View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7290_low_12 (Length: 316)

Name: NF7290_low_12
Description: NF7290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7290_low_12
NF7290_low_12
[»] chr4 (43 HSPs)
chr4 (43-294)||(25513653-25513904)
chr4 (42-242)||(26446061-26446261)
chr4 (43-242)||(14630991-14631188)
chr4 (42-242)||(2424385-2424585)
chr4 (43-137)||(16296897-16296991)
chr4 (43-152)||(9638954-9639063)
chr4 (43-154)||(15239815-15239927)
chr4 (50-146)||(35660906-35661002)
chr4 (44-149)||(33186850-33186955)
chr4 (235-304)||(2424706-2424775)
chr4 (43-150)||(9622434-9622542)
chr4 (43-150)||(55583141-55583249)
chr4 (44-149)||(12424290-12424397)
chr4 (235-304)||(26445871-26445940)
chr4 (86-154)||(45314124-45314193)
chr4 (86-154)||(26921550-26921619)
chr4 (33-104)||(13847193-13847264)
chr4 (43-150)||(14477578-14477684)
chr4 (235-304)||(15747904-15747973)
chr4 (235-291)||(16025937-16025993)
chr4 (153-240)||(19622093-19622179)
chr4 (58-120)||(15747787-15747849)
chr4 (235-291)||(14630814-14630870)
chr4 (61-120)||(17142998-17143057)
chr4 (43-146)||(18462974-18463076)
chr4 (43-107)||(10273372-10273436)
chr4 (235-304)||(17142876-17142942)
chr4 (159-230)||(19080175-19080245)
chr4 (43-96)||(37019670-37019723)
chr4 (86-149)||(12623264-12623327)
chr4 (86-149)||(19565959-19566022)
chr4 (86-149)||(46741147-46741210)
chr4 (118-149)||(16296819-16296850)
chr4 (92-150)||(20150771-20150830)
chr4 (43-96)||(15115222-15115275)
chr4 (25-62)||(19739772-19739809)
chr4 (25-62)||(27996825-27996862)
chr4 (257-289)||(10237422-10237454)
chr4 (44-96)||(11425943-11425995)
chr4 (44-96)||(19610324-19610376)
chr4 (44-96)||(25091653-25091705)
chr4 (44-96)||(42875797-42875849)
chr4 (44-96)||(53630474-53630526)
[»] chr1 (35 HSPs)
chr1 (43-240)||(28476733-28476930)
chr1 (42-242)||(24719509-24719708)
chr1 (43-204)||(12710759-12710920)
chr1 (17-152)||(8275962-8276097)
chr1 (43-152)||(38056671-38056780)
chr1 (43-127)||(50544841-50544925)
chr1 (43-149)||(24007224-24007330)
chr1 (44-130)||(22145666-22145752)
chr1 (43-150)||(34392713-34392821)
chr1 (43-149)||(8306552-8306659)
chr1 (43-149)||(39061268-39061373)
chr1 (43-107)||(17901793-17901857)
chr1 (43-122)||(6834150-6834229)
chr1 (235-294)||(28477053-28477112)
chr1 (43-150)||(45499487-45499595)
chr1 (44-150)||(20588581-20588690)
chr1 (44-150)||(20593119-20593228)
chr1 (43-104)||(635003-635064)
chr1 (43-107)||(35895088-35895152)
chr1 (43-146)||(21188033-21188135)
chr1 (43-149)||(20708058-20708163)
chr1 (92-150)||(40390096-40390155)
chr1 (92-152)||(14294858-14294919)
chr1 (145-201)||(41931146-41931202)
chr1 (92-152)||(51131317-51131378)
chr1 (43-82)||(7703136-7703175)
chr1 (235-269)||(20822729-20822763)
chr1 (86-119)||(14792604-14792637)
chr1 (86-119)||(21243799-21243832)
chr1 (43-96)||(42913049-42913102)
chr1 (43-107)||(12327742-12327806)
chr1 (44-96)||(19676711-19676763)
chr1 (44-96)||(21046049-21046101)
chr1 (86-149)||(38887128-38887191)
chr1 (43-107)||(51336468-51336532)
[»] chr7 (58 HSPs)
chr7 (42-242)||(43745510-43745710)
chr7 (43-234)||(15575648-15575839)
chr7 (43-242)||(47095306-47095505)
chr7 (43-239)||(20252181-20252381)
chr7 (42-242)||(48212725-48212927)
chr7 (43-242)||(18874664-18874859)
chr7 (42-234)||(4690661-4690851)
chr7 (81-201)||(16186808-16186928)
chr7 (43-146)||(19195562-19195664)
chr7 (43-152)||(708428-708537)
chr7 (31-119)||(8513740-8513828)
chr7 (31-119)||(8488081-8488169)
chr7 (43-150)||(58412-58517)
chr7 (43-150)||(15700734-15700840)
chr7 (235-304)||(4690980-4691049)
chr7 (235-304)||(43745320-43745389)
chr7 (44-150)||(25943213-25943319)
chr7 (43-106)||(38299738-38299801)
chr7 (43-150)||(8930764-8930872)
chr7 (44-149)||(43276744-43276848)
chr7 (235-304)||(831981-832050)
chr7 (235-304)||(1197161-1197230)
chr7 (235-304)||(34958196-34958265)
chr7 (43-107)||(16250221-16250285)
chr7 (43-150)||(13744509-13744614)
chr7 (235-294)||(47095126-47095185)
chr7 (43-150)||(33556104-33556211)
chr7 (44-150)||(15720724-15720831)
chr7 (235-304)||(48213032-48213101)
chr7 (43-150)||(18570592-18570700)
chr7 (58-120)||(34958321-34958383)
chr7 (84-146)||(42565872-42565934)
chr7 (43-107)||(13315081-13315145)
chr7 (144-227)||(16368271-16368354)
chr7 (43-97)||(3287743-3287797)
chr7 (235-289)||(18079617-18079671)
chr7 (44-101)||(19283051-19283108)
chr7 (48-112)||(15700887-15700951)
chr7 (92-152)||(16496154-16496215)
chr7 (31-96)||(47974807-47974872)
chr7 (86-149)||(9743120-9743183)
chr7 (43-146)||(33060389-33060491)
chr7 (58-120)||(831864-831926)
chr7 (58-120)||(1197044-1197106)
chr7 (92-149)||(15119354-15119411)
chr7 (34-96)||(20214147-20214209)
chr7 (43-149)||(21661204-21661309)
chr7 (43-96)||(12127162-12127215)
chr7 (43-96)||(14180397-14180450)
chr7 (43-96)||(20586352-20586405)
chr7 (44-96)||(8851159-8851211)
chr7 (44-96)||(11067468-11067520)
chr7 (44-96)||(12372274-12372326)
chr7 (44-96)||(12465260-12465312)
chr7 (86-149)||(14160897-14160960)
chr7 (86-149)||(14318020-14318083)
chr7 (44-96)||(32433589-32433641)
chr7 (33-97)||(35771430-35771494)
[»] chr8 (40 HSPs)
chr8 (44-242)||(21514545-21514743)
chr8 (44-242)||(18816295-18816493)
chr8 (42-242)||(4380615-4380807)
chr8 (42-146)||(36732410-36732514)
chr8 (43-149)||(12577826-12577932)
chr8 (43-149)||(22208216-22208322)
chr8 (44-140)||(22258306-22258403)
chr8 (43-150)||(21399662-21399770)
chr8 (43-157)||(21676592-21676704)
chr8 (43-150)||(21794155-21794263)
chr8 (235-304)||(18023653-18023722)
chr8 (235-304)||(38185044-38185113)
chr8 (43-150)||(22610266-22610371)
chr8 (43-146)||(21678845-21678946)
chr8 (44-150)||(18834371-18834474)
chr8 (235-304)||(20494632-20494701)
chr8 (48-107)||(22483775-22483834)
chr8 (235-292)||(21514367-21514424)
chr8 (43-131)||(21676499-21676585)
chr8 (58-120)||(18023570-18023632)
chr8 (43-107)||(22345153-22345217)
chr8 (43-107)||(22356813-22356877)
chr8 (58-122)||(22483912-22483976)
chr8 (43-150)||(23884116-23884222)
chr8 (58-116)||(38184926-38184984)
chr8 (43-106)||(36305988-36306050)
chr8 (44-149)||(21579206-21579310)
chr8 (31-96)||(17906836-17906901)
chr8 (235-289)||(22366072-22366123)
chr8 (86-149)||(22474704-22474767)
chr8 (86-140)||(12037205-12037260)
chr8 (92-150)||(22966756-22966815)
chr8 (86-140)||(29762909-29762964)
chr8 (33-96)||(39694266-39694329)
chr8 (43-149)||(22708323-22708428)
chr8 (235-289)||(22723251-22723305)
chr8 (94-150)||(21697509-21697566)
chr8 (86-149)||(17978457-17978520)
chr8 (44-96)||(20083638-20083690)
chr8 (86-149)||(41680174-41680237)
[»] scaffold0056 (1 HSPs)
scaffold0056 (42-242)||(18129-18329)
[»] scaffold0878 (2 HSPs)
scaffold0878 (43-242)||(3421-3620)
scaffold0878 (235-304)||(3741-3810)
[»] chr3 (51 HSPs)
chr3 (43-242)||(17208378-17208577)
chr3 (43-242)||(14520300-14520499)
chr3 (42-242)||(24547054-24547254)
chr3 (42-242)||(24548952-24549149)
chr3 (43-152)||(29907582-29907692)
chr3 (43-152)||(29948748-29948858)
chr3 (43-152)||(29997902-29998012)
chr3 (31-149)||(14152386-14152504)
chr3 (43-152)||(14641547-14641656)
chr3 (43-150)||(22841278-22841390)
chr3 (44-149)||(5215594-5215699)
chr3 (44-150)||(54875474-54875581)
chr3 (33-150)||(17684824-17684942)
chr3 (43-150)||(3527156-3527261)
chr3 (43-150)||(2841505-2841613)
chr3 (43-150)||(6156656-6156763)
chr3 (43-150)||(6159350-6159458)
chr3 (235-304)||(2247998-2248067)
chr3 (33-150)||(17669687-17669805)
chr3 (43-154)||(50350815-50350928)
chr3 (43-150)||(14442120-14442228)
chr3 (235-292)||(24546876-24546933)
chr3 (43-119)||(15566721-15566797)
chr3 (43-155)||(21845651-21845762)
chr3 (43-146)||(3160626-3160728)
chr3 (51-122)||(45803338-45803409)
chr3 (235-290)||(24549270-24549325)
chr3 (58-120)||(2247880-2247942)
chr3 (84-150)||(48631278-48631344)
chr3 (43-122)||(12917305-12917384)
chr3 (43-149)||(6003133-6003238)
chr3 (247-289)||(25104106-25104148)
chr3 (58-149)||(50755268-50755360)
chr3 (105-146)||(13520408-13520449)
chr3 (31-107)||(16050916-16050992)
chr3 (44-96)||(17539106-17539158)
chr3 (86-149)||(53646100-53646163)
chr3 (86-149)||(54330348-54330411)
chr3 (43-155)||(25202075-25202187)
chr3 (43-97)||(33565086-33565140)
chr3 (109-150)||(12155089-12155130)
chr3 (43-96)||(24177735-24177788)
chr3 (43-96)||(40807996-40808049)
chr3 (43-96)||(44274418-44274471)
chr3 (44-96)||(11259431-11259483)
chr3 (90-150)||(12150993-12151053)
chr3 (118-150)||(13522353-13522385)
chr3 (44-96)||(17044966-17045018)
chr3 (44-96)||(17047126-17047178)
chr3 (44-96)||(17541434-17541486)
chr3 (44-96)||(22306583-22306635)
[»] chr2 (19 HSPs)
chr2 (43-242)||(21315475-21315674)
chr2 (43-242)||(21335265-21335464)
chr2 (43-242)||(21369147-21369346)
chr2 (42-242)||(23610474-23610680)
chr2 (86-154)||(28652593-28652662)
chr2 (43-149)||(149500-149610)
chr2 (43-150)||(28344987-28345092)
chr2 (84-149)||(25584302-25584367)
chr2 (43-150)||(34491239-34491350)
chr2 (43-146)||(20005970-20006072)
chr2 (84-150)||(19647180-19647246)
chr2 (43-107)||(23801485-23801549)
chr2 (43-146)||(45535876-45535978)
chr2 (118-150)||(25584186-25584218)
chr2 (43-96)||(17307486-17307539)
chr2 (43-96)||(24516186-24516239)
chr2 (43-96)||(40912320-40912373)
chr2 (44-96)||(5031129-5031181)
chr2 (44-96)||(24780840-24780892)
[»] chr5 (24 HSPs)
chr5 (44-242)||(23199207-23199405)
chr5 (42-242)||(660644-660842)
chr5 (48-242)||(1627071-1627266)
chr5 (43-205)||(18744765-18744927)
chr5 (43-146)||(16063701-16063804)
chr5 (43-146)||(6551289-6551392)
chr5 (43-150)||(32607315-32607423)
chr5 (235-304)||(1627387-1627456)
chr5 (235-291)||(18744558-18744614)
chr5 (43-150)||(21398643-21398752)
chr5 (89-155)||(21504081-21504147)
chr5 (31-149)||(26762350-26762467)
chr5 (48-148)||(21398800-21398904)
chr5 (92-150)||(24068175-24068234)
chr5 (42-119)||(1626916-1626992)
chr5 (42-150)||(26749978-26750085)
chr5 (43-145)||(20313226-20313328)
chr5 (118-150)||(22111923-22111955)
chr5 (255-294)||(660467-660506)
chr5 (86-119)||(14025848-14025881)
chr5 (43-96)||(21300043-21300096)
chr5 (25-62)||(21914473-21914510)
chr5 (92-152)||(36315305-36315366)
chr5 (86-149)||(8833247-8833310)
[»] scaffold1186 (2 HSPs)
scaffold1186 (43-242)||(1876-2073)
scaffold1186 (235-291)||(1699-1755)
[»] scaffold0231 (1 HSPs)
scaffold0231 (43-242)||(17520-17719)
[»] scaffold0005 (2 HSPs)
scaffold0005 (43-242)||(186195-186392)
scaffold0005 (235-291)||(186513-186569)
[»] scaffold0369 (2 HSPs)
scaffold0369 (43-242)||(15615-15813)
scaffold0369 (235-304)||(15934-16003)
[»] chr6 (30 HSPs)
chr6 (44-242)||(20410512-20410708)
chr6 (141-304)||(21686158-21686321)
chr6 (17-179)||(15998806-15998968)
chr6 (42-141)||(21683073-21683171)
chr6 (43-134)||(19825485-19825576)
chr6 (43-152)||(18982515-18982625)
chr6 (43-140)||(23658044-23658142)
chr6 (43-150)||(1818899-1819005)
chr6 (43-150)||(10446162-10446270)
chr6 (43-144)||(34140455-34140554)
chr6 (43-107)||(29045260-29045324)
chr6 (84-146)||(24506155-24506217)
chr6 (86-154)||(25601371-25601437)
chr6 (43-144)||(34153071-34153170)
chr6 (31-149)||(31734655-31734772)
chr6 (89-149)||(18982362-18982422)
chr6 (86-149)||(7217285-7217347)
chr6 (86-140)||(22557204-22557259)
chr6 (43-140)||(25921957-25922054)
chr6 (43-120)||(13285724-13285801)
chr6 (43-96)||(15890711-15890764)
chr6 (25-62)||(16966800-16966837)
chr6 (25-62)||(18259155-18259192)
chr6 (25-62)||(20183754-20183791)
chr6 (25-62)||(22152200-22152237)
chr6 (44-96)||(7827972-7828024)
chr6 (33-97)||(12041609-12041673)
chr6 (44-96)||(19655231-19655283)
chr6 (44-96)||(23150287-23150339)
chr6 (86-149)||(23431488-23431551)
[»] scaffold0203 (1 HSPs)
scaffold0203 (43-241)||(17939-18137)
[»] scaffold0853 (1 HSPs)
scaffold0853 (44-242)||(2454-2652)
[»] scaffold0516 (1 HSPs)
scaffold0516 (42-227)||(5303-5488)
[»] scaffold0032 (2 HSPs)
scaffold0032 (43-241)||(61847-62048)
scaffold0032 (17-62)||(68331-68376)
[»] scaffold0162 (1 HSPs)
scaffold0162 (94-242)||(23932-24080)
[»] scaffold0414 (1 HSPs)
scaffold0414 (44-242)||(11160-11359)
[»] scaffold0676 (2 HSPs)
scaffold0676 (43-146)||(2831-2934)
scaffold0676 (84-149)||(2762-2828)
[»] scaffold0247 (1 HSPs)
scaffold0247 (44-150)||(1022-1128)
[»] scaffold0007 (4 HSPs)
scaffold0007 (43-152)||(16418-16528)
scaffold0007 (43-152)||(18700-18811)
scaffold0007 (89-149)||(18902-18962)
scaffold0007 (89-149)||(16619-16679)
[»] scaffold0505 (1 HSPs)
scaffold0505 (44-154)||(4878-4988)
[»] scaffold0220 (2 HSPs)
scaffold0220 (25-152)||(13893-14019)
scaffold0220 (31-97)||(19953-20019)
[»] scaffold0061 (2 HSPs)
scaffold0061 (43-146)||(14585-14689)
scaffold0061 (43-146)||(23643-23747)
[»] scaffold0328 (1 HSPs)
scaffold0328 (43-152)||(18639-18749)
[»] scaffold0213 (2 HSPs)
scaffold0213 (43-149)||(19154-19260)
scaffold0213 (97-142)||(19115-19160)
[»] scaffold0017 (2 HSPs)
scaffold0017 (47-154)||(26669-26776)
scaffold0017 (43-146)||(23564-23666)
[»] scaffold1256 (1 HSPs)
scaffold1256 (42-131)||(2198-2287)
[»] scaffold0125 (1 HSPs)
scaffold0125 (84-154)||(28493-28564)
[»] scaffold0555 (1 HSPs)
scaffold0555 (43-150)||(8745-8853)
[»] scaffold0431 (1 HSPs)
scaffold0431 (44-149)||(5578-5685)
[»] scaffold0379 (1 HSPs)
scaffold0379 (44-150)||(10893-10999)
[»] scaffold0298 (2 HSPs)
scaffold0298 (235-304)||(236-305)
scaffold0298 (58-120)||(361-423)
[»] scaffold0139 (2 HSPs)
scaffold0139 (43-149)||(40160-40268)
scaffold0139 (43-127)||(23503-23587)
[»] scaffold0108 (1 HSPs)
scaffold0108 (43-119)||(6395-6471)
[»] scaffold0594 (1 HSPs)
scaffold0594 (43-122)||(2221-2300)
[»] scaffold0092 (1 HSPs)
scaffold0092 (43-146)||(38441-38543)
[»] scaffold0058 (1 HSPs)
scaffold0058 (43-146)||(59655-59757)
[»] scaffold0174 (3 HSPs)
scaffold0174 (43-105)||(5445-5507)
scaffold0174 (43-150)||(19801-19909)
scaffold0174 (44-122)||(11590-11668)
[»] scaffold0098 (1 HSPs)
scaffold0098 (43-150)||(40052-40160)
[»] scaffold0031 (1 HSPs)
scaffold0031 (43-150)||(127342-127450)
[»] scaffold0180 (2 HSPs)
scaffold0180 (235-304)||(10447-10516)
scaffold0180 (58-120)||(10572-10633)
[»] scaffold1766 (1 HSPs)
scaffold1766 (17-96)||(669-748)
[»] scaffold0337 (1 HSPs)
scaffold0337 (43-146)||(3155-3257)
[»] scaffold0020 (3 HSPs)
scaffold0020 (17-96)||(168972-169051)
scaffold0020 (31-149)||(174169-174286)
scaffold0020 (44-96)||(143611-143663)
[»] scaffold0004 (4 HSPs)
scaffold0004 (43-122)||(66071-66150)
scaffold0004 (44-150)||(73032-73139)
scaffold0004 (31-112)||(111344-111425)
scaffold0004 (43-147)||(75885-75990)
[»] scaffold0394 (1 HSPs)
scaffold0394 (43-146)||(7513-7615)
[»] scaffold0086 (1 HSPs)
scaffold0086 (43-122)||(35185-35264)
[»] scaffold0261 (1 HSPs)
scaffold0261 (94-154)||(6468-6529)
[»] scaffold0076 (1 HSPs)
scaffold0076 (17-64)||(22472-22519)
[»] scaffold0217 (1 HSPs)
scaffold0217 (84-150)||(28660-28726)
[»] scaffold0035 (1 HSPs)
scaffold0035 (43-155)||(43786-43898)
[»] scaffold0021 (2 HSPs)
scaffold0021 (84-146)||(17057-17118)
scaffold0021 (84-146)||(26588-26649)
[»] scaffold1939 (1 HSPs)
scaffold1939 (89-150)||(74-135)
[»] scaffold0462 (2 HSPs)
scaffold0462 (100-149)||(1264-1313)
scaffold0462 (100-149)||(6770-6819)
[»] scaffold1800 (1 HSPs)
scaffold1800 (43-146)||(558-660)
[»] scaffold0371 (1 HSPs)
scaffold0371 (31-149)||(10433-10550)
[»] scaffold0059 (1 HSPs)
scaffold0059 (43-146)||(49680-49782)
[»] scaffold0148 (1 HSPs)
scaffold0148 (43-97)||(8843-8897)
[»] scaffold0205 (1 HSPs)
scaffold0205 (43-146)||(5615-5718)
[»] scaffold0184 (1 HSPs)
scaffold0184 (92-152)||(377-438)
[»] scaffold0183 (1 HSPs)
scaffold0183 (153-242)||(11227-11316)
[»] scaffold0385 (1 HSPs)
scaffold0385 (86-149)||(293-356)
[»] scaffold0048 (1 HSPs)
scaffold0048 (43-107)||(68725-68789)
[»] scaffold0001 (4 HSPs)
scaffold0001 (44-96)||(31994-32046)
scaffold0001 (44-96)||(37301-37353)
scaffold0001 (43-96)||(77687-77740)
scaffold0001 (25-62)||(499092-499129)
[»] scaffold0461 (1 HSPs)
scaffold0461 (118-149)||(12433-12464)
[»] scaffold0165 (1 HSPs)
scaffold0165 (43-146)||(31880-31982)
[»] scaffold0120 (1 HSPs)
scaffold0120 (92-150)||(29257-29316)
[»] scaffold1941 (1 HSPs)
scaffold1941 (43-96)||(138-191)
[»] scaffold0632 (1 HSPs)
scaffold0632 (43-96)||(1165-1218)
[»] scaffold0338 (1 HSPs)
scaffold0338 (29-62)||(10747-10780)
[»] scaffold0113 (1 HSPs)
scaffold0113 (43-96)||(35490-35543)
[»] scaffold0065 (1 HSPs)
scaffold0065 (25-62)||(55975-56012)
[»] scaffold1633 (1 HSPs)
scaffold1633 (44-96)||(1205-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (44-96)||(468-520)
[»] scaffold0630 (1 HSPs)
scaffold0630 (86-149)||(9011-9074)
[»] scaffold0439 (2 HSPs)
scaffold0439 (42-149)||(4369-4475)
scaffold0439 (118-150)||(12256-12288)
[»] scaffold0145 (1 HSPs)
scaffold0145 (92-135)||(8085-8129)
[»] scaffold0112 (1 HSPs)
scaffold0112 (149-230)||(13406-13488)
[»] scaffold0063 (1 HSPs)
scaffold0063 (86-149)||(62666-62729)
[»] scaffold0047 (1 HSPs)
scaffold0047 (44-96)||(79049-79101)
[»] scaffold0036 (1 HSPs)
scaffold0036 (44-96)||(78185-78237)
[»] scaffold0019 (1 HSPs)
scaffold0019 (44-96)||(24131-24183)


Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-118; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 43 - 294
Target Start/End: Complemental strand, 25513904 - 25513653
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25513904 ctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttgttagttttgatgttatagaaat 25513805  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25513804 tagggttagatttcattcataatcttttgtataatctatttttctacttctacccataagtgcctatttgtataaagtgattattgtggattaaattggt 25513705  T
Q  243 aaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgt 294  Q
     |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  25513704 gaagtataatgttgttgttgatgaattcacttctgattgatgttgtttttgt 25513653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 42 - 242
Target Start/End: Complemental strand, 26446261 - 26446061
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||| ||||||||  |||||||||| |||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  26446261 cctaaagtaagggtaggactagctttctctaataatgggttgtataattctgaaaaatggtttaatcttgtagttgttgttagttttgatgttatagaaa 26446162  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  26446161 ttagggttagatttcattcataatcttttgtataatatctttttctacttctacccataagtgcctatttgtataaagtgattactgtggatttaattgg 26446062  T
Q  242 t 242  Q
    |    
T  26446061 t 26446061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 43 - 242
Target Start/End: Complemental strand, 14631188 - 14630991
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14631188 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 14631089  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||    
T  14631088 tagggttagatttcgttcataatctttt-tataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggt 14630991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 42 - 242
Target Start/End: Original strand, 2424385 - 2424585
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||||||||||||| ||||| |||| ||||||  | |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  2424385 cctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaaaagggtttaatcttgtagttgttattagttttgatgttatagaaa 2424484  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  2424485 ttagggttcgatttcattcataatcttttgtataatctatttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattgg 2424584  T
