacccatgt-gtcgggacttggagaacttttatgttgatgta-ttttgatatt-atgatatgtatgctttaaagt 25649285  T
Q  155 attttggtttatattcgctgcgactgttgagatttgtatgcatgcatg 202  Q
    | | |||||| ||| |||||||||| ||||||||| ||||||||||||    
T  25649284 a-tatggtttgtatccgctgcgactattgagatttttatgcatgcatg 25649238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 12311049 - 12311210
Alignment:
Q  55 tttggatttattcatgtt-ggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaag 153  Q
    |||||||||||||||||| ||| |||||| | ||| | |||||||||||||||||||||| | ||||| |||||||| ||||| ||||||||||| ||||    
T  12311049 tttggatttattcatgtttggagatttacgcattt-gtcgggacttggagaacatttatgattatgta-ttttgata-tcatggcatgtatgctttgaag 12311145  T
Q  154 tattttggtttatattcgctgcgactgttgag-atttgtatgcatgcatgttgactttgaattttgt 219  Q
    || | |||||||||| |||||||||||||||| |||| ||| ||||||||||| ||||| |||||||    
T  12311146 ta-tatggtttatatccgctgcgactgttgagaatttttatacatgcatgttg-ctttggattttgt 12311210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 16889906 - 16890013
Alignment:
Q  114 ttgatgtatttttgatattcatgacatgtatgctt-cgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttga 212  Q
    ||||||||||||||| || |||||||||||||||| |||| ||| | ||||||||| ||||||||||||||||| || |||||||||||||||| |||||    
T  16889906 ttgatgtatttttgacat-catgacatgtatgctttcgaattatat-ggtttatatccgctgcgactgttgagacttttatgcatgcatgttgaatttga 16890003  T
Q  213 attttgtatg 222  Q
    ||||||||||    
T  16890004 attttgtatg 16890013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 205
Target Start/End: Complemental strand, 21621250 - 21621108
Alignment:
Q  60 atttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtatttt 159  Q
    ||||||||||||||||  ||||||| || ||  ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| || | |||||||     
T  21621250 atttattcatgttggaggtttacccattgtg--gggacttggagaacatt-atgttgatgtacttttgatat-catgacatgtatgttttggagtattt- 21621156  T
Q  160 ggtttat--attcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    |||||||  || |||||||||||| ||||||| ||| |||||||||||    
T  21621155 ggtttatgtatccgctgcgactgtcgagatttttatacatgcatgttg 21621108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 17791189 - 17791367
Alignment:
Q  46 atttatctgtttggatt---tattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgt 142  Q
    |||||||||||||||||   ||||||||||||| |||||||| || |   |||| |||| ||  |||||||||||||||||||||| || ||||||||||    
T  17791189 atttatctgtttggattatttattcatgttggagatttacccattatt--gggatttggtgactatttatgttgatgtatttttgacat-catgacatgt 17791285  T
Q  143 atgcttc-gaagtattttggtttatat----tc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    ||||||  ||| ||| | |||||||||    || ||||||||||||||||||| |||||||||||||||  || |||||||||    
T  17791286 atgcttttgaattatat-ggtttatatataatctgctgcgactgttgagatttatatgcatgcatgttgttttggaattttgt 17791367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 204
Target Start/End: Original strand, 17085593 - 17085740
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtattt-ttgatattcatgacatgtatgcttcgaag 153  Q
    ||||| ||||||||||||||| |||||||| ||| | || |||||||||||| |||||||||| |||| | ||||   |||||||||||||  || ||||    
T  17085593 tttggttttattcatgttggatatttacccattt-gtcgagacttggagaac-tttatgttgaagtatctgttgaatatcatgacatgtataatttgaag 17085690  T
Q  154 tattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgtt 204  Q
    ||| | | ||| ||| |||||||||||||||||||| ||| ||||||||||    
T  17085691 tatat-gatttgtatccgctgcgactgttgagatttttatacatgcatgtt 17085740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 33540277 - 33540352
Alignment:
Q  55 tttggatttattcatgtt-ggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatat 131  Q
    |||||||||||||||||| ||| ||||||||  || | ||||||||||||||| ||||||||||||||||||||||||    
T  33540277 tttggatttattcatgtttggagatttacccaatt-gtcgggacttggagaac-tttatgttgatgtatttttgatat 33540352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 18396891 - 18396832
Alignment:
Q  160 ggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    ||||||||||| ||||||||| ||||||||| |||||||| ||||||| |||||||||||    
T  18396891 ggtttatattccgctgcgactattgagatttatatgcatgtatgttgagtttgaattttg 18396832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 22846258 - 22846104
Alignment:
Q  48 ttatctgtttggattt-attcatgtt-ggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatg 145  Q
    |||||||||||||||| ||||||||| ||| |||||||| ||| | || ||||| |||||| |||||| |  |||||||| | ||| |||||||||||||    
T  22846258 ttatctgtttggattttattcatgtttggagatttacccattt-gtcgagactttgagaacttttatgatattgtatttt-gttat-catgacatgtatg 22846162  T
Q  146 cttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    ||| || |||| | ||||||||| |||||||||| |||||| || ||| |||||||||||    
T  22846161 ctt-gatgtatat-ggtttatatccgctgcgactattgagaattttatacatgcatgttg 22846104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 15080952 - 15081061
Alignment:
Q  110 tatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgac-tgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| |||  |||||||| |||||||||| |||||| | |||||||||| |||||||||  ||||| | || | ||||||||| |||  |    
T  15080952 tatgttgatgtattattg--attcatgatatgtatgctt-gaagtactctggtttatatccgctgcgacaggttga-aattatttgcatgcatattggat 15081047  T
Q  209 ttgaattttgtatg 222  Q
    ||||||||||||||    
T  15081048 ttgaattttgtatg 15081061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 12020091 - 12019889
Alignment:
Q  17 tgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgtt 115  Q
    ||||||||||||||||| ||||||||||| ||| || ||||| ||||||||||||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  12020091 tgatctaggcgtctgtttatgttggtctagatt-atatgtttcgatttattcatgttggagatttacca-ttttgtcgggacttggagaacatttatgtt 12019994  T
Q  116 gatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaatt 215  Q
    ||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  12019993 gatgtatttgtgatat-catgacatgtatgcttcgaagtattt-ggtttatattcgctgcgactattgagatttttatgcatgcatgttgaatttgaatt 12019896  T
Q  216 ttgtatg 222  Q
    |||||||    
T  12019895 ttgtatg 12019889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 17202810 - 17202604
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    ||||||||||| ||||||||| ||||||||||| ||  |||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||    
T  17202810 gctctgatctaagcgtctgtttatgttggtctagata-atctgtttggatttattcatgttggagatttaccc-ttttgtcgagacttggagaacattta 17202713  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttat-attcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||| || | |||||||||||||||||| |||||||||||||||| |||    
T  17202712 tgttgatgtatttgtgata-tcatgacatgtatgcttcgaagta-tttggtttataatccactgcgactgttgagattt-tatgcatgcatgttgaattt 17202616  T
Q  211 gaattttgtatg 222  Q
    ||||||||||||    
T  17202615 gaattttgtatg 17202604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 25769387 - 25769182
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaa-cattta 111  Q
    |||||||||||||||||||| |||| |||||| ||| || ||||||||||||||||||||||| ||| |||| || |   |||| |||||||  ||| ||    
T  25769387 gctctgatctaggcgtctgt-atgtcggtctagatt-atatgtttggatttattcatgttggagattcacccattgtt--gggatttggagattcatcta 25769292  T
Q  112 tgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    |||||||||||| ||||||  |||||||||||||||||| ||||||| || ||||||| ||||||||||||||| |||| |||||||||||||||| |||    
T  25769291 tgttgatgtattatttgat--tcatgacatgtatgcttcaaagtattctgatttatatccgctgcgactgttgaaatttttatgcatgcatgttgagttt 25769194  T
Q  211 gaattttgtatg 222  Q
    ||||||||||||    
T  25769193 gaattttgtatg 25769182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 15874362 - 15874159
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttat 112  Q
    ||||||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||||| ||||||||   |||  ||||||||| | ||||||||    
T  15874362 gctctgatctaggcgtcggttatgttggtctaga-ttatctgttt-gatttattcatgttggagatttaccc---ttgttgggacttggtg-acatttat 15874269  T
Q  113 gttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||  |   || ||||| || ||||||| ||||||||| |||||||||||||||| ||||    
T  15874268 gttgatgtatttttgata-tcatgtcatgtatgctttgaagtaaatgatttatatatccgttgcgactattgagatttttatgcatgcatgttgaatttg 15874170  T
Q  212 aattttgtatg 222  Q
    |||||||||||    
T  15874169 aattttgtatg 15874159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 11330976 - 11331183
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggattt-attcatgttggaaatttaccccttttgccgggacttggagaa-cattt 110  Q
    ||||||||||||||||||||||  ||   ||| |||||||||||||||||| |||||||||||| |||||||| || |   |||| |||||||  ||| |    
T  11330976 gctctgatctaggcgtctgttagatttc-ctagatttatctgtttggattttattcatgttggagatttacccgttgtt--gggatttggagattcatct 11331072  T
Q  111 atgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactt 209  Q
    ||||||||||||| ||||||  ||||||||||||||| |||||| ||| ||||||||||  ||||||||||||||||||| |||||||||||||||| ||    
T  11331073 atgttgatgtattatttgat--tcatgacatgtatgcctcgaagcattctggtttatatctgctgcgactgttgagatttatatgcatgcatgttgaatt 11331170  T
Q  210 tgaattttgtatg 222  Q
    |||||||||||||    
T  11331171 tgaattttgtatg 11331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 14061257 - 14061464
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaa-cattt 110  Q
    |||||||||||||| |||||| || | |||||| ||| |  ||||||||||||||||||||||| |||||||| || |   |||| |||||||  ||| |    
T  14061257 gctctgatctaggcatctgttgatatcggtctagatt-acatgtttggatttattcatgttggagatttacccgttgtt--gggatttggagattcatct 14061353  T
Q  111 atgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactt 209  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||| |||||||||||||| | ||    
T  14061354 atgttgatgtattatttggt--tcatgacatgtatgcttcgaagttttatggtttatatccgctgcgactgttgagatttttatgcatgcatgttaaatt 14061451  T
Q  210 tgaattttgtatg 222  Q
    |||||||||||||    
T  14061452 tgaattttgtatg 14061464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 34558004 - 34557850
Alignment:
Q  48 ttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgct 147  Q
    |||| ||||||||||||||||||||||| |||||||| ||| | |||||||| |||||| ||||||||||||||||||||| | ||||| ||||||||||    
T  34558004 ttatttgtttggatttattcatgttggagatttacccattt-gtcgggactttgagaacttttatgttgatgtatttttgaca-tcatggcatgtatgct 34557907  T
Q  148 tcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    | |||||| | ||||||||||  | ||||||||||||||||| ||| |||||||||||    
