View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7291_low_12 (Length: 309)

Name: NF7291_low_12
Description: NF7291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7291_low_12
NF7291_low_12
[»] chr5 (43 HSPs)
chr5 (32-192)||(14112039-14112201)
chr5 (1-192)||(39524919-39525112)
chr5 (1-192)||(31221124-31221317)
chr5 (1-192)||(37183566-37183759)
chr5 (31-192)||(31928910-31929073)
chr5 (31-192)||(6156904-6157067)
chr5 (22-194)||(38692565-38692740)
chr5 (22-192)||(15957913-15958085)
chr5 (31-185)||(38372474-38372630)
chr5 (31-192)||(32841756-32841918)
chr5 (22-192)||(12464903-12465076)
chr5 (31-192)||(26898588-26898751)
chr5 (1-190)||(38871814-38872005)
chr5 (31-192)||(33487784-33487947)
chr5 (36-192)||(26190107-26190265)
chr5 (22-192)||(15799389-15799561)
chr5 (32-194)||(20891787-20891950)
chr5 (31-192)||(27212877-27213039)
chr5 (53-192)||(40619770-40619911)
chr5 (1-192)||(7884336-7884530)
chr5 (31-192)||(28083161-28083326)
chr5 (22-159)||(24203501-24203641)
chr5 (22-192)||(26093620-26093795)
chr5 (78-192)||(21070587-21070701)
chr5 (53-192)||(27158279-27158420)
chr5 (31-111)||(4064585-4064667)
chr5 (128-193)||(8739066-8739131)
chr5 (135-192)||(16429258-16429315)
chr5 (53-119)||(23269532-23269600)
chr5 (152-192)||(6800725-6800765)
chr5 (53-114)||(26095287-26095350)
chr5 (140-192)||(42289740-42289792)
chr5 (79-186)||(31561667-31561774)
chr5 (135-189)||(5456335-5456389)
chr5 (151-192)||(18515101-18515142)
chr5 (60-110)||(26622312-26622364)
chr5 (128-192)||(11185972-11186036)
chr5 (128-192)||(28445284-28445347)
chr5 (128-192)||(43387945-43388008)
chr5 (133-192)||(5535215-5535274)
chr5 (159-192)||(5247283-5247316)
chr5 (135-192)||(33331420-33331477)
chr5 (79-111)||(29862836-29862868)
[»] chr7 (34 HSPs)
chr7 (23-192)||(42925425-42925596)
chr7 (31-192)||(37518048-37518211)
chr7 (1-192)||(19818561-19818753)
chr7 (1-192)||(43737263-43737456)
chr7 (1-191)||(19225384-19225576)
chr7 (1-192)||(36629384-36629577)
chr7 (1-192)||(9151977-9152165)
chr7 (42-192)||(47202709-47202861)
chr7 (22-192)||(31643243-31643414)
chr7 (31-192)||(8155110-8155273)
chr7 (1-192)||(36468324-36468515)
chr7 (76-192)||(24041982-24042097)
chr7 (1-192)||(42864886-42865080)
chr7 (31-192)||(33573833-33573991)
chr7 (31-171)||(33151414-33151555)
chr7 (31-192)||(7115054-7115218)
chr7 (1-192)||(3304536-3304736)
chr7 (22-187)||(36408573-36408732)
chr7 (62-191)||(24690122-24690250)
chr7 (31-122)||(26555012-26555105)
chr7 (1-191)||(36946078-36946270)
chr7 (79-190)||(43186042-43186157)
chr7 (6-192)||(31985302-31985490)
chr7 (32-191)||(1518919-1519087)
chr7 (101-192)||(28230277-28230368)
chr7 (128-192)||(16278323-16278387)
chr7 (31-192)||(6466922-6467088)
chr7 (31-116)||(3936319-3936407)
chr7 (80-192)||(48705784-48705896)
chr7 (152-192)||(26554948-26554988)
chr7 (1-114)||(37398754-37398869)
chr7 (129-192)||(8214379-8214442)
chr7 (135-190)||(47239505-47239560)
chr7 (128-192)||(5731064-5731127)
[»] chr8 (27 HSPs)
chr8 (1-192)||(11698101-11698294)
chr8 (32-192)||(8885237-8885400)
chr8 (1-192)||(3094866-3095059)
chr8 (1-192)||(42280676-42280869)
chr8 (53-192)||(28917009-28917149)
chr8 (31-192)||(31519679-31519840)
chr8 (1-192)||(34853509-34853702)
chr8 (32-187)||(40328109-40328266)
chr8 (1-192)||(27927735-27927919)
chr8 (31-192)||(14163842-14164005)
chr8 (1-192)||(17119665-17119857)
chr8 (62-192)||(36980811-36980943)
chr8 (13-122)||(9073697-9073808)
chr8 (1-133)||(36165681-36165816)
chr8 (31-180)||(44106434-44106585)
chr8 (76-192)||(7981772-7981890)
chr8 (40-182)||(28423640-28423785)
chr8 (128-194)||(40994980-40995046)
chr8 (81-192)||(10840538-10840654)
chr8 (128-192)||(31234606-31234671)
chr8 (128-192)||(33472287-33472351)
chr8 (151-192)||(4259467-4259508)
chr8 (128-189)||(10833397-10833457)
chr8 (151-191)||(9073852-9073892)
chr8 (22-126)||(21004586-21004692)
chr8 (31-192)||(36318007-36318170)
chr8 (141-193)||(9845414-9845466)
[»] chr4 (48 HSPs)
chr4 (1-192)||(54631277-54631470)
chr4 (53-194)||(46440055-46440198)
chr4 (22-194)||(7931866-7932040)
chr4 (32-192)||(25752228-25752390)
chr4 (31-192)||(19835739-19835902)
chr4 (1-192)||(25491180-25491373)
chr4 (1-192)||(48318849-48319042)
chr4 (62-192)||(18050974-18051106)
chr4 (22-192)||(29822790-29822962)
chr4 (22-192)||(53893811-53893982)
chr4 (31-192)||(34973083-34973246)
chr4 (1-189)||(40703853-40704043)
chr4 (31-194)||(25538761-25538926)
chr4 (31-166)||(52089404-52089541)
chr4 (22-192)||(6003458-6003630)
chr4 (22-192)||(6228598-6228770)
chr4 (31-192)||(38536390-38536553)
chr4 (22-189)||(2505819-2505988)
chr4 (22-191)||(32442020-32442191)
chr4 (97-184)||(52089541-52089628)
chr4 (1-192)||(17932922-17933115)
chr4 (43-191)||(27741899-27742049)
chr4 (31-191)||(8106613-8106775)
chr4 (31-192)||(49397231-49397393)
chr4 (40-192)||(38417020-38417173)
chr4 (31-192)||(41322878-41323040)
chr4 (62-191)||(49001341-49001477)
chr4 (43-189)||(47456831-47456984)
chr4 (77-188)||(3703044-3703155)
chr4 (101-192)||(23524078-23524169)
chr4 (22-192)||(31582215-31582379)
chr4 (76-192)||(14474000-14474113)
chr4 (78-189)||(372189-372300)
chr4 (141-192)||(32601169-32601220)
chr4 (13-192)||(37222162-37222346)
chr4 (135-192)||(48095647-48095704)
chr4 (136-192)||(20083296-20083352)
chr4 (31-111)||(55052484-55052566)
chr4 (128-189)||(25140597-25140657)
chr4 (128-192)||(42497720-42497784)
chr4 (157-192)||(47072334-47072369)
chr4 (142-189)||(53836072-53836119)
chr4 (135-192)||(5803213-5803270)
chr4 (31-113)||(41412962-41413046)
chr4 (78-115)||(47784254-47784291)
chr4 (155-192)||(47784338-47784375)
chr4 (135-192)||(48629351-48629408)
chr4 (152-192)||(4936507-4936547)
[»] chr1 (37 HSPs)
chr1 (1-192)||(40907719-40907912)
chr1 (1-192)||(41584450-41584643)
chr1 (1-192)||(52744628-52744821)
chr1 (22-192)||(18583329-18583501)
chr1 (1-191)||(45046636-45046828)
chr1 (31-187)||(34006472-34006630)
chr1 (22-189)||(23442940-23443109)
chr1 (1-192)||(28866415-28866608)
chr1 (22-192)||(38885415-38885587)
chr1 (22-192)||(42546169-42546341)
chr1 (22-192)||(33611195-33611367)
chr1 (78-192)||(24472613-24472726)
chr1 (22-192)||(27795032-27795204)
chr1 (31-191)||(6223539-6223699)
chr1 (79-192)||(44572885-44572998)
chr1 (61-183)||(49786509-49786633)
chr1 (22-132)||(45567735-45567847)
chr1 (31-192)||(7011421-7011585)
chr1 (31-146)||(26723319-26723436)
chr1 (22-136)||(15069683-15069798)
chr1 (1-121)||(49677664-49677786)
chr1 (79-192)||(3561120-3561233)
chr1 (132-192)||(41584366-41584426)
chr1 (138-192)||(49677783-49677837)
chr1 (128-192)||(800678-800741)
chr1 (152-192)||(40650489-40650529)
chr1 (31-111)||(17000590-17000672)
chr1 (128-192)||(9445974-9446037)
chr1 (76-119)||(25563272-25563315)
chr1 (135-188)||(8704307-8704360)
chr1 (151-192)||(38131218-38131259)
chr1 (130-190)||(26230352-26230412)
chr1 (31-104)||(40650548-40650623)
chr1 (31-107)||(34162591-34162669)
chr1 (135-189)||(43319073-43319126)
chr1 (152-192)||(6099726-6099766)
chr1 (152-192)||(6099906-6099946)
[»] chr3 (43 HSPs)
chr3 (22-192)||(46622580-46622752)
chr3 (34-191)||(28873220-28873379)
chr3 (1-192)||(50716433-50716627)
chr3 (1-192)||(50796220-50796414)
chr3 (31-192)||(51258615-51258778)
chr3 (22-192)||(34821128-34821300)
chr3 (31-192)||(35142285-35142447)
chr3 (22-191)||(3351852-3352023)
chr3 (31-191)||(3902592-3902754)
chr3 (62-192)||(4394221-4394353)
chr3 (1-188)||(38977537-38977726)
chr3 (22-192)||(47302220-47302393)
chr3 (22-192)||(2358407-2358579)
chr3 (22-183)||(43472762-43472926)
chr3 (31-189)||(35345697-35345857)
chr3 (34-192)||(39150023-39150176)
chr3 (53-181)||(47739729-47739859)
chr3 (74-192)||(51540412-51540530)
chr3 (22-192)||(3938384-3938556)
chr3 (22-192)||(33439383-33439561)
chr3 (22-171)||(52777433-52777583)
chr3 (129-192)||(500971-501034)
chr3 (110-192)||(29048622-29048704)
chr3 (31-192)||(49096002-49096174)
chr3 (79-191)||(51816475-51816587)
chr3 (109-192)||(41300901-41300984)
chr3 (78-192)||(14828701-14828817)
chr3 (1-115)||(47123207-47123323)
chr3 (1-115)||(47130573-47130689)
chr3 (31-192)||(40062590-40062754)
chr3 (53-114)||(30721674-30721736)
chr3 (135-189)||(34009882-34009936)
chr3 (156-192)||(30721619-30721655)
chr3 (136-192)||(35081682-35081738)
chr3 (78-189)||(43419917-43420028)
chr3 (128-192)||(45244607-45244670)
chr3 (1-105)||(51492980-51493087)
chr3 (154-192)||(43471467-43471505)
chr3 (151-192)||(29036137-29036178)
chr3 (135-176)||(45711886-45711927)
chr3 (128-188)||(4300066-4300125)
chr3 (155-191)||(11266573-11266609)
chr3 (79-178)||(50384271-50384373)
[»] chr2 (33 HSPs)
chr2 (31-192)||(25217554-25217717)
chr2 (22-192)||(42894579-42894751)
chr2 (1-192)||(41510209-41510402)
chr2 (22-192)||(34517303-34517477)
chr2 (74-192)||(44465520-44465638)
chr2 (41-192)||(33452222-33452376)
chr2 (6-192)||(15994899-15995081)
chr2 (33-192)||(38308612-38308773)
chr2 (22-192)||(5507621-5507794)
chr2 (53-192)||(27670729-27670870)
chr2 (88-192)||(17474578-17474682)
chr2 (32-192)||(38065357-38065519)
chr2 (1-192)||(32187664-32187842)
chr2 (22-192)||(41202969-41203138)
chr2 (76-192)||(41854683-41854800)
chr2 (31-192)||(39447373-39447531)
chr2 (76-192)||(30763907-30764024)
chr2 (31-192)||(35251141-35251306)
chr2 (22-126)||(16750275-16750381)
chr2 (81-191)||(33440291-33440401)
chr2 (128-192)||(17133035-17133099)
chr2 (79-192)||(11457209-11457326)
chr2 (153-192)||(16750224-16750263)
chr2 (31-146)||(19109839-19109958)
chr2 (1-139)||(36875166-36875305)
chr2 (89-189)||(27900396-27900497)
chr2 (143-192)||(42604806-42604855)
chr2 (128-189)||(45293939-45294000)
chr2 (61-146)||(42478984-42479071)
chr2 (79-180)||(32069031-32069131)
chr2 (156-192)||(8388980-8389016)
chr2 (128-192)||(9847086-9847149)
chr2 (152-192)||(25715795-25715834)
[»] scaffold0010 (1 HSPs)
scaffold0010 (31-193)||(140696-140861)
[»] chr6 (25 HSPs)
chr6 (22-192)||(4508087-4508259)
chr6 (61-192)||(2539692-2539825)
chr6 (31-192)||(21514816-21514979)
chr6 (31-192)||(3717067-3717230)
chr6 (31-192)||(2813007-2813172)
chr6 (31-191)||(17264621-17264782)
chr6 (31-189)||(5639073-5639232)
chr6 (1-189)||(14587349-14587538)
chr6 (31-192)||(24604146-24604309)
chr6 (76-192)||(237051-237172)
chr6 (31-113)||(5699777-5699861)
chr6 (60-133)||(7412990-7413065)
chr6 (31-192)||(29519490-29519650)
chr6 (1-110)||(13800894-13801005)
chr6 (138-192)||(5699918-5699972)
chr6 (151-192)||(9905396-9905437)
chr6 (151-192)||(1945367-1945408)
chr6 (13-192)||(16450407-16450592)
chr6 (31-111)||(23407008-23407090)
chr6 (135-189)||(17501305-17501358)
chr6 (157-192)||(7413106-7413141)
chr6 (157-192)||(7416125-7416160)
chr6 (31-194)||(14037748-14037913)
chr6 (135-192)||(29630749-29630806)
chr6 (41-115)||(34528661-34528737)
[»] scaffold0018 (1 HSPs)
scaffold0018 (59-194)||(174144-174279)
[»] scaffold0508 (1 HSPs)
scaffold0508 (1-192)||(3178-3373)
[»] scaffold0137 (1 HSPs)
scaffold0137 (13-192)||(9283-9463)
[»] scaffold0027 (2 HSPs)
scaffold0027 (31-117)||(141824-141912)
scaffold0027 (152-192)||(141779-141819)
[»] scaffold0564 (1 HSPs)
scaffold0564 (76-192)||(4629-4745)
[»] scaffold0182 (1 HSPs)
scaffold0182 (151-192)||(23306-23347)
[»] scaffold0016 (2 HSPs)
scaffold0016 (135-192)||(205895-205951)
scaffold0016 (128-192)||(205684-205747)
[»] scaffold0770 (1 HSPs)
scaffold0770 (155-189)||(4122-4156)
[»] scaffold0029 (1 HSPs)
scaffold0029 (155-189)||(102426-102460)


Alignment Details
Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 14112039 - 14112201
Alignment:
Q  32 attgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcac 129  Q
    |||||||||||||||||||  ||||| |||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  14112039 attgttacttgttcttagtcaaaaatcgggttttcggactacttgataggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgaa 14112138  T
Q  130 tcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  14112139 tcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 14112201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 39524919 - 39525112
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  |||||||||||||||||||| |||||||||||||||| |||||||  || ||||||||||||| ||||||    
T  39524919 cttcctaactctcatccttctgttttgggtcattgttacttgttcttagtccaaaattgggttttcgaactacttgatcagattgctccgaaatttcccc 39525018  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  39525019 agaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttcttgtgggactctgcccctcaaaatccaaaattccatcgtttagac 39525112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 31221317 - 31221124
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  |||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  31221317 cttcctaactctcatctttctgttttgggtcattgttacatgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttcccc 31221218  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||||    
T  31221217 agaaaatcagaaaaaattcaaggaccgtgacttccatagaagggacttcttacgagactccgcccctcaaaatccaaaatttcatcgtttagac 31221124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 37183759 - 37183566
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||||||||||||||  ||||| |||||||| ||||||||  ||||||||||||||||| |||||    
T  37183759 cttcctaactctcatctttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacatcccc 37183660  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    | |||||||||||||||||||||||||| |||||| |||||||||| | || |||||||||||||||||||||||||||||||||| |||||||    
T  37183659 ataaaatcagaaaaaattcaaggaccatgactcccgtagaagggacatcttacgggactccgcccctcaaaatccaaaattccatcatttagac 37183566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 31929073 - 31928910
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||   ||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31929073 cattgttacctgttcttagttaaaaaccaggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatga 31928974  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  31928973 ctcccttagaagggacttcttgcgggactccgcccttcaaaatccaaaatttcatcgtttagac 31928910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 6156904 - 6157067
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||  ||||||| || ||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  6156904 cattgttacatgttcttagttaaaaaccgggtttttgggctacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaaggaccatga 6157003  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| ||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6157004 ctcccgtagtagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 6157067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 38692740 - 38692565
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  |||||||||   ||||||||  ||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  38692740 gttttgggtcattgttacccattcttagtcaaaaatcgggttttcggactacttggtcggattgctccgaaacttccccaaaaaatcagaaaaaattcaa 38692641  T
Q  120 ggaccatcactcccata-gaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagacac 194  Q
    ||||||| |||||| || |||||||||| || |||||||||||||||||||||||||||||| |||||||||||||    
T  38692640 ggaccatgactcccttaggaagggacttcttacgggactccgcccctcaaaatccaaaattctatcgtttagacac 38692565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 15957913 - 15958085
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  |||| |||| ||||||||||  |||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  15957913 gttttgggtcattattacctgttcttagtcaaaaatcaggttttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 15958012  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| |||||| |||||| ||||| ||  |||||| |||| |||||||||||||||| ||||||||||||    