Q  242 t 242  Q
    |    
T  2424585 t 2424585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 16296991 - 16296897
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttata 137  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16296991 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacctggtagttgttgttagttttgatgttata 16296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 9639063 - 9638954
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| | | |||    
T  9639063 ctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaaccttgtagttgttgataattttgatgttttgggaat 9638964  T
Q  143 tagggttaga 152  Q
    |||| |||||    
T  9638963 taggtttaga 9638954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 15239815 - 15239927
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaacc-ttgtagttgttgttagttttgatgttatagaaa 141  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||| || ||||||| ||| ||||||| |||||||| |    
T  15239815 ctaaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaaaagggtttaacctttatagttgtcgttggttttgaggttatagaga 15239914  T
Q  142 ttagggttagatt 154  Q
    |||||||||||||    
T  15239915 ttagggttagatt 15239927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 35661002 - 35660906
Alignment:
Q  50 aagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 146  Q
    ||||||| |||||||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||    
T  35661002 aagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttgtagttgttgttagttttgatgttatatgaattagg 35660906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 33186955 - 33186850
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaat 142  Q
    ||||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||  || ||||||||||| ||| |||    
T  33186955 taaggtaggggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtag-aat 33186857  T
Q  143 tagggtt 149  Q
    |||||||    
T  33186856 tagggtt 33186850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 2424706 - 2424775
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  2424706 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgttatgagatgt 2424775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 9622542 - 9622434
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| |||||||||| ||||| | ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  9622542 ctaaggtaagggtgggactagctttctctaataatgggttgtctgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 9622444  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  9622443 attagggtta 9622434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 55583249 - 55583141
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||| | |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  55583249 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattataaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 55583151  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  55583150 attagggtta 55583141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 12424290 - 12424397
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctg--aaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 140  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||||  |||||||||||||| |||||||||||  || ||||||||||| ||| |    
T  12424290 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgttaataggttttgatgttgtag-a 12424388  T
Q  141 attagggtt 149  Q
    |||||||||    
T  12424389 attagggtt 12424397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 26445940 - 26445871
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  26445940 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 26445871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 45314124 - 45314193
Alignment:
Q  86 taattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 154  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  45314124 taattctgaaaaagggtttaacatttgtagttgttgttagttttgatgttatagagattagggttagatt 45314193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 26921550 - 26921619
Alignment:
Q  86 taattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 154  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||    
T  26921550 taattctgaaaaagggtttaacatttgtagttgttgttagttttgatgtcatagagattagggttagatt 26921619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 13847264 - 13847193
Alignment:
Q  33 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggttt 104  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||| ||||||||||||| ||||| |||||    
T  13847264 atcgattaacctaaggtaagggtgagactagctttctctaataatgggttgtataattctaaaaaatggttt 13847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 14477684 - 14477578
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    ||||||||||||||  |||| | || | |||| ||||||  ||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||| |    
T  14477684 ctaaggtaagggtggcactaaccttctttaatcatgagta-tataattctgaaaaagggtttgatcttgtagtcgttgatagttttgatgttatagaagt 14477586  T
Q  143 tagggtta 150  Q
    ||||||||    
T  14477585 tagggtta 14477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 15747904 - 15747973
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||||||| |||||||||| ||| |||||    
T  15747904 aaattggtgaagtataatgttgatgttgatgacttcacttctgattgttgttgtttttgttatgagatgt 15747973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 16025937 - 16025993
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttt 291  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||    
T  16025937 aaattggtgaagtataatgttgttgttgatgaattcacttctaattgttgttgtttt 16025993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 19622093 - 19622179
Alignment:
Q  153 tttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattg 240  Q
    ||||||||||||||||||||||| ||||||||||| |||  | |||||||||  ||||||||||||||||||||| || ||| |||||    
T  19622093 tttcattcataatcttttgtata-tctctttttcttcttaaatccataagtgtttatttgtataaagtgattattatgaatttaattg 19622179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 15747787 - 15747849
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 120  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  15747787 gactaactttctctaaagatgagttgtataattctgaaaaagggtttaacattgtagttgttg 15747849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 14630870 - 14630814
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttt 291  Q
    ||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  14630870 aaatttgtgaagtataatgttgttgttgatgaattcacttctgatcgttgttgtttt 14630814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 17143057 - 17142998
Alignment:
Q  61 tagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 120  Q
    ||||||| |||||  |||||||||||||||||||||| ||||||||| ||||||||||||    
T  17143057 tagctttctctaaagatgagttgtataattctgaaaaggggtttaacattgtagttgttg 17142998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 18463076 - 18462974
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    ||||||||| |||| ||||| | || | |||| ||||||  |||||||||||||||||||||||  |||||||||||  |||||||||||||||| || |    
T  18463076 ctaaggtaaaggtgggactaaccttctttaatcatgagta-tataattctgaaaaagggtttaattttgtagttgttaatagttttgatgttataaaagt 18462978  T
Q  143 tagg 146  Q
    ||||    
T  18462977 tagg 18462974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 10273436 - 10273372
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||| ||||    
T  10273436 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtataac 10273372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 17142942 - 17142876
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| ||||||||||||||||   ||||| ||||||||||||||| |||||||||| ||| |||||    
T  17142942 aaattggtgaagtataatgttgttg---atgaactcacttctgattgttgttgtttttgttatgagatgt 17142876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 19080175 - 19080245
Alignment:
Q  159 tcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtg 230  Q
    ||||||||| |||||||||||||||| ||||||  |||||||||||| || ||||  |||||||||||||||    
T  19080175 tcataatctcttgtataatctctttt-ctacttaaacccataagtgcttaattgtgcaaagtgattattgtg 19080245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 37019723 - 37019670
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||||||||| |||| ||||||  | ||||||||||||||||||    
T  37019723 ctaaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaa 37019670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 12623327 - 12623264
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  12623327 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 12623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 19565959 - 19566022
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  19565959 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 19566022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 46741210 - 46741147
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  46741210 taatcctgaaaaagggtttaaccttgtagttgttaattggttttgatgttgtag-aattagggtt 46741147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 149
Target Start/End: Complemental strand, 16296850 - 16296819
Alignment:
Q  118 ttgttagttttgatgttatagaaattagggtt 149  Q
    ||||||||||||||||||||||||||||||||    
T  16296850 ttgttagttttgatgttatagaaattagggtt 16296819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 20150830 - 20150771
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 150  Q
    ||||||||| ||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  20150830 tgaaaaaggatttaaccttgtagttgttaataggttttgatgttaaagagattagggtta 20150771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 15115275 - 15115222
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  15115275 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15115222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 19739809 - 19739772
Alignment:
Q  25 ggctgccgatcgattatcctaaggtaagggtgtgacta 62  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  19739809 ggctgccaatcgattatcctaaggtaagggtgagacta 19739772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 27996862 - 27996825
Alignment:
Q  25 ggctgccgatcgattatcctaaggtaagggtgtgacta 62  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  27996862 ggctgccaatcgattatcctaaggtaagggtgggacta 27996825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 289
Target Start/End: Original strand, 10237422 - 10237454
Alignment:
Q  257 ttgttgatgaattcacttctgattgttattgtt 289  Q
    ||||||||||||||||||||||||||| |||||    
T  10237422 ttgttgatgaattcacttctgattgttgttgtt 10237454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 11425995 - 11425943
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 11425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 19610376 - 19610324
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  19610376 taaggtaagggtgagactaactttctctaattttaagttgtataattctgaaa 19610324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 25091705 - 25091653
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 25091653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 42875849 - 42875797
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||||| ||||  | ||||||||||||||||||    
T  42875849 taaggtaagggtgggactaactttatataattctaagttgtataattctgaaa 42875797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 53630474 - 53630526
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 53630526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 5e-96; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 28476733 - 28476930
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28476733 ctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 28476832  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  28476833 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattg 28476930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 42 - 242
Target Start/End: Original strand, 24719509 - 24719708
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    |||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24719509 cctatggtaagggtg-gactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaa 24719607  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  24719608 ttaaggttaaatttcattcataatcttttgtataatctttttttctacttctacccataagtgcctatttgtataaagtgactattgtggatttaattgg 24719707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 43 - 204
Target Start/End: Complemental strand, 12710920 - 12710759
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    ||||||||| | || |||||||||| ||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12710920 ctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaaaagggtttaatcttgtagttgttgttagttttgatgttatagaaat 12710821  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtg 204  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12710820 taaggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtg 12710759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 8275962 - 8276097
Alignment:
Q  17 agaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagtt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8275962 agaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaaaagggtttaaccttgtagtt 8276061  T
Q  117 gttgttagttttgatgttatagaaattagggttaga 152  Q
    |||| || |||||||||| | | ||||||| |||||    
T  8276062 gttgatatttttgatgttttgggaattaggtttaga 8276097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 38056671 - 38056780
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||    
T  38056671 ctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttttgggaat 38056770  T
Q  143 tagggttaga 152  Q
    |||| |||||    
T  38056771 taggtttaga 38056780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 50544925 - 50544841
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 127  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50544925 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 50544841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 24007224 - 24007330
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaa 141  Q
    |||||||||||||| |||||||||| ||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |    
T  24007224 ctaaggtaagggtgggactagctttctctgataatga-ttgtataattctgaaaaaaggtttaacctttgtagttgttgttagttttgatgttatagaga 24007322  T
Q  142 ttagggtt 149  Q
    ||||||||    
T  24007323 ttagggtt 24007330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 22145666 - 22145752
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 130  Q
    ||||||||||||| ||||| |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaaccttgtagttgttgttaggtttga 22145752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 34392821 - 34392713
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  34392821 ctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 34392723  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  34392722 attagggtta 34392713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 8306659 - 8306552
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||| ||| |||||||||| |||||||||| ||||||||||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  8306659 ctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaaaggggtttaacatgttgtcgtt-ttgttagttttgatgttatagaa 8306561  T
Q  141 attagggtt 149  Q
    |||||||||    
T  8306560 attagggtt 8306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 39061373 - 39061268
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||| ||| ||||| | || | |||| ||||||  ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |    
T  39061373 ctaaggtaagagtgggactaaccttctgtaatcatgagta-tataattctgaaaaaaggtttaaccttgtagttgttgatagttttgatgttatagaatt 39061275  T
Q  143 tagggtt 149  Q
    |||||||    
T  39061274 tagggtt 39061268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 17901793 - 17901857
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  17901793 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 17901857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 6834229 - 6834150
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 122  Q
    |||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  6834229 ctaaggcaagggtgatactagctttctctaataatgagttgtataattctgaaaaagggtttaacatggttgttgttgtt 6834150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 28477053 - 28477112
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgt 294  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28477053 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgt 28477112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 45499595 - 45499487
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| |||||  ||| |||||||||   |||| ||| ||||||||||| | |||||||||    
T  45499595 ctaaggtaagggtgagactagctttctctaataatgggttgtatgattctataaaggggtttaacatgttgttgtt-ttgttagttttaacgttatagaa 45499497  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  45499496 attagggtta 45499487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 20588690 - 20588581
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa--gggtttaaccttgtagttgtt--gttagttttgatgttataga 139  Q
    ||||||||||||| || ||||||| |||||||||| ||||||| ||||| |||||  ||||||||| | ||  |||||  ||||||||||||||||||||    
T  20588690 taaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacat-gtttttgttttgttagttttgatgttataga 20588592  T
Q  140 aattagggtta 150  Q
    |||||||||||    
T  20588591 aattagggtta 20588581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 20593228 - 20593119
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa--gggtttaaccttgtagttgtt--gttagttttgatgttataga 139  Q
    ||||||||||||| || ||||||| |||||||||| ||||||| ||||| |||||  ||||||||| | ||  |||||  ||||||||||||||||||||    
T  20593228 taaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacat-gtttttgttttgttagttttgatgttataga 20593130  T
Q  140 aattagggtta 150  Q
    |||||||||||    
T  20593129 aattagggtta 20593119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 635003 - 635064
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggttt 104  Q
    |||||||||||||| |||||||||| |||||||||  ||||||||||||| |||||||||||    
T  635003 ctaaggtaagggtgagactagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 35895152 - 35895088
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||| ||||  ||||||||||||||||||||| ||||||| ||||||||||||| ||||||    
T  35895152 ctaaggtatgggtaggactagctttatctaataatgggttgtatgattctgaaaaaggttttaac 35895088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 21188033 - 21188135
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| ||||||  ||||||| ||| ||||| |||||  |||||||||||| ||||||||||||||||||| |    
T  21188033 ctaaggtaagggtgggactaaccttttttaatcatgagta-tataattttgagaaaggatttaattttgtagttgttgatagttttgatgttatagaagt 21188131  T
Q  143 tagg 146  Q
    ||||    
T  21188132 tagg 21188135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 20708058 - 20708163