T  34557906 ttgaagta-tatggtttatatctgttgcgactgttgagatttttatacatgcatgttg 34557850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 55443891 - 55444098
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatt---tattcatgttggaaatttaccccttttgccgggacttggagaa-cat 108  Q
    ||||||||||||||||||||| ||||| |||| ||| || ||||||||||   ||||||||||||| |||||||| || |   |||| |||||||  |||    
T  55443891 gctctgatctaggcgtctgtt-tgttg-tctagatt-atttgtttggattatttattcatgttggagatttacccattgtt--gggatttggagattcat 55443985  T
Q  109 ttatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgac 207  Q
     |||||||||||||| ||||||  ||||||||||||||||| |||||||| |||||||||| ||||| |||||||||||||| ||| | |||||| |||     
T  55443986 ctatgttgatgtattatttgat--tcatgacatgtatgctttgaagtattctggtttatatccgctgtgactgttgagatttttatacgtgcatgatgaa 55444083  T
Q  208 tttgaattttgtatg 222  Q
    |||||||||||||||    
T  55444084 tttgaattttgtatg 55444098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 12490918 - 12491014
Alignment:
Q  106 catttatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgt 203  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  12490918 catttatgttgatgtattatttgat--tcatgacatgtatgcttcgatgtattctggtttatatccgctgcgactgttgagatttttatgcatgcatgt 12491014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 60 - 203
Target Start/End: Complemental strand, 48419767 - 48419626
Alignment:
Q  60 atttattcatgttggaaatttaccccttttgccgggacttggagaa-catttatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtatt 157  Q
    |||||||||||||||| |||||||| || |   |||| |||||||  |||| ||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  48419767 atttattcatgttggagatttacccattgtt--gggagttggagattcattcatgttgatgtattatttgat--tcatgacatgtatgcttcgaagtatt 48419672  T
Q  158 ttggtttatattcgctgcgactgttgagatttgtatgcatgcatgt 203  Q
     ||||||||||  ||||||||||||||||||| |||||||||||||    
T  48419671 ctggtttatatcagctgcgactgttgagatttttatgcatgcatgt 48419626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 14287060 - 14286975
Alignment:
Q  134 atgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  14287060 atgacatgtatgcctcgaagtattctggtttatattccgctgcgactgttgagatttatatgcatgcatgttgagtttgaattttg 14286975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 39654015 - 39653816
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggaga-acattt 110  Q
    |||||||| |||||||||||| ||||||||||| ||| || ||||||||||||||||||||||| ||||||||   |||  |||| || ||||   || |    
T  39654015 gctctgatgtaggcgtctgtttatgttggtctagatt-atatgtttggatttattcatgttggagatttaccc--attgttgggatttagagatttatct 39653919  T
Q  111 atgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    ||||||||||||| ||||  || ||||||||||||||||||||||   | | || ||||| |||||||||||||||||||| |||||||||||||||| |    
T  39653918 atgttgatgtattatttg--atccatgacatgtatgcttcgaagtgaatggtttatatatccgctgcgactgttgagatttttatgcatgcatgttgaat 39653821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 222
Target Start/End: Complemental strand, 15515745 - 15515571
Alignment:
Q  48 ttatctgtttggattt-attcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgc 146  Q
    |||||||||||||||| ||||||||| |||  || ||| ||||| ||||||||||||||| || ||| |  ||||||||||||| ||||| |||||||||    
T  15515745 ttatctgtttggattttattcatgtttgaagatttcccattttgtcgggacttggagaactttcatgattgtgtatttttgata-tcatggcatgtatgc 15515647  T
Q  147 ttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    || ||| ||  | | || |||||  ||||||||||||||||||| |||||| ||||||||| ||||||| |||||||    
T  15515646 tt-gaattacatggtttatatatatgctgcgactgttgagatttttatgcaagcatgttgaatttgaatattgtatg 15515571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 205
Target Start/End: Original strand, 33371409 - 33371557
Alignment:
Q  55 tttggatttattcatgtt-ggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaag 153  Q
    |||||||||||||||||| ||| |||||||  ||| | ||||||||| ||||| |||||| | ||||||||| ||||| ||||||| |||||||| ||||    
T  33371409 tttggatttattcatgtttggagatttaccaattt-gtcgggacttgaagaacttttatgattatgtatttt-gatat-catgacaggtatgctttgaag 33371505  T
Q  154 tattttggtttatattcgctgcgactgttgag-atttgtatgcatgcatgttg 205  Q
    ||| | ||||||||| |||||||||||||||| |||| ||| |||||||||||    
T  33371506 tatat-ggtttatatccgctgcgactgttgagaatttttatacatgcatgttg 33371557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 11063274 - 11063338
Alignment:
Q  159 tggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  11063274 tggtttatattctgctgcgactgttgagatttatatgcatgcatgttgaatttgaatttggtatg 11063338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 12563640 - 12563749
Alignment:
Q  110 tatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactt 209  Q
    |||||||||||||| |||||  |||||| ||| | |||| |||||| | || ||||||| ||||||||||||||| |||| ||||||||||| |||  ||    
T  12563640 tatgttgatgtattattgat--tcatgatatgcacgctt-gaagtactctgatttatatccgctgcgactgttgaaatttatatgcatgcattttggatt 12563736  T
Q  210 tgaattttgtatg 222  Q
    |||||||||||||    
T  12563737 tgaattttgtatg 12563749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 17537203 - 17537263
Alignment:
Q  159 tggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  17537203 tggtttatattccgctgcgattgttgagatttatatgcatgcatgttgagtttgaattttg 17537263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 30204408 - 30204348
Alignment:
Q  159 tggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||||    
T  30204408 tggtttatattccgctgcgactgttgaaatttatatgcatgcatgttgagtttgaattttg 30204348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 11199708 - 11199766
Alignment:
Q  161 gtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||| | ||||||||||||||||| |||||||||||||||| |||||||||||    
T  11199708 gtttatattccgttgcgactgttgagatttatatgcatgcatgttgagtttgaattttg 11199766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 6230805 - 6230852
Alignment:
Q  159 tggtttatattcgctgcgactgttga-gatttgtatgcatgcatgttg 205  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  6230805 tggtttatattcgctgcgactgttgaggatttttatacatgcatgttg 6230852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 40937664 - 40937601
Alignment:
Q  159 tggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtat 221  Q
    |||||||||||| ||||||||||||||||||| ||||||||| | |||  || |||||||||||    
T  40937664 tggtttatattccgctgcgactgttgagatttatatgcatgcttattggtttcgaattttgtat 40937601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 18009265 - 18009321
Alignment:
Q  164 tatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||| |||||||||||||||    
T  18009265 tatatccgctgcgactgttgagattt-tatacatgcatg-tgaatttgaattttgtatg 18009321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 4e-65; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 17021723 - 17021523
Alignment:
Q  17 tgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgtt 115  Q
    |||||||| |||||||| ||||||||||| ||| ||||||| |||||||||||||||||| |||||||| ||||| || |||||||||||||||||||||    
T  17021723 tgatctagacgtctgtttatgttggtctagatt-atctgtt-ggatttattcatgttggagatttaccc-ttttgtcgagacttggagaacatttatgtt 17021627  T
Q  116 gatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaatt 215  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||    
T  17021626 gatgtatttttgatat-catgacatgtatgcttcgaagtattt-ggtttatatacgctgcgactgttgagatttttatgcatgcatgttgaatttgaatt 17021529  T
Q  216 ttgtat 221  Q
    ||||||    
T  17021528 ttgtat 17021523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 17607062 - 17606894
Alignment:
Q  48 ttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgct 147  Q
    ||||||||||||| |||||||||||||| | |||||| ||| | ||||||||||||||| || ||||||||||||| ||||||| |||| ||||||||||    
T  17607062 ttatctgtttggacttattcatgttggagaattacccattt-gtcgggacttggagaactttcatgttgatgtattcttgatat-catggcatgtatgct 17606965  T
Q  148 tcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    | ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  17606964 ttgaagtattt-ggtttatattcgctgcgactgttgagatttctatgcatgcatgttgaatttgaattttgt 17606894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 37235959 - 37236150
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    |||||||| |||||||||||| |||||||||||  || ||||||| ||||||||||||||||||  ||||||| ||| | ||||||||||||||||||||    
T  37235959 gctctgatataggcgtctgtttatgttggtctaggtt-atctgttcggatttattcatgttggaggtttacccattt-gtcgggacttggagaacattta 37236056  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    ||||||||||||||||||| |||||||||||||| || ||||||| | | || ||||| |||||||||||||||||||| ||| |||||||||||    
T  37236057 tgttgatgtatttttgata-tcatgacatgtatgttttgaagtatatggcttatatatccgctgcgactgttgagatttttatacatgcatgttg 37236150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 22837644 - 22837800
Alignment:
Q  48 ttatctgtttggattt-attcatgtt-ggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatg 145  Q
    |||||| ||||||||| ||||||||| ||| |||  |||| |||| ||||||||||||||| || ||| | ||||||||||||||| |||| ||||||||    
T  22837644 ttatctatttggattttattcatgtttggagatt--ccccatttgtcgggacttggagaactttcatgattatgtatttttgatat-catggcatgtatg 22837740  T
Q  146 cttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
     |||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||    
T  22837741 tttcgaagtattttggtttatatccgctgcgactgttgagatttttatacatgcatgttg 22837800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 27672959 - 27672752
Alignment:
Q  14 ctctgatctaggcgtctgtt-atgttggtctaaatttatc-tgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    ||||||||||||| |||||| ||||||||||| |||| |  |||||| |||||||||||||||| ||||||||  ||||  || ||| || |||||||||    
T  27672959 ctctgatctaggcatctgtttatgttggtctagatttcttgtgtttgaatttattcatgttggagatttaccc--tttgttggaactcggtgaacattta 27672862  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    || |||||||||||| |||| |||| ||||||| |||||| |||| | | || ||||| |||||||| ||||||||| | |||||||||||||||| |||    
T  27672861 tgctgatgtattttttatat-catgtcatgtatacttcgatgtatatggtttatatatccgctgcgaatgttgagatct-tatgcatgcatgttgaattt 27672764  T
Q  211 gaattttgtatg 222  Q
    ||||||||||||    
T  27672763 gaattttgtatg 27672752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 36358431 - 36358515
Alignment:
Q  138 catgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||||||||||| | ||||| |||||||||| ||||  |||||||||||||| |||||||||||||||| |||||||||||||||    
T  36358431 catgtatgcttcaaggtattatggtttatatccgctatgactgttgagatttttatgcatgcatgttgaatttgaattttgtatg 36358515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 21193290 - 21193126