T  15958013 ggaccataactcccttagaagcgacttcttatgggacttcgcctctcaaaatccaaaatttcatcgtttagac 15958085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 38372474 - 38372630
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  |||||||||||||||| ||||||  |||||| |||||||||||||||||||| ||||||||||||||||||||||| |    
T  38372474 cattgttacatgttcttagttaaaaattgggttttcgggctacttgatcggatcgctccgaaacttccccagaagatcagaaaaaattcaaggaccatga 38372573  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcg 185  Q
    || || |||||| ||||| || ||||||||| |||||||||||||||||||||||||    
T  38372574 cttccttagaagagacttcttacgggactccacccctcaaaatccaaaattccatcg 38372630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 32841918 - 32841756
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||| ||||  ||||| |||||||||| ||||||  |||||||||||||||| ||||| |||||||||||||||||||||||| ||| |    
T  32841918 cattgttacatgttcgtagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaaattccc-agaaaatcagaaaaaattcaaggatcatga 32841820  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  32841819 ctcccctagaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagac 32841756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 12465076 - 12464903
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaa-ttca 118  Q
    |||||||| ||||||||||||||||||||  ||||| |||||||| ||||||||  ||||||||||| |||||| ||||| |||||||||||||| ||||    
T  12465076 gttttggatcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaactaccccaaaaaatcagaaaaaaattca 12464977  T
Q  119 aggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||| ||||| |||||||| |||| || |||||||| ||||||||||||||||||||||||  |||||||    
T  12464976 aggaccatgactcctatagaaggaacttcttacgggactctgcccctcaaaatccaaaattccattatttagac 12464903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 26898751 - 26898588
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||  ||||||||||  ||||| | |||||||| ||||||  ||||||||||||||||||| |||| |||||||||||||||||||||||||| |    
T  26898751 cattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctccgaaacttgcccaaaaaatcagaaaaaattcaaggaccatga 26898652  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||  |||||||||||| || | ||||||||||||||||||||||||||| ||||||||||||    
T  26898651 ctcctgtagaagggacttcttacaggactccgcccctcaaaatccaaaatttcatcgtttagac 26898588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 38871814 - 38872005
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||| |||||||| ||||||||  ||||||||||||||||||| |||    
T  38871814 cttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttaatcggattgctccgaaactttccc 38871913  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttag 190  Q
    |||||||||||||||||||||||||| | ||||||| ||||| ||||| || |||||||  |||||| |||||||||||||| |||||||||    
T  38871914 agaaaatcagaaaaaattcaaggaccgtgactcccaaagaagagacttcttacgggactttgccccttaaaatccaaaattctatcgtttag 38872005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 33487784 - 33487947
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| | |||||||| ||||||  |||  |||||||||||||||||||||||||||||||||| ||||||| ||| |    
T  33487784 cattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcgatttgctccgaaacttccccagaaaatcagaaaaaagtcaaggatcatga 33487883  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||||||||| ||  ||||| |||||||| ||||||||||||||||||||||||||    
T  33487884 ctcccttagaagggacttcttttgggaccccgcccctaaaaatccaaaattccatcgtttagac 33487947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 26190265 - 26190107
Alignment:
Q  36 ttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactccc 133  Q
    |||| ||||||||||  ||||| ||||||||||||||||   ||||||||||| |||||||||||| ||||||| ||||||||||| |||||| ||||||    
T  26190265 ttacctgttcttagtcaaaaatcgggttttcggactactagatcggattgctctgaaacttccccaaaaaatcaaaaaaaattcaacgaccatgactccc 26190166  T
Q  134 atagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
     ||||||| |||| ||  |||||||||||||||||||||||||||||||| ||||||||    
T  26190165 ctagaaggaacttcttaagggactccgcccctcaaaatccaaaattccattgtttagac 26190107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 15799389 - 15799561
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactacttt--cggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  ||||| |||||| ||| ||||||   |||||||||||||||||| |||||||||||| |||||||||||    
T  15799389 gttttgggtcattgttacatgttcttagtcaaaaatcgggtttccgggctacttgaccggattgctccgaaacttgcccagaaaatcaaaaaaaattcaa 15799488  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||  ||||| ||||||||||||     |||||||| ||||||||||||||||||||||||||||||||    
T  15799489 ggaccatgcctcccctagaagggacttccaatgggactccacccctcaaaatccaaaattccatcgtttagac 15799561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 20891787 - 20891950
Alignment:
Q  32 attgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcac 129  Q
    |||||||| | ||||||||  ||||| |||||||| | ||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||    
T  20891787 attgttacctattcttagtcaaaaatcgggttttcaggctacttgatcggattgctccgaaacttccccagaaaa-cagaaaaaattcaaggatcatgac 20891885  T
Q  130 tcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagacac 194  Q
    |||| || ||||||||| || ||||| |||| || ||||||||||||||||||||||||||||||    
T  20891886 tcccctacaagggacttcttacgggattccgtccttcaaaatccaaaattccatcgtttagacac 20891950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 27212877 - 27213039
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| |||||||||||||| ||  | |||||||||||| ||||||| ||||||||||||||| ||||| | |||| |    
T  27212877 cattgttacctgttcttagtcaaaaatcgggttttcggactatttgattggattgctccgatacttccctagaaaatcagaaaaa-ttcaacgtccatga 27212975  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||||||||| || |||||||||||||||||||||| |||||||||| ||||||||    
T  27212976 ctcccctagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtttagac 27213039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 53 - 192
Target Start/End: Complemental strand, 40619911 - 40619770
Alignment:
Q  53 aaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttg 150  Q
    ||||| |||||| ||||||||||  |||||||| ||||||||||||| ||||||||| |||||||||||||| ||| ||||| | |||||| |||| ||     
T  40619911 aaaatcgggtttccggactacttggtcggattgttccgaaacttccctagaaaatcataaaaaattcaaggatcatgactccaaaagaaggaacttctta 40619812  T
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  40619811 cgggactccgcccctcaaaatccaaaattccatcatttagac 40619770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 7884336 - 7884530
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  | ||| || ||||||| ||||||  |||||||||||||||||||||||    
T  7884336 cttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaagaatcggattttcgggctacttgatcggattgctccgaaacttcccc 7884435  T
Q  99 -agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
     | |||||||||||| ||||||||||||| |||||| |||||| ||||| || ||| |||||||||||||||||| |||||| ||| ||||||||    
T  7884436 tataaaatcagaaaacattcaaggaccatgactcccgtagaagagacttcttacggaactccgcccctcaaaatctaaaatttcattgtttagac 7884530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 28083326 - 28083161
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| |||||||||   ||||| | |||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  28083326 cattgttacctgttcttaggaaaaaatcgagttttcggactacttgatcggattgctccgatacttccccagaaaatcagaaaaaattcaaggaccatga 28083227  T
Q  129 ctcccatagaag--ggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| ||||||    | || ||  ||||||  |||||||||||||||||||||||||||| ||||    
T  28083226 ctcccttagaagcaaaaattcttatgggactatgcccctcaaaatccaaaattccatcgttcagac 28083161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 24203641 - 24203501
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatca-gaaaaaattca 118  Q
    |||||||| ||||||||| ||||||||||  ||||||| |||||||| ||| ||  |||||||||||||||||||||| ||||||||| |||||||||||    
T  24203641 gttttggatcattgttacctgttcttagttaaaaattgagttttcgggctatttgatcggattgctccgaaacttcccaagaaaatcatgaaaaaattca 24203542  T
Q  119 aggaccatcactcccatagaagggactttttgcgggactcc 159  Q
    |||||||| |||||| |||||||||||| ||  ||||||||    
T  24203541 aggaccatgactcccttagaagggacttcttatgggactcc 24203501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 26093620 - 26093795
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactacttt--cggattgctccgaaacttccccagaaaatcagaaaaaat---t 116  Q
    |||||||  |||||||| |||||||||||  ||||||| |||||| | ||| ||   | ||||||  |||||||||| || ||||||||||||||    |    
T  26093620 gttttgggtcattgttagttgttcttagtcaaaaattgagttttcaggctatttgaacagattgcctcgaaacttcctcacaaaatcagaaaaaaaaaat 26093719  T
Q  117 caaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| ||  |||||| |||| ||||||| || ||||||||| |||||||||||||||||||||||| |||||||    
T  26093720 caaggatcaaaactcccgtagaggggacttcttacgggactcctcccctcaaaatccaaaattccatcatttagac 26093795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 21070587 - 21070701
Alignment:
Q  78 ggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaa 177  Q
    |||||||| ||||||||||||| |||||||  ||||| |||||   ||  |||||| |||||||||||| ||   |||| | ||||||||||||||||||    
T  21070587 ggattgcttcgaaacttccccaaaaaatcaagaaaaaatcaagagtcaagactcccctagaagggacttcttattggacactgcccctcaaaatccaaaa 21070686  T
Q  178 ttccatcgtttagac 192  Q
    |||||| ||||||||    
T  21070687 ttccattgtttagac 21070701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 192
Target Start/End: Original strand, 27158279 - 27158420
Alignment:
Q  53 aaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttg 150  Q
    |||||| ||||||| | ||||||  || |||||||||||||||| ||||||||||||| ||||| ||||||| ||  | || | ||  ||  ||||  |     
T  27158279 aaaattcggttttcaggctacttgatcagattgctccgaaactttcccagaaaatcaggaaaaaatcaaggatcaagattctcgtaagagaaacttcata 27158378  T
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    | ||| ||||||||||||||||||||||||||||||||||||    
T  27158379 ctggattccgcccctcaaaatccaaaattccatcgtttagac 27158420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 4064667 - 4064585
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaa 111  Q
    ||||||||| ||||||||||  ||||| |  ||||||| ||||||  | ||||||||||||||||||||||||||||||||||    
T  4064667 cattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccccagaaaatcagaaa 4064585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 8739131 - 8739066
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagaca 193  Q
    |||||| ||||||| |||| || |||||||||||||||||||||||||||||| ||  ||||||||    
T  8739131 actcccttagaaggaacttattacgggactccgcccctcaaaatccaaaattctattatttagaca 8739066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 16429258 - 16429315
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||| || ||||||||||||||||||||| |||||||  |||||||||||    
T  16429258 tagaagggacttcttacgggactccgcccctcaaaattcaaaattttatcgtttagac 16429315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 23269532 - 23269600
Alignment:
Q  53 aaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    ||||| |||||||||| ||||||  |||||||||| ||||||||||||||||||||| |||||| ||||    
T  23269532 aaaatcgggttttcgggctacttgatcggattgcttcgaaacttccccagaaaatcataaaaaaatcaa 23269600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 6800765 - 6800725
Alignment:
Q  152 gggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  6800765 gggactccgcccctcaaaatccaaaatttcatcgtttagac 6800725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 26095287 - 26095350
Alignment:
Q  53 aaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaa 114  Q
    ||||| ||||||| || ||||||  || ||||||||||||||||||||||||||||||||||||    
T  26095287 aaaatcgggtttttgggctacttgttcagattgctccgaaacttccccagaaaatcagaaaaaa 26095350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 42289740 - 42289792
Alignment:
Q  140 gggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||  ||||||| ||||||||||||||||||||| |||||||||||    
T  42289740 gggactttttctgggactctgcccctcaaaatccaaaattctatcgtttagac 42289792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 31561667 - 31561774
Alignment:
Q  79 gattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaat 178  Q
    |||| ||||||||||| |||||||||||| || |||   ||||||||  |||||| ||||||  |||| || ||||||| | | ||||||||||||||||    
T  31561667 gattactccgaaactttcccagaaaatcaaaagaaaaaaaaggaccaagactcccgtagaagaaacttcttacgggacttcactcctcaaaatccaaaat 31561766  T
Q  179 tccatcgt 186  Q
    | ||||||    
T  31561767 ttcatcgt 31561774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 5456335 - 5456389
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||||||||| || || |||||||||||| |||||||||||||||| |||||||||    
T  5456335 tagaagggatttcttacgggactccgcctctcaaaatccaaaatttcatcgttta 5456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 18515101 - 18515142
Alignment:
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  18515101 cgggactccgcccctcaaaatctaaaattccatcatttagac 18515142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 26622312 - 26622364
Alignment:
Q  60 ggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaa 110  Q
    ||||||||||||||||  || |||||||||||||||||| |||||||||||||    
T  26622312 ggttttcggactacttgatcagattgctccgaaacttcctcagaaaatcagaa 26622364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 11186036 - 11185972
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| | |||||||||| || ||  ||||||||||||||||| |||||||| |||||||||||    
T  11186036 actcccgttgaagggacttcttacgatactccgcccctcaaaattcaaaattcaatcgtttagac 11185972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 28445347 - 28445284
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||||||||| ||  |  ||||||||| ||||||||||||||||||||||||||||    
T  28445347 actcccttagaagggacttcttatgatactccgccc-tcaaaatccaaaattccatcgtttagac 28445284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 43388008 - 43387945
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| ||||| |||||| || |||||||||| || |||||||||||||||||||| |||||||    
T  43388008 actcccttagaaaggacttcttacgggactccgtcc-tcaaaatccaaaattccatcatttagac 43387945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 5535274 - 5535215
Alignment:
Q  133 catagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||| |||| ||| |||| ||||||| ||||||||  ||||||||||||||||||    
T  5535274 catagaaggaacttcttgtgggattccgcccatcaaaatcataaattccatcgtttagac 5535215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 5247316 - 5247283
Alignment:
Q  159 cgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||||||| ||||||||||||    
T  5247316 cgcccctcaaaatccaaaatttcatcgtttagac 5247283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 33331420 - 33331477
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||| || |  |||| || |||||||||||||||||| ||||||||||||    
T  33331420 tagaagggacttcttaccagacttcgtccctcaaaatccaaaatttcatcgtttagac 33331477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 29862836 - 29862868
Alignment:
Q  79 gattgctccgaaacttccccagaaaatcagaaa 111  Q
    ||||||||||||||||||| |||||||||||||    
T  29862836 gattgctccgaaacttccctagaaaatcagaaa 29862868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 42925596 - 42925425
Alignment:
Q  23 ttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaag 120  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||| ||||||  ||||||||||||||||||| |||||||||||||||| ||||||||    
T  42925596 ttttggatcattgttacttgttcttagtcaaaaattgggttttcgggctacttgatcggattgctccgaaacttacccagaaaatcagaaacaattcaag 42925497  T