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | ||| | |||||| |||||||||||||||||| ||||| |||  ||||||| || || |||||||| ||||||    
T  20708058 ctaaggtaagggtgggactaaccttctttaaca-tgagttctataattctgaaaaaggggttaactttgatgttgttgataattgtgatgttaaagaaat 20708156  T
Q  143 tagggtt 149  Q
    |||||||    
T  20708157 tagggtt 20708163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 40390155 - 40390096
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 150  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  40390155 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagatattagggtta 40390096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 14294858 - 14294919
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 152  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  14294858 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 14294919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 41931146 - 41931202
Alignment:
Q  145 gggttagatttcattcataatctt-ttgtataatctctttttctacttctacccataa 201  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  41931146 gggttagttttcattcataatcttcttgtataatctc-ttttctatttctacccataa 41931202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 51131378 - 51131317
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 152  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  51131378 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 51131317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 7703175 - 7703136
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagtt 82  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  7703175 ctaaggtaagggtgggactagctttctctaataatgagtt 7703136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 20822763 - 20822729
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaatt 269  Q
    |||||||| ||||||||||||||||||||||||||    
T  20822763 aaattggtgaagtataatgttgttgttgatgaatt 20822729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 14792604 - 14792637
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgtt 119  Q
    |||| |||||||||||||||||||||||||||||    
T  14792604 taatcctgaaaaagggtttaaccttgtagttgtt 14792637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 21243799 - 21243832
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgtt 119  Q
    |||| |||||||||||||||||||||||||||||    
T  21243799 taatcctgaaaaagggtttaaccttgtagttgtt 21243832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 42913102 - 42913049
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  42913102 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 42913049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 12327742 - 12327806
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||| || ||||||    
T  12327742 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaac 12327806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 19676763 - 19676711
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19676711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 21046049 - 21046101
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 21046101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 38887128 - 38887191
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||| ||||||||||||  || ||||||||||| ||| ||||||||||    
T  38887128 taatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattagggtt 38887191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 51336532 - 51336468
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||| || ||||||    
T  51336532 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaaatggatttaac 51336468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 42 - 242
Target Start/End: Complemental strand, 43745710 - 43745510
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43745710 cctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 43745611  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  43745610 ttagagttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattgg 43745511  T
Q  242 t 242  Q
    |    
T  43745510 t 43745510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 15575648 - 15575839
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||| ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15575648 ctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtacttgttgttagttttgatgttatagaaat 15575747  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggatt 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15575748 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcttatttgtataaagtgattattgtggatt 15575839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 43 - 242
Target Start/End: Complemental strand, 47095505 - 47095306
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  47095505 ctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaaaatggtttaaccttgtagttgttgttaggtttgatgttatagaaat 47095406  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  47095405 tagggttaaatttcattcataatcttttgtataaactctttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggt 47095306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 20252181 - 20252381
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  20252181 ctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttattagttttaatgttatagaaat 20252280  T
Q  143 tagggttagat----ttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaat 238  Q
    |||| ||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  20252281 taggattagatttcattcattcataatcttttgtataatctatttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaat 20252380  T
Q  239 t 239  Q
    |    
T  20252381 t 20252381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 42 - 242
Target Start/End: Original strand, 48212725 - 48212927
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa--gggtttaaccttgtagttgttgttagttttgatgttataga 139  Q
    |||||||||||||||||||||||||| || ||||||  ||||||| ||||| |||||  ||||||||| ||||| |||||||||||||||||||||||||    
T  48212725 cctaaggtaagggtgtgactagctttctccaataataggttgtatgattctaaaaaaaggggtttaacattgtaattgttgttagttttgatgttataga 48212824  T
Q  140 aattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaatt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||    
T  48212825 aattagggttagatttcattcataatcttttgtataatctctttttctacttctacccaaaagtgtctatttgtataaagtgattattgtggatttaatt 48212924  T
Q  240 ggt 242  Q
    |||    
T  48212925 ggt 48212927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 18874664 - 18874859
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa--gggtttaaccttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||| |   ||||||||||||||||||    
T  18874664 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaaaggggtttaaccttgtagttggt---agttttgatgttatagaa 18874760  T
Q  141 attagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattg 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  18874761 attagggttagatttcattcataatcttttgtataatctcttttt---cttctacccataagtgcctatttgtataaagtgattattgtggatttaattg 18874857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 42 - 234
Target Start/End: Original strand, 4690661 - 4690851
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    |||||||||| |||| ||||| |||| ||||||  | ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  4690661 cctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattacttttgatgttatagaaa 4690760  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggatt 234  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||||||||||||||| ||||||    
T  4690761 ttagggttagatttcattcataatcttttgtataatctcattttctacttctacccataagt--ctatttgtataaagtgattattatggatt 4690851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 81 - 201
Target Start/End: Complemental strand, 16186928 - 16186808
Alignment:
Q  81 ttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctc 180  Q
    |||||||||||||||||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16186928 ttgtataattctgaaaaagggtttaaccttatggttgttagtagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctc 16186829  T
Q  181 tttttctacttctacccataa 201  Q
    ||||||| |||||||||||||    
T  16186828 tttttcttcttctacccataa 16186808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 19195664 - 19195562
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  19195664 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaa-gggtttaaccttgtagttgttgttagttttgatgttataggaat 19195566  T
Q  143 tagg 146  Q
    ||||    
T  19195565 tagg 19195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 708428 - 708537
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||| ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  708428 ctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgctgttagttttgatgttataggaat 708527  T
Q  143 tagggttaga 152  Q
    |||| |||||    
T  708528 taggtttaga 708537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 8513740 - 8513828
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt 119  Q
    |||||||||| ||||||||||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  8513740 cgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgtt 8513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 8488081 - 8488169
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt 119  Q
    |||||||||| ||||||||||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  8488081 cgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttatagttgtt 8488169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 58412 - 58517
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||| | ||| ||| |||||||||||||||||| ||||||    
T  58412 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttaaagaaat 58509  T
Q  143 tagggtta 150  Q
    ||||||||    
T  58510 tagggtta 58517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 15700734 - 15700840
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    ||||||||||| ||  ||||||||| |||||||||| |||||||  |||| |||| ||||||||| | |||||||||||||||||| |||||||||||||    
T  15700734 ctaaggtaaggatgatactagctttctctaataatgggttgtatggttctaaaaaggggtttaacat-gtagttgttgttagttttaatgttatagaaat 15700832  T
Q  143 tagggtta 150  Q
    ||||||||    
T  15700833 tagggtta 15700840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 4690980 - 4691049
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  4690980 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 4691049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 43745389 - 43745320
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  43745389 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 43745320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 25943319 - 25943213
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgt-tagttttgatgttatagaaat 142  Q
    ||||||||||||| |||||||||| |||||||||| |||||||  || |||||| ||||||||| || | |||||| | |||||||||||||||||||||    
T  25943319 taaggtaagggtgggactagctttctctaataatgggttgtatgtttttgaaaaggggtttaacatt-tcgttgttttgtagttttgatgttatagaaat 25943221  T
Q  143 tagggtta 150  Q
    ||||||||    
T  25943220 tagggtta 25943213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 38299801 - 38299738
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaa 106  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  38299801 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 8930764 - 8930872
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||  ||| |||||||||| ||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  8930764 ctaaggtaagggtgggactacatttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 8930862  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  8930863 attagggtta 8930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 43276744 - 43276848
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaat 142  Q
    ||||||||||||| ||||| |||| |||||||||| |||||||||||||| |||| ||||||||||||||||||||  || ||||||||||| ||| |||    
T  43276744 taaggtaagggtgggactaactttctctaataatgggttgtataattctg-aaaatggtttaaccttgtagttgttaataggttttgatgttgtag-aat 43276841  T
Q  143 tagggtt 149  Q
    |||||||    
T  43276842 tagggtt 43276848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 831981 - 832050
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  831981 aaatgggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 832050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 1197161 - 1197230
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  1197161 aaatgggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 1197230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 34958265 - 34958196
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||    
T  34958265 aaattggtgaagtataatgttgttgttgatgaattcacttttgattgttgttgtttttgttatgagatgt 34958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 16250221 - 16250285
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||| ||||||||||||||||    
T  16250221 ctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaac 16250285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 13744509 - 13744614
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| ||| ||| ||||| |||| |||||||| | ||| ||| |||||| |||| |||||||||||||    
T  13744509 ctaaggtaagggtgggactagctttctctaataatgggttttatgattctaaaaaggggtttaa-catgttgtt-ttgttatttttaatgttatagaaat 13744606  T
Q  143 tagggtta 150  Q
    ||||||||    
T  13744607 tagggtta 13744614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 47095185 - 47095126
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgt 294  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  47095185 aaattggtgaagtataatgttgttgttgatgaattcacttctaattgttgttgtttttgt 47095126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 33556104 - 33556211
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaa 140  Q
    ||||| |||||||| |||||||||| |||||||||| ||||||| ||||| |||| ||||||||| | || ||||||  |||||||| ||||||||||||    
T  33556104 ctaagataagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttt-gatgttatagaa 33556201  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  33556202 attagggtta 33556211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 15720831 - 15720724
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaa 141  Q
    |||||||| |||| |||||||||| ||| |||||| ||||||| ||||| |||| ||||||||| | || ||||||  ||||||||||||||||||||||    
T  15720831 taaggtaaaggtgggactagctttctctcataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaa 15720733  T
Q  142 ttagggtta 150  Q
    ||| |||||    
T  15720732 ttatggtta 15720724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 48213032 - 48213101
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||| |||||||||| ||| |||||    
T  48213032 aaattgatgaagtataatgttgttgttgatgaattcacttctaattgttgttgtttttgttatgagatgt 48213101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 18570700 - 18570592
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| |||||||||| ||||||  |||||  ||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  18570700 ctaaggtaagggtgagactagctttctctaataatgggttgtaagattctagaaaggggtttaacatattgttgtt-ttgttagttttgatgttatagaa 18570602  T
Q  141 attagggtta 150  Q
     ||| |||||    
T  18570601 gttatggtta 18570592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 34958383 - 34958321
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 120  Q
    |||||||||| |||||  ||||||||||||||||||||||||| |||||| ||||||||||||    
T  34958383 gactagctttctctaaagatgagttgtataattctgaaaaaggatttaacattgtagttgttg 34958321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 42565872 - 42565934
Alignment:
Q  84 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 146  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||| |||||||||| |||||    
T  42565872 tataattctgaaaaagggtttaatcttgtagttgttgataattttgttgttatagaagttagg 42565934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 13315081 - 13315145
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| ||||| |||| |||||||||| ||||||| |||||||||| |||||||||    
T  13315081 ctaaggtaagggtgagactatctttctctaataatgggttgtatgattctgaaaaggggtttaac 13315145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 16368271 - 16368354
Alignment:
Q  144 agggttagatttcattcataatctt-ttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattatt 227  Q
    |||||||| |||||||||||||||| ||||||||||| |||| |||||||||||||||||||| || ||||  ||| ||||||||    
T  16368271 agggttagttttcattcataatcttcttgtataatctatttt-ctacttctacccataagtgcttaattgtgcaaattgattatt 16368354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 3287797 - 3287743
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 97  Q
    |||||||||||||| |||||||||| |||||||||  ||||||||||||||||||    
T  3287797 ctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaaa 3287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 18079617 - 18079671
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtt 289  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||| |||||    
T  18079617 aaattggtgaaatataatgttattgttgatgaattcacttctgattgttgttgtt 18079671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 19283108 - 19283051
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaaggg 101  Q
    ||||||||||||| ||||| |||| ||||| |||| ||||||||||||||||||||||    
T  19283108 taaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaaaaggg 19283051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 15700887 - 15700951
Alignment:
Q  48 gtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgt 112  Q
    ||||||| | |||||||||| |||||||||||||||||| ||||| |||| ||||||||| ||||    
T  15700887 gtaagggggagactagctttctctaataatgagttgtatgattctaaaaaggggtttaacattgt 15700951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 16496215 - 16496154
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 152  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  16496215 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 16496154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 47974807 - 47974872
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||    
T  47974807 cgatcgattaacctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaa 47974872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 9743120 - 9743183
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||||||||||||  | |||||||||||| ||| ||||||||||    
T  9743120 taatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtag-aattagggtt 9743183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 33060491 - 33060389
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| ||||||  |||||||||| ||||||||||||  |||| ||||||  || ||||||||| |||||| |    
T  33060491 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattctggaaaagggtttaattttgttgttgtttataattttgatgtaatagaagt 33060393  T
Q  143 tagg 146  Q
    ||||    
T  33060392 tagg 33060389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 831864 - 831926
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 120  Q
    |||||| ||| |||||  ||| |||||| |||||| |||||||||||||| ||||||||||||    
T  831864 gactagttttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgttg 831926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 1197044 - 1197106