Alignment:
Q  55 tttggatttattcatgttggaa-atttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaag 153  Q
    |||||||| ||||||||| ||| |||||||| ||| | |||||||| |||||| |||||| | ||||||||| ||||| |||  ||||||||||| ||||    
T  21193290 tttggattgattcatgtttgaagatttacccattt-gtcgggacttagagaacttttatgattatgtatttt-gatat-catagcatgtatgctttgaag 21193194  T
Q  154 tattttggtttatattcgctgcgactgttgag-atttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    ||| | ||||||||| |||||||||||||||| |||| ||| |||||||||||  |||||||||||||||    
T  21193193 tatat-ggtttatatccgctgcgactgttgagaatttttatacatgcatgttg-ttttgaattttgtatg 21193126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 51658403 - 51658541
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggaga-acattta 111  Q
    ||||||||||||||||||||||  ||   ||| ||||||||||||||||||||| |||||||| ||||||||   |||  |||| |||||||  ||| ||    
T  51658403 gctctgatctaggcgtctgttagatttc-ctagatttatctgtttggatttatttatgttggagatttaccc---ttgttgggatttggagattcatcta 51658498  T
Q  112 tgttgatgtatt-tttgatattcatgacatgta-tgcttcgaagt 154  Q
    |||||||||||| ||||  |||||||||||||| |||||||||||    
T  51658499 tgttgatgtattatttg--attcatgacatgtattgcttcgaagt 51658541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 19601215 - 19601158
Alignment:
Q  164 tatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    ||||| |||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  19601215 tatatccgctgcgactgttgagattt-tatgcatgcatgttgatttggaattttgtatg 19601158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 38035715 - 38035764
Alignment:
Q  171 gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||||||||||||||||||  ||||||||||||||| |||| ||||||||||    
T  38035715 gctgcgactgttgagattt--atgcatgcatgttgaatttggattttgtatg 38035764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 51658543 - 51658582
Alignment:
Q  179 tgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  51658543 tgttgagatttttatgcatgcatgttgaatttgaattttg 51658582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 19601367 - 19601248
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggattt-attcatgtt-ggaaatttaccccttttgccgggacttggagaacattt 110  Q
    ||||||||||||| ||||||||  ||   ||| |||||||||||||||||| | |||| || ||| |||| ||| ||||| ||||||||||||||| ||     
T  19601367 gctctgatctaggtgtctgttagattttcctagatttatctgtttggattttactcatatttggagattt-cccattttgtcgggacttggagaactttc 19601269  T
Q  111 atgttgatgtatttttgatat 131  Q
    ||| | ||||| |||||||||    
T  19601268 atgattatgtacttttgatat 19601248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 22148521 - 22148592
Alignment:
Q  132 tcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgtt 204  Q
    ||||| |||||||| || ||||| || || ||| ||| |||||||||||||||||||| ||| ||||||||||    
T  22148521 tcatggcatgtatgatttgaagt-ttatgatttgtatccgctgcgactgttgagatttttatacatgcatgtt 22148592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 33649 - 33442
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    |||||||||||  |||||||| |||||| |||| |||| ||| |||||||||||||| | |||| ||||||||| |||| ||||||||||||||||||||    
T  33649 gctctgatctatacgtctgtttatgttgatctagatttttctttttggatttattcacgatggagatttaccccctttgtcgggacttggagaacattta 33550  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||| |||||||||||||||||||| ||  |||||||||||| ||||    
T  33549 tgttgatgtatttttgata-tcatggcatgtatggttcgaagtatcttggtttatatccgctgcgactgttgagattttta--catgcatgttgaatttg 33453  T
Q  212 aattttgtatg 222  Q
    |||||||||||    
T  33452 aattttgtatg 33442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 17230108 - 17230316
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    ||||| ||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||    
T  17230108 gctctaatctaggcgtctgtttatgttggtctagatt-atctatttggatttattcatgttggagtttttccc-ttttgccgggacttggagaacattta 17230205  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    ||||||||||||||| |||| ||||||||||||  |||||||||||| | || |||||||||||||||||||||||||| |||||||||||| ||| |||    
T  17230206 tgttgatgtattttttatat-catgacatgtatcgttcgaagtatttggtttatatattcgctgcgactgttgagatttttatgcatgcatgatgaattt 17230304  T
Q  211 gaattttgtatg 222  Q
    ||||||||||||    
T  17230305 gaattttgtatg 17230316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 5617628 - 5617424
Alignment:
Q  13 gctctgatctaggcgtctg-ttatgttggtctaaatttatctg-tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    ||||||||||||| ||||| ||| |||  |||| | ||||||| ||||||||||||||||||||| ||||| ||| |||| ||||||||||||||| |||    
T  5617628 gctctgatctaggtgtctgtttacgttcatctaga-ttatctgttttggatttattcatgttggagattta-cccatttgtcgggacttggagaactttt 5617531  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| || ||||||||||||||||| |||||||||||||||| |||    
T  5617530 atgttgatgtatttttgata-tcatgacatgtatgcttcgaagta-tttggtttatatccgttgcgactgttgagatttttatgcatgcatgttgaattt 5617433  T
Q  211 gaattttgt 219  Q
    |||||||||    
T  5617432 gaattttgt 5617424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 16929964 - 16930168
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttgga-tttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    ||||| ||||||||||||||| |||||  |||| ||| |||||||| || ||||||||||||||| |||||||| |||| | |||||||||||||| |||    
T  16929964 gctctaatctaggcgtctgtttatgtttatctagatt-atctgttttgaatttattcatgttggagatttacccatttttc-gggacttggagaactttt 16930061  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||||| ||||||||||||||||| || |||||||||||| ||| |||    
T  16930062 atgttgatgtatttttgatat-catggcatgtatgctttgaagtatat-ggtttatatacgctgcgactgttgagagttttatgcatgcatgatgaattt 16930159  T
Q  211 gaattttgt 219  Q
    |||||||||    
T  16930160 gaattttgt 16930168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 16935347 - 16935551
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttgga-tttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    ||||| ||||||||||||||| |||||  |||| ||| |||||||| || ||||||||||||||| |||||||| |||| | |||||||||||||| |||    
T  16935347 gctctaatctaggcgtctgtttatgtttatctagatt-atctgttttgaatttattcatgttggagatttacccatttttc-gggacttggagaactttt 16935444  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||||| ||||||||||||||||| || |||||||||||| ||| |||    
T  16935445 atgttgatgtatttttgatat-catggcatgtatgctttgaagtatat-ggtttatatacgctgcgactgttgagagttttatgcatgcatgatgaattt 16935542  T
Q  211 gaattttgt 219  Q
    |||||||||    
T  16935543 gaattttgt 16935551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 9609380 - 9609212
Alignment:
Q  48 ttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgct 147  Q
    |||||||||||||||||||||||||||| ||||||||  || | ||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||    
T  9609380 ttatctgtttggatttattcatgttggagatttacccactt-gtcgggacttggagaacttttatgttgatgtattttttatat-catggcatgtatgct 9609283  T
Q  148 tcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    | ||||||| | ||||||||| |||||||||||||||||| | ||| |||||||||||| |||| |||||||    
T  9609282 ttgaagtatat-ggtttatatccgctgcgactgttgagatatttatacatgcatgttgaatttggattttgt 9609212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 9836952 - 9836784
Alignment:
Q  48 ttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgct 147  Q
    |||||||||||||||||||||||||||| ||||||||  || | ||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||    
T  9836952 ttatctgtttggatttattcatgttggagatttacccactt-gtcgggacttggagaacttttatgttgatgtattttttatat-catggcatgtatgct 9836855  T
Q  148 tcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    | ||||||| | ||||||||| |||||||||||||||||| | ||| |||||||||||| |||| |||||||    
T  9836854 ttgaagtatat-ggtttatatccgctgcgactgttgagatatttatacatgcatgttgaatttggattttgt 9836784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 55 - 205
Target Start/End: Complemental strand, 48345716 - 48345569
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    ||||||||||||||||||||| |||||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||| |||||    
T  48345716 tttggatttattcatgttggagatttacccattt-gtcgggacttggagaacttttaagttgatgtatttttgatat-catgacatgtatgctttgaagt 48345619  T
Q  155 attttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    || | ||||||||| |||||||||||||||||||| ||| |||||||||||    
T  48345618 atat-ggtttatatccgctgcgactgttgagatttttatacatgcatgttg 48345569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 10862994 - 10863128
Alignment:
Q  87 tttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgaga 186  Q
    |||| |||||||||||| |  || ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  10862994 tttgtcgggacttggaggattttcatgattatgtatttttgatat-catggcatgtatgcttcgaagtattttggtttatatccgctgcaactgttgaga 10863092  T
Q  187 tttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    ||| |||||||||||||||| || ||||||||||||    
T  10863093 tttttatgcatgcatgttgaattggaattttgtatg 10863128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 34243186 - 34243345
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    ||||||||||||||||||||| |||||||| ||| | |||||||||||||||  ||||||||||||||||||||||| |||| ||||| | ||| |||||    
T  34243186 tttggatttattcatgttggagatttacccattt-gtcgggacttggagaac--ttatgttgatgtatttttgatat-catggcatgtgtactttgaagt 34243281  T
Q  155 attttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    || | |||||||||  ||||||||||||||||||| ||| |||||||||||| |||| |||||||    
T  34243282 atat-ggtttatatctgctgcgactgttgagatttttatacatgcatgttgaatttggattttgt 34243345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 13375858 - 13375654
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttat 112  Q
    |||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||   |||   |||||||| | | ||||||    
T  13375858 gctctgatctaggcatctgttatgttggtctagatt-atttgtttggatttattcatgttggagatttaccc---ttgttaggacttggtg-atatttat 13375764  T
Q  113 gttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||  | | || ||||| ||||||||||||    |||| | |||||||||||||| ||||    
T  13375763 gttgatgtttttttgata-tcatgtcatgtatgcttcgaagtaaatggtttatatatacgctgcgactgtatctatttttttgcatgcatgttgaatttg 13375665  T
Q  212 aattttgtatg 222  Q
    |||||||||||    
T  13375664 aattttgtatg 13375654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 205
Target Start/End: Original strand, 14278949 - 14279095
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    ||||||||||||||||||||| |||||||| ||| | ||||||||||||||| ||||||||||||||||||| |||| |||| |||||||| || |||||    