Q  121 gaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  42925496 gaccatgactcccttagaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagac 42925425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 37518211 - 37518048
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37518211 cattgttacctgttcttagttaaaaattgggtttttggactatttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatga 37518112  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||| ||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  37518111 ctcccatagaagagacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagac 37518048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 19818561 - 19818753
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||| ||  ||||| ||||||| |||||||||  ||||||||||||||||||| |||    
T  19818561 cttcctaactctcatccttctgttttgggtcattgttacctgttcttggtcgaaaatcgggtttttggactacttgatcggattgctccgaaactttccc 19818660  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| || ||||||||| |||||| |||||||||||||||||||||||||    
T  19818661 agaaaatcagaaaaaattcaaggaccatgactcccgtagaagggacttcttacgggactccacccctc-aaatccaaaattccatcgtttagac 19818753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 43737263 - 43737456
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| ||||||  ||| ||| |||||||  ||||||||| ||||||||||  ||||  |||||||||| ||||||  |||||||||||||||| || |||    
T  43737263 cttcctaactctgatccttatgttttgggtcattgttacatgttcttagttaaaaaccgggttttcgggctacttgatcggattgctccgaaattttccc 43737362  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||    
T  43737363 agaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttcttgtgggactccgcccctcaaaatctaaaattccatcgtttagac 43737456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 19225576 - 19225384
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  |||||||||   ||||||||  |||||  ||||||||||||| ||  |||||||||||||||||||||||    
T  19225576 cttcctaactctcatccttctgttttgggtcattgttacccattcttagtcaaaaatcaggttttcggactatttgatcggattgctccgaaacttcccc 19225477  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||| || | |||||||||||||||||||||||||||||||||||||||    
T  19225476 agaaaatcagaaaaaattcaaggaacatgactcccatagaaggaacttcttacaggactccgcccctcaaaatccaaaattccatcgtttaga 19225384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 36629384 - 36629577
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  || |||||| || |||||||  ||||| |||||||||| ||||||  |||||||||||||||||||||||    
T  36629384 cttcctaactctcatccttctgttttggctcactgttacctggtcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 36629483  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    | |||||||||||||||||||||||||| |||||| |||||||||||| || |||||||||  || ||||||||||||||||||||||||||||    
T  36629484 aaaaaatcagaaaaaattcaaggaccatgactcccgtagaagggacttcttacgggactccatccttcaaaatccaaaattccatcgtttagac 36629577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 9151977 - 9152165
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||| ||||||| |||||||||  ||||||||||||||||||||| |    
T  9151977 cttcctaactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttccac 9152076  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||     ||||| ||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  9152077 agaaaa-----aaaaaatcaaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 9152165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 47202709 - 47202861
Alignment:
Q  42 gttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaa 139  Q
    |||||||||  ||||| |||||||||| ||||||  | |||||||||  ||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  47202709 gttcttagtcaaaaatcgggttttcgggctacttgattggattgctcttaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccatagaa 47202808  T
Q  140 gggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| ||  |||||||||||||||||||||||||||||||| ||||||||    
T  47202809 gggacttcttaagggactccgcccctcaaaatccaaaattccattgtttagac 47202861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 31643243 - 31643414
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  ||||| |||||| ||||||||||  ||||||||||| ||||||||| || |||||||||||||||||||    
T  31643243 gttttgggtcattgttacatgttcttagtcaaaaatcgggttt-cggactacttgatcggattgctctgaaacttccgcaaaaaatcagaaaaaattcaa 31643341  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| |||||| ||||||| |||| ||  |||||||| |||||||||||||||||||||||  |||||||    
T  31643342 ggaccatgactcccttagaaggaacttcttatgggactccacccctcaaaatccaaaattccattatttagac 31643414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 8155110 - 8155273
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    |||| |||| ||||||||||  ||||| |||||||||||||||||  ||| |||| || |||||||||| | |||||||||||||||||||||| ||| |    
T  8155110 cattattacctgttcttagtcaaaaatcgggttttcggactacttgatcgaattgttctgaaacttcccaaaaaaatcagaaaaaattcaaggatcatga 8155209  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| || |||| |||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  8155210 ctcccgtacaaggaacttcttacgggactccgcccctcaaaatccaaaattccattgtttagac 8155273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 36468515 - 36468324
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||| |||||||||| ||||||  |||||||||||||||||||||||    
T  36468515 cttcataactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 36468416  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||  ||| |||||||  |||||| |  ||||||||| || |||||||||||||||||| || ||||||| ||||||||||||    
T  36468415 agaaaatcagaaaa--ttcgaggaccacgactccctttaaagggacttcttacgggactccgcccctcaagattcaaaatttcatcgtttagac 36468324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 24042097 - 24041982
Alignment:
Q  76 tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaa 175  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  |||  ||||||| || |||||||||||||||||||||||||    
T  24042097 tcggactgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcctgtag-tgggacttcttacgggactccgcccctcaaaatccaa 24041999  T
Q  176 aattccatcgtttagac 192  Q
    || ||||||||||||||    
T  24041998 aactccatcgtttagac 24041982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 42865080 - 42864886
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  |||||| || ||||||| ||  |||||  ||||||||||||||||  ||||||||||| ||||| |||||    
T  42865080 cttcctaactctcatccttctgttttgggtcattgtcacctgttcttggtcaaaaatcaggttttcggactacttgatcggattgctctgaaacatcccc 42864981  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatag-aagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| ||||| |||||||||||||| |||||| ||| ||| ||||| ||  ||||||||||||||||||||||||||||| |||||||||||    
T  42864980 agaaaattagaaacaattcaaggaccatgactcccttagaaagagacttcttatgggactccgcccctcaaaatccaaaattcaatcgtttagac 42864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 33573991 - 33573833
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| |||| ||| |  ||||||||||||||| |||||||  ||||||||||| |||||||||||| |||||||||||||||||||     || |    
T  33573991 cattgttacatgtttttaatcaaaaattgggttttcgaactacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcaa-----atga 33573897  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||| | ||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||    
T  33573896 ctcctaaagaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttagac 33573833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 33151414 - 33151555
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||  ||||||||||  |||||||||||||| ||||||||  |||||||  ||||||||||||| |||||||||||||||||||||||||||| |    
T  33151414 cattgttatctgttcttagtcaaaaattgggttttctgactacttgatcggattattccgaaacttccc-agaaaatcagaaaaaattcaaggaccatga 33151512  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaat 171  Q
    ||||| |||||||||||| || ||||||||| ||| |||||||    
T  33151513 ctcccttagaagggacttcttacgggactccacccttcaaaat 33151555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 7115218 - 7115054
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaat-tcaaggaccatc 127  Q
    |||||||| |||||||||||  ||||| | |||||||| ||||||  ||| ||||||| ||||||||| |||||||||||||||||  ||||||| ||      
T  7115218 cattgttagttgttcttagtcaaaaatcgtgttttcgggctacttgatcgtattgctctgaaacttcctcagaaaatcagaaaaaaaatcaaggatcaag 7115119  T
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||||||||| || |||||||||  |||||||||||||||||||||| ||||||||    
T  7115118 actcccttagaagggacttcttacgggactccttccctcaaaatccaaaattccattgtttagac 7115054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 3304736 - 3304536
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| ||||||  ||||||  |||||||  ||||||||| ||||||||||  ||||| ||||| |||| ||||||  ||||||||||| ||||||||||     
T  3304736 cttcctaactcttatcattttgttttgggtcattgttacctgttcttagtcaaaaatcgggttctcgggctacttgatcggattgctctgaaacttccca 3304637  T
Q  99 agaaaatcagaaaaaat-------tcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    | ||||||| ||||||        ||||||||||| |||||  |||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||    
T  3304636 aaaaaatcaaaaaaaaaaaaaaaatcaaggaccatgactcctctagaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttaga 3304537  T
Q  192 c 192  Q
    |    
T  3304536 c 3304536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 36408573 - 36408732
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  |||||| ||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||||||||    
T  36408573 gttttgggtcattgttacgtgttcttagtcaaaaatttggttttcggactacttgatcggattgctccgaaacttctccaaaaaatcagaaaaaattcaa 36408672  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtt 187  Q
    ||||||  | ||       || ||||| |  ||||| |||||||||||||||||||||||||||||||    
T  36408673 ggaccaaaattc-------agagacttcta-cgggagtccgcccctcaaaatccaaaattccatcgtt 36408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 24690250 - 24690122
Alignment:
Q  62 ttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactcc 159  Q
    ||||||| ||||||  |||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||| |   |||||||| || | |||||      
T  24690250 ttttcgggctacttgatcggattgctccgaaacttctccataaaatcagaaaaaattcaaggatcatgactccctt---agggacttcttacaggacttt 24690154  T
Q  160 gcccctcaaaatccaaaattccatcgtttaga 191  Q
     |||||||||||||||||||| ||||||||||    
T  24690153 acccctcaaaatccaaaattcaatcgtttaga 24690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 26555105 - 26555012
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaagga 122  Q
    ||||||||| ||||||||||  ||||  |||||||||| ||||||  ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  26555105 cattgttacatgttcttagtaaaaaaacgggttttcgggctacttgatcggattgctctgaaactttcccagaaaatcagaaaaaattcaagga 26555012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 36946270 - 36946078
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattg-ggttttcggactactt--tcggattgctccgaaacttccc 97  Q
    |||| |||||| |||| ||  |||||||  |||||||| ||||| ||||| |||||||  |||||||||  |||||  ||| |||||| |||||||||||    
T  36946270 cttcctaactctcatccttttgttttgggtcattgttagttgttattagt-caaaattctggttttcgggatacttgatcgaattgcttcgaaacttccc 36946172  T
Q  98 cagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    ||||||| ||| ||||| ||||||| ||  |||||||||||||  |||| |  | ||||||||| ||| |||||||||||||||||| ||||||    
T  36946171 cagaaaaccaggaaaaaatcaaggatcaaaactcccatagaagcaacttctaactggactccgcaccttaaaatccaaaattccatcatttaga 36946078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 43186042 - 43186157
Alignment:
Q  79 gattgctccgaaacttccccagaaaatcagaa----aaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatcca 174  Q
    |||||||| |||| || | |||||||||||||    |||| ||||||| ||  |||||| |||||||||||| || ||||||||||||||| ||||||||    
T  43186042 gattgctctgaaattttcacagaaaatcagaagaagaaaaatcaaggatcaagactcccttagaagggacttcttacgggactccgcccctaaaaatcca 43186141  T
Q  175 aaattccatcgtttag 190  Q
    ||||||||||||||||    
T  43186142 aaattccatcgtttag 43186157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 31985490 - 31985302
Alignment:
Q  6 taactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaa 103  Q
    |||||| |||||||  |||||||  ||||||||   |||||||||  |||||  |||||| || ||||||  || ||||| ||| |||||| |  | |||    
T  31985490 taactctcatcattctgttttgggtcattgttaaccgttcttagtcaaaaatctggtttttgggctacttgatcagattgttccaaaactttcttacaaa 31985391  T
Q  104 atcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||| ||||||| ||| |||| ||||||||||| || || | |||||| |||||||||| |||||||||| |||||||||||    
T  31985390 atcagaaaaaactcaaggatcatgactctcatagaagggatttcttacaggactctgcccctcaaactccaaaattcaatcgtttagac 31985302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 191
Target Start/End: Original strand, 1518919 - 1519087
Alignment:
Q  32 attgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcag-------aaaaaattcaagga 122  Q
    |||||||  ||||||||||  ||||| |||||||||||||||||  ||||||||||||||||||| || |||||| |||       |||||| |||||||    
T  1518919 attgttagctgttcttagtaaaaaatagggttttcggactacttgatcggattgctccgaaactttcctagaaaaacagaaagaaaaaaaaaatcaagga 1519018  T
Q  123 ccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
     ||  | |||| ||||||||||||  |  | |||||||| |||||||||| ||||||||||||||||||    
T  1519019 tcaagattcccgtagaagggacttcctatgtgactccgctcctcaaaatctaaaattccatcgtttaga 1519087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 28230368 - 28230277
Alignment:
Q  101 aaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||| |||||||||| |||||| ||||| |  ||| ||  |||||||| |||||||||||| |||||||||||||||||||    
T  28230368 aaaatcagaaaaaatacaaggaccatgactcccttagaaagaccttattatgggactccacccctcaaaatctaaaattccatcgtttagac 28230277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 16278323 - 16278387
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||||||||| || ||||||||||| | ||||||||||||||| ||||||||||||    
T  16278323 actcccttagaagggacttcttacgggactccgcacatcaaaatccaaaatttcatcgtttagac 16278387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 6467088 - 6466922
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcag----aaaaaattcaaggacc 124  Q
    ||||||||  ||||||||||  |||||| ||| ||| | ||||||  |||||||| || |||| ||||| ||||||||||    |||||| ||||||| |    
T  6467088 cattgttagctgttcttagttaaaaatttggtattccggctacttgatcggattgttctgaaatttccctagaaaatcaggaataaaaaaatcaaggatc 6466989  T
Q  125 atcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |  ||||| |||||||  |||| ||  ||||||||||||||||||||| |||||| ||||||||||||    
T  6466988 aagactcctatagaagt-acttcttatgggactccgcccctcaaaatctaaaatttcatcgtttagac 6466922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 3936319 - 3936407
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccag-aaaatcagaaaaaatt 116  Q
    ||||||||| | ||||||||  ||||| || |||||||||| |||  ||||||||||||||||||||||||| |||||| |||||||||    
T  3936319 cattgttacctattcttagtcaaaaatcggattttcggactgcttgatcggattgctccgaaacttccccagaaaaatccgaaaaaatt 3936407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 48705896 - 48705784
Alignment:
Q  80 attgctccgaaacttccccagaaaatcagaaaaaattcaagga-ccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaat 178  Q
    |||| |||||||||| |||| ||||||  |||||||||||| | |||  | |||| |||||||||||| ||   ||||||||||||||||| ||||||||    
T  48705896 attgttccgaaactttcccaaaaaatcttaaaaaattcaagaatccagga-tcccgtagaagggacttcttataggactccgcccctcaaattccaaaat 48705798  T
Q  179 tccatcgtttagac 192  Q
    | ||||||||||||    
T  48705797 ttcatcgtttagac 48705784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 26554988 - 26554948
Alignment:
Q  152 gggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  26554988 gggactctgcccctcaaaatccaaaattccatcgtttagac 26554948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 37398869 - 37398754
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||||||  ||||| |  |||||||| |||||||||||  |||||| ||||||  | ||||||  || |||||||||||||||||||     
T  37398869 cttcctaactctcatcattctgttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaaacttccct 37398770  T
Q  99 agaaaatcagaaaaaa 114  Q
    |||||||||| |||||    
T  37398769 agaaaatcaggaaaaa 37398754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 8214442 - 8214379
Alignment:
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||||||||| || || |||| ||||||||| |||||||||||||||| |||||||    
T  8214442 ctcccttagaagggacttcttacgagacttcgcccctcacaatccaaaattccatcttttagac 8214379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 47239560 - 47239505
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttag 190  Q
    |||||||||||| || ||||||| |||| |||||||||||||||| ||||||||||    
T  47239560 tagaagggacttcttacgggacttcgcctctcaaaatccaaaatttcatcgtttag 47239505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 5731127 - 5731064
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||||||||| || || |||||| ||| |||||||||||||||||||| |||||||    
T  5731127 actcccttagaagggacttcttacgagactccaccc-tcaaaatccaaaattccatcatttagac 5731064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 5e-56; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 11698294 - 11698101
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| || |||||| |  ||||||||  ||||||||||  ||||| |||||||||| ||||||  ||||| |||||||||||||||||    
T  11698294 cttcctaactctcatccttccgtttttggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggaatgctccgaaacttcccc 11698195  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  11698194 agaaaatcagaaaaaattcaaggaccatgactcccatagaagggacgtcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 11698101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 8885400 - 8885237
Alignment:
Q  32 attgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaa-ttcaaggaccatca 128  Q
    |||||||| ||||||||||  ||||| |||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||| |||||||||||| |    
T  8885400 attgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacattcccagaaaatcagaaaaaaattcaaggaccatga 8885301  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||||||||| || | |||||||||||||||||||||||||||||||| |||||||    
T  8885300 ctcccgtagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcatttagac 8885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 3094866 - 3095059
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||| | |||||||||||||||  ||||||||||||||||||| |||    
T  3094866 cttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcggactacttgatcggattgctccgaaacttgccc 3094965  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||  || || |||||| ||||||||||||||||||| ||||||||||||    
T  3094966 agaaaatcataaaaaattcaaggaccatgactcccataggagggactacttacgcgactccacccctcaaaatccaaaatttcatcgtttagac 3095059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 42280869 - 42280676
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||| || |||| |||||||||  ||||||| || ||||||||||||    
T  42280869 cttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcggatttttggactacttgatcggattacttcgaaacttcccc 42280770  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||| ||||| |||||||||||| |||||| |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  42280769 agaaaatcaaaaaaagttcaaggaccataactcccctagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagac 42280676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 53 - 192
Target Start/End: Original strand, 28917009 - 28917149
Alignment:
Q  53 aaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttg 150  Q
    ||||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| ||     
T  28917009 aaaatcgggttttcg-actacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttctta 28917107  T
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
     |||||||||||||||||||||||||||||||| ||||||||    
T  28917108 tgggactccgcccctcaaaatccaaaattccattgtttagac 28917149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 31519840 - 31519679
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||||  ||||||||||| |||||||||||| |||||||||||||||||||||||||| |    
T  31519840 cattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccataaaatcagaaaaaattcaaggaccatga 31519741  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    | ||| |||||||||| | || ||||||||  ||||||||||||||||||||||| ||||||||    
T  31519740 cacccttagaagggacgtcttacgggactc--cccctcaaaatccaaaattccattgtttagac 31519679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 34853509 - 34853702
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgca-aaattgggttttcggactactt--tcggattgctccgaaacttccc 97  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||| ||| |||| | ||||||||| |||||  ||||||||||||||||||||||    
T  34853509 cttcctaactctcatccttctgttttgggtcattgttacctgttcttag-gcagaaatcgagttttcggattacttgatcggattgctccgaaacttccc 34853607  T
Q  98 cagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    || |||||||||||||||||||||||||| |||||| ||||| |||||| ||  ||||||||||||||||||||  |||||||||||||||||||    
T  34853608 cataaaatcagaaaaaattcaaggaccatgactcccttagaaaggacttcttctgggactccgcccctcaaaataaaaaattccatcgtttagac 34853702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 40328109 - 40328266
Alignment:
Q  32 attgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaa-aattcaaggaccatca 128  Q
    |||||||| ||||||||||  ||||| |||||||||||||||||  |||||||||||| ||||||||| |||||||||||||| |||||||||| ||| |    
T  40328109 attgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaaaacttccctagaaaatcagaaaaaaattcaaggatcatga 40328208  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtt 187  Q
    ||||| || |||  |||| || ||||||||||||||||||||||| |||||||||||||    
T  40328209 ctcccgtaaaagaaacttcttacgggactccgcccctcaaaatcc-aaattccatcgtt 40328266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 27927919 - 27927735
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  |||||||||||||||||||||||  || ||||||||||||||||||||    
T  27927919 cttcctaactctcatccttctgttttgggtcattgttacctgttcttagttaaaaattgggttttcggactacttgatcagattgctccgaaacttcccc 27927820  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    | |||||||||||||||||||||||||| |||| |         |||| || ||||||||| |||||| |||||||||||| ||||||||||||    
T  27927819 ataaaatcagaaaaaattcaaggaccatgactctc---------acttcttacgggactccacccctccaaatccaaaatttcatcgtttagac 27927735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 14164005 - 14163842
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  |||| || ||||||||  |||||  |||| |||||||||||| |||||||||||||||||||||||||||||||||      
T  14164005 cattgttacctgttcttagtcaaaaactgcgttttcggggtacttgatcggtttgctccgaaacctccccagaaaatcagaaaaaattcaaggaccatgg 14163906  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| || ||   |||| || |||||||||||||||||||||  ||||||||||| |||||||    
T  14163905 ctcccttataaataacttcttacgggactccgcccctcaaaataaaaaattccatcatttagac 14163842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 17119857 - 17119665
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||| ||||||||| ||||||||||  ||||  |||||||||||||||||  | ||||| |||||||||||||||    
T  17119857 cttcctaactctcatccttctgttttggatcattgttacctgttcttagtcaaaaaccgggttttcggactacttgattggatttctccgaaacttcccc 17119758  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    || |||| |||||||| ||||||| ||| |||||| ||||||  |||| || |||| |  | ||||||||||||||||||| ||||||||||||    
T  17119757 aggaaattagaaaaaaatcaaggatcattactcccgtagaagatacttcttacggg-caacacccctcaaaatccaaaatttcatcgtttagac 17119665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 36980811 - 36980943
Alignment:
Q  62 ttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactcc 159  Q
    ||||||| ||||||  ||||||||||||||||||||| ||||||||||| ||||| ||||||| ||  |||||| |||||||||||| || | |||||||    
T  36980811 ttttcgggctacttgatcggattgctccgaaacttccacagaaaatcaggaaaaaatcaaggatcaagactcccctagaagggacttcttacaggactcc 36980910  T
Q  160 gcccctcaaaatccaaaattccatcgtttagac 192  Q
    || ||||||||| |||||| |||||||||||||    
T  36980911 gctcctcaaaattcaaaatcccatcgtttagac 36980943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 9073697 - 9073808
Alignment:
Q  13 catcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaa 110  Q
    |||| ||| |||||||  ||||||||| ||||||||||  ||||| ||||||| |||||||||  | ||||||||||||||||||| |||||||||||||    
T  9073697 catccttatgttttgggtcattgttacctgttcttagtcaaaaatcgggtttttggactacttgattggattgctccgaaacttcctcagaaaatcagaa 9073796  T
Q  111 aaaattcaagga 122  Q
    ||||||||||||    
T  9073797 aaaattcaagga 9073808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 36165816 - 36165681
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttc-ggactactt--tcggattgctccgaaacttccc 97  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||  |||||||  || ||||||  ||||||||||||||||||||||    
T  36165816 cttcttaactctcatccttctgttttgggtcattgttacatgttcttagttaaaaaccgggttttttgggctacttgatcggattgctccgaaacttccc 36165717  T
Q  98 cagaaaatcagaaaaaattcaaggaccatcactccc 133  Q
    ||||||||||||||||||||||||||||| ||||||    
T  36165716 cagaaaatcagaaaaaattcaaggaccatgactccc 36165681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 44106434 - 44106585
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| |||||||||  ||||||  || |||||||| |||||||||||| ||||| | |||||| ||||||||||| |    
T  44106434 cattgttacctgttcttagtcaaaaatcgggttttcgtgctacttgatctgattgctctgaaacttccccataaaataaaaaaaaaatcaaggaccatga 44106533  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattc 180  Q
    ||||| ||||||   ||| ||  ||||||| | |||||||||||||||||||    
T  44106534 ctcccttagaagttccttcttatgggactctgtccctcaaaatccaaaattc 44106585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 7981772 - 7981890
Alignment:
Q  76 tcggattgctccgaaacttccccagaaaatcag--aaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatcc 173  Q
    |||||||||| |||||||||| | |||||||||  |||||| ||||| | ||  |||||| ||||||||| || ||   ||||| |||||||||||||||    
T  7981772 tcggattgcttcgaaacttcctccgaaaatcaggaaaaaaaatcaagcatcaagactcccttagaagggatttgttataggacttcgcccctcaaaatcc 7981871  T
Q  174 aaaattccatcgtttagac 192  Q
    |||||||||||||||||||    
T  7981872 aaaattccatcgtttagac 7981890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 28423640 - 28423785
Alignment:
Q  40 ttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaat-tcaaggaccatcactcccata 136  Q
    |||||||||||  |||||| | ||||||| ||||||  ||||||| |||||||||||  ||||||||| | ||||||| ||||||| ||  |||||| ||    
T  28423640 ttgttcttagtcaaaaattagtttttcgggctacttgatcggattactccgaaacttagccagaaaattaaaaaaaatatcaaggatcaagactcccgta 28423739  T
Q  137 gaagggactttttgcgggactccgcccctcaaaatccaaaattcca 182  Q
    ||| |||||| ||  ||||||||  |||||||||||||||||||||    
T  28423740 gaaaggacttcttatgggactccatccctcaaaatccaaaattcca 28423785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 40994980 - 40995046
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagacac 194  Q
    |||||| ||||||||| || || |||||||||||| |||||||||||||||||||||||||||||||    
T  40994980 actcccgtagaagggatttattacgggactccgcctctcaaaatccaaaattccatcgtttagacac 40995046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 10840654 - 10840538
Alignment:
Q  81 ttgctccgaaacttccccagaaaatcagaa-----aaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaa 175  Q
    ||||||||||||||||||||||||||||||     ||||  |||||| ||| |||||| |||||||   || || ||||||||| ||||||||||| |||    
T  10840654 ttgctccgaaacttccccagaaaatcagaagaaaaaaaaaccaaggatcatgactcccgtagaaggatattcttacgggactccacccctcaaaattcaa 10840555  T
Q  176 aattccatcgtttagac 192  Q
    ||| ||||| |||||||    
T  10840554 aatcccatcttttagac 10840538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 31234671 - 31234606
Alignment:
Q  128 actcccatagaagggacttttt--gcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||||    
T  31234671 actcccttagaagggacttcttacgcgggactccgccc-tcaaaatccaaaattccatcgtttagac 31234606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 33472287 - 33472351
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||| ||||| || ||||||| ||||||||||||| ||||||| ||||||||||||    
T  33472287 actcccttagaagagacttcttacgggactacgcccctcaaaattcaaaatttcatcgtttagac 33472351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 4259508 - 4259467
Alignment:
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  4259508 cgggactccgcccctcaaaatccaaaattctatcctttagac 4259467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 10833457 - 10833397
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    |||||| ||||||||||||||| | |||||||| || ||||||||||||||| |||||||||    
T  10833457 actcccttagaagggactttttacaggactccg-ccatcaaaatccaaaatttcatcgttta 10833397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 9073852 - 9073892
Alignment:
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    |||||||| ||||||||||||||||||||| ||||||||||    
T  9073852 cgggactcagcccctcaaaatccaaaattctatcgtttaga 9073892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 21004586 - 21004692
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaa-tcagaaaaaattca 118  Q
    |||||||  ||||||||| ||||||||||  ||||| |||||||| | ||||||  || |||||||| |||||||| ||| |||| |||||||| |||||    
T  21004586 gttttgggtcattgttacatgttcttagtcaaaaatcgggttttccggctacttgatcagattgctctgaaacttctccaaaaaaatcagaaaa-attca 21004684  T
Q  119 aggaccat 126  Q
    ||||||||    
T  21004685 aggaccat 21004692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 36318007 - 36318170
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||  ||||||||||   ||||| | ||||||| ||||||  |||||| | ||| |||||| |||||||||| || |||||  |||||| ||  |    
T  36318007 cattgttagctgttcttagtcagaaattcgattttcgggctacttgatcggatagttccaaaactttcccagaaaattaggaaaaaaacaaggatcaaga 36318106  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    || || |||||  ||||| ||  | |||||| |||||||||||  |||||||||||||||||||    
T  36318107 ctaccttagaaatgacttcttatgagactccacccctcaaaatttaaaattccatcgtttagac 36318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 9845414 - 9845466
Alignment:
Q  141 ggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagaca 193  Q
    |||||| || |||||||||  ||||||||||  ||||||||||||||||||||    
T  9845414 ggacttcttacgggactccatccctcaaaatttaaaattccatcgtttagaca 9845466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 5e-56; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 54631470 - 54631277
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||| |||||||||||||||||  |||||||||||| ||||||||||    
T  54631470 cttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaaaacttcccc 54631371  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| || ||||||||||| ||||||||| ||||||||||||||||||||    
T  54631370 agaaaatcagaaaaaattcaaggaccatgactcccatagaaaggacttcttacgggactccgcacctcaaaatacaaaattccatcgtttagac 54631277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 53 - 194
Target Start/End: Complemental strand, 46440198 - 46440055
Alignment:
Q  53 aaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttg 150  Q
    ||||| || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||     
T  46440198 aaaatcggattttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccaaagaagggacttctta 46440099  T