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 120  Q
    |||||| ||| |||||  ||| |||||| |||||| |||||||||||||| ||||||||||||    
T  1197044 gactagttttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgttg 1197106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 15119354 - 15119411
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgttag-ttttgatgttatagaaattagggtt 149  Q
    ||||||||||||||||||||||||||||  ||| |||||||||| ||| ||||||||||    
T  15119354 tgaaaaagggtttaaccttgtagttgttaatagattttgatgttgtag-aattagggtt 15119411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 20214209 - 20214147
Alignment:
Q  34 tcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||  |||||||||||||| ||||| |||| || |||  ||||||||||||||||||||    
T  20214209 tcgattaatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaa 20214147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 21661309 - 21661204
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | ||||| |||||| ||||||||||||||||||  |||| |||  ||||||| || || |||||||  |||| |    
T  21661309 ctaaggtaagggtgggactaaccttctttaata-tgagttatataattctgaaaaaggggctaactttgatgttgttgataattgtgatgtttaagaagt 21661211  T
Q  143 tagggtt 149  Q
    |||||||    
T  21661210 tagggtt 21661204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 12127162 - 12127215
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  12127162 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12127215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 14180397 - 14180450
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||||||||||  ||| ||||||  | ||||||||||||||||||    
T  14180397 ctaaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaa 14180450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 20586405 - 20586352
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  20586405 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 20586352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 8851159 - 8851211
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  8851159 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 8851211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 11067520 - 11067468
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  11067520 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 11067468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 12372326 - 12372274
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  12372326 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12372274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 12465260 - 12465312
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12465312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 14160897 - 14160960
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| ||||||| |||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  14160897 taatcctgaaaaggggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 14160960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 14318083 - 14318020
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| ||||||||||||||||||||| |||||||  || ||||||||||| ||| ||||||||||    
T  14318083 taatcctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgtag-aattagggtt 14318020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 32433589 - 32433641
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  32433589 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 32433641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 35771430 - 35771494
Alignment:
Q  33 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 97  Q
    |||||||| ||||||||||||||| ||||| |||| ||||||  | |||  ||||||||||||||    
T  35771430 atcgattaacctaaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaa 35771494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 8e-92; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 44 - 242
Target Start/End: Complemental strand, 21514743 - 21514545
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 143  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21514743 taaggtaagggtgggactagatttctctaataatgagttgtataattcttaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 21514644  T
Q  144 agggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  21514643 agggttagatttcattcataatcttttgtataatctctttttatacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggt 21514545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 44 - 242
Target Start/End: Original strand, 18816295 - 18816493
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 143  Q
    ||||||||||||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18816295 taaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 18816394  T
Q  144 agggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||||    
T  18816395 agggttagatttcattcataatcttttgtataatctctttttctacttctactcataagtgtctatttgtataaagtgattattgtggatttaattggt 18816493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 42 - 242
Target Start/End: Original strand, 4380615 - 4380807
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||||||||||||| ||||| |||| ||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4380615 cctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 4380714  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||         || |||||||||||||||||||||||| ||| ||||||    
T  4380715 ttagggttagatttcattcataatcttttgtataatctctttttctacttcta--------agcctatttgtataaagtgattattgtgaatttaattgg 4380806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 36732410 - 36732514
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  36732410 cctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagtttaaccttgtagttgttgttagttttgatgttataggaa 36732509  T
Q  142 ttagg 146  Q
    |||||    
T  36732510 ttagg 36732514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 12577932 - 12577826
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttg-tagttgttgttagttttgatgttatagaaa 141  Q
    |||||||||||||| ||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |    
T  12577932 ctaaggtaagggtgggactaactttctctaataat-agttgtataattccgaaaaagggtttaacctttatagttgttgttagttttgatgttatagaga 12577834  T
Q  142 ttagggtt 149  Q
    ||||||||    
T  12577833 ttagggtt 12577826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 22208322 - 22208216
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaa 141  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  || ||||||||||| ||| ||    
T  22208322 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aa 22208224  T
Q  142 ttagggtt 149  Q
    ||||||||    
T  22208223 ttagggtt 22208216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 22258306 - 22258403
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 140  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||  |||||||||||||||||| |||||||| || ||||||||||| |||||    
T  22258306 taaggtaagggtgagactagctttctctaataatgagttgtataattccaaaaaagggtttaaccttgcagttgttgataggttttgatgttgtagaa 22258403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 21399770 - 21399662
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  21399770 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 21399672  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  21399671 attagggtta 21399662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 21676592 - 21676704
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||| ||||| |||||||||| |||||||||||| |||||||||| ||||||||||    
T  21676592 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagaaat 21676689  T
Q  143 tagggttagatttca 157  Q
    |||| ||| ||||||    
T  21676690 taggtttaaatttca 21676704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 21794263 - 21794155
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  21794263 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 21794165  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  21794164 attagggtta 21794155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 18023653 - 18023722
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  18023653 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgttatgagatgt 18023722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 38185044 - 38185113
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  38185044 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 38185113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 22610266 - 22610371
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| |||| |||||||||||||||||| ||||| |||| ||||||||| |  ||  | |||||||||||||||||||||||||    
T  22610266 ctaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgtta--ttttgttagttttgatgttatagaaat 22610363  T
Q  143 tagggtta 150  Q
    || |||||    
T  22610364 tatggtta 22610371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 21678845 - 21678946
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||| ||||| |||||||||| |||||||||||| |||||||||| |||||| |||    
T  21678845 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagcaat 21678942  T
Q  143 tagg 146  Q
    ||||    
T  21678943 tagg 21678946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 18834474 - 18834371
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 143  Q
    ||||||||||||| |||||||||| ||||||||||  |||||| ||||| |||| ||||||||| | || ||| ||||||||||||||||||||||||||    
T  18834474 taaggtaagggtgggactagctttctctaataatggattgtatgattct-aaaaggggtttaacat-gttgtt-ttgttagttttgatgttatagaaatt 18834378  T
Q  144 agggtta 150  Q
    |||||||    
T  18834377 agggtta 18834371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 20494632 - 20494701
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  20494632 aaattggtgaagtataatattgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 20494701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 22483834 - 22483775
Alignment:
Q  48 gtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 22483775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 21514424 - 21514367
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgttttt 292  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  21514424 aaattggtgaagtataatgttgttgttgatgaatttacttctgattgttgttgttttt 21514367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 21676499 - 21676585
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgat 131  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||| ||||| |||||||||| |||||||||||| ||||||||||    
T  21676499 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgat 21676585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 18023570 - 18023632
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 120  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||||    
T  18023570 gactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 18023632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 22345217 - 22345153
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| |||| ||||| |||||||||    
T  22345217 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaac 22345153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 22356877 - 22356813
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| |||| ||||| |||||||||    
T  22356877 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaac 22356813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 22483976 - 22483912
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 122  Q
    ||||| |||| |||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  22483976 gactaactttctctaataatgagttgtataattcttaaaaagggtttaacatggttgttgttgtt 22483912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 23884222 - 23884116
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaa 140  Q
    |||||||||||| | |||||||||| |||||  ||| ||||||| ||||| |||| ||||||||| | || ||| ||  |||||||||||||||||||||    
T  23884222 ctaaggtaagggcgggactagctttctctaa--atgggttgtatgattctaaaaaggggtttaacat-gttgttcttttgttagttttgatgttatagaa 23884126  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  23884125 attagggtta 23884116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 38184926 - 38184984
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagtt 116  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| ||||||||    
T  38184926 gactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagtt 38184984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 36306050 - 36305988
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaa 106  Q
    |||||||||||||| |||||||||| |||||||| | ||||||| ||||||||||||| |||||    
T  36306050 ctaaggtaagggtgagactagctttctctaataacg-gttgtatgattctgaaaaaggttttaa 36305988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 21579206 - 21579310
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaat 142  Q
    ||||||||||||||||||| | || | |||| || |||  | |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| |||    
T  21579206 taaggtaagggtgtgactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaaccttgtagttgttaatatgttttgatgttgtag-aat 21579303  T
Q  143 tagggtt 149  Q
    |||||||    
T  21579304 tagggtt 21579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 17906836 - 17906901
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||    
T  17906836 cgatcgattaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 17906901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 22366123 - 22366072
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtt 289  Q
    |||||||| ||||||||||||||||   ||||||||||||||||||||| |||||    
T  22366123 aaattggtgaagtataatgttgttg---atgaattcacttctgattgttgttgtt 22366072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 22474767 - 22474704
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  22474767 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 22474704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 12037205 - 12037260
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatgttatagaa 140  Q
    |||| |||||||||||||||||||||||||||||  ||| |||||||||| |||||    
T  12037205 taatcctgaaaaagggtttaaccttgtagttgttaatagcttttgatgttgtagaa 12037260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 22966815 - 22966756
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 150  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||  ||||||||||    
T  22966815 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagcgattagggtta 22966756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 29762909 - 29762964
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaa 140  Q
    |||| |||||||||||||||||||||||||||||  | |||||||||||| |||||    
T  29762909 taatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaa 29762964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 39694266 - 39694329
Alignment:
Q  33 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||| || ||||| ||||||| |||||||||||| |||||| || |||||||| |||||||||    
T  39694266 atcgactaacctaatgtaagggcgtgactagctttctctaattataagttgtatgattctgaaa 39694329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 22708323 - 22708428
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| ||||||| ||||||||| ||||||||  |||| |||  ||||||| || || |||||||| |||| |    
T  22708323 ctaaggtaagggtgggactaaccttctttaat-atgagttctataattctaaaaaaggggctaactttgatgttgttgataattgtgatgttaaagaagt 22708421  T
Q  143 tagggtt 149  Q
    |||||||    
T  22708422 tagggtt 22708428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 22723305 - 22723251
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtt 289  Q
    |||||| | ||||||  |||| ||||||||||||||||||||||||||| |||||    
T  22723305 aaattgatgaagtattttgttattgttgatgaattcacttctgattgtttttgtt 22723251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 21697509 - 21697566
Alignment:
Q  94 aaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 150  Q
    |||||||||||||| |||||||||||  || |||||||||||| ||| ||||||||||    
T  21697509 aaaaagggtttaacattgtagttgttaataggttttgatgttaaagagattagggtta 21697566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 17978457 - 17978520
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||| ||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  17978457 taatcctgaaaaaggatttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 17978520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 20083638 - 20083690
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 20083690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 41680174 - 41680237
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||| ||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  41680174 taatcctgataaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 41680237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 42 - 242
Target Start/End: Complemental strand, 18329 - 18129
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  18329 cctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttggttttgattttatagaaa 18230  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  18229 ttagggttagatttcattcataatcttctgtataatctctttttctacttctacccataagtgcttatttgtataaaatgattattgtggatttaattgg 18130  T
Q  242 t 242  Q
    |    
T  18129 t 18129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 3421 - 3620
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3421 ctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 3520  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  3521 tagggttatatttcattcataatcttttgtataatctctttttctacttctacccataagtgcttatttgtataaagtgattattgaggatttaattggt 3620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 3741 - 3810
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||    
T  3741 aaattggtgaactataatgttgttgttgatgaattcacttctgattgttgttatttttgttatgagatgt 3810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 1e-87; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 43 - 242
Target Start/End: Complemental strand, 17208577 - 17208378
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17208577 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttatagaaat 17208478  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||  |||||||||||||||||||||||||||| |||||||    
T  17208477 tagggttagatttcattcataatcttttgtataatctctttttcttcttctattcataagtgtctatttgtataaagtgattattgtggatttaattggt 17208378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 43 - 242
Target Start/End: Complemental strand, 14520499 - 14520300
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| | |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  14520499 ctaaggtaagggtgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaaccttgtagttgttgttagttttgatgttataaaaat 14520400  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  14520399 tagggttaaatttcactcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggt 14520300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 42 - 242
Target Start/End: Complemental strand, 24547254 - 24547054
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttataga 139  Q
