View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7288_low_17 (Length: 231)
Name: NF7288_low_17
Description: NF7288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7288_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 216
Target Start/End: Original strand, 11380486 - 11380688
Alignment:
| Q |
14 |
ttggagttccttattgactttgtctaattttcttttcatgttgtcaatttcttctttcgctttctgtagcgcttcctctaactctttccttagttttacc |
113 |
Q |
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| T |
11380486 |
ttggagttccttgttgactttgtctaatttgcttttcatgttgtcaatttcttctttcgctttctgtagcgcttcctctaactctttccttagttttacc |
11380585 |
T |
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| Q |
114 |
tcttcttcatacaagattatggtgtctttagtctgtatattggatttttcaaacatttgtatcaagtttatttcagcaacattcggaaataattttagag |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11380586 |
tcttcttcatacaagattatggtgtctttagtctgtatattggatttttcaaacatttgtatcaagtttatttcagcaacattcggaaataattttagag |
11380685 |
T |
|
| Q |
214 |
tag |
216 |
Q |
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| T |
11380686 |
tag |
11380688 |
T |
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