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagacac 194  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  46440098 cgggactccgcccctcaaaatccaaaatttcatcgtttagacac 46440055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 7931866 - 7932040
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| |||| || ||  ||||| | |||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||    
T  7931866 gttttgggtcattgttacatgtttttggtcaaaaatcgagttttcggactacttggtcggattgcttcgaaactttcccagaaaatcagaaaaaattcaa 7931965  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagacac 194  Q
    ||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  7931966 ggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacac 7932040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 25752390 - 25752228
Alignment:
Q  32 attgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcac 129  Q
    |||||||| ||||||||||  ||||| |||||||||| ||||||  || |||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  25752390 attgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcagattgctccgaaacttccccagaaaatcagaaaagattcaaggaccatgac 25752291  T
Q  130 tcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||| |||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  25752290 tcccttagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 25752228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 19835739 - 19835902
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| |||| |||||  ||| | |||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||| |    
T  19835739 cattgttacctgtttttagtcaaaagtcgggttttcggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaagtaccatga 19835838  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| || ||||||||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  19835839 ctcccctaaaagggacttcttacgggactccgcccctcaaaatccaaaattccattgtttagac 19835902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 25491373 - 25491180
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||| ||||||| |||||||||  |||||||||||| ||| ||||||    
T  25491373 cttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggtttttggactacttgatcggattgctccaaaatttcccc 25491274  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||||| |   |||| |||| |||||||||||||||||||||||||||||||    
T  25491273 agaaaatcagaaaaagttcaaggaccatgactcccttagaagggacttctcaagggattccgtccctcaaaatccaaaattccatcgtttagac 25491180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 48319042 - 48318849
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||  | ||||||||  ||||| || ||||||||||||||  |||||||||| ||||| ||||||    
T  48319042 cttcctaactctcatccttctgttttgggtcattgttatctattcttagtaaaaaatcggattttcggactacttgatcggattgcttcgaaatttcccc 48318943  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| |||| | | |||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  48318942 agaaaatcagaaaaaattcaaggaccatgactctcctggaagggacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagac 48318849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 18051106 - 18050974
Alignment:
Q  62 ttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactcc 159  Q
    ||||||||||||||  || |||||||||||||||| |||||||||||| |||||| ||||||||||| |||||| ||||||| ||||||| ||||| |||    
T  18051106 ttttcggactacttgatcagattgctccgaaactttcccagaaaatcaaaaaaaaatcaaggaccatgactcccgtagaaggaactttttacgggattcc 18051007  T
Q  160 gcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||||||||    
T  18051006 gcccctcaaaatccaaaattccatcgtttagac 18050974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 29822790 - 29822962
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| |||||||| |  |||||||| ||||||| ||||||  |||||||||||  |||||| |||||| |||||||||||||||||    
T  29822790 gttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaacttgcccagacaatcagaaaaaattcaa 29822889  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| |||||| ||||||||||||  | |||||||| |||||||||||| ||||||||||||||||||||    
T  29822890 ggaccatgactcccgtagaagggacttcctacgggactctgcccctcaaaattcaaaattccatcgtttagac 29822962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 53893982 - 53893811
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  ||||| |||||||| ||||||||  ||||||||||| |||||||||  ||||||||||||||||||  |    
T  53893982 gttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttccg-agaaaatcagaaaaaatttca 53893884  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||| |||||||||||| ||  ||| |||||||||||||||||||||||| ||||||||||||    
T  53893883 ggaccatcactcccgtagaagggacttcttatgggtctccgcccctcaaaatccaaaatttcatcgtttagac 53893811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 34973083 - 34973246
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||  ||||||||||  ||||| |||||||| ||||||||  ||||||||||| |||||||||| | ||||| |||||||||||||||||||| |    
T  34973083 cattgttatctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttccctataaaattagaaaaaattcaaggaccatga 34973182  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||| | || ||||||||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  34973183 ctctcctaaaagggacttctttcgggactccgcccctcaaaatccaaaattccattgtttagac 34973246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 40703853 - 40704043
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||  | ||||||||  ||||| ||||||| |||||||||  ||||||||||  |||||||||||    
T  40703853 cttcctaactctcatccttctgttttgggtcattgttatcttttcttagtcaaaaatcgggtttttggactacttgatcggattgctaagaaacttcccc 40703952  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    |||||||||||||||||||||||||||| ||| |  ||||||| |||| || |||||||||||||||||||||| ||||||||||||||||    
T  40703953 agaaaatcagaaaaaattcaaggaccatgacttcattagaaggaacttcttacgggactccgcccctcaaaatctaaaattccatcgttta 40704043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 25538926 - 25538761
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| | ||||||||  |||||| ||||||| | ||||||  | ||||| ||||||||| |||||||||||||||||||| |||||||| ||| |    
T  25538926 cattgttacctcttcttagtcaaaaatttggttttcaggctacttgattggatttctccgaaacatccccagaaaatcagaaaaatttcaaggaacatga 25538827  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagacac 194  Q
    ||||| |||||| ||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  25538826 ctcccttagaagagacttcttacgggactccgcccctcaaaatccaaaataccatcgtttagacac 25538761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 52089404 - 52089541
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| ||||||| |||||||||  |||||||||| | |||||||||||||||||||||||||||||||||||||| |    
T  52089404 cattgttacctgttcttagtcaaaaatcgggtttttggactacttgatcggattgcttcaaaacttccccagaaaatcagaaaaaattcaaggaccataa 52089503  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctc 166  Q
    ||| |||||||||||||| || ||||||||||||||||    
T  52089504 ctctcatagaagggacttcttacgggactccgcccctc 52089541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 6003630 - 6003458
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||||||||||||||  |||||  ||||||||| ||||||  | ||||||||| ||||||| |||| |||||||||||||||||||    
T  6003630 gttttgggtcattgttacttgttcttagtcaaaaatcaggttttcgggctacttgattggattgctctgaaactttcccaaaaaatcagaaaaaattcaa 6003531  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
     |||||| ||| ||||| ||||| ||| || |||||||||||||||||||||||||||||| || ||||||||    
T  6003530 agaccatgacttccataaaaggggcttcttacgggactccgcccctcaaaatccaaaattctattgtttagac 6003458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 6228770 - 6228598
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  |||||||||||||||| ||| ||  |||||||||||  ||||||||| | |||||||||||||||||||    
T  6228770 gttttgggtcattgttacctgttcttagtcaaaaattgggttttcgggctatttgatcggattgctctaaaacttcccaaaaaaatcagaaaaaattcaa 6228671  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    | ||||| |||||| ||||||| |||| || | ||||||| ||||||||||||||||||||||| ||||||||    
T  6228670 gaaccatgactcccgtagaaggaacttcttacaggactcctcccctcaaaatccaaaattccattgtttagac 6228598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 38536390 - 38536553
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  |||||   |||||| | ||||||  |||||||| ||| |||||| ||||||||||||||||||||||||||||||| |    
T  38536390 cattgttacatgttcttagtcaaaaatcaagttttcaggctacttgatcggattgttccaaaactttcccagaaaatcagaaaaaattcaaggaccataa 38536489  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||  ||||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  38536490 ctcctttagaaaggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagac 38536553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 2505988 - 2505819
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  | ||| |||||||||| ||||||  ||||||||||||||||||| | ||||||| ||||||| ||||||    
T  2505988 gttttgggtcattgttacatgttcttagtcaataatcgggttttcgggctacttgatcggattgctccgaaactttctcagaaaagcagaaaacattcaa 2505889  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||||||| ||||||  ||||||||||| || ||||| || ||||||||||||||||||||| ||||||||    
T  2505888 ggaccatgactccccaagaagggacttcttacgggattctgcccctcaaaatccaaaattctatcgttta 2505819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 191
Target Start/End: Original strand, 32442020 - 32442191
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  ||||| | |||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  32442020 gttttgggtcattgttacctgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctctgaaacttccccagaaaatcagaaaaaattcaa 32442119  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    ||||||| |||||| |||||| ||||| ||  |||| | |||||||||||||  |||||| ||| |||||||    
T  32442120 ggaccatgactcccttagaagagacttcttatgggatttcgcccctcaaaataaaaaatttcattgtttaga 32442191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 52089541 - 52089628
Alignment:
Q  97 ccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatc 184  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  52089541 ccagaaaatcagaaaaaattcaaggaccataactcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattccatc 52089628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 17933115 - 17932922
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  |||||  | ||||| ||| ||||  |||||||||||||||||||| ||    
T  17933115 cttcctaactctcatccttctgttttgggtcattgttacctgttcttagtaaaaaatcagattttcagaccacttgatcggattgctccgaaacttctcc 17933016  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| |||||| ||||| | |||| ||  | || |||||| |||||||||||||||||||| ||||||||    
T  17933015 agaaaatcagaaaaaattcaaggaccatgactcccttagaaagaacttcttaagagattccgcctctcaaaatccaaaattccatagtttagac 17932922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 43 - 191
Target Start/End: Complemental strand, 27742049 - 27741899
Alignment:
Q  43 ttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaag 140  Q
    ||||||||  ||||| |||||||||| ||||||  ||||||||||||||||| ||||| |||||||||||||||||  |||| |||  ||||| ||||||    
T  27742049 ttcttagtcaaaaatcgggttttcgggctacttaatcggattgctccgaaacatcccccgaaaatcagaaaaaattggaggatcatgcctcccgtagaag 27741950  T
Q  141 ggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    | |||| ||  |||||||||||||||||||||||||||||||| |||||||    
T  27741949 gaacttcttatgggactccgcccctcaaaatccaaaattccattgtttaga 27741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 191
Target Start/End: Original strand, 8106613 - 8106775
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| |||||||| |  |||||  |||||| || ||||||  || |||| |||||||||||||||| |||||||||||||||||||||| ||| |    
T  8106613 cattgttacctgttcttattcaaaaatcaggtttttgggctacttgatcagattactccgaaacttccccaaaaaatcagaaaaaattcaaggatcatga 8106712  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    ||||| ||||||| |||| || |||||||||||| ||||||||| ||||||  ||||||||||    
T  8106713 ctcccgtagaaggaacttcttacgggactccgcctctcaaaatcaaaaattaaatcgtttaga 8106775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 49397231 - 49397393
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| |||||||||  ||||||  ||||||||||| |||||||||| | |||||||||||||||||||||||||| |    
T  49397231 cattgttacatgttcttagtcaaaaatcgggttttcgagctacttgatcggattgctctgaaacttcccaa-aaaatcagaaaaaattcaaggaccatga 49397329  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||  |||||  |||| ||  |||| || |||||||||||||||||||| ||| ||||||||    
T  49397330 ctccctaagaagaaacttcttatgggattcggcccctcaaaatccaaaatttcattgtttagac 49397393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 192
Target Start/End: Original strand, 38417020 - 38417173
Alignment:
Q  40 ttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatag 137  Q
    |||||||||||  ||||| |||||||||  ||||||  ||||| |||||  ||||||||||| ||||| |||||| ||||||||||||| |||| | |||    
T  38417020 ttgttcttagtcaaaaatcgggttttcgagctacttgatcggagtgctctaaaacttccccaaaaaattagaaaa-attcaaggaccatgactcacgtag 38417118  T
Q  138 aagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||| || | ||||||||||| ||||||||||||||| ||||||||||||    
T  38417119 aagggacttcttacaggactccgcccttcaaaatccaaaatttcatcgtttagac 38417173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 41323040 - 41322878
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    |||||||| |||||||||||  ||||||| ||||||||  |||||  |||||||||||||||| ||||||||||||||| |||||||||| ||| ||  |    
T  41323040 cattgttaattgttcttagttaaaaattgagttttcggcatacttgatcggattgctccgaaagttccccagaaaatcataaaaaattcacggatcaaga 41322941  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
     ||   |||||| ||||| || ||||| ||||||||||||||||| | ||||||||||||||||    
T  41322940 ttcttgtagaagagacttcttacgggattccgcccctcaaaatcc-atattccatcgtttagac 41322878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 49001477 - 49001341
Alignment:
Q  62 ttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaa-----aaaattcaaggaccatcactcccatagaagggactttttgcggg 154  Q
    ||||||| ||||||  |||||||||||||||| ||| ||||||||||||||     ||||  |||||| ||| |||||| |||||||||||| || ||||    
T  49001477 ttttcgggctacttgatcggattgctccgaaaattctccagaaaatcagaagaaaaaaaaaacaaggatcatgactcccttagaagggacttcttacggg 49001378  T
Q  155 actccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  49001377 actccgctcctcaaaatccaaaattacatcgtttaga 49001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 189
Target Start/End: Original strand, 47456831 - 47456984
Alignment:
Q  43 ttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaa-----aaaattcaaggaccatcactcccat 135  Q
    ||||||||  |||||| ||||||||| ||||||  || ||||||||||||||||||||||||||||||||     |||| ||||||| ||  |||||  |    
T  47456831 ttcttagtcaaaaattcggttttcgggctacttgatcagattgctccgaaacttccccagaaaatcagaagaaaaaaaaatcaaggatcaagactcctct 47456930  T
Q  136 agaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||||| ||||| ||  || |||||| ||||||||||||||||||||||||||||    
T  47456931 agaagagacttcttatggaactccgtccctcaaaatccaaaattccatcgttta 47456984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 3703155 - 3703044
Alignment:
Q  77 cggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaa 176  Q
    ||||||||||| ||||||| ||| ||||||| ||||||||||| || ||| |||||| |||||  ||||| ||  ||||||||| || ||||||||||||    
T  3703155 cggattgctccaaaacttctccaaaaaatcaaaaaaaattcaaagatcatgactcccttagaaatgacttcttatgggactccgtccttcaaaatccaaa 3703056  T
Q  177 attccatcgttt 188  Q
    ||||||||||||    
T  3703055 attccatcgttt 3703044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 23524078 - 23524169
Alignment:
Q  101 aaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||| ||  |||||| ||||||||||||||||||||| |||  |||||||    
T  23524078 aaaatcagaaaaaattcaaggaccatgactcccgaagaagggacttattatgggacttcgcccctcaaaatccaaaatttcattatttagac 23524169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 31582379 - 31582215
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  |||||   |||||||| ||| ||  ||||||||||||||||||| |||||||||       ||||||||    
T  31582379 gttttgggtcattgttacatgttcttagtcaaaaatctagttttcgggctaattgatcggattgctccgaaacttgcccagaaaa-------aaattcaa 31582287  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
     |||||| | | || |||||||||||| ||  || | ||||||||||||||||||||||||||||||||||||    
T  31582286 agaccatgatttccttagaagggacttcttttgg-attccgcccctcaaaatccaaaattccatcgtttagac 31582215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 14474113 - 14474000
Alignment:
Q  76 tcggattgctccgaaacttccccagaaaatcag--aaaaaattcaaggaccatcactcccatag-aagggactttttgcgggactccgcccctcaaaatc 172  Q
    |||||||||||||||||||   |||||||||||  |||||| ||||||||      |||||||| ||||||||| || |||||||||||||||||| |||    
T  14474113 tcggattgctccgaaactttttcagaaaatcaggaaaaaaaatcaaggac------tcccataggaagggacttcttacgggactccgcccctcaagatc 14474020  T
Q  173 caaaattccatcgtttagac 192  Q
    ||||||| ||||||||||||    
T  14474019 caaaatttcatcgtttagac 14474000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 372189 - 372300
Alignment:
Q  78 ggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaa 177  Q
    |||||||| |||||||| |||||||| ||| |||||| |||| || ||  ||| || || ||||||||| || ||||||||| ||||||||||| |||||    
T  372189 ggattgctacgaaactttcccagaaactcacaaaaaaatcaaagatcaagacttccttataagggacttcttacgggactcctcccctcaaaattcaaaa 372288  T
Q  178 ttccatcgttta 189  Q
    |  |||||||||    
T  372289 tatcatcgttta 372300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 32601169 - 32601220
Alignment:
Q  141 ggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  32601169 ggacttcttgggggactccgccgctcaaaatccaaaattccatcgtttagac 32601220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 37222162 - 37222346
Alignment:
Q  13 catcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt-tcggattgctccgaaacttccccagaaaatcagaa- 110  Q
    |||||||  |||||||  |||||||| |||||||||||  |||||| |||| ||||  ||||  || ||||||||||||||||   |||||||||||||     
T  37222162 catcattctgttttgggtcattgttagttgttcttagtaaaaaattcggttctcggggtactgatcagattgctccgaaacttttacagaaaatcagaag 37222261  T
Q  111 ----aaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
        |||| ||||| | ||  |||||  ||||||| |||| || || |||||| |||||||||||||||||||||| |||||||||    
T  37222262 aaaaaaaaatcaagaatcaagactcct-tagaaggaacttcttacgagactcctcccctcaaaatccaaaattccaacgtttagac 37222346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 48095704 - 48095647
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||| |||||||||||||||  ||||||||| ||||||||||| ||||||    
T  48095704 tagaagggacttcttgcgggactccgcctttcaaaatccgaaattccatcgattagac 48095647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 20083296 - 20083352
Alignment:
Q  136 agaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||| ||| |||| ||||| ||||||||||||||||||||||||||||||    
T  20083296 agaaggaacttcttgtgggattccgctcctcaaaatccaaaattccatcgtttagac 20083352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 55052566 - 55052484
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaa 111  Q
    ||||||||| ||||||||||  ||||| |  ||||||| ||||||  | |||||||||||||||||||| |||||||||||||    
T  55052566 cattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccctagaaaatcagaaa 55052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 25140657 - 25140597
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    |||||| ||||||| |||| |||||||| ||||||  |||||||||||||||||||||||||    
T  25140657 actcccttagaaggaacttcttgcgggattccgcca-tcaaaatccaaaattccatcgttta 25140597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 42497784 - 42497720
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||| |||||| ||| || | |||||||||||||||||||| |||||| ||| ||||||||    
T  42497784 actcccatggaaggggcttcttacaggactccgcccctcaaaatctaaaatttcattgtttagac 42497720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 192
Target Start/End: Original strand, 47072334 - 47072369
Alignment:
Q  157 tccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||| |||||||||||||||||||    
T  47072334 tccgcccctcaaaatctaaaattccatcgtttagac 47072369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 53836119 - 53836072
Alignment:
Q  142 gactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||||| || |||||||||| ||||||||||||||||||| ||||||||    
T  53836119 gacttcttacgggactccgtccctcaaaatccaaaattctatcgttta 53836072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 5803270 - 5803213
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| |||| ||  |||||||| |||| |||||| ||||||||||||||||||||    
T  5803270 tagaaggaacttcttatgggactccaccccacaaaattcaaaattccatcgtttagac 5803213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 41413046 - 41412962
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaa 113  Q
    ||||||||| |||||||| |  |||||  ||||||||| ||||||  || ||||| || |||||||||||| |||||||||||||    
T  41413046 cattgttacatgttcttaatcaaaaatctggttttcgggctacttgatcagattgttctgaaacttccccaaaaaatcagaaaaa 41412962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 47784254 - 47784291
Alignment:
Q  78 ggattgctccgaaacttccccagaaaatcagaaaaaat 115  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  47784254 ggattgctccgaatcttccccaaaaaatcagaaaaaat 47784291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 47784338 - 47784375
Alignment:
Q  155 actccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  47784338 actcctcccctcaaaatccaaaatttcatcgtttagac 47784375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 48629408 - 48629351
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||| || || || |||||||||||||||  ||||||||||| |||||||    
T  48629408 tagaagggacttcttacgagattccgcccctcaaaatttaaaattccatcatttagac 48629351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 4936547 - 4936507
Alignment:
Q  152 gggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||| |||||||||||||||||| |||| |||||||    
T  4936547 gggactccgtccctcaaaatccaaaatttcatcttttagac 4936507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 40907912 - 40907719
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| ||||||||||| ||  | |||||  ||||||||| |||| |||||  ||||| |||||||||||||||||  |||||||||||||||||||||||    
T  40907912 cttcctaactcccatctttctgctttgggtcattgttacctgttgttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttcccc 40907813  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||| ||| |||| |||| ||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  40907812 agaaaatcagaaaaaattcaaggatcatgactctcataaaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagac 40907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 41584643 - 41584450
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||| |||||||||| ||||||  ||||||||||||||||||| |||    
T  41584643 cttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttgccc 41584544  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||| |||||||||| ||||||||    
T  41584543 agaaaatcagaaaaaattcaaggaccatgactcccatagaagggacttcttacgggactccgcccctcacaatctaaaattccattgtttagac 41584450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 52744821 - 52744628
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||    
T  52744821 cttcctaactctcatccttctgttttgggtcattgttacttgttcttagtcaaaaattgggttttcggactacttgatcggattgctccgaaacttcccc 52744722  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| || |  |||||| || |||||||| ||||||| ||||||||||||    
T  52744721 agaaaatcagaaaaaattcaaggaccatgactctcatagaagggacttcttacaagactccacctctcaaaattcaaaatttcatcgtttagac 52744628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 18583501 - 18583329
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  ||||| |||||||||| ||||||  ||||||||||| |||||||||||| |||||||||| ||||||||    
T  18583501 gttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaacaaattcaa 18583402  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||  ||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  18583401 ggaccacgactcccatagaagagacttcttacgggactccgcccctcaaaatccaaaattccattgtttagac 18583329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 45046828 - 45046636
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||  |||||||||| ||||||  ||||||||||||||||||| |||    
T  45046828 cttcctaactctcatccttctgttttgggtcattgttacctgttcttagttaaaaaccgggttttcgggctacttgatcggattgctccgaaacttgccc 45046729  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    | |||||||||||||||||||||||||| |||||| |||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||    
T  45046728 aaaaaatcagaaaaaattcaaggaccatgactcccttagaagggacttcttatgagactccgcccctcaaaatccaaaattccatcgtttaga 45046636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 34006472 - 34006630
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||| ||| ||||||||||  |||||| ||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  34006472 cattgctacctgttcttagtcaaaaattaggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggatcatga 34006571  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtt 187  Q
    ||||| |||||||||||| || |||||||||| |||||||||||||||||| |||||||    
T  34006572 ctcccgtagaagggacttcttacgggactccgtccctcaaaatccaaaatttcatcgtt 34006630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 189
Target Start/End: Original strand, 23442940 - 23443109
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  ||||| |||||||||||||||||  ||||||||||| |||||||||||| |||||||||||||||||||    
T  23442940 gttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcaa 23443039  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||||||| ||||||||||||| ||||| ||||  ||||| || |||||||||||||||||| || |||||    
T  23443040 ggaccataactcccatagaagagacttcttgcacgactctgctcctcaaaatccaaaattctattgttta 23443109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 28866608 - 28866415
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||| ||  |||||||||||||  |||||||||||||||||||||||    
T  28866608 cttcataactctcatccttctgttttgggacattgttacctgttcttagtcaaaaatcggtatttcggactacttgatcggattgctccgaaacttcccc 28866509  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    | ||||| |||||||||||||||||| | |||||| ||||||| ||||  | ||||||||||||||||||||||||||||| ||||||||||||    
T  28866508 aaaaaattagaaaaaattcaaggaccgtgactcccttagaaggcacttcctacgggactccgcccctcaaaatccaaaatttcatcgtttagac 28866415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 38885415 - 38885587
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||||||||||||||  |||||||||||||||| ||||||  ||||||||||||||||||| |||| ||||| | |||||||||||    
T  38885415 gttttgggtcattgttacttgttcttagttaaaaattgggttttcgggctacttgatcggattgctccgaaactttcccaaaaaataaaaaaaaattcaa 38885514  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    | ||||| |||| | | |||||||||| ||  |||||||||||||||||||| ||||||||||||||||||||    
T  38885515 gcaccataactctcctggaagggacttcttatgggactccgcccctcaaaattcaaaattccatcgtttagac 38885587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 42546169 - 42546341
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggtttt-cggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattca 118  Q
    |||||||  ||||||||  ||||||||||  ||||  ||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||||||||| |    
T  42546169 gttttgggtcattgttatctgttcttagttaaaaaccgggtttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattta 42546268  T
Q  119 aggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||| |||||| ||||||| |||| || |||||||||| |||||||||||||||||||||||||||||||    
T  42546269 aggaccatgactcccttagaaggaacttcttacgggactccg-ccctcaaaatccaaaattccatcgtttagac 42546341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 33611367 - 33611195
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  ||||| |||||||||| ||||||  ||||||||||| |||||||||||| ||||||||||||||||| |    
T  33611367 gttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcga 33611268  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| | ||| ||||| ||||||||| || ||||||| || |||||||||||||||||||||| ||||||||    
T  33611267 ggaccgtgacttccataaaagggacttcttacgggactacgtccctcaaaatccaaaattccattgtttagac 33611195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 24472726 - 24472613
Alignment:
Q  78 ggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaa 177  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  24472726 ggattgctccgaaacttccccagaaaatcagaaaaaat-caaggatcaagactcccatagaagggacttcttgcgggactccgcccttcaaaatccaaaa 24472628  T
Q  178 ttccatcgtttagac 192  Q
    || ||||||||||||    
T  24472627 tttcatcgtttagac 24472613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 27795032 - 27795204
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  || || ||||||| || ||||||  ||||||||||||||||||||| ||||||||||||||||||||||    
T  27795032 gttttgggtcattgttacctgttcttagtcaaacatcgggtttttgggctacttgatcggattgctccgaaacttccacagaaaatcagaaaaaattcaa 27795131  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||| ||| ||||   |||||| ||||| || | ||||||||||||||||||||||||||| ||||||||||||    
T  27795132 ggatcatgactcttgtagaagagacttcttacaggactccgcccctcaaaatccaaaatttcatcgtttagac 27795204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 191
Target Start/End: Complemental strand, 6223699 - 6223539
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| |||||||||| ||||||  ||||||||||| ||||||| |||||||||||||||||| |||||||| ||| |    
T  6223699 cattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactttcccagaaaatcagaaaaa-ttcaaggatcatga 6223601  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    ||||| |||||| ||||| || ||| || ||||||||||||||||||||||||||||||||||    
T  6223600 ctcccttagaagagacttcttacgg-acaccgcccctcaaaatccaaaattccatcgtttaga 6223539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 44572998 - 44572885
Alignment:
Q  79 gattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaat 178  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||| ||  |||||||||||| ||||||| ||||||    
T  44572998 gattgctccgaaacttccccataaaatcagaaaaaattcaaggaccatgactcccatagaagagacttcttaggggactccgcccatcaaaattcaaaat 44572899  T
Q  179 tccatcgtttagac 192  Q
    || |||||||||||    
T  44572898 tctatcgtttagac 44572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 61 - 183
Target Start/End: Original strand, 49786509 - 49786633
Alignment:
Q  61 gttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactc 158  Q
    |||||||| ||||||  ||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||| ||  | |||||    
T  49786509 gttttcggcctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccgtagaagagacttcttatgagactc 49786608  T
Q  159 cgcccctcaaaatccaaaattccat 183  Q
    |||||||||||||||||||||||||    
T  49786609 cgcccctcaaaatccaaaattccat 49786633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 45567847 - 45567735
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  ||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  45567847 gttttgggtcattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccaaaaaatcagaaaaaattcaa 45567748  T
Q  120 ggaccatcactcc 132  Q
    ||||||| |||||    
T  45567747 ggaccatgactcc 45567735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 7011421 - 7011585