    |||||||||||| || ||||| |||| |||||||||| ||||||| ||||| |||| | ||||||| | || ||||||  |||||||| |||||||||||    
T  24547254 cctaaggtaaggatgagactatctttctctaataatgggttgtatgattctaaaaaggagtttaacat-gttgttgttttgttagttt-gatgttataga 24547157  T
Q  140 aattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaatt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  24547156 aattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaatt 24547057  T
Q  240 ggt 242  Q
    |||    
T  24547056 ggt 24547054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 42 - 242
Target Start/End: Original strand, 24548952 - 24549149
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||| ||||||||| ||||| ||||||||||||||| ||||||| ||||| |||| ||||||||  | || ||| |||||||||| |||||||||||||    
T  24548952 cctaaagtaagggtgagactaactttatctaataatgggttgtatgattctaaaaaggggtttaatat-gttgtt-ttgttagttt-gatgttatagaaa 24549048  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||    
T  24549049 ttagggttagatttcattcataatattttgtacaatctctttttctacttctacccataagtgcctatttgcataaagtaattattgtggatttaattgg 24549148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 29907692 - 29907582
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaa 141  Q
    |||||||||||||| |||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  29907692 ctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaa 29907593  T
Q  142 ttagggttaga 152  Q
    |||||||||||    
T  29907592 ttagggttaga 29907582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 29948858 - 29948748
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaa 141  Q
    |||||||||||||| |||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  29948858 ctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaa 29948759  T
Q  142 ttagggttaga 152  Q
    |||||||||||    
T  29948758 ttagggttaga 29948748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 29998012 - 29997902
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaa 141  Q
    |||||||||||||| |||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  29998012 ctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaa 29997913  T
Q  142 ttagggttaga 152  Q
    |||||||||||    
T  29997912 ttagggttaga 29997902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 14152386 - 14152504
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt-gttagttttg 129  Q
    ||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||    
T  14152386 cgatccattaacctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaaccttgtagttgttagtaggttttg 14152485  T
Q  130 atgttatagaaattagggtt 149  Q
    ||||| ||| ||||||||||    
T  14152486 atgttgtag-aattagggtt 14152504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 14641547 - 14641656
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| || ||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| | | |||    
T  14641547 ctaaggtaagggtgggattagctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagtattgatgttttgggaat 14641646  T
Q  143 tagggttaga 152  Q
    |||| |||||    
T  14641647 taggtttaga 14641656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 22841278 - 22841390
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac---cttgtagttg--ttgttagttttgatgttata 137  Q
    |||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    |||| ||||  ||||||||||||| ||||||    
T  22841278 ctaatgtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatgattgttgttgttttgttagttttgaggttata 22841377  T
Q  138 gaaattagggtta 150  Q
    |||||||||||||    
T  22841378 gaaattagggtta 22841390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 5215699 - 5215594
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaat 142  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||  || ||||||||||| ||| |||    
T  5215699 taaggtaagggtggcactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttattaataggttttgatgttgtag-aat 5215601  T
Q  143 tagggtt 149  Q
    |||||||    
T  5215600 tagggtt 5215594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 54875474 - 54875581
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||   |||| ||| ||||||||||||||||||||||||    
T  54875474 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaaa 54875572  T
Q  142 ttagggtta 150  Q
    |||||||||    
T  54875573 ttagggtta 54875581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 17684824 - 17684942
Alignment:
Q  33 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttga 130  Q
    ||||||| || ||||||||||||| |||||| ||| | |||||||| ||||||| ||||| |||| |||||||||  ||||| ||| |||||||||||||    
T  17684824 atcgattttcttaaggtaagggtgggactagttttctgtaataatgggttgtatgattctaaaaaggggtttaacatcttgttgtt-ttgttagttttga 17684922  T
Q  131 tgttatagaaattagggtta 150  Q
    ||||||||||||||||||||    
T  17684923 tgttatagaaattagggtta 17684942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 3527156 - 3527261
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||| | |||| |||||||| | ||| ||| |||||||||||||||||||||||||    
T  3527156 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattttaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 3527253  T
Q  143 tagggtta 150  Q
    ||||||||    
T  3527254 tagggtta 3527261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 2841505 - 2841613
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||  ||||||||   |||| ||| |||||||||||||||||||||||    
T  2841505 ctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaagaggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 2841603  T
Q  141 attagggtta 150  Q
    ||||| ||||    
T  2841604 attagagtta 2841613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 6156763 - 6156656
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  6156763 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattct-aaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 6156666  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  6156665 attagggtta 6156656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 6159458 - 6159350
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||| ||||| |||||||||| ||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  6159458 ctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 6159360  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  6159359 attagggtta 6159350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 2247998 - 2248067
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  2247998 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 2248067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 17669687 - 17669805
Alignment:
Q  33 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttga 130  Q
    ||||||| || |||||||| | || |||||||||| |||||||||| ||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||    
T  17669687 atcgattttcttaaggtaatgatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttga 17669785  T
Q  131 tgttatagaaattagggtta 150  Q
    ||||||||||||||||||||    
T  17669786 tgttatagaaattagggtta 17669805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 50350815 - 50350928
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa--gggtttaacctt-gtagttgttgttagttttgatgttataga 139  Q
    |||||||||||||| ||||| | || | |||| ||||||  |||||||||||||||  |||||||||||| |||||| ||||||||||||||||||||||    
T  50350815 ctaaggtaagggtgggactaaccttctttaatcatgagta-tataattctgaaaaaaggggtttaacctttgtagtttttgttagttttgatgttataga 50350913  T
Q  140 aattagggttagatt 154  Q
     ||||||||||||||    
T  50350914 gattagggttagatt 50350928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 14442228 - 14442120
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| | |||||||| ||||||| ||||| ||||  |||||||| | || ||||||  |||||||||||||||||||||    
T  14442228 ctaaggtaagggtgggactagctttctgtaataatgggttgtatgattctaaaaagcggtttaacat-gttgttgttttgttagttttgatgttatagaa 14442130  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  14442129 attagggtta 14442120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 24546933 - 24546876
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgttttt 292  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24546933 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgttttt 24546876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 15566797 - 15566721
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt 119  Q
    |||| ||||||||| ||||| |||| ||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  15566797 ctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgtt 15566721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 21845651 - 21845762
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| || |||  |||| |||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  21845651 ctaaggtaagggtgggactaaccttctttaatcataagta-tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaaat 21845749  T
Q  143 tagggttagattt 155  Q
    |||| || |||||    
T  21845750 taggttttgattt 21845762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 3160626 - 3160728
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| ||||||  ||||||||| |||| ||||||||| |||||||||||| |||||||||| ||||||||||    
T  3160626 ctaaggtaagggtgagactaaccttctttaatcatgagta-tataattctaaaaatgggtttaactttgtagttgttgatagttttgatattatagaaat 3160724  T
Q  143 tagg 146  Q
    ||||    
T  3160725 tagg 3160728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 45803338 - 45803409
Alignment:
Q  51 agggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 122  Q
    |||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| | || |||||||||    
T  45803338 agggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatcgttgttgttgtt 45803409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 24549270 - 24549325
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgttt 290  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  24549270 aaattggtgaagtataatgttgttgttgatgaattcacttcttattgttgttgttt 24549325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 2247880 - 2247942
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 120  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||||    
T  2247880 gactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 2247942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 48631344 - 48631278
Alignment:
Q  84 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 150  Q
    |||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||| | |||||||    
T  48631344 tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaagtcagggtta 48631278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 12917305 - 12917384
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 122  Q
    ||||| |||||||| ||||| |||| |||||||||| ||||||| ||||| |||||||||||||| | || |||||||||    
T  12917305 ctaagataagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaacatggttgttgttgtt 12917384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 6003238 - 6003133
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | ||||| |||||| ||||||||||||||||||  |||| |||  ||||||| || || |||||||| ||||||    
T  6003238 ctaaggtaagggtgggactaaccttctttaata-tgagttctataattctgaaaaaggggctaactttgatgttgttgataattgtgatgttaaagaaat 6003140  T
Q  143 tagggtt 149  Q
    |||||||    
T  6003139 tagggtt 6003133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 25104106 - 25104148
Alignment:
Q  247 tataatgttgttgttgatgaattcacttctgattgttattgtt 289  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  25104106 tataatgttgttgttgatgaattcacttatgattgttattgtt 25104148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 50755268 - 50755360
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttg--ttgttagttttgatgttatagaaattagggtt 149  Q
    ||||| |||| ||||||||||  |||||| ||||| |||| ||||||||| | || ||||  ||||||||||||||||||||||||||||||||    
T  50755268 gactaactttctctaataatggattgtatgattctaaaaaggggtttaacat-gttgttgctttgttagttttgatgttatagaaattagggtt 50755360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 13520449 - 13520408
Alignment:
Q  105 aaccttgtagttgttgttagttttgatgttatagaaattagg 146  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  13520449 aaccttgtagttgttgttagttttgatgttataggaattagg 13520408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 16050992 - 16050916
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||  |||||||||    
T  16050992 cgatcgattaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaac 16050916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 17539158 - 17539106
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  17539158 taaggtaagggtgagactaactttatctaattctaagttgtataattctgaaa 17539106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 53646100 - 53646163
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  53646100 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 53646163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 54330348 - 54330411
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  54330348 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 54330411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 25202187 - 25202075
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatg-ttatagaa 140  Q
    |||||||||||||| ||||||| ||  ||||||||| ||| ||||| ||||||| |||||||||| | || ||||||||| | |||||||| ||| ||||    
T  25202187 ctaaggtaagggtgggactagc-ttcgctaataatgggtt-tataaatctgaaatagggtttaacatggttgttgttgtttgattttgatgattagagaa 25202090  T
Q  141 attagggttagattt 155  Q
    |||||| || |||||    
T  25202089 attaggttttgattt 25202075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 33565140 - 33565086
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 97  Q
    |||||||||||||||||||| |||| ||||||  | ||| |||||||||||||||    
T  33565140 ctaaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaa 33565086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 12155089 - 12155130
Alignment:
Q  109 ttgtagttgttgttagttttgatgttatagaaattagggtta 150  Q
    |||||||||||  ||||||||||||||||||| |||||||||    
T  12155089 ttgtagttgttaatagttttgatgttatagaagttagggtta 12155130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 24177735 - 24177788
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||| | |||| |||||| || ||||||||||||||||||    
T  24177735 ctaaggtaagggtgggacaaactttctctaattataagttgtataattctgaaa 24177788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 40808049 - 40807996
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  40808049 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40807996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 44274471 - 44274418
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  44274471 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 44274418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 11259483 - 11259431
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  11259483 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 11259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 12150993 - 12151053
Alignment:
Q  90 tctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 150  Q
    |||||||| || ||||  |||||| |||||  ||||||||||||||||||| |||||||||    
T  12150993 tctgaaaagggatttaggcttgtatttgttaatagttttgatgttatagaagttagggtta 12151053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 13522353 - 13522385
Alignment:
Q  118 ttgttagttttgatgttatagaaattagggtta 150  Q
    |||||| ||||||||||||||||||||||||||    
T  13522353 ttgttaattttgatgttatagaaattagggtta 13522385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 17045018 - 17044966
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 17047178 - 17047126
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17047126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 17541486 - 17541434
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17541434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 22306583 - 22306635
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  22306583 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 22306635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 21315475 - 21315674
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21315475 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 21315574  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  21315575 tattgttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggt 21315674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 21335265 - 21335464
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21335265 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 21335364  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||    
T  21335365 tatggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgtctatttgtataaagtgattattgtagatttaattggt 21335464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 43 - 242
Target Start/End: Complemental strand, 21369346 - 21369147
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||| |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  21369346 ctaaggtaagggtgggacaagctttctctaacaatgggttgtataattctgaaaaagggtttaaccttgtagtttatattagttttgatgttatagaaat 21369247  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||| |||||||    
T  21369246 tagggttagatttcattcataatcttttgtataatctctttttctactactacccataaatgtctatttgtataaagtgattattgtggatttaattggt 21369147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 42 - 242
Target Start/End: Complemental strand, 23610680 - 23610474
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  23610680 cctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttctagttgttgtttgttttgatgttatagaaa 23610581  T
Q  142 ttagggttagatttcattcataatcttttgtataa------tctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggatta 235  Q
    |||||||||||||| ||||||||||||||||||||      | | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||     
T  23610580 ttagggttagatttaattcataatcttttgtataaagtgattatgtttttctacttctacccataagtgcctatttgtataaagtgattattgtgaattt 23610481  T
Q  236 aattggt 242  Q
    |||||||    
T  23610480 aattggt 23610474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 28652593 - 28652662
Alignment:
Q  86 taattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 154  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28652593 taattctgaaaaagggtttagcctttgtagttgttgttagttttgatgttatagaaattagggttagatt 28652662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 149500 - 149610
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa---gggtttaac--cttgtagttgttgttagttttgatgttata 137  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||| |||||   |||||||||   |||| ||| ||||||||||||||||||||    
T  149500 ctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaaaaaaggggtttaacatgttgtcgtt-ttgttagttttgatgttata 149598  T
Q  138 gaaattagggtt 149  Q
    ||||||||||||    
T  149599 gaaattagggtt 149610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 28344987 - 28345092
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    ||||| ||||||||||||||||||| |||||||||| | ||||| ||||| |||| |||||||| | ||| ||| |||||||||| ||||||||||||||    