T  14278949 tttggatttattcatgttggagatttacccattt-gtcgggacttggagaac-tttatgttgatgtattttttatat-catggcatgtatggtttgaagt 14279045  T
Q  155 attttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    || | ||||||||| |||||||||||||||||||| | | |||||||||||    
T  14279046 atat-ggtttatatccgctgcgactgttgagatttttgtacatgcatgttg 14279095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 16915822 - 16915630
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    |||||||||||||||| |||| |||| |||||| ||| || |||||||||||| ||||||||||  ||||||| |||  | |||||||||||||||||||    
T  16915822 gctctgatctaggcgtttgtttatgtcggtctagatt-atttgtttggatttactcatgttggaggtttacccatttatc-gggacttggagaacattta 16915725  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgag-atttgtatgcatgcatgttg 205  Q
    ||||||||||||||| ||| ||||| |||||||| || ||||||| | | || ||||| ||||||||||||||||  ||| ||| |||||||||||    
T  16915724 tgttgatgtattttttata-tcatggcatgtatgttttgaagtatatggtttatatatccgctgcgactgttgagtttttttatacatgcatgttg 16915630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 222
Target Start/End: Complemental strand, 13388113 - 13387955
Alignment:
Q  60 atttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtatttt 159  Q
    |||||||||||||||| |||||||   ||||  ||||||||  ||||||||||||||  ||||||||||||| |||| ||||||||||||||||||| |     
T  13388113 atttattcatgttggagatttaccg--tttgttgggacttgatgaacatttatgttg--gtatttttgatat-catgtcatgtatgcttcgaagtatatg 13388019  T
Q  160 ggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    | || ||||| |||||||| ||||||||||| |||||||||||| ||| |||  ||||||||||    
T  13388018 gtttatatatccgctgcgaatgttgagatttttatgcatgcatgatgaattttgattttgtatg 13387955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 218
Target Start/End: Complemental strand, 13272987 - 13272878
Alignment:
Q  109 ttatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgac 207  Q
    ||||| ||||||||| |||||| || ||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||| |||| |||||||||||     
T  13272987 ttatgatgatgtattatttgatttttatgacatgtatgctt-gaagtattctggtttatatccgctgcgactgttaagatttatatgtatgcatgttgaa 13272889  T
Q  208 tttgaattttg 218  Q
    |||| ||||||    
T  13272888 tttgtattttg 13272878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 15914417 - 15914547
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttat 112  Q
    ||||||||||||| ||||||||  ||   ||| ||||||||||||||||||||||||||||||  ||||||| || |   || ||||||||| |||||||    
T  15914417 gctctgatctaggtgtctgttagatttc-ctagatttatctgtttggatttattcatgttggaggtttacccattatt--ggaacttggagatcatttat 15914513  T
Q  113 gttgatgtatttttgatattcatgacatgtatgct 147  Q
    |||||||||||||||||| ||||| ||||||||||    
T  15914514 gttgatgtatttttgata-tcatggcatgtatgct 15914547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 222
Target Start/End: Original strand, 9058655 - 9058828
Alignment:
Q  48 ttatctgtttggatttattcatgtt-ggaaatttaccccttttgccgggacttgg-agaacattt-atgttgatgtatttttgatattcatgacatgtat 144  Q
    |||||||||||||||| |||||||| ||| |||||||| ||| | |||||||||| ||||  ||| ||||| ||||||||||||||| |||| |||||||    
T  9058655 ttatctgtttggattttttcatgtttggatatttacccattt-gtcgggacttgggagaattttttatgtttatgtatttttgatat-catggcatgtat 9058752  T
Q  145 gcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    | || ||||||| | ||||||||| || |||||||||||||| || ||| |||||||||||  |||| ||||||||||    
T  9058753 gttttgaagtatat-ggtttatatccgatgcgactgttgagaattttatacatgcatgttg-ttttggattttgtatg 9058828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 16651365 - 16651422
Alignment:
Q  162 tttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  16651365 tttatatccgctgcgactgttgagatttttatgcatgcatgttgaatttgaattttgt 16651422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 17625725 - 17625782
Alignment:
Q  162 tttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  17625725 tttatatccgctgcgactgttgagatttttatgcatgcatgttgaatttgaattttgt 17625782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 16574652 - 16574714
Alignment:
Q  159 tggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtat 221  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||    
T  16574652 tggtttatatccgctgcgattgttgagatttatatgcatgcatgttgagtttggattttgtat 16574714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 16591010 - 16590948
Alignment:
Q  159 tggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtat 221  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||    
T  16591010 tggtttatatccgctgcgattgttgagatttatatgcatgcatgttgagtttggattttgtat 16590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 11285078 - 11284990
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||||||  || || ||| | |||||||||||| |||| |||||||||||||| |||||||||||||||| |||||||||||    
T  11285078 attcatgacatgtatatttgga-gtactctggtttatattccgctgtgactgttgagatttatatgcatgcatgttgagtttgaattttg 11284990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 13845150 - 13845238
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||||||  ||  ||||| ||||||| |||||| ||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  13845150 attcatgacatgtatatttt-aagtactttggttcatattccgctgcgactgttgagatttatatgcatgtatgttgaatttgaattttg 13845238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 49049870 - 49050079
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggattt--attcatgttggaaatttaccccttttgccgggacttggagaa-catt 109  Q
    ||||||||||||| ||||||||  ||   ||| ||||||||||||||||||  |||||||||||| ||||||  | || |  |||| |||||||  |||     
T  49049870 gctctgatctaggtgtctgttagatttc-ctagatttatctgtttggatttttattcatgttggagatttacttcatt-gttgggatttggagattcatc 49049967  T
Q  110 tatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| |||| |  |||| | |||||||| |  ||| ||| || ||||||| ||||||||||||||| |||| ||||||| |||||| | |    
T  49049968 tatgttgatgtattatttggt--tcataatatgtatgccttaaagaattctgatttatatccgctgcgactgttgatatttttatgcattcatgttaaat 49050065  T
Q  209 ttgaattttgtatg 222  Q
    ||||||||||||||    
T  49050066 ttgaattttgtatg 49050079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 12250203 - 12250291
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttga-ctttgaattttg 218  Q
    |||||||||||||||  || || ||| | |||||||||| |||||||||||||||||||| |||||||| |||||||  |||||||||||    
T  12250203 attcatgacatgtatatttgga-gtactctggtttatatccgctgcgactgttgagatttatatgcatggatgttgagttttgaattttg 12250291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 18306096 - 18306184
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||||||  || || ||| | |||||||||||| ||||||||| ||||||||| ||||||||| |||||| |||||||||||    
T  18306096 attcatgacatgtatattttga-gtactctggtttatattccgctgcgactattgagatttatatgcatgcttgttgagtttgaattttg 18306184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 15628731 - 15628673
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagattt 189  Q
    |||||||||||||||| || |||||||| |||||||||| | ||||||||||||||||||    
T  15628731 attcatgacatgtatgttt-gaagtattctggtttatatcctctgcgactgttgagattt 15628673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 15953758 - 15953816
Alignment:
Q  164 tatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    ||||| |||||||||||||||||||| |||||||| |||| || || ||||||||||||    
T  15953758 tatatccgctgcgactgttgagatttttatgcatggatgtcgaattagaattttgtatg 15953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 9e-57; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 40642335 - 40642539
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    |||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||||| |||   |||||||| |||||||||||||| |||||    
T  40642335 gctctgatctaggcatctgtttatgttggtctagatt-atctgtttggatttattcatgttggagatta--cccttttgtcgggacttggagaatattta 40642431  T
Q  112 tgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||| | || ||||||| ||||    
T  40642432 tgttgatgtatttttgata-tcatgacatgtatgcttcgaagta-tttggtttatatccgctgcgactgatgagattt-tatacgtgtatgttgaatttg 40642528  T
Q  212 aattttgtatg 222  Q
    |||||||||||    
T  40642529 aattttgtatg 40642539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 222
Target Start/End: Complemental strand, 25303710 - 25303551
Alignment:
Q  61 tttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttg 160  Q
    |||||| |||||||| |||| ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  25303710 tttatttatgttggagatttgccccttt-gtcgggacttggagaacatttatgttgatgtatttttgatat-catgacatgcatgcttcgaagtattttg 25303613  T
Q  161 gtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||| ||||| |||||||||    
T  25303612 gtttatatccgctgcgaatgttgagatttttatgcatgcatgttgaatttgagttttgtatg 25303551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 32738595 - 32738434
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    |||||||||||||||||||||  ||||||| ||| | |||||||| |||||| |||||||| ||||||||||||||| |||| |||||||| || | |||    
T  32738595 tttggatttattcatgttggagttttacccattt-gtcgggactttgagaacttttatgtttatgtatttttgatat-catggcatgtatgttttggagt 32738498  T
Q  155 attttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    || | |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  32738497 atat-ggtttatattcgctgcgactgttgagatttttatgcatgcatgttgaatttgaattttgt 32738434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 19435958 - 19436112
Alignment:
Q  48 ttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgct 147  Q
    ||||||||||| |||||||||||||||| |||||||| |||  | |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |    
T  19435958 ttatctgtttgaatttattcatgttggagatttacccatttctc-gggacttggagaacatttatgttgatgtattttttata-tcatggcatgtatgtt 19436055  T
Q  148 tcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    | ||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||    
T  19436056 ttgaagtatatt-gtttatatccgctgcgactgttgagatttttatacatgcatgttg 19436112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 24089428 - 24089634
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgttt-ggatttattcatgttggaaatttaccccttttgccgggacttggagaa-cattt 110  Q
    ||||||||||||| ||||||| || |  |||||||| |||||||| |||||||||||||||||| ||| |||| || |   |||| || ||||  |||||    
T  24089428 gctctgatctaggtgtctgttttgattatctaaatt-atctgttttggatttattcatgttggagatt-acccgttgtt--gggatttagagattcattt 24089523  T
Q  111 atgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactt 209  Q
    ||||||||||||| ||||||  ||||||||||||| | |||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||    
