View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7285_low_7 (Length: 252)
Name: NF7285_low_7
Description: NF7285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7285_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 4176375 - 4176624
Alignment:
| Q |
1 |
acttgtatgcaacattttgtgatttttaatcatatattttacttgtttcatgtgaagnnnnnnnnnnttgtattcaatcacctaacctagtccctcagtt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
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| T |
4176375 |
acttgtatgcaacattttgtgatttttaatcatatattttacttgtttcatgtg--gaaaaaaaaaattgtattcaatcacctaacctagtccctcagtt |
4176472 |
T |
|
| Q |
101 |
cttgtgatgcacactcctaagctttagttnnnnnnnn----taaagttggtaaacaagatatctaatgtcacataacttattttgactcgtaagtcataa |
196 |
Q |
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|
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4176473 |
cttgtgatgcacactcctaagccttagttaaaaaaataaagtaaagttggtaaacaagatatctaatgtcacataacttattttgactcgtaagtcataa |
4176572 |
T |
|
| Q |
197 |
gaactcttaactactaagtaatgcatttaggaagaacaaccaacaccaaact |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
4176573 |
gaactcttaactactaagtaatgcatttaggaagaacaaccaacaccaaact |
4176624 |
T |
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