T  28344987 ctaagataagggtgtgactagctttctctaataatgggctgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagtttcgatgttatagaaat 28345084  T
Q  143 tagggtta 150  Q
    ||||||||    
T  28345085 tagggtta 28345092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 25584302 - 25584367
Alignment:
Q  84 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 149  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||||||||    
T  25584302 tataattctgaaaaagggtttaaccttgtcgttgatgatagttttgatgttatagaagttagggtt 25584367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 34491239 - 34491350
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaa-taatgagttgtataattctgaaaaagggtttaaccttgtagttgttgt----tagttttgatgttata 137  Q
    |||||||||||||| |||||||||  ||||| ||| |||||||||||||||||||||||||||||| | || ||||||||    ||||||||||||||||    
T  34491239 ctaaggtaagggtgggactagcttc-tctaaataacgagttgtataattctgaaaaagggtttaacatggttgttgttgttttgtagttttgatgttata 34491337  T
Q  138 gaaattagggtta 150  Q
     || |||||||||    
T  34491338 aaatttagggtta 34491350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 20005970 - 20006072
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||||| || | |||| ||||||  |||||||||||||||||||||||  |||| ||||||  || |||||||||||||||| |    
T  20005970 ctaaggtaagggtgggactagccttctttaatcatgagtc-tataattctgaaaaagggtttaattttgttgttgttaataattttgatgttatagaagt 20006068  T
Q  143 tagg 146  Q
    ||||    
T  20006069 tagg 20006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 19647246 - 19647180
Alignment:
Q  84 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 150  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||  ||||||| |||||||||    
T  19647246 tataattctgaaaaagggtttaatcttgtagttgttaatagttttgattgtatagaagttagggtta 19647180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 23801549 - 23801485
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  23801549 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 23801485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 45535978 - 45535876
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| | ||||  ||||||||||||||||||||||| ||||| ||||||| || || || |||||||||| |    
T  45535978 ctaaggtaagggtgggactaaccttctttaatcacgagtc-tataattctgaaaaagggtttaatcttgttgttgttgataattctgttgttatagaagt 45535880  T
Q  143 tagg 146  Q
    ||||    
T  45535879 tagg 45535876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 25584186 - 25584218
Alignment:
Q  118 ttgttagttttgatgttatagaaattagggtta 150  Q
    |||||||||||||||||||||||||||||||||    
T  25584186 ttgttagttttgatgttatagaaattagggtta 25584218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 17307539 - 17307486
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  17307539 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 24516239 - 24516186
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  24516239 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24516186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 40912373 - 40912320
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  40912373 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40912320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 5031129 - 5031181
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 5031181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 24780840 - 24780892
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 5e-87; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 44 - 242
Target Start/End: Original strand, 23199207 - 23199405
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 143  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  23199207 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatggtttaaccttgtagttgttagtagttttgatgttatagaaatt 23199306  T
Q  144 agggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  23199307 agggttagatttcattcataatcttttgtataatctctttttcttcttctacccataagtgcctatttgtataaagtgattattgtggatttaattggt 23199405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 42 - 242
Target Start/End: Complemental strand, 660842 - 660644
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||||||||||| | |||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  660842 cctaaggtaaggggg-gactagctttctctaataaggggttgtataattctgaaaaagg-tttaaccttgtagttgttgttagttttgatgttatagaaa 660745  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  660744 tttgggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattgg 660645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 48 - 242
Target Start/End: Original strand, 1627071 - 1627266
Alignment:
Q  48 gtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa-agggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 146  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||| || |||||||||||||||||||||||||||||    
T  1627071 gtaagggtgggactagctttctctaataatgagttgtataattctaaaaaaagggtttacccttgtatttattgttagttttgatgttatagaaattagg 1627170  T
Q  147 gttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||    
T  1627171 gttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgtctatgtgtataaagtgattattgtggatttaattggt 1627266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 18744927 - 18744765
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18744927 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 18744828  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgc 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18744827 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgc 18744765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 16063804 - 16063701
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16063804 ctaaggtaagggtgggactacctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttataggaat 16063705  T
Q  143 tagg 146  Q
    ||||    
T  16063704 tagg 16063701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 6551289 - 6551392
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| |||| ||||||  | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  6551289 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagatttgatgttataggaat 6551388  T
Q  143 tagg 146  Q
    ||||    
T  6551389 tagg 6551392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 32607315 - 32607423
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  32607315 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 32607413  T
Q  141 attagggtta 150  Q
    ||||| ||||    
T  32607414 attagagtta 32607423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 1627387 - 1627456
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  1627387 aaattgatgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 1627456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 18744614 - 18744558
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttt 291  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  18744614 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 18744558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 21398643 - 21398752
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttg--ttgttagttttgatgttatagaa 140  Q
    |||||||||||||| || ||||||| |||||||||| ||||||| ||||| |||| ||| || | | |||  |||  |||||||||||||||||||||||    
T  21398643 ctaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaagggggtttaacatgtttttgttttgttagttttgatgttatagaa 21398742  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  21398743 attagggtta 21398752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 21504147 - 21504081
Alignment:
Q  89 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagattt 155  Q
    ||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||| ||||    
T  21504147 ttctgaaaaagggtttaagtttgtagttgttagtagttttgatgttatagaaattagggttaaattt 21504081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 26762467 - 26762350
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttg 129  Q
    |||||||||| ||||||||||||||| ||||| | || | |||| || | || | |||| |||||||||||||||||||||||||||||  || ||||||    
T  26762467 cgatcgattaacctaaggtaagggtgggactaaccttctttaatcataa-ttatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttg 26762369  T
Q  130 atgttatagaaattagggtt 149  Q
    ||||| ||| ||||||||||    
T  26762368 atgttgtag-aattagggtt 26762350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 21398800 - 21398904
Alignment:
Q  48 gtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaa-gggtttaacctt----gtagttgttgttagttttgatgttatagaaat 142  Q
    ||||||||| ||||| | || | |||| |||||| |||||||||||||||| ||||||||||||    || |||||||||||||||||||||||||| |     
T  21398800 gtaagggtgggactaaccttctttaatcatgagt-gtataattctgaaaaaagggtttaacctttgttgttgttgttgttagttttgatgttatagagaa 21398898  T
Q  143 tagggt 148  Q
    ||||||    
T  21398899 tagggt 21398904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 24068234 - 24068175
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 150  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  24068234 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagagattagggtta 24068175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 1626916 - 1626992
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt 119  Q
    ||||||||||||||||||||| | || | |||| || |||  | |||| |||||||||||||||||||||||||||||    
T  1626916 cctaaggtaagggtgtgactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaaccttgtagttgtt 1626992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 26750085 - 26749978
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaa 140  Q
    ||||||||||||||| ||||| | || | |||| || |||  |||||| ||||||| |||||||||||||||||||||  | |||||||||||| ||| |    
T  26750085 cctaaggtaagggtgagactaaccttttttaatcataagta-tataatcctgaaaaggggtttaaccttgtagttgttaataagttttgatgttgtag-a 26749988  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  26749987 attagggtta 26749978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 20313328 - 20313226
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatg-ttatagaa 140  Q
    |||||||||||||| |||||||||  ||||||| || ||| ||||||||||||| |||||||||| | || ||||||||| | |||||||| ||| ||||    
T  20313328 ctaaggtaagggtgggactagcttc-tctaatagtgggtt-tataattctgaaatagggtttaacatggttgttgttgtttgattttgatgattagagaa 20313231  T
Q  141 attag 145  Q
    |||||    
T  20313230 attag 20313226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 22111955 - 22111923
Alignment:
Q  118 ttgttagttttgatgttatagaaattagggtta 150  Q
    |||||||||||||||||||||||||||||||||    
T  22111955 ttgttagttttgatgttatagaaattagggtta 22111923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 660506 - 660467
Alignment:
Q  255 tgttgttgatgaattcacttctgattgttattgtttttgt 294  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  660506 tgttgttgatgaattaacttctgattgttgttgtttttgt 660467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 14025848 - 14025881
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgtt 119  Q
    |||| |||||||||||||||||||||||||||||    
T  14025848 taatcctgaaaaagggtttaaccttgtagttgtt 14025881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 21300043 - 21300096
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  21300043 ctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaa 21300096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 21914473 - 21914510
Alignment:
Q  25 ggctgccgatcgattatcctaaggtaagggtgtgacta 62  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  21914473 ggctgccgatcgattaacctaaggtaagggtgggacta 21914510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 36315366 - 36315305
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 152  Q
    ||||||| ||||||||||| ||||||| ||||| ||||| | ||| ||||||||||||||||    
T  36315366 tgaaaaatggtttaaccttatagttgtcgttaggtttgaggattagagaaattagggttaga 36315305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 8833247 - 8833310
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||| ||||||||  || ||||||||||| ||| ||||||||||    
T  8833247 taatcctgaaaaagggtttaaccttatagttgttaataggttttgatgttgtag-aattagggtt 8833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 43 - 242
Target Start/End: Complemental strand, 2073 - 1876
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2073 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 1974  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||    
T  1973 tagggttagatttcgttcataatctttt-tataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggt 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 1755 - 1699
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttt 291  Q
    ||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  1755 aaatttgtgaagtataatgttgttgttgatgaattcacttctgatcgttgttgtttt 1699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 17520 - 17719
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17520 ctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgctgttatagaaat 17619  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  17620 tagggttatatttcattcataatcttttgtacaatcactttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggt 17719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 186195 - 186392
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186195 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 186294  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||    
T  186295 tagggttagatttcgttcataatctttt-tataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggt 186392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 186513 - 186569
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttt 291  Q
    ||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  186513 aaatttgtgaagtataatgttgttgttgatgaattcacttctgatcgttgttgtttt 186569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 148; Significance: 4e-78; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 15615 - 15813
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| |||  ||||||||||  |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15615 ctaaggtaagggtgggactaacttc-tctaataatggtttgtatgattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 15713  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| |||||||    
T  15714 tagggttagatttcattcataatcttttgtataatctctttttctacttctacacataagtgaatatatgtataaagtgattattgtggatttaattggt 15813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 15934 - 16003
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  15934 aaattggtgaagtataacgttattgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 16003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 4e-78; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 44 - 242
Target Start/End: Original strand, 20410512 - 20410708
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 143  Q
    |||||||||||||  | ||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||  |||||||||    
T  20410512 taaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaaaaggatttaaccttgtagttgttattagttttgatg--atagaaatt 20410609  T
Q  144 agggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  20410610 agggttagatctcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggt 20410708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 141 - 304
Target Start/End: Original strand, 21686158 - 21686321
Alignment:
Q  141 attagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21686158 attagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggattaaattg 21686257  T
Q  241 gtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  21686258 gtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgcgatgt 21686321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 15998968 - 15998806
Alignment:
Q  17 agaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagtt 116  Q
    ||||||||||||  || ||||||||||||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||||| ||||||||||||||||    
T  15998968 agaggaagggctatcggtcgattatcctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagtttaaccttgtagtt 15998869  T
Q  117 gttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatct 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15998868 gttgttagttttgatgttatagaaattagggttagatttcattgataatcttttgtataatct 15998806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 42 - 141
Target Start/End: Original strand, 21683073 - 21683171
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21683073 cctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaaaagggtttaaccttgtagttgttg-tagttttgatgttatagaaa 21683171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 19825485 - 19825576
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtt 134  Q
    |||||||||||||| |||||||||| |||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19825485 ctaaggtaagggtgagactagctttctctaataatgggttgcataattctgaaaaaggttttaaccttgtagttgttgttagttttgatgtt 19825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 18982625 - 18982515
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaa 141  Q
    ||||||||| |||| || || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||||    
T  18982625 ctaaggtaacggtgggattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgctaggtttgatgattagagaaa 18982526  T
Q  142 ttagggttaga 152  Q
    |||||||||||    
T  18982525 ttagggttaga 18982515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 23658142 - 23658044
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 140  Q
    |||||||||||||| ||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||  || ||||||||||| |||||    
T  23658142 ctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 23658044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 1819005 - 1818899
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| ||||||  |||| |||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  1819005 ctaaggtaagggtgagactaaccttctttaatcatgagta-tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaaat 1818907  T
Q  143 tagggtta 150  Q
    ||||||||    
T  1818906 tagggtta 1818899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 10446270 - 10446162
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| |||||||||   |||| ||| |||||||||| ||||||||||||    
T  10446270 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagtttcgatgttatagaa 10446172  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  10446171 attagggtta 10446162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 144
Target Start/End: Original strand, 34140455 - 34140554
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||| |||||   ||||||| ||||||||||||||||||||||||||||||| |||    
T  34140455 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattttgaaatctggtttaatcttgtagttgttgttagttttgatgttataggaat 34140552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 29045324 - 29045260
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  29045324 ctaaggtaagggtgagactagctttctctaataatgggttgtataattttgaaaaagggtttaac 29045260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 24506155 - 24506217
Alignment:
Q  84 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 146  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| |||||    