T  24089524 atgttgatgtattatttgat--tcatgacatgtatacatcgaagtattctggtttatatccgctgcgactgttgagatttttatgcatgcatgttgaatt 24089621  T
Q  210 tgaattttgtatg 222  Q
    |||||||||||||    
T  24089622 tgaattttgtatg 24089634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 9782902 - 9783033
Alignment:
Q  12 tgctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    |||||||||||||||||||||| |||||  |||| ||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||    
T  9782902 tgctctgatctaggcgtctgtttatgtttttctagatt-atctgtttggatttattcatgttggagatttaccc-ttttgtcgggacttggaaaacattt 9782999  T
Q  111 atgttgatgtatttttgatattcatgacatgtatg 145  Q
    |||||||||||||||||||| ||||||||| ||||    
T  9783000 atgttgatgtatttttgata-tcatgacatttatg 9783033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 23823594 - 23823702
Alignment:
Q  110 tatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| ||||||  ||||||||||||||| | | |||||| |||||||||| |||||||||||||||||||| |||||||||||||||| |    
T  23823594 tatgttgatgtattatttgat--tcatgacatgtatgccttggagtattctggtttatatccgctgcgactgttgagatttttatgcatgcatgttgaat 23823691  T
Q  209 ttgaattttgt 219  Q
    |||||||||||    
T  23823692 ttgaattttgt 23823702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 23825538 - 23825646
Alignment:
Q  110 tatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| ||||||  ||||||||||||||| | | |||||| |||||||||| |||||||||||||||||||| |||||||||||||||| |    
T  23825538 tatgttgatgtattatttgat--tcatgacatgtatgccttggagtattctggtttatatccgctgcgactgttgagatttttatgcatgcatgttgaat 23825635  T
Q  209 ttgaattttgt 219  Q
    |||||||||||    
T  23825636 ttgaattttgt 23825646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 22582096 - 22582208
Alignment:
Q  110 tatgttgatgtatt-tttgatattcatgacatgtat-gcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgac 207  Q
    |||||||||||||| |||||| |  ||||||||||| ||||||||||||  |||||||||| |||||||||||||||||||| ||||||||||||||||     
T  22582096 tatgttgatgtattatttgattt--atgacatgtattgcttcgaagtatactggtttatatccgctgcgactgttgagatttttatgcatgcatgttgaa 22582193  T
Q  208 tttgaattttgtatg 222  Q
    ||||||||| |||||    
T  22582194 tttgaatttcgtatg 22582208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 7319460 - 7319375
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattt 216  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||| | |||||||||||||||| |||||||||    
T  7319460 attcatgacatgtatgcttcgaagtatta-ggtttatatccgctgcgactgttgagatctttatgcatgcatgttgaatttgaattt 7319375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 22654112 - 22653995
Alignment:
Q  106 catttatgttgatgtatttttgatattcatgacatgtat-gcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgtt 204  Q
    ||||||| |||||||||| ||   ||||||||||||||| ||||||||||||| | |||||||| |||||||  ||||||||||| ||||||||||||||    
T  22654112 catttatattgatgtattattttgattcatgacatgtattgcttcgaagtattctagtttatatccgctgcggttgttgagatttttatgcatgcatgtt 22654013  T
Q  205 gactttgaattttgtatg 222  Q
    ||   |||||||||||||    
T  22654012 gaacatgaattttgtatg 22653995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 32247 - 32452
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggattt--attcatgttggaaatttaccccttttgccgggacttggagaa-catt 109  Q
    ||||||||||||||||||||||  ||   ||||||||||||||||||||||  ||| |||||||| |||||||| || |   |||| |||||||  |||     
T  32247 gctctgatctaggcgtctgttagatttc-ctaaatttatctgtttggattttcatttatgttggagatttacccgttgtt--gggatttggagattcatc 32343  T
Q  110 tatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagattt-gtatgcatgcatgttgact 208  Q
    |||||||||||||| |||||  |||||| ||| ||| || |||| | | |||||||||| ||||||||||||||| ||||  |||||||||||||||  |    
T  32344 tatgttgatgtattattgat--tcatgatatgcatgttt-gaagcactctggtttatatccgctgcgactgttgaaatttaatatgcatgcatgttggat 32440  T
Q  209 ttgaattttgta 220  Q
    ||||||||||||    
T  32441 ttgaattttgta 32452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 187
Target Start/End: Complemental strand, 19648218 - 19648084
Alignment:
Q  50 atctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttc 149  Q
    |||||||||||||||||||||||||| ||||| ||| |||  |||||||||||| |  |||||||||||||||| |||||| ||||| |||||||  ||     
T  19648218 atctgtttggatttattcatgttggatattta-cccatttatcgggacttggag-agttttatgttgatgtattattgata-tcatggcatgtatatttt 19648122  T
Q  150 gaagtattttggtttat-attcgctgcgactgttgagat 187  Q
    |||||  | |||||||| || ||||||||||||||||||    
T  19648121 gaagt-gtatggtttataatccgctgcgactgttgagat 19648084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 28969941 - 28969853
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||||||  || ||| || | |||||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||||    
T  28969941 attcatgacatgtatatttggaa-tactctggtttatattccgctgcgactgttgaaatttatatgcatgcatgttgagtttgaattttg 28969853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 5341 - 5474
Alignment:
Q  87 tttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgag 185  Q
    |||| ||||||||||||||| || ||| | ||||||||| | ||| |||| ||||||||||| ||  ||| | | || ||||| ||||||||||||||||    
T  5341 tttgtcgggacttggagaactttcatgattatgtattttcgttat-catggcatgtatgctt-gatttatatggtttatatatccgctgcgactgttgag 5438  T
Q  186 atttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||| |||||||||||| ||| |||||||||||||||    
T  5439 atttttatgcatgcatg-tgaatttgaattttgtatg 5474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 205
Target Start/End: Complemental strand, 43640473 - 43640330
Alignment:
Q  61 tttattcatgttggaa-atttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagtatttt 159  Q
    ||||||||| || ||| |||||||| |||||  ||||||| |||||  |||||| | ||||||||| ||||| |||| ||||||||||| ||||||| |     
T  43640473 tttattcatttttgaagatttacccattttgtagggacttagagaatttttatgattatgtatttt-gatat-catggcatgtatgctttgaagtatat- 43640377  T
Q  160 ggtttatattcgctgcgactgtt-gagatttgtatgcatgcatgttg 205  Q
    ||||||||| ||||||||||||| || |||| ||| |||||||||||    
T  43640376 ggtttatatccgctgcgactgttggaaatttttatacatgcatgttg 43640330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 24573541 - 24573633
Alignment:
Q  129 tattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||| ||||||||||||| || | ||||| |||||||||| |||||||| ||||||||| | |||| |||||||||||  ||| ||||||||||    
T  24573541 tatttatgacatgtatgcctc-aggtattctggtttatatccgctgcgaatgttgagatctttatgaatgcatgttgaacttggattttgtatg 24573633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 25599862 - 25599802
Alignment:
Q  159 tggtttatattcg-ctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    ||||||||||||  |||||||||||||||||| |||||||||||| ||| |||||||||||    
T  25599862 tggtttatattccactgcgactgttgagatttatatgcatgcatgatgagtttgaattttg 25599802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 720409 - 720351
Alignment:
Q  164 tatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    ||||| ||||| |||| |||| |||| |||||||||||||||| |||||||||||||||    
T  720409 tatatccgctgtgactattgaaatttttatgcatgcatgttgaatttgaattttgtatg 720351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 17283406 - 17283200
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttat 112  Q
    ||||||||||||| |||||||||||||||||| ||| || |||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  17283406 gctctgatctaggtgtctgttatgttggtctagatt-atttgtt-ggatttattcatgttggagatttaccc-ttttgtcgggacttggagaacatttat 17283310  T
Q  113 gttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgagatttgtatgcatgcatgttgactttg 211  Q
    ||||||||||||||| | |  ||| ||||||||||||||||||| | | || ||||| |||||||||||||||||||| ||||| |||||| ||| ||||    
T  17283309 gttgatgtatttttg-tttgtatgtcatgtatgcttcgaagtatatggtttatatatccgctgcgactgttgagatttttatgcttgcatgatgaatttg 17283211  T
Q  212 aattttgtatg 222  Q
    |||||||||||    
T  17283210 aattttgtatg 17283200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 222
Target Start/End: Complemental strand, 23833438 - 23833230
Alignment:
Q  16 ctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgt 114  Q
    ||||||||||| |||||| ||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||| ||||| |||||||||||||||||    
T  23833438 ctgatctaggcatctgtttatgttggtctagatttatctgtt-ggattgattcatgttggagatttaccccttttgtcgggatttggagaacatttatgt 23833340  T
Q  115 tgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtt-tatattcgctgcgactgttgaga---tttgtatgcatgcatgttgacttt 210  Q
    ||||||| ||||| || ||||||||||||||||||||||||| | | || ||||| |||||||| ||||||||   ||| |||||||||||||||| |||    
T  23833339 tgatgta-ttttgtta-tcatgacatgtatgcttcgaagtatatggtttatatatgcgctgcgaatgttgagattttttttatgcatgcatgttgaattt 23833242  T
Q  211 gaattttgtatg 222  Q
    | ||||||||||    
T  23833241 ggattttgtatg 23833230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 22737981 - 22738180
Alignment:
Q  14 ctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaa-cattta 111  Q
    ||||||||||||||| |||| ||||||||||| |||| | ||||||||||||||||||||||| |||||||| || |         ||||||  ||| ||    
T  22737981 ctctgatctaggcgtgtgtttatgttggtctagattt-tatgtttggatttattcatgttggagatttacccattgt---------tggagattcatcta 22738070  T
Q  112 tgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    |||||||||||| ||||||  ||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||  ||    
T  22738071 tgttgatgtattatttgat--tcatgacatgtgtgcttcgaagtattctggtttatatccgctgcgactgttgagatttatatgcatgcatgttgaagtt 22738168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 21192730 - 21192936
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttgg--atttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    ||||||||||||||||||||| |||||||||| ||| || |||| |   ||||| | |||||||| |||||||| | |||   |||||||| ||||||||    
T  21192730 gctctgatctaggcgtctgtt-tgttggtctagatt-atttgttggattatttactgatgttggagatttacccttgttg---ggacttggtgaacattt 21192824  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggttt-atattcgctgcgactgttgagatttgtatgcatgcatgttgactt 209  Q
    | ||||||||||||||||||| |||| ||||||||||||||||||| | | ||| |||| |||||||| ||||| ||||| |||||||||||| ||| ||    
T  21192825 acgttgatgtatttttgatat-catgtcatgtatgcttcgaagtatatggtttttatatccgctgcgaatgttgggatttttatgcatgcatgatgaatt 21192923  T
Q  210 tgaattttgtatg 222  Q
    |||||||||||||    
T  21192924 tgaattttgtatg 21192936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 26009603 - 26009399
Alignment:
Q  13 gctctgatctaggcgtctg-ttatgttggtctaaatttatctg-tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    |||| |||||||||||||| ||||| |  |||| | ||||||| ||||||||||||||||||||| ||||| ||| |||| ||||||||||||||  |||    