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    |||||| || |||| |||||  ||||| |||||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  7011421 cattgtaacctgtttttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacatccccagaaaatcagaaaaaattcaaggaccatga 7011520  T
Q  129 ctcccat---agaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |   |||||  |||| ||  |||||||||||||||  ||||||||||||||  ||||||||    
T  7011521 ctcccttagaagaagaaacttcttatgggactccgcccctc--aatccaaaattccaatgtttagac 7011585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 26723436 - 26723319
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||  ||||||||||  ||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  || |    
T  26723436 cattgttatctgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggattatga 26723337  T
Q  129 ctcccatagaagggactt 146  Q
    ||||| || |||||||||    
T  26723336 ctcccttataagggactt 26723319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 15069798 - 15069683
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||| ||||||||||||||||||||  ||||| || ||||||  ||||||  ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  15069798 gttttggatcattgttacttgttcttagttaaaaatcggattttcgagctacttgatcggattgctc-gaaactttcccagaaaatcagaaaaaaatcaa 15069700  T
Q  120 ggaccatcactcccata 136  Q
    |||||||||||||||||    
T  15069699 ggaccatcactcccata 15069683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 49677664 - 49677786
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||  ||| |||||||  ||||||||| ||||||||||  ||||| |||||||| | ||||||  |||||||||||||||||||||||    
T  49677664 cttcctaactctcattcttatgttttgggtcattgttacatgttcttagttaaaaatcgggttttcagcctacttgatcggattgctccgaaacttcccc 49677763  T
Q  99 agaaaatcagaaaaaattcaagg 121  Q
    |||||||||||||||||||||||    
T  49677764 agaaaatcagaaaaaattcaagg 49677786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 3561233 - 3561120
Alignment:
Q  79 gattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaat 178  Q
    |||||||||||||||| |||| |||||||||||| | ||||| | ||  ||||||||||||| ||||| ||| ||  |||||||||||||||| ||||||    
T  3561233 gattgctccgaaactttcccataaaatcagaaaacaatcaagaatcaagactcccatagaagtgacttcttgtggagctccgcccctcaaaattcaaaat 3561134  T
Q  179 tccatcgtttagac 192  Q
    | |||| |||||||    
T  3561133 ttcatcttttagac 3561120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 41584426 - 41584366
Alignment:
Q  132 ccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||| ||||||||    
T  41584426 ccatagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtttagac 41584366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 49677783 - 49677837
Alignment:
Q  138 aagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  49677783 aagggacttcttacgggactccgcccctcaaaattcaaaattccatcgtttagac 49677837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 800741 - 800678
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||||||||| || |||||||| |||| ||||||||||||||||||||||||||||    
T  800741 actcccttagaagggacttcttacgggactctgccc-tcaaaatccaaaattccatcgtttagac 800678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 40650529 - 40650489
Alignment:
Q  152 gggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40650529 gggactccgcccctcaaaatccaaaattccatcgtttagac 40650489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 17000590 - 17000672
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaa 111  Q
    ||||||||| ||||||||||  ||||| |  ||||||| ||||||  | ||||||||||||||||||||||||||||||||||    
T  17000590 cattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccccagaaaatcagaaa 17000672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 9446037 - 9445974
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| ||||||||| || || ||||||||||||| ||||||||||||||| ||||||||||||    
T  9446037 actcccttagaagggatttcttacgggactccgccc-tcaaaatccaaaatttcatcgtttagac 9445974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 25563315 - 25563272
Alignment:
Q  76 tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  25563315 tcggattgctccgaaacttcccaagaaaatcaggaaaaattcaa 25563272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 8704360 - 8704307
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttt 188  Q
    |||||||||||| || ||||||| | ||||||||||||||||||| ||||||||    
T  8704360 tagaagggacttcttacgggactacacccctcaaaatccaaaatttcatcgttt 8704307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 38131218 - 38131259
Alignment:
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  38131218 cgggactctgcccctcaaaatccaaaactccatcgtttagac 38131259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 26230352 - 26230412
Alignment:
Q  130 tcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttag 190  Q
    ||||||||||||||||| ||  ||||||| | ||||||||||| |||||| ||||||||||    
T  26230352 tcccatagaagggacttcttatgggactctgtccctcaaaatctaaaatttcatcgtttag 26230412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 40650623 - 40650548
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaa 104  Q
    ||||||||| ||||||||||  ||||  | |||||||| ||||||  ||||||||||||||||||||| |||||||    
T  40650623 cattgttacctgttcttagttaaaaaccgagttttcgggctacttgatcggattgctccgaaacttcctcagaaaa 40650548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 34162669 - 34162591
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatca 107  Q
    ||||||||| ||||||||||  ||||| |  ||||||| ||||||  | || |||||||||||||||||||||||||||    
T  34162669 cattgttacatgttcttagtcaaaaatcgaattttcgggctacttgattggtttgctccgaaacttccccagaaaatca 34162591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 43319126 - 43319073
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    |||||| ||||| || ||||||||||||| |||||||||||||||||||| ||||    
T  43319126 tagaagagacttcttacgggactccgccc-tcaaaatccaaaattccatcattta 43319073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 6099766 - 6099726
Alignment:
Q  152 gggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| ||||||||||||||||||||  |||||||||||    
T  6099766 gggactctgcccctcaaaatccaaaatttaatcgtttagac 6099726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 6099946 - 6099906
Alignment:
Q  152 gggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| ||||||||||||||||||||  |||||||||||    
T  6099946 gggactctgcccctcaaaatccaaaatttaatcgtttagac 6099906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 5e-53; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 46622752 - 46622580
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||||||||||||||  ||||| || ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  46622752 gttttgggtcattgttacttgttcttagtcaaaaatcggattttcggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaa 46622653  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||||||   | || || ||||||||||||||||| ||||||||||||||||||||||||    
T  46622652 ggaccatcactcccatagaatcaatttcttacgggactccgcccctcagaatccaaaattccatcgtttagac 46622580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 28873220 - 28873379
Alignment:
Q  34 tgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactc 131  Q
    |||||||||||||||||  ||||| |||||||||| ||||||  |||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  28873220 tgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaattagaaaaaattcaaggaacatgactc 28873319  T
Q  132 ccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    || |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  28873320 ccctagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttaga 28873379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 50716433 - 50716627
Alignment:
Q  1 cttcgtaactcccatcattacgttttggag-cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccc 97  Q
    |||| |||||| ||||||| |||||| | | ||||||||||||||||||||  ||||| |||||||||| ||||||  ||||||||||||||||||||||    
T  50716433 cttcctaactctcatcattccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccc 50716532  T
Q  98 cagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||| ||||||||||| |||||  |||||| ||||| || ||||| |||||||||||||||||||||||||||| |||||||    
T  50716533 cagaaaatcagaaaaaactcaaggaccatgactcctctagaagagacttcttacgggattccgcccctcaaaatccaaaattccatcctttagac 50716627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 50796414 - 50796220
Alignment:
Q  1 cttcgtaactcccatcattacgttttggag-cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccc 97  Q
    |||| |||||| ||||||| |||||| | | ||||||||||||||||||||  ||||| |||||||||| ||||||  ||||||||||||||||||||||    
T  50796414 cttcctaactctcatcattccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccc 50796315  T
Q  98 cagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||| ||||||||||| |||||  |||||| ||||| || ||||| |||||||||||||||||||||||||||| |||||||    
T  50796314 cagaaaatcagaaaaaactcaaggaccatgactcctctagaagagacttcttacgggattccgcccctcaaaatccaaaattccatcctttagac 50796220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 51258615 - 51258778
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| | |||||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||||||||| ||| |    
T  51258615 cattgttacatgttcttagtcaaaaatcgagttttcggacaacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaaggatcatga 51258714  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  51258715 ctcccgtagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagac 51258778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 34821300 - 34821128
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  ||||  |||||||| | ||||||  |||||| |||| ||||||||||||||||||||||||||||||||    
T  34821300 gttttgggtcattgttacctgttcttagttaaaaagcgggttttcaggctacttgatcggatcgctctgaaacttccccagaaaatcagaaaaaattcaa 34821201  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| |||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  34821200 ggaccatgactctcatagaagggacttcttacgggagtccgcccctcaaaatccaaaattccatcgtttagac 34821128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 35142285 - 35142447
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||  ||||||||||  |||| ||||||||||| ||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  35142285 cattgttatctgttcttagtcaaaaactgggttttcgggctacttgatcggattgctccgaaacttccc-agaaaatcagaaaaaattcaaggaccatga 35142383  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||||||||| || |||| |||||||||| ||||||||||||||||||||||||||    
T  35142384 ctcccgtagaagggacttcttacggggctccgcccctaaaaatccaaaattccatcgtttagac 35142447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 22 - 191
Target Start/End: Complemental strand, 3352023 - 3351852
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  |||||||||  |||||||||  ||||| |||||||| | ||||||  |||||||||||||||||||||| ||||||||||||||||||||     
T  3352023 gttttgggtcattgttaccggttcttagtaaaaaatagggttttcaggctacttgatcggattgctccgaaacttccctagaaaatcagaaaaaattcag 3351924  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    |||| || |||||| |||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||    
T  3351923 ggacaatgactcccgtagaagggacttcttatgggactccgcccctcaaaatctaaaattccatcgtttaga 3351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 31 - 191
Target Start/End: Complemental strand, 3902754 - 3902592
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| |||||||| || |||||  ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |    
T  3902754 cattgttacatgttcttagtcaaaaatcgggttttcagattacttgatcggattgctcggaaacttgcccagaaaatcagaaaaaattcaaggaccatga 3902655  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    | ||| ||||||| | || || |||||||||||||||||||||||||||||| ||||||||||    
T  3902654 cacccttagaaggaatttcttacgggactccgcccctcaaaatccaaaattcaatcgtttaga 3902592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 4394221 - 4394353
Alignment:
Q  62 ttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactcc 159  Q
    ||||||||||||||  || |||||||||||||||| |||||||||||| |||||| ||||||||||| |||||| ||||||| ||||||| ||||| |||    
T  4394221 ttttcggactacttgatcagattgctccgaaactttcccagaaaatcaaaaaaaaatcaaggaccatgactcccgtagaaggaactttttacgggattcc 4394320  T
Q  160 gcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||||||||    
T  4394321 gcccctcaaaatccaaaattccatcgtttagac 4394353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 38977726 - 38977537
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||| ||||||  ||||  | |||||||  ||||||  |||||||||||| ||||||||||    
T  38977726 cttcctaactctcatccttctgttttgggtcattgttacctgtccttagttaaaaaccgagttttcgagctacttgatcggattgctccaaaacttcccc 38977627  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttt 188  Q
    ||||||| |||||||||||||||||| | |||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  38977626 agaaaataagaaaaaattcaaggaccgtgactcccgtagaagggacttcttgtgggactccgcccctcaaaatccaaaatttcatcgttt 38977537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 47302220 - 47302393
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaa-tcagaaaaaattca 118  Q
    |||||||  ||||||||| ||||||||||  ||||| | |||||||| ||||||  |||||||| || ||||||| |||| |||| ||||||||||||||    
T  47302220 gttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgttctgaaactttcccaaaaaaatcagaaaaaattca 47302319  T
Q  119 aggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||| ||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||    
T  47302320 aggatcatgactcccatagaagggacttcttacgggactctgcccctcaaaatccaaaattccattgtttagac 47302393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 2358579 - 2358407
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||| | | ||||||||  ||||| ||||||| || ||||||  ||| ||||||| |||||||||||| |||||||||||||||||||    
T  2358579 gttttgggtcattgttgcatattcttagtcaaaaatcgggtttttgggctacttgatcgaattgctctgaaacttccccaaaaaatcagaaaaaattcaa 2358480  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| |||||| |||||||||||| || ||||||| |||||||||||||| |||||||||| ||||||||    
T  2358479 ggaccatgactcccctagaagggacttcttacgggactacgcccctcaaaatctaaaattccattgtttagac 2358407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 43472926 - 43472762
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaa-tcagaaaaaattca 118  Q
    |||||||  ||||||||  ||||||||||  ||||| |||||||||| ||||||  ||||||| ||| |||||||||||| |||| ||||||||||||||    
T  43472926 gttttgggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggattactctgaaacttccccaaaaaaatcagaaaaaattca 43472827  T
Q  119 aggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccat 183  Q
    |||||||| |||||  |||||||||||| || |||||||||||||||||||||||||||||||||    
T  43472826 aggaccatgactcctctagaagggacttcttacgggactccgcccctcaaaatccaaaattccat 43472762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 189
Target Start/End: Complemental strand, 35345857 - 35345697
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    |||||||| |||||||||||  ||||||||||||||||  || ||  ||||||||||||||||||||||||||||||||||| ||| ||||| | ||  |    
T  35345857 cattgttagttgttcttagtcaaaaattgggttttcgggttaattgatcggattgctccgaaacttccccagaaaatcagaagaaaatcaagtatcaaga 35345758  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||| | |||||||||||| |  |||||||||||||||||||||||||||||||| ||||||    
T  35345757 ctctcgtagaagggacttctaacgggactccgcccctcaaaatccaaaattccaccgttta 35345697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 39150023 - 39150176
Alignment:
Q  34 tgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactc 131  Q
    |||||| ||||||||||  ||||  |||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  39150023 tgttacatgttcttagttaaaaaccgggttttcgggctacttggtcgaattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactt 39150122  T