T  24506155 tataattctgaaaaagggtttaattttgtagttgttgatagttttgatgttatagaagttagg 24506217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 25601371 - 25601437
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatt 154  Q
    |||||||||||||||||||||||||   || |||||||||||| |||||||||||||||||||||||||    
T  25601371 taattctgaaaaagggtttaaccttt--gtagttgttagttttcatgttatagaaattagggttagatt 25601437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 144
Target Start/End: Original strand, 34153071 - 34153170
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||| |||||   | ||||| ||||||||||||||||||||||||||||||| |||    
T  34153071 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattttgaaatctgttttaatcttgtagttgttgttagttttgatgttataggaat 34153168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 31734772 - 31734655
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttg 129  Q
    |||||||||| ||||||||||||||| ||||| | || | |||| || |||  | |||||||||||||||||||||||||| |||||||  || ||||||    
T  31734772 cgatcgattaacctaaggtaagggtgggactaaccttctttaatcataagta-tgtaattctgaaaaagggtttaaccttgcagttgttaataggttttg 31734674  T
Q  130 atgttatagaaattagggtt 149  Q
    ||||| || |||||||||||    
T  31734673 atgttgta-aaattagggtt 31734655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 18982422 - 18982362
Alignment:
Q  89 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 149  Q
    ||||||||||||||||||  |||||||||||| ||||||||||| | ||||| ||||||||    
T  18982422 ttctgaaaaagggtttaattttgtagttgttgatagttttgatgctgtagaagttagggtt 18982362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 7217285 - 7217347
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||||||||||||  ||| ||||||||| ||| ||||||||||    
T  7217285 taatcctgaaaaagggtttaaccttgtagttgttaataggtttgatgttgtag-aattagggtt 7217347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 22557259 - 22557204
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 140  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| |||||    
T  22557259 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 22557204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 25922054 - 25921957
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 140  Q
    |||||||||||||| ||||| | |||| |||| || |||  | |||| || ||||||||||||||||||||||||||  || ||||||||||| |||||    
T  25922054 ctaaggtaagggtgggactaaccttatttaatcataagta-tgtaatcctaaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 25921957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 13285801 - 13285724
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 120  Q
    |||||||||||||| ||||| | || | |||| |||||||  ||||||||||||| ||||||| | |||| |||||||    
T  13285801 ctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaaaggggtttaccattgttgttgttg 13285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 15890711 - 15890764
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  15890711 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15890764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 16966837 - 16966800
Alignment:
Q  25 ggctgccgatcgattatcctaaggtaagggtgtgacta 62  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  16966837 ggctgccgatcgattatcctaagttaagggtgagacta 16966800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 18259155 - 18259192
Alignment:
Q  25 ggctgccgatcgattatcctaaggtaagggtgtgacta 62  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  18259155 ggctgccaatcgattatcctaaggtaagggtgggacta 18259192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 20183791 - 20183754
Alignment:
Q  25 ggctgccgatcgattatcctaaggtaagggtgtgacta 62  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  20183791 ggctgccgatcgattaacctaaggtaagggtgggacta 20183754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 22152200 - 22152237
Alignment:
Q  25 ggctgccgatcgattatcctaaggtaagggtgtgacta 62  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  22152200 ggctgccgatcgattaacctaaggtaagggtgggacta 22152237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 7828024 - 7827972
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 7827972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 12041609 - 12041673
Alignment:
Q  33 atcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 97  Q
    |||||||| ||||||||||||||| ||||| | || | ||||  | |||||||||||||||||||    
T  12041609 atcgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaaa 12041673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 19655231 - 19655283
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  19655231 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 19655283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 23150287 - 23150339
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 23150339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 23431488 - 23431551
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| ||||||||||||||||||||||||||| |  || ||||||||||| ||| ||||||||||    
T  23431488 taatcctgaaaaagggtttaaccttgtagttgctaataggttttgatgttgtag-aattagggtt 23431551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 43 - 241
Target Start/End: Original strand, 17939 - 18137
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| |||| ||||||  | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17939 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttatagaaat 18038  T
Q  143 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  18039 tagggttagatttcattcataatattttgtttaatctctttttttacttctacccataagtgcttatttgtataaagtgattattgtgaatttaattgg 18137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 44 - 242
Target Start/End: Original strand, 2454 - 2652
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaag--ggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||   |||||||||||||||| ||| |||||||||||||||||||||    
T  2454 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaatggtttaaccttgtagtcgttattagttttgatgttatagaaa 2553  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |  ||||||||||||||||||||||| ||||||    
T  2554 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtg--tctacgtataaagtgattattgtggatttaattgg 2651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 5303 - 5488
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||||||||||||| ||||| |||| ||||||  | |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |    
T  5303 cctaaggtaagggtgggactaactttctctaattttaagttgtataattcttaaaaagggtttaaccttgtagttgttgttcgttttgatgttatagata 5402  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattatt 227  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||    
T  5403 ttagggttagatttcattcataatcttttgtataatctccttttctacttcaacccataagtgcttatttgtataaagtgattatt 5488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 134; Significance: 9e-70; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 43 - 241
Target Start/End: Original strand, 61847 - 62048
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttata----g 138  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    |    
T  61847 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa-ggatttaaccttgtagttgttgttagttttgatgttatatatag 61945  T
Q  139 aaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaat 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||    
T  61946 aaattagggttagatttcattcataatcttttgtttaatctctttttctacttctacctataagtgcttatttgtataaagtgattattgtggatttaat 62045  T
Q  239 tgg 241  Q
    |||    
T  62046 tgg 62048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 68376 - 68331
Alignment:
Q  17 agaggaagggctgccgatcgattatcctaaggtaagggtgtgacta 62  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||    
T  68376 agaggaagggctgtcgatcgattatcttaaggtaagggtgggacta 68331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 94 - 242
Target Start/End: Original strand, 23932 - 24080
Alignment:
Q  94 aaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttct 193  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23932 aaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttct 24031  T
Q  194 acccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||||||  ||| |||||||||||||||||||||||| |||||||    
T  24032 acccataagtgactatatgtataaagtgattattgtggatttaattggt 24080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 44 - 242
Target Start/End: Original strand, 11160 - 11359
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaa 141  Q
    |||||||||| || |||||||||| |||||||||| ||||||| ||||| |||| ||||||| | | || ||||||  |||||||||||||||||| |||    
T  11160 taaggtaaggatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttatcat-gttgttgttttgttagttttgatgttatataaa 11258  T
Q  142 ttagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattgg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||| || ||||||    
T  11259 ttagggttagatttcattcataatcttttgtataatctctttttcttcttctacccataagtgtctatttgtataaagtgattattgtgggtttaattgg 11358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 2934 - 2831
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  2934 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagtttcgatgttataggaat 2835  T
Q  143 tagg 146  Q
    ||||    
T  2834 tagg 2831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 2828 - 2762
Alignment:
Q  84 tataattctgaaaaagggtttaacct--tgtagttgttgttagttttgatgttatagaaattagggtt 149  Q
    ||||||||| |||| ||||||||| |  ||| ||| |||||| |||||||||||||||||||||||||    
T  2828 tataattctaaaaaggggtttaacatgttgtcgtt-ttgttacttttgatgttatagaaattagggtt 2762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 1128 - 1022
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 143  Q
    ||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaaaagggtttaaccttgtagatgttgttagttttgatgttttagaaatt 1029  T
Q  144 agggtta 150  Q
    | |||||    
T  1028 atggtta 1022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 79; Significance: 6e-37; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 16418 - 16528
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaa 141  Q
    |||||||||||||| || || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  16418 ctaaggtaagggtgagattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaa 16517  T
Q  142 ttagggttaga 152  Q
    |||||||||||    
T  16518 ttagggttaga 16528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 18700 - 18811
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatg-ttatagaa 140  Q
    ||||||| |||||| || || |||| |||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||  ||||| ||| ||||    
T  18700 ctaaggtgagggtgggattaactttctctaataatgagttgtataattcttaaaaacggtttagccttgtagttgttgttaggtcatgatgattagagaa 18799  T
Q  141 attagggttaga 152  Q
    ||||||||||||    
T  18800 attagggttaga 18811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 18902 - 18962
Alignment:
Q  89 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 149  Q
    |||||||||| |||||||  |||||||||||| ||||||||||| ||||||| ||||||||    
T  18902 ttctgaaaaaaggtttaattttgtagttgttgatagttttgatgctatagaagttagggtt 18962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 16619 - 16679
Alignment:
Q  89 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 149  Q
    ||||||||||| ||||||  || ||||||||| ||||||||||| ||||||| ||||||||    
T  16619 ttctgaaaaagagtttaattttatagttgttgatagttttgatgctatagaagttagggtt 16679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 44 - 154
Target Start/End: Complemental strand, 4988 - 4878
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaat 142  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  4988 taaggtaagggtgggactagctttctctaataatg-gttgtataattctgtaaaagggtttaacctttgtagttgttgttagttttgatgttatagtgat 4890  T
Q  143 tagggttagatt 154  Q
    ||||||||||||    
T  4889 tagggttagatt 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 14019 - 13893
Alignment:
Q  25 ggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttag 124  Q
    |||||||||||| | ||| ||||||||||||| |||||||||| |||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||    
T  14019 ggctgccgatcgttaatc-taaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaaccttgaagttgttgttag 13921  T
Q  125 ttttgatgttatagaaattagggttaga 152  Q
    |||||||||| | | ||||||| |||||    
T  13920 ttttgatgttttgggaattaggtttaga 13893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 20019 - 19953
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 97  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||||  | |||  ||||||||||||||    
T  20019 cgatcgattaacctaaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaa 19953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 14585 - 14689
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaa 141  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||    
T  14585 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatgattagagaaa 14684  T
Q  142 ttagg 146  Q
    |||||    
T  14685 ttagg 14689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 23643 - 23747
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaa 141  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||    
T  23643 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatgattagagaaa 23742  T
Q  142 ttagg 146  Q
    |||||    
T  23743 ttagg 23747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 18639 - 18749
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgta-taattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 141  Q
    |||||||||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||| | | ||    
T  18639 ctaaggtaagggtgggactagctttctctaataatgagttgtaataattttgaaaaaaggtttaaccttgtagttgttgttagttttgatgttttgggaa 18738  T
Q  142 ttagggttaga 152  Q
    ||||| |||||    
T  18739 ttaggtttaga 18749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 19260 - 19154
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||| ||||||||| ||||| |||| ||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19260 ctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 19161  T
Q  143 tagggtt 149  Q
     ||||||    
T  19160 aagggtt 19154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 19160 - 19115
Alignment:
Q  97 aagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  19160 aagggtttaaccttgtagttgttgatagttttgatgttatagaaat 19115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 26776 - 26669
Alignment:
Q  47 ggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 146  Q
    |||||||||| || || |||| ||||||  |  |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  26776 ggtaagggtgggattaactttctctaattttaggttgtataattctgaaaaagggtttaactttgtagttgttgttagctttgatgttatagagattagg 26677  T
Q  147 gttagatt 154  Q
    ||||||||    
T  26676 gttagatt 26669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 23666 - 23564
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||  | || | |||| ||||||  ||||||||| |||||||||||||  |||||||||||  ||||||||||||||||||| |    
T  23666 ctaaggtaagggtgggactgaccttctttaatcatgagta-tataattctaaaaaagggtttaattttgtagttgttaatagttttgatgttatagaagt 23568  T
Q  143 tagg 146  Q
    ||||    
T  23567 tagg 23564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 2198 - 2287
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgat 131  Q
    ||||||||||||||| |||||  ||| ||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2198 cctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgat 2287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 28564 - 28493
Alignment:
Q  84 tataattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 154  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  28564 tataattctgaaaaagggtttaacctttgtagttgttgttagtttttatgttatagagattagggttagatt 28493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 8745 - 8853
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaacc--ttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||  |||||||||| ||||||| ||||| |||| ||||| ||||  |||| ||| |||||||||||||||||||||||    
T  8745 ctaaggtaagggtgagactagcttactctaataatgggttgtatgattctaaaaaggggttgaacctattgttgtt-ttgttagttttgatgttatagaa 8843  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  8844 attagggtta 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 5685 - 5578
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctga--aaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 140  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||||||  ||||||||||||| |||||||||||  || ||||||||||| ||| |    
T  5685 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgttaataggttttgatgttgtag-a 5587  T
Q  141 attagggtt 149  Q
    |||||||||    
T  5586 attagggtt 5578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 10999 - 10893
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaa 141  Q
    |||||||||||||  ||||||||| |||||||||| ||||||| ||||| |||||||||||||| | || ||||||  ||||||||||||||||||||||    
T  10999 taaggtaagggtggaactagctttctctaataatgggttgtatgattct-aaaaagggtttaacat-gttgttgttttgttagttttgatgttatagaaa 10902  T
Q  142 ttagggtta 150  Q
    |||||||||    
T  10901 ttagggtta 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 305 - 236
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  305 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 423 - 361
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 120  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||||    
T  423 gactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 40160 - 40268
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagt-tgta-taattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| ||||| | || |||||| |||||| | || ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  40160 ctaaggtaagggtgggactaaccttctctaatcatgagtatataataattctaaaaaagggtttaaccatgtagttgttgatagttttgatgttatagaa 40259  T
Q  141 attagggtt 149  Q
     ||||||||    
T  40260 gttagggtt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 23587 - 23503
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 127  Q
    |||||||||||||  |||||||||| |||||||||| ||||||||| ||| |||| ||||| ||||||| |||||||||||||||    
T  23587 ctaaggtaagggtaggactagctttctctaataatgggttgtataaatctaaaaaggggttaaaccttgcagttgttgttagttt 23503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 6471 - 6395
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt 119  Q
    |||||||||||||  |||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  6471 ctaaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaaaagggattaatcttgtagttgtt 6395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 2300 - 2221
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 122  Q
    |||||||||||||| |||||||||| | |||||||| |||||||||||||||||||||||||||| | || |||||||||    
T  2300 ctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaaaagggtttaacatagttgttgttgtt 2221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 38441 - 38543
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||||||||| | || | |||| ||||||  |||||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |    
T  38441 ctaaggtaagggtgtgactaaccttctttaatcatgagta-tataattctgaaaaagggtttaattttgtagttgttaatagttttgatgttatagaagt 38539  T