T  26009603 gctcagatctaggcgtctgtttatgattatctaga-ttatctgttttggatttattcatgttggagattta-cccatttgtcgggacttggagaaatttt 26009506  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    ||||||||||| |||||||| ||||| |||||||| || |||||| | |||||||||| |||||| ||||||||| ||| ||| || ||||||||| |||    
T  26009505 atgttgatgtagttttgata-tcatggcatgtatgttttgaagta-tatggtttatatccgctgctactgttgagttttttatacacgcatgttgaattt 26009408  T
Q  211 gaattttgt 219  Q
    | |||||||    
T  26009407 ggattttgt 26009399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 5851672 - 5851499
Alignment:
Q  13 gctctgatctaggcgtctgt-tatgttggtctaaatttatctg-tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    ||||||||||||| |||||| |||| |  |||| | ||||||| ||||||||||||||||||||| ||||| ||| |||| ||| ||||||||||| |||    
T  5851672 gctctgatctaggtgtctgtatatgattatctaga-ttatctgttttggatttattcatgttggatattta-cccatttgtcggaacttggagaactttt 5851575  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagattt 189  Q
    ||||||||||| |||||||| |||||||||||||| || |||||| | |||||||||| ||||||||||||||||||||    
T  5851574 atgttgatgtacttttgata-tcatgacatgtatggtt-gaagta-tatggtttatatccgctgcgactgttgagattt 5851499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 21200156 - 21200362
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttgg--atttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    ||||||||||||||||| ||| |||||||||| ||| || |||| |   ||||| |||||||||| |||||||| | |||   |||||||| ||||||||    
T  21200156 gctctgatctaggcgtccgtt-tgttggtctagatt-atttgttggattatttactcatgttggagatttacccttgttg---ggacttggtgaacattt 21200250  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggttt-atattcgctgcgactgttgagatttgtatgcatgcatgttgactt 209  Q
    | ||||||||||||||||||| |||   |||||||||||||||||| | | ||| |||| |||||||| |||| |||||| |||||||||||| ||| ||    
T  21200251 acgttgatgtatttttgatat-catataatgtatgcttcgaagtatatggtttttatatccgctgcgaatgtttagatttttatgcatgcatgatgaatt 21200349  T
Q  210 tgaattttgtatg 222  Q
    |||||||||||||    
T  21200350 tgaattttgtatg 21200362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 38531736 - 38531528
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatt----tatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaa-ca 107  Q
    ||||||||||||| |||||||||||  ||||| |||    | | |||||||||| |||||||||||| |||||||| || |   |||| |||||||  ||    
T  38531736 gctctgatctaggtgtctgttatgtcagtctagattatcttttatgtttggatt-attcatgttggagatttacccattgtt--gggatttggagattca 38531640  T
Q  108 tttatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatg-ttg 205  Q
    | |||||||||||||| ||||||  ||||||||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||||| |||    
T  38531639 tctatgttgatgtattatttgat--tcatgacatgtatgcctcgaagtattatggtttatatccgctgcgactattgagattt-tatgcatgcatgtttg 38531543  T
Q  206 actttgaattttgta 220  Q
    | |||||||||||||    
T  38531542 aatttgaattttgta 38531528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 15931453 - 15931288
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    |||||||||||||||||||||  ||||||| ||| | ||||||| |||| || ||||||||||| || ||||||||| |||| ||||||||||| |||||    
T  15931453 tttggatttattcatgttggagttttacccattt-gtcgggactgggagtacttttatgttgatatacttttgatat-catggcatgtatgctttgaagt 15931356  T
Q  155 attttggtttatattcgctgcgactgttgag-atttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    || | ||||||||| |||||||||||||||| |||| ||| |||||||||||  || | ||||||||||    
T  15931355 atat-ggtttatatccgctgcgactgttgagaatttttatacatgcatgttgttttgggattttgtatg 15931288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 220
Target Start/End: Complemental strand, 25293605 - 25293496
Alignment:
Q  110 tatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| ||||||  |||||||||||||||  ||||||||| |||||||| | |||||||||||||||||||| |||||||||||| ||| |    
T  25293605 tatgttgatgtattatttgat--tcatgacatgtatgccccgaagtattctggtttatttccgctgcgactgttgagatttatatgcatgcatgatgaat 25293508  T
Q  209 ttgaattttgta 220  Q
    ||||||||||||    
T  25293507 ttgaattttgta 25293496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 220
Target Start/End: Complemental strand, 25755594 - 25755485
Alignment:
Q  110 tatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| ||||||  |||||||||||||||  ||||||||| |||||||| | |||||||||||||||||||| |||||||||||| ||| |    
T  25755594 tatgttgatgtattatttgat--tcatgacatgtatgccccgaagtattctggtttatttccgctgcgactgttgagatttatatgcatgcatgatgaat 25755497  T
Q  209 ttgaattttgta 220  Q
    ||||||||||||    
T  25755496 ttgaattttgta 25755485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 29296050 - 29295861
Alignment:
Q  13 gctctgatctaggcgtctg-ttatgttggtctaaatttatctg-tttggatttattcatgttggaa-atttaccccttttgccgggacttggagaacatt 109  Q
    ||||||||||||| ||||| ||||| |  |||| | ||||||| |||||||||||||||||| ||| |||||||| ||||| ||| ||||||||||| ||    
T  29296050 gctctgatctaggtgtctgtttatgattatctaga-ttatctgttttggatttattcatgtttgaagatttacccattttgtcggaacttggagaacttt 29295952  T
Q  110 tatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    |||| | |||||  ||||||| ||||||||||||| ||| |||||| | |||||||||| |||||||||||||||||||| ||| |||||||||||    
T  29295951 tatgattatgta--tttgata-tcatgacatgtatactttgaagta-tatggtttatatccgctgcgactgttgagattt-tatacatgcatgttg 29295861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 17731653 - 17731742
Alignment:
Q  134 atgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgaga-tttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    ||||||||||||  |||||||||| |||||||||| ||||||||||||||||| ||| ||||||| |||||||| |||||||||||||||    
T  17731653 atgacatgtatgtctcgaagtattctggtttatatccgctgcgactgttgagattttttatgcattcatgttgaatttgaattttgtatg 17731742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 21695656 - 21695547
Alignment:
Q  110 tatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactt 209  Q
    |||||||||||||| |||||  |||||| |||||||||| |||||| | |||||||||| ||| |||||||||||||||| | |||||||||||||  ||    
T  21695656 tatgttgatgtattattgat--tcatgatatgtatgctt-gaagtactctggtttatatccgccgcgactgttgagatttatctgcatgcatgttggatt 21695560  T
Q  210 tgaattttgtatg 222  Q
    |||||||||||||    
T  21695559 tgaattttgtatg 21695547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 222
Target Start/End: Original strand, 39448849 - 39449027
Alignment:
Q  47 tttatctgtttggattt-attcatgttggaaatttaccccttttgccgggacttggagaa-catttatgttgatgtatt-tttgatattcatgacatgta 143  Q
    ||||||||||||||||| |||||||||||| |||||||| || |   |||| |||||||  ||| |||||||||||||| ||||||  ||||||||| ||    
T  39448849 tttatctgtttggattttattcatgttggagatttacccgttgtt--gggatttggagattcatctatgttgatgtattatttgat--tcatgacatata 39448944  T
Q  144 tgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtat----gcatgcatgttgactttgaattttgtatg 222  Q
    ||| |||||||||| ||||||||||  ||||||||||||||||||| | |    ||||||||||||| | | |||||||||||    
T  39448945 tgcctcgaagtattctggtttatatctgctgcgactgttgagatttttttttacgcatgcatgttgaatataaattttgtatg 39449027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 23229333 - 23229467
Alignment:
Q  50 atctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttc 149  Q
    ||||||||||||||||| |||||||| | ||  ||| |||| ||||||| ||||||| ||||||||||||||||||||||| ||| | |||||||| ||     
T  23229333 atctgtttggatttatttatgttggatactt--cccatttgtcgggactaggagaac-tttatgttgatgtatttttgata-tcacggcatgtatg-ttt 23229427  T
Q  150 gaagtattttggtttat-attcgctgcgactgttgagattt 189  Q
    |||||| | |||||||| ||||| |||||||||||||||||    
T  23229428 gaagta-tatggtttataattcgttgcgactgttgagattt 23229467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 21679182 - 21679094
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||||||| || || ||| | |||||||||||| |||| |||||||||||||| ||||||||| |||||| |||||||||||    
T  21679182 attcatgacatgtatgttttga-gtactctggtttatattccgctgtgactgttgagatttatatgcatgcctgttgagtttgaattttg 21679094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 18770169 - 18770327
Alignment:
Q  46 atttatctgtttggattt-attcatg-ttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgta 143  Q
    |||||||||||||||||| ||||||| ||||| ||||  ||| |||| |||||||||||| || || ||| | |||||| |||||||| |||| ||||||    
T  18770169 atttatctgtttggattttattcatgcttggagattt--cccatttgtcgggacttggaggactttgatgattatgtatatttgatat-catggcatgta 18770265  T
Q  144 tgcttcgaagtattttggtttat--attcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    ||||| ||  ||| | | |||||  || |||||||||||||||||||| |||||||||||||||    
T  18770266 tgctt-gatttatat-gatttatgtatccgctgcgactgttgagatttatatgcatgcatgttg 18770327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 37655764 - 37655817
Alignment:
Q  132 tcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgaga 186  Q
    ||||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||    
T  37655764 tcatggcatgtatgctttgaagtatat-ggtttatatccgctgcgactgttgaga 37655817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 51484 - 51277
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgttt-ggatttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    ||||||||||||||||||||| ||||| ||||| ||| |||||||| ||||| |||||||||||| |||||||| ||| | ||||||||| ||||| |||    
T  51484 gctctgatctaggcgtctgtttatgtttgtctagatt-atctgttttggattcattcatgttggagatttacccattt-gtcgggacttgaagaactttt 51387  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||| | ||||||||| || ||||||||| ||||||| |||||||||||||||| |||    
T  51386 atgtttatgtatttttgatat-catgacatgtatgctttgaagtatat-ggtttatatccgttgcgactgtagagatttttatgcatgcatgttgaattt 51289  T
Q  211 gaattttgtatg 222  Q
    ||||||||||||    
T  51288 gaattttgtatg 51277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 29276 - 29072
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgttt-ggatttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    ||||||||||||||||||||| |||||  |||| ||| |||| ||| |||||||||||||||||| |||||||| | | | ||||||||||||||| |||    
T  29276 gctctgatctaggcgtctgtttatgtttatctagatt-atctattttggatttattcatgttggagatttacccatgt-gtcgggacttggagaactttt 29179  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    ||||||||||||||||||||| |||| ||||||| ||| ||||||| | | ||||||| |||||||||||||||||||| |||||||||||||||| |||    
T  29178 atgttgatgtatttttgatat-catggcatgtatcctttgaagtatat-gatttatatccgctgcgactgttgagatttttatgcatgcatgttgaattt 29081  T
Q  211 gaattttgt 219  Q
    |||||||||    
T  29080 gaattttgt 29072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 55 - 205