Q  143 tagg 146  Q
    ||||    
T  38540 tagg 38543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 59655 - 59757
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| | ||| | || | |||| ||||||  |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  59655 ctaaggtaagggtgggtctaaccttctttaatcatgagta-tataattctgaaaaagggtttaactttgtagttgttgatagttttgatattatagaaat 59753  T
Q  143 tagg 146  Q
    ||||    
T  59754 tagg 59757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 5507 - 5445
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggttta 105  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  5507 ctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 19909 - 19801
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaa 140  Q
    |||||||||||||  |||||| ||| |||||||||| ||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||    
T  19909 ctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaa 19811  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  19810 attagggtta 19801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 11668 - 11590
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 122  Q
    |||| |||||||| |||||  ||| ||||| |||| |||||||||||||||||||||||||||| | || |||||||||    
T  11668 taagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaacatcgttgttgttgtt 11590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 40160 - 40052
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaa 140  Q
    ||||||||||| || ||||| |||| |||||||||| ||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||    
T  40160 ctaaggtaaggatgcgactaactttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaa 40062  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  40061 attagggtta 40052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 127342 - 127450
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| ||||||||||  |||||| ||||| |||| |||||||||   |||| ||| ||||||||||||||||||||||     
T  127342 ctaaggtaagggtgggactagctttctctaataatggattgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagag 127440  T
Q  141 attagggtta 150  Q
    ||||||||||    
T  127441 attagggtta 127450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 10516 - 10447
Alignment:
Q  235 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgtcatgtgatgt 304  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  10516 aaattggcgaagtataatgttgttgttgatgaattcacttctgattgttcttgtttttgttatgagatgt 10447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 10633 - 10572
Alignment:
Q  58 gactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 120  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||||    
T  10633 gactagctttctctaaagatg-gttgtataattctgaaaaagggtttaacattgtagttgttg 10572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 669 - 748
Alignment:
Q  17 agaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  669 agaggaagggctgccgatcaattatcctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaa 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 3257 - 3155
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| ||||||  ||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||| |    
T  3257 ctaaggtaagggtgggactaaccttctttaatcatgagta-tataattatgaaaaagggtttaattttgtagttgttgatagttttgatgttatagaagt 3159  T
Q  143 tagg 146  Q
    ||||    
T  3158 tagg 3155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 168972 - 169051
Alignment:
Q  17 agaggaagggctgccgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  168972 agaggaagggctgccgatcaattatcctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaa 169051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 174286 - 174169
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttg 129  Q
    |||||||||| ||||| ||||||||| ||||| | || | |||| || |||  | |||| |||||||||||||||||||||||||||||  || ||||||    
T  174286 cgatcgattaacctaaagtaagggtgggactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttg 174188  T
Q  130 atgttatagaaattagggtt 149  Q
    ||||| ||| ||||||||||    
T  174187 atgttgtag-aattagggtt 174169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 143663 - 143611
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||||||||| |||| ||||||  | ||||||||||||||||||    
T  143663 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 143611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 66071 - 66150
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 122  Q
    |||||||||||||| |||||| ||| | |||||||| |||||||||||||||||||||||||||| | || |||||||||    
T  66071 ctaaggtaagggtgggactagatttctttaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 66150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 73139 - 73032
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaaa 141  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||| |||| |||||||||   |||| ||| || |||||||| ||||||||  ||    
T  73139 taaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgttgttgtt-ttattagtttttatgttataagaa 73041  T
Q  142 ttagggtta 150  Q
    |||||||||    
T  73040 ttagggtta 73032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 111425 - 111344
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgt 112  Q
    ||||||||||  |||||||||||||| | |||||||| |||||||||| ||||||| ||||| |||| ||||||||| ||||    
T  111425 cgatcgattaatctaaggtaagggtggggctagctttctctaataatgggttgtatgattctaaaaaggggtttaacattgt 111344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 75990 - 75885
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 140  Q
    |||||||||||||| |||||||||| || ||||||| ||||||| ||||| |||| |||||||||   |||| ||| || |||||||||||||||||  |    
T  75990 ctaaggtaagggtgggactagctttctccaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttattagttttgatgttataaga 75892  T
Q  141 attaggg 147  Q
    |||||||    
T  75891 attaggg 75885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 7513 - 7615
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| ||||||  ||| |||||||||||||||||||  || ||||||||| ||||||||||||||||||| |    
T  7513 ctaaggtaagggtgggactaaccttctttaattatgagta-tatgattctgaaaaagggtttaattttatagttgttgatagttttgatgttatagaagt 7611  T
Q  143 tagg 146  Q
    ||||    
T  7612 tagg 7615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 35185 - 35264
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 122  Q
    ||||||||||||||  |||||||||  ||||||||| ||||||||||||| |||||||||||||| | || |||||||||    
T  35185 ctaaggtaagggtggtactagctttccctaataatgggttgtataattctaaaaaagggtttaacatggttgttgttgtt 35264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 6468 - 6529
Alignment:
Q  94 aaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 154  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||    
T  6468 aaaaagggtttaacctttgtagttgttgttagttttgatgttatagagattatggctagatt 6529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 22472 - 22519
Alignment:
Q  17 agaggaagggctgccgatcgattatcctaaggtaagggtgtgactagc 64  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  22472 agaggaagggctgccgatcgattattctaaggtaagggtgagactagc 22519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 28726 - 28660
Alignment:
Q  84 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 150  Q
    |||||||||||||||| |||||| ||||||||||||  |||||||  |||||||| |||||||||||    
T  28726 tataattctgaaaaagcgtttaatcttgtagttgttaatagttttattgttataggaattagggtta 28660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 43786 - 43898
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatg-ttatagaa 140  Q
    |||||||||||||| |||||||||  |||||||||| ||| ||||||||||||| |||||||||| | || |||||| |||| |||||||| ||| ||||    
T  43786 ctaaggtaagggtgggactagcttc-tctaataatgggtt-tataattctgaaatagggtttaacatggttgttgttattagattttgatgattagagaa 43883  T
Q  141 attagggttagattt 155  Q
    |||||| || |||||    
T  43884 attaggttttgattt 43898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 17118 - 17057
Alignment:
Q  84 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 146  Q
    ||||||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||    
T  17118 tataattcttaaaaagggtttaactttgtagttgttgatag-tttgatattatagaaattagg 17057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 26649 - 26588
Alignment:
Q  84 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 146  Q
    ||||||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||    
T  26649 tataattcttaaaaagggtttaactttgtagttgttgatag-tttgatattatagaaattagg 26588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 135 - 74
Alignment:
Q  89 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 150  Q
    |||||||||||||||| |  |||||||||||  ||||||||||||||||||| |||||||||    
T  135 ttctgaaaaagggttttaatttgtagttgttaatagttttgatgttatagaagttagggtta 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 1313 - 1264
Alignment:
Q  100 ggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 149  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  1313 ggtttaaccttatagttgttgatagttttgatgttatagaaataagggtt 1264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 6819 - 6770
Alignment:
Q  100 ggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 149  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  6819 ggtttaaccttatagttgttgatagttttgatgttatagaaataagggtt 6770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 660 - 558
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| ||||||  ||||||||| ||||| |||||||  |||| ||||||| || |||||||||||||||| |    
T  660 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaatggtttaattttgttgttgttgataattttgatgttatagaagt 562  T
Q  143 tagg 146  Q
    ||||    
T  561 tagg 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 10433 - 10550
Alignment:
Q  31 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttg 129  Q
    |||||||||| ||||||||||||||| ||||| | || | |||| || |||  | |||| ||||||||||||||||| |||||||||||  || ||||||    
T  10433 cgatcgattaacctaaggtaagggtgggactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaacattgtagttgttaataggttttg 10531  T
Q  130 atgttatagaaattagggtt 149  Q
    ||||| ||| ||||||||||    
T  10532 atgttgtag-aattagggtt 10550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 49782 - 49680
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| | || | |||| ||||||   ||||||||||||||||||||||  || |  |||||| ||||||||||||||||||| |    
T  49782 ctaaggtaagggtgggactaaccttctttaatcatgagtcc-ataattctgaaaaagggtttaattttatttttgttgatagttttgatgttatagaagt 49684  T
Q  143 tagg 146  Q
    ||||    
T  49683 tagg 49680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 8897 - 8843
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaa 97  Q
    ||||| |||||||| |||||||||||||||||||||  |||||| ||||||||||    
T  8897 ctaagttaagggtgggactagctttatctaataatggattgtatgattctgaaaa 8843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 5615 - 5718
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatg-ttatagaa 140  Q
    |||||||||||||| ||||||| || |||||||||| ||| ||||||||||||| ||| |||||| | || ||||||||| | |||||||| ||| ||||    
T  5615 ctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattctgaaataggatttaacatggttgttgttgtttgattttgatgattagagaa 5712  T
Q  141 attagg 146  Q
    ||||||    
T  5713 attagg 5718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 377 - 438
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 152  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  377 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 11316 - 11227
Alignment:
Q  153 tttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 242  Q
    |||||||||||||| ||||||||||||| |||| | |||  |  || |||||| |||||||  ||||||||||||||| ||| |||||||    
T  11316 tttcattcataatcgtttgtataatctcctttttttcttaaattcaaaagtgcttatttgtgaaaagtgattattgtgaatttaattggt 11227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 356 - 293
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  356 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 68725 - 68789
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaac 107  Q
    |||||||||||||| ||||| |||| |||||||||| ||| ||| ||||| |||| |||||||||    
T  68725 ctaaggtaagggtgggactacctttctctaataatgggttatatgattctaaaaacgggtttaac 68789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 32046 - 31994
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||||||||| |||| ||||||  | ||||||||||||||||||    
T  32046 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 31994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 37353 - 37301
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||||||||| |||| ||||||  | ||||||||||||||||||    
T  37353 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 37301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 77740 - 77687
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  77740 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 77687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 499129 - 499092
Alignment:
Q  25 ggctgccgatcgattatcctaaggtaagggtgtgacta 62  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  499129 ggctgccaatcgattatcctaaggtaagggtgggacta 499092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 149
Target Start/End: Complemental strand, 12464 - 12433
Alignment:
Q  118 ttgttagttttgatgttatagaaattagggtt 149  Q
    ||||||||||||||||||||||||||||||||    
T  12464 ttgttagttttgatgttatagaaattagggtt 12433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 31982 - 31880
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 142  Q
    |||||||||||||| ||||| |  | | |||| ||||||  ||| |||||||||||||||||||  || ||||||||  ||||||||||||| ||||| |    
T  31982 ctaaggtaagggtgagactaaccatctttaatcatgagta-tatgattctgaaaaagggtttaattttatagttgttaatagttttgatgttgtagaagt 31884  T
Q  143 tagg 146  Q
    ||||    
T  31883 tagg 31880  T

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Target: scaffold0120 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 29316 - 29257
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 150  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||| |||| |||||    
T  29316 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagagattaaggtta 29257  T

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Target: scaffold1941 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 191 - 138
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  191 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 138  T

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Target: scaffold0632 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 1218 - 1165
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||||||||| ||||  |||||  | ||||||||||||||||||    
T  1218 ctaaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaa 1165  T

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Target: scaffold0338 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 10747 - 10780
Alignment:
Q  29 gccgatcgattatcctaaggtaagggtgtgacta 62  Q
    |||||||||||||||||||||||||||| |||||    
T  10747 gccgatcgattatcctaaggtaagggtgggacta 10780  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 35543 - 35490
Alignment:
Q  43 ctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    |||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  35543 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 35490  T

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Target: scaffold0065 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 56012 - 55975
Alignment:
Q  25 ggctgccgatcgattatcctaaggtaagggtgtgacta 62  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  56012 ggctgccaatcgattatcctaaggtaagggtgagacta 55975  T

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Target: scaffold1633 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 1257 - 1205
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  1257 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 1205  T

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Target: scaffold1283 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 468 - 520
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  468 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 520  T

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Target: scaffold0630 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 9074 - 9011
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||| ||||||||||||  || ||||||||||| ||| ||||||||||    
T  9074 taatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattagggtt 9011  T

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Target: scaffold0439 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 4475 - 4369
Alignment:
Q  42 cctaaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 140  Q
    ||||||||||||||| ||||| | || | |||| || |||  |||||| | |||||| ||||||||||||||||||||  || ||||||||||| ||| |    
T  4475 cctaaggtaagggtgggactaaccttctttaatcataagta-tataatcccgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtag-a 4378  T
Q  141 attagggtt 149  Q
    |||||||||    
T  4377 attagggtt 4369  T

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Target: scaffold0439; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 12288 - 12256
Alignment:
Q  118 ttgttagttttgatgttatagaaattagggtta 150  Q
    ||||||||||||||||||||||||||| |||||    
T  12288 ttgttagttttgatgttatagaaattaaggtta 12256  T

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Target: scaffold0145 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 8129 - 8085
Alignment:
Q  92 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgtta 135  Q
    ||||||||||||||||||||||||||||  || ||||||||||||    
T  8129 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtta 8085  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 13488 - 13406
Alignment:
Q  149 tagatttcattcataatcttt--tgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtg 230  Q
    |||||||||||||||||||||    ||||||||| |||||||||| ||  || |||||| |||||||| ||||| |||||||||    
T  13488 tagatttcattcataatctttaagttataatctc-ttttctacttatattcaaaagtgcttatttgtaaaaagttattattgtg 13406  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 62729 - 62666
Alignment:
Q  86 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 149  Q
    |||| |||||||||||||||||||||| ||||||  || ||||||||||| ||| ||||||||||    
T  62729 taatcctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtag-aattagggtt 62666  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 79101 - 79049
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  79101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 79049  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 78185 - 78237
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  78185 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 78237  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 24131 - 24183
Alignment:
Q  44 taaggtaagggtgtgactagctttatctaataatgagttgtataattctgaaa 96  Q
    ||||||||||||| ||||| |||| ||||||  | ||||||||||||||||||    
T  24131 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24183  T

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