Target Start/End: Complemental strand, 11566 - 11419
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    ||||||||||||||||||||| |||||||| ||| | ||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||| ||| |||||    
T  11566 tttggatttattcatgttggagatttacccattt-gtcgggacttggagaacttttatgttgttgtattttttatat-catgtcatgtattctttgaagt 11469  T
Q  155 attttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    || | ||||||||| |||||||||||||||||||| ||| |||||||||||    
T  11468 atat-ggtttatatccgctgcgactgttgagatttttatacatgcatgttg 11419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 107762 - 107555
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaac-attt 110  Q
    ||||||| ||||||||||||| |||| ||||||  || || ||||||||||||||||||||||| |||||||| || |   |||| |||||||   || |    
T  107762 gctctgacctaggcgtctgtttatgtcggtctaggtt-atatgtttggatttattcatgttggagatttacccattgtt--gggatttggagatttatct 107666  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    ||||||||||||| ||   |||||||||||||||||  ||||||||| |||||||||| | |||||||||||||| ||| |||||||||||||||| |||    
T  107665 atgttgatgtattattcg-attcatgacatgtatgccccgaagtattatggtttatatccactgcgactgttgagctttttatgcatgcatgttgaattt 107567  T
Q  211 gaattttgtatg 222  Q
    ||||||||||||    
T  107566 gaattttgtatg 107555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 106933 - 107104
Alignment:
Q  46 atttatctgtttggattt-attcatgttggaaatttaccccttttgccgggacttggagaa-catttatgttgatgtatt-tttgatattcatgacatgt 142  Q
    |||||||||||| ||||| |||||||||||| |||||||  | |||  |||| |||||||  ||| |||||||||||||| |||| |  ||||||||| |    
T  106933 atttatctgtttagattttattcatgttggagatttacc--tgttgttgggatttggagattcatctatgttgatgtattatttggt--tcatgacattt 107028  T
Q  143 atgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    |||||||||| |||| |||||||||| | ||||||||||||||| || |||||||||||| ||| ||||||||||||    
T  107029 atgcttcgaaatattctggtttatatccactgcgactgttgaga-ttatatgcatgcatgatgaatttgaattttgt 107104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 205
Target Start/End: Original strand, 99236 - 99383
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    |||||||||||||||||| || |||||||| ||| | | ||||||||||||| |||||||||| ||| |||||||||| ||| ||||||||||| |||||    
T  99236 tttggatttattcatgttagagatttacccattt-gtcaggacttggagaacttttatgttgacgtacttttgatatt-atggcatgtatgctttgaagt 99333  T
Q  155 attttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    || | ||||||||| |||||||||||||||||||| ||| |||||||||||    
T  99334 atat-ggtttatatccgctgcgactgttgagatttttatacatgcatgttg 99383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 30035 - 29971
Alignment:
Q  159 tggtttatattcg-ctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    ||||||||||||  || ||||||||||||||| ||||||||| | |||  |||||||||||||||    
T  30035 tggtttatattcctctacgactgttgagatttatatgcatgcttattggttttgaattttgtatg 29971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 68308 - 68244
Alignment:
Q  159 tggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||||||||||| ||||||||||||||  ||| ||||| ||||| |||  |||||||||||||||    
T  68308 tggtttatattccgctgcgactgttgaagtttatatgcttgcatattggttttgaattttgtatg 68244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 66714 - 66510
Alignment:
Q  13 gctctgatctaggcgtctgtt-atgttggtctaaatttatctgt-ttggatttattcatgttggaaatttaccccttttgccgggacttggagaacattt 110  Q
    |||||||||||| |||||||| |||||  |||| ||| |||| | |||||||||||||||||||| |||||||| ||||| ||||||||| ||||| |||    
T  66714 gctctgatctagacgtctgtttatgtttatctagatt-atctttattggatttattcatgttggagatttaccc-ttttgtcgggacttgaagaactttt 66617  T
Q  111 atgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgacttt 210  Q
    | |||||||||||||| |||| |||  |||||||| || ||||||| | |||||||||  |  |||||||||||||||| |||||||| ||||||| |||    
T  66616 acgttgatgtattttttatat-catagcatgtatgttttgaagtatat-ggtttatatctgtggcgactgttgagatttttatgcatgtatgttgaattt 66519  T
Q  211 gaattttgt 219  Q
    |||||||||    
T  66518 gaattttgt 66510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 1507 - 1302
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggattt--attcatgttggaaatttaccccttttgccgggacttggagaa-catt 109  Q
    ||||||||||||||||||||||  ||   ||| ||||||||||||||||||  ||| |||||||| |||||||| | |||   ||| |||||||  |||     
T  1507 gctctgatctaggcgtctgttagatttc-ctagatttatctgtttggattttcatttatgttggagatttacccttgttg---ggatttggagattcatc 1412  T
Q  110 tatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactt 209  Q
    |||||||||||||| |||||  |||||| |||||||||| |||||| | ||||||||||| ||| ||||||||||||||| ||||||||||| || | ||    
T  1411 tatgttgatgtattattgat--tcatgatatgtatgctt-gaagtactctggtttatattggctacgactgttgagatttttatgcatgcatattaagtt 1315  T
Q  210 tgaattttgtatg 222  Q
    |||||||||||||    
T  1314 tgaattttgtatg 1302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 55 - 200
Target Start/End: Original strand, 2162 - 2304
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    ||||||||||||||||||||| |||||||| ||| | |||||||| |||||| ||||||||||||||||| ||||| ||||  ||||||||||| ||| |    
T  2162 tttggatttattcatgttggagatttacccattt-gtcgggacttagagaacttttatgttgatgtatttgtgata-tcatagcatgtatgctttgaatt 2259  T
Q  155 attttggtttatattcgctgcgactgttgagatttgtatgcatgca 200  Q
    | |||||||||||  ||||| |||||||||||||| ||| ||||||    
T  2260 a-tttggtttatacccgctgtgactgttgagatttttatacatgca 2304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 204
Target Start/End: Original strand, 7188 - 7333
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaagt 154  Q
    ||||||||||||||||||||| ||||| ||| |||| | |||||| |||||| ||||||||||||||||||||||| ||||| ||||||| ||| |||||    
T  7188 tttggatttattcatgttggagattta-cccatttgtcaggactttgagaac-tttatgttgatgtatttttgata-tcatggcatgtatactttgaagt 7284  T
Q  155 attttggtttatattcgctgcgactgttgagatttgtatgcatgcatgtt 204  Q
    | | |||||||||| ||||| |||  ||||||||| ||| ||||||||||    
T  7285 a-tatggtttatatccgctgtgacaattgagatttttatacatgcatgtt 7333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 72318 - 72429
Alignment:
Q  110 tatgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgact 208  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||| |||||||||| |||| ||| ||||| ||||   |||||||||||| || |    
T  72318 tatgttgatgtattatttgat--tcatgacatgtatgcttcgaagtattctggtttatatccgctacgattgttgcgattctgatgcatgcatgtcgaat 72415  T
Q  209 ttgaattttgtatg 222  Q
    ||||||||||||||    
T  72416 ttgaattttgtatg 72429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 3541 - 3712
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggattt-attcatgttggaaatttaccccttttgccgggacttggagaa-cattt 110  Q
    ||||||||||||||||||||||  ||   ||| |||||||||||||||||| ||||||| |||| |||||||| || |    ||| |||||||  ||| |    
T  3541 gctctgatctaggcgtctgttagatttc-ctagatttatctgtttggatttcattcatgatggagatttacccgttgtta--ggatttggagattcatct 3637  T
Q  111 atgttgatgtatt-tttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagat 187  Q
    ||||||||||||| ||||||  ||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||    
T  3638 atgttgatgtattatttgat--tcatgacatgtatgctt-gaagtattctggtttatatccgctgcgactgttgagat 3712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 31679 - 31850
Alignment:
Q  48 ttatctgtttggatttattcatgtt-ggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgc 146  Q
    |||| |||||||||||||||||||| ||| |||||||| ||| | ||||||||||||||| |||||| | |||||| || |||||  ||| ||||||||     
T  31679 ttatttgtttggatttattcatgtttggagatttacccattt-gtcgggacttggagaacttttatgattatgtatctt-gatata-atggcatgtatgt 31775  T
Q  147 ttcgaagtatttt--ggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    || |||||||| |  | ||||||| ||||||||||| |||||||| |||||||||||||||  || |||||||||    
T  31776 tttgaagtattatatgatttatatccgctgcgactgatgagatttttatgcatgcatgttgttttcgaattttgt 31850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 222
Target Start/End: Original strand, 7692 - 7870
Alignment:
Q  47 tttatctgtttggattt-attcatgttggaaatttaccccttttgccgggacttggagaa-catttatgttgatgtatt-tttgatattcatgacatgta 143  Q
    ||||||||||||||||| |||||||||||| |||||||| || |   |||| |||||||  ||| |||||||||||||| ||||||  ||||||||| ||    
T  7692 tttatctgtttggattttattcatgttggagatttacccgttgtt--gggatttggagattcatctatgttgatgtattatttgat--tcatgacatata 7787  T
Q  144 tgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtat----gcatgcatgttgactttgaattttgtatg 222  Q
    ||| |||||||||| ||||||||||  ||||||||||||||||||| | |    ||||||||||||| | | |||||||||||    
T  7788 tgcctcgaagtattctggtttatatctgctgcgactgttgagatttttttttacgcatgcatgttgaatataaattttgtatg 7870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 5956 - 5750
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttggattt--attcatgttggaaatttaccccttttgccgggacttggagaa-catt 109  Q
    ||||||||||||||||||||||  ||   ||| ||| ||||||||||||||  ||| |||||||  |||||||| || |   |||| |||||||  ||||    
T  5956 gctctgatctaggcgtctgttagatttc-ctatattgatctgtttggattttcatttatgttggggatttacccgttgtt--gggatttggagattcatt 5860  T
Q  110 tatgttgatgtatttttgatattcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactt 209  Q
    |||| ||||||||| |||||  |||||| ||  |||||| |||||| | ||||||||||  |||||| |||||||||||| |||||||||||||||  ||    
T  5859 tatggtgatgtattattgat--tcatgatattaatgctt-gaagtactctggtttatatctgctgcgtctgttgagatttatatgcatgcatgttggatt 5763  T
Q  210 tgaattttgtatg 222  Q
    |||||||||||||    
T  5762 tgaattttgtatg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 9445 - 9336
Alignment:
Q  106 catttatgttgatgtatttttgatattcatgacatgtatgcttc-gaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgtt 204  Q
    ||||||||||||||||||||||| || |||  |||||||||||  ||| ||| | ||||||||| | |||||||||||||||||| ||||||||||||||    
T  9445 catttatgttgatgtatttttgacat-catagcatgtatgcttttgaattatat-ggtttatatccactgcgactgttgagatttttatgcatgcatgtt 9348  T
Q  205 gactttgaattt 216  Q
    || |||||||||    
T  9347 gaatttgaattt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 19858 - 20019
Alignment:
Q  55 tttggatttattcatgtt-ggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaag 153  Q
    ||||||||||||||| || ||| |||||||| ||| | ||||||||||||||  |||||| | ||||||||| ||||| |||| ||||||||||| ||||    
T  19858 tttggatttattcatatttggagatttacccattt-gtcgggacttggagaaattttatgattatgtatttt-gatat-catggcatgtatgctttgaag 19954  T
Q  154 tattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    ||| | ||||||||| |||| ||||||||| |||||  ||  ||||||||||| |||| |||||||    
T  19955 tatat-ggtttatatccgctacgactgttgcgattttaatatatgcatgttgattttggattttgt 20019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 29434 - 29595
Alignment:
Q  55 tttggatttattcatgtt-ggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaag 153  Q
    ||||||||||||||| || ||| |||||||| ||| | ||||||||||||||  |||||| | ||||||||| ||||| |||| ||||||||||| ||||    
T  29434 tttggatttattcatatttggagatttacccattt-gtcgggacttggagaaattttatgattatgtatttt-gatat-catggcatgtatgctttgaag 29530  T
Q  154 tattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    ||| | ||||||||| |||| ||||||||| |||||  ||  ||||||||||| |||| |||||||    
T  29531 tatat-ggtttatatccgctacgactgttgcgattttaatatatgcatgttgattttggattttgt 29595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 9587 - 9527
Alignment:
Q  159 tggtttatatt-cgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    ||||||||||| |||||||||||||||||||| | |||||||||||||| |||||||||||    
T  9587 tggtttatattacgctgcgactgttgagatttatttgcatgcatgttgagtttgaattttg 9527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 106650 - 106786
Alignment:
Q  50 atctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttc 149  Q
    ||||||||||||||||| |||||||| ||||| ||| |||| ||||||| ||||||| ||||||   |||||||||||||| ||||| |||||||  ||     
T  106650 atctgtttggatttatttatgttggatattta-cccatttgtcgggactcggagaac-tttatgacaatgtatttttgata-tcatggcatgtatatttt 106746  T
Q  150 gaagtattttggtttat-attcgctgcgactgttgagattt 189  Q
    |||||| | |||||||| || ||||||||||||||||||||    
T  106747 gaagta-tatggtttataatccgctgcgactgttgagattt 106786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 1421 - 1310
Alignment:
Q  13 gctctgatctaggcgtctgttatgttggtctaaatttatctgtttg-gatttattcatgttggaaatttaccccttttgccgggacttggagaacattta 111  Q
    ||||||||||||| ||||||| || |  |||| ||| ||||||||  ||||||||||||||||| ||||||||  || | ||||||||||||||| ||||    
T  1421 gctctgatctaggtgtctgttttgattatctagatt-atctgtttcagatttattcatgttggagatttacccactt-gtcgggacttggagaactttta 1324  T
Q  112 tgttgatgtatttt 125  Q
    ||||||||||||||    
T  1323 tgttgatgtatttt 1310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 4041 - 3953
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||||||  || || ||| | |||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  4041 attcatgacatgtatatttgga-gtactctggtttatattccgctacgactgttgagatttatatgcatgcatgttgagtttgaattttg 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 10507 - 10419
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||||||  || || ||| | |||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  10507 attcatgacatgtatatttgga-gtactctggtttatattccgctacgactgttgagatttatatgcatgcatgttgagtttgaattttg 10419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 93969 - 93909
Alignment:
Q  159 tggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||    
T  93969 tggtttatattccgctgcgatggttgagatttgtatgcatgcatgttgagtttgaattttg 93909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 144728 - 144637
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    ||||||||||||||| | | || ||| | |||||||||| ||||||||||||||||||||  |||||||||| |||  |||||||||||||||    
T  144728 attcatgacatgtatacctgga-gtactctggtttatatccgctgcgactgttgagatttacatgcatgcatattggatttgaattttgtatg 144637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 7010 - 6951
Alignment:
Q  159 tggtttatattcgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||| || |||||||||| |||||| |||||||||||||||| |||||||||||    
T  7010 tggtttatatccgatgcgactgttaagatttatatgcatgcatgttgagtttgaattttg 6951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 14412 - 14500
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||||||  || || ||| | |||||||||||| |||||||||| |||||||| |||||||||||| ||| |||||||||||    
T  14412 attcatgacatgtatcttttga-gtactctggtttatattccgctgcgactgctgagatttatatgcatgcatgatgagtttgaattttg 14500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 3072 - 2908
Alignment:
Q  55 tttggatttattcatgtt-ggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtatgcttcgaag 153  Q
    |||||||||||||||||| ||| |||||| | ||| | ||||||||||||||  |||||| | ||||| |||||||| ||||| ||||||||||| ||||    
T  3072 tttggatttattcatgtttggagatttacgcattt-gtcgggacttggagaatttttatgattatgta-ttttgata-tcatggcatgtatgctttgaag 2976  T
Q  154 tattttggtttatattcgctgcgactgttgag-atttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |    |||||||||| |||||||| ||||||| |||| ||| |||||||||||  |||| ||||||||||    
T  2975 t-gaatggtttatatccgctgcgattgttgagaatttttatacatgcatgttg-ttttggattttgtatg 2908  T

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Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 3274 - 3182
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||||||||||||||  || || ||| | |||||||||||| ||||||||||||||||||| ||| ||||||||| || ||||| |||||||||    
T  3274 attcatgacatgtatatttgga-gtactctggtttatattccgctgcgactgttgagatttatatacatgcatgtggagtttgagttttgtatg 3182  T

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Target: scaffold0132; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 11234 - 11142
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgtatg 222  Q
    |||||||||||||||  || || ||| | |||||||||||| ||||||||||||||||||| ||| ||||||||| || ||||| |||||||||    
T  11234 attcatgacatgtatatttgga-gtactctggtttatattccgctgcgactgttgagatttatatacatgcatgtggagtttgagttttgtatg 11142  T

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Target: scaffold0434 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 2638 - 2592
Alignment:
Q  159 tggtttatattc-gctgcgactgttgagatttgtatgcatgcatgtt 204  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  2638 tggtttatattccgctgcgactgttgagatttatatgcatgcatgtt 2592  T

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Target: scaffold0028 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 70341 - 70431
Alignment:
Q  50 atctgtttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgtat 144  Q
    ||||||||||||||| | |||||||  |||||||| ||| | ||||||| ||||||| ||||||| ||||||||||||||||| |||||||||||    
T  70341 atctgtttggatttact-atgttgggtatttacccattt-gtcgggactcggagaac-tttatgtcgatgtatttttgatatt-atgacatgtat 70431  T

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Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 77818 - 77699
Alignment:
Q  101 gagaacatttatgttgatgtatttttgatattcatgacatgtatgcttc-gaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgc 199  Q
    ||||||||||| ||||||||||||| || || ||||||||||||| ||  ||| ||| | |||||||||  |||||||||| |||||||| || ||||||    
T  77818 gagaacatttacgttgatgtatttt-gacat-catgacatgtatgtttttgaattatat-ggtttatatctgctgcgactgatgagatttttaagcatgc 77722  T
Q  200 atgttgacttt-gaattttgtat 221  Q
    ||||||| ||| |||||||||||    
T  77721 atgttgattttggaattttgtat 77699  T

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Target: scaffold0610 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 2771 - 2859
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatatt-cgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    |||||||||||||||  || || ||| | ||||||||||| || |||| || ||||||||| |||||||||||||||| |||||||||||    
T  2771 attcatgacatgtatatttgga-gtactctggtttatatttcgttgcgtctattgagatttatatgcatgcatgttgagtttgaattttg 2859  T

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Target: scaffold0247 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 16698 - 16786
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattcgctgcgactgttgagatttgtatgcatgcatgttga-ctttgaattttg 218  Q
    |||||||||||||||  || || ||| | |||||||||| || ||||||| ||||||||| ||||||||||||||||  |||||||||||    
T  16698 attcatgacatgtatatttgga-gtactctggtttatatccgatgcgactattgagatttatatgcatgcatgttgagttttgaattttg 16786  T

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Target: scaffold0175 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 7260 - 7370
Alignment:
Q  93 gggacttggagaacatttatgttgatgtatttttgatattcatgacatgtat-gcttcgaagtattttggtttatattc-gctgcgactgttgagatttg 190  Q
    |||||||||||||  ||||| ||||| |||||||||||| |||| ||||||| | || ||||||| | |||||||| || ||||||||| |||||||||     
T  7260 gggacttggagaat-tttatattgatatatttttgatat-catggcatgtattgatttgaagtatat-ggtttataatccgctgcgactattgagattta 7356  T
Q  191 tatgcatgcatgtt 204  Q
    ||||||||||||||    
T  7357 tatgcatgcatgtt 7370  T

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Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 24460 - 24620
Alignment:
Q  46 atttatctgtttggatt--tattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatgtatttttgatattcatgacatgta 143  Q
    |||||| ||||||||||  | ||||||||||| |||||||| || |   |||| |||||||  ||| |||||||||||||||||    ||||||||||||    
T  24460 atttatttgtttggattattgttcatgttggagatttacccattatt--gggatttggagattattcatgttgatgtatttttggacatcatgacatgta 24557  T
Q  144 tgcttc-gaagtattttggtttatattc-gctgcgactgttgagatttgtatgcatgcatgttg 205  Q
    |||||  ||| ||| | |||||||| || |||||||||| ||| |||| |||||||||||||||    
T  24558 tgcttttgaattatat-ggtttataatccgctgcgactgatgaaatttatatgcatgcatgttg 24620  T

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Target: scaffold0507 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 5556 - 5604
Alignment:
Q  171 gctgcgactgttgagatttgtatgcatgcatgttgactttgaattttgt 219  Q
    ||||||||||||||||||| |||||||||||||||  || |||||||||    
T  5556 gctgcgactgttgagatttatatgcatgcatgttgttttggaattttgt 5604  T

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Target: scaffold0023 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 91951 - 91903
Alignment:
Q  170 cgctgcgactgttgagatttgtatgcatgcatgttgactttgaattttg 218  Q
    ||||||||||||||||  || |||||||||||||||| |||||||||||    
T  91951 cgctgcgactgttgaggattatatgcatgcatgttgattttgaattttg 91903  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 199414 - 199476
Alignment:
Q  55 tttggatttattcatgttggaaatttaccccttttgccgggacttggagaacatttatgttgatg 119  Q
    ||||||||||||||||||||| |||||||| |||    ||||||| |||||| ||||||||||||    
T  199414 tttggatttattcatgttggagatttacccattt--atgggactttgagaacttttatgttgatg 199476  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 55921 - 55846
Alignment:
Q  130 attcatgacatgtatgcttcgaagtattttggtttatattc-gctgcgactgttgagatt-tgtatgcatgcatgtt 204  Q
    |||||||||||||||  ||||| ||| | |||||||||||| |||||||||||||||||| | ||||||||| ||||    
T  55921 attcatgacatgtatatttcga-gtactctggtttatattccgctgcgactgttgagattatatatgcatgcgtgtt 55846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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