Q  132 ccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    || |||||||||||| || ||||       |||||||||||||||||||||||||||||||    
T  39150123 ccttagaagggacttcttacggg-------ccctcaaaatccaaaattccatcgtttagac 39150176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 47739859 - 47739729
Alignment:
Q  53 aaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttg 150  Q
    |||||||||||||||| ||||||  |||||||||||| ||||||||||||||||| |||||||||||||| ||| | ||||||||||||| ||||| ||     
T  47739859 aaaattgggttttcgggctacttgatcggattgctccaaaacttccccagaaaattagaaaaaattcaagaaccgtgactcccatagaagagacttcttt 47739760  T
Q  151 cgggactccgcccctcaaaatccaaaattcc 181  Q
     |||||||||||||||||||| |||||||||    
T  47739759 ggggactccgcccctcaaaattcaaaattcc 47739729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 51540530 - 51540412
Alignment:
Q  74 tttcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatcc 173  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||||||||| |   |||| || ||||||||||||||    
T  51540530 tttcggattgctccgaaacttccccaaaaaatccgaaaaaattcaaggaccatgactcccttagaagggacttctcatgggattctgcccctcaaaatcc 51540431  T
Q  174 aaaattccatcgtttagac 192  Q
    |||| ||||||||||||||    
T  51540430 aaaactccatcgtttagac 51540412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 3938384 - 3938556
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  |||||  |||||||||  |||||  ||||||||||| |||||||||||| |||||||||||||||||||    
T  3938384 gttttgggtcattgttacctgttcttagtcaaaaatctggttttcgggttacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcaa 3938483  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| |||||| || |||| |||| || |  |||||||||||||||||||  ||||| ||| ||||||||    
T  3938484 ggaccatgactcccttataaggaacttcttacaagactccgcccctcaaaatcttaaatttcattgtttagac 3938556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 33439383 - 33439561
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcag----aaaaaat 115  Q
    |||||||  ||||||||||| ||||||||  |||||  | ||||||||||||||  ||||||||||||||||||| |||||||||||||    |||||||    
T  33439383 gttttgggtcattgttactttttcttagttaaaaatcagattttcggactacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaaaaaat 33439482  T
Q  116 tcaa--ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||  ||   || ||||||||| ||||||||| || ||| |||||||||| |||||||||||||||||||||||||||    
T  33439483 tcaagtggttaatgactcccataaaagggacttgttacggaactccgccccacaaaatccaaaattccatcgtttagac 33439561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 52777433 - 52777583
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||| ||| ||||||||||  ||||| |||||||||| ||||||  ||||||||||| |||||||||||| |||||||||||||||||||    
T  52777433 gttttgggtcattgctacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcaa 52777532  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaat 171  Q
    |||| ||  ||||| || ||||||||| ||  |||||||||||| |||||||    
T  52777533 ggactatgtctcccttaaaagggacttctt-tgggactccgcccttcaaaat 52777583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 501034 - 500971
Alignment:
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  501034 ctcccatagaagggacttcttacggcactccgcccctcaaaatccaaaattccatcgtttagac 500971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 29048622 - 29048704
Alignment:
Q  110 aaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| ||||||| ||  |||||| ||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  29048622 aaaaaatcaaggatcaagactcccgtagaaaggacttattacgggactccgcccctcaaaatccaaaattccatcgtttagac 29048704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 49096174 - 49096002
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||| ||  ||||| | |||||||| ||||||  |||||||||||| |||||||||| |||| |||||||||| ||||||| ||| |    
T  49096174 cattgttacctgttcttcgtcaaaaatcgagttttcgggctacttgatcggattgctccaaaacttcccccgaaagtcagaaaaaaatcaaggatcatga 49096075  T
Q  129 ct---------cccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||         ||  |||||| ||||| ||| ||||||||| |||||||||||||||||||||||||| ||||    
T  49096074 ctcaaaacttccctgtagaagagacttcttgagggactccgtccctcaaaatccaaaattccatcgttaagac 49096002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 191
Target Start/End: Original strand, 51816475 - 51816587
Alignment:
Q  79 gattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaat 178  Q
    ||||||||||||| ||||||| ||||| |||||||| ||||||| ||  || ||| ||||| |||||| || |||||||| |||||||||||| |||| |    
T  51816475 gattgctccgaaatttccccaaaaaataagaaaaaaatcaaggatcaaaacacccctagaatggacttcttacgggactctgcccctcaaaattcaaatt 51816574  T
Q  179 tccatcgtttaga 191  Q
    | |||||||||||    
T  51816575 ttcatcgtttaga 51816587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 41300901 - 41300984
Alignment:
Q  109 aaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| ||||||||||| ||||||  |||||  |||| || ||||||||||||| |||||||| |||||||||||||||||||    
T  41300901 aaaaaaatcaaggaccattactcccgcagaagaaacttcttacgggactccgcccatcaaaatcaaaaattccatcgtttagac 41300984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 14828817 - 14828701
Alignment:
Q  78 ggattgctccgaaacttccccagaaaatcagaaaaaat--tcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaa 175  Q
    ||||||||||||||||| |||| ||||||  |||||||  ||||||| ||  | |||  |||||| ||||| || | ||||||||||  |||||||||||    
T  14828817 ggattgctccgaaactttcccataaaatcgaaaaaaataatcaaggatcaagattcctctagaagagacttcttacaggactccgcctttcaaaatccaa 14828718  T
Q  176 aattccatcgtttagac 192  Q
    |||||||||||||||||    
T  14828717 aattccatcgtttagac 14828701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 47123207 - 47123323
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||  |  ||||||| ||||||  ||||||||||||||||||| |||    
T  47123207 cttcctaactctcatccttctgttttgggccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctccgaaacttgccc 47123306  T
Q  99 agaaaatcagaaaaaat 115  Q
    |||||||||||||||||    
T  47123307 agaaaatcagaaaaaat 47123323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 47130573 - 47130689
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||||||  ||||  |  ||||||| ||||||  ||||||||||||||||||| |||    
T  47130573 cttcctaactctcatccttctgttttgggccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctccgaaacttgccc 47130672  T
Q  99 agaaaatcagaaaaaat 115  Q
    |||||||||||||||||    
T  47130673 agaaaatcagaaaaaat 47130689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 40062590 - 40062754
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaat-tcaaggaccatc 127  Q
    |||| ||| |||||||||||  |||||  ||||||||| ||||||  || |||||| |||||| ||||| |||||||||| |||||  ||||||| ||      
T  40062590 cattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgcaccgaaatttccctagaaaatcaggaaaaacatcaaggatcaag 40062689  T
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||| | |||||||||||| || ||| |||  | | ||||||||| ||||||||||| |||||||    
T  40062690 actctcgtagaagggacttcttacggtactttgtctctcaaaatctaaaattccatcatttagac 40062754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 30721736 - 30721674
Alignment:
Q  53 aaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaa 114  Q
    |||||||||||||||  ||||||  ||||||||||||||||||| |||||||||||||||||||    
T  30721736 aaaattgggttttcgagctacttgatcggattgctccgaaactt-cccagaaaatcagaaaaaa 30721674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 34009936 - 34009882
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    |||||||||||| || || ||||||||||| ||||||||||||||||||| ||||    
T  34009936 tagaagggacttcttacgtgactccgccccccaaaatccaaaattccatcattta 34009882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 30721655 - 30721619
Alignment:
Q  156 ctccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||| ||||||||||||    
T  30721655 ctccgcccctcaaaatccaaaatttcatcgtttagac 30721619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 35081738 - 35081682
Alignment:
Q  136 agaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||| ||||||||||||||||  ||||||  ||||||||||| |||||||    
T  35081738 agaagggacttcttgcgggactccgccctccaaaatttaaaattccatcatttagac 35081682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 43420028 - 43419917
Alignment:
Q  78 ggattgctccgaaacttccccagaaaatcagaa-aaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaa 176  Q
    |||||||||||||||||  ||| ||||| |||| |||| ||||||| ||  ||||||||||| | ||||| || || || |||  | |||||||||||||    
T  43420028 ggattgctccgaaacttagccataaaattagaagaaaaatcaaggatcaaaactcccataga-gagacttcttacgagattccatcactcaaaatccaaa 43419930  T
Q  177 attccatcgttta 189  Q
    |||||||||||||    
T  43419929 attccatcgttta 43419917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 45244607 - 45244670
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| ||||| |||||| || || |||||||||| |||||||||||||||||||| |||||||    
T  45244607 actcccttagaaaggacttcttacgagactccgccc-tcaaaatccaaaattccatcatttagac 45244670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 51492980 - 51493087
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaa-ttgggttttcggactactt--tcggattgctccgaaacttccc 97  Q
    |||| |||||| |||| ||| ||||| |  ||||||||  ||||||||||  |||| ||||||||| || ||||||  || |||||||||||||||||||    
T  51492980 cttcctaactctcatccttatgtttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctacttgatcagattgctccgaaacttccc 51493079  T
Q  98 cagaaaat 105  Q
    ||||||||    
T  51493080 cagaaaat 51493087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 192
Target Start/End: Complemental strand, 43471505 - 43471467
Alignment:
Q  154 gactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  43471505 gactccacccctcaaaatccaaaatttcatcgtttagac 43471467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 29036137 - 29036178
Alignment:
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||| ||||||||||||| |||||| ||||||||||||    
T  29036137 cgggactctgcccctcaaaatctaaaatttcatcgtttagac 29036178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 45711927 - 45711886
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaa 176  Q
    |||||||||||| || ||||||||| ||||||||||||||||    
T  45711927 tagaagggacttcttacgggactccacccctcaaaatccaaa 45711886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 4300125 - 4300066
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttt 188  Q
    ||||||||| ||||||||| || | ||||||| ||| ||||||||||||||| ||||||||    
T  4300125 actcccatataagggacttcttacaggactccaccc-tcaaaatccaaaatttcatcgttt 4300066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 11266573 - 11266609
Alignment:
Q  155 actccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  11266573 actccgtccctcaaaatctaaaattccatcgtttaga 11266609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 50384373 - 50384271
Alignment:
Q  79 gattgctccgaaacttccccagaaaatcagaaaaaat---tcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaa 175  Q
    ||||||||||||||||||||| ||||||| ||||||    |||||||  |  |||||  |||||||||||| || || ||||||| ||| |||| |||||    
T  50384373 gattgctccgaaacttccccaaaaaatcataaaaaaaaaatcaaggataaagactccattagaagggacttcttacgagactccgtcccacaaattccaa 50384274  T
Q  176 aat 178  Q
    |||    
T  50384273 aat 50384271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 25217717 - 25217554
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| |||||||||| ||||||  |||||||||||||| ||||| | |||||||||||||||||||||||||||| |    
T  25217717 cattgttacctgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctccgacacttctctagaaaatcagaaaaaattcaaggaccatga 25217618  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  25217617 ctcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattctatcgtttagac 25217554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 42894579 - 42894751
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| |||||||||   ||||| | |||||||||||||||  ||||||| |||||||||||||||||||||| |||||||||||||    
T  42894579 gttttgggtcattgttacatgttcttaggcaaaaatcgagttttcggactacttgatcggattactccgaaacttccccagaaaattagaaaaaattcaa 42894678  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| |||||| ||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||    
T  42894679 ggaccatgactcccttagaaggaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 42894751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 41510402 - 41510209
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||||||||||||||  |||| ||||||||||| ||||||  ||||||||||||||||||||||     
T  41510402 cttcctaactctcatccttctgttttgggtcattgttacttgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttccct 41510303  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||| |||| | ||||||| |||| ||  |||||||| ||||||||||||||||||| ||||||||||||    
T  41510302 agaaaatcagaaaaaattcaaggaccatgactctcttagaaggaacttcttatgggactccacccctcaaaatccaaaatttcatcgtttagac 41510209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 34517303 - 34517477
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaa--aattc 117  Q
    |||||||  ||||||||| ||||||||||  ||||||||||||||||| |||||  ||||||||||||||||||| |||||||| ||||||||  |||||    
T  34517303 gttttgggtcattgttacctgttcttagtcaaaaattgggttttcggaatacttgatcggattgctccgaaacttacccagaaagtcagaaaaaaaattc 34517402  T
Q  118 aaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| ||| ||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||    
T  34517403 aaggatcatgactcccatagaagggacttcttacgggattccgcacctcaaaatccaaaattccatcgtttagac 34517477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 44465638 - 44465520
Alignment:
Q  74 tttcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatcc 173  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||    
T  44465638 tttcggattgctccgaaatttccccagaaaatcagaaaaaattcaaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatcc 44465539  T
Q  174 aaaattccatcgtttagac 192  Q
    ||||||||||| |||||||    
T  44465538 aaaattccatcttttagac 44465520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 41 - 192
Target Start/End: Complemental strand, 33452376 - 33452222
Alignment:
Q  41 tgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaat-tcaaggaccatcactcccatag 137  Q
    ||||||||||  ||||| ||||||  |||||||||  ||||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||     
T  33452376 tgttcttagtcaaaaatcgggtttctggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaaaatcaaggaccatgactcccataa 33452277  T
Q  138 aagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  33452276 aagcgacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 33452222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 15995081 - 15994899
Alignment:
Q  6 taactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaa 103  Q
    |||||| |||||||  |||||||  ||||||||| ||||||||||  |||||||| ||||| ||||| ||  |||||||||||||||||||||||| |||    
T  15995081 taactctcatcattctgttttgggtcattgttacatgttcttagtaaaaaattggattttcagactatttgatcggattgctccgaaacttccccataaa 15994982  T
Q  104 atcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||||      |||| ||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  15994981 atcagaaaaaattcaagg------actctcatagaatggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagac 15994899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 38308773 - 38308612
Alignment:
Q  33 ttgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcact 130  Q
    ||||||| ||||||||||  ||||| ||| |||||| ||||||  || |||||||| ||||||||||||||||||||||||||||||||||| ||| |||    
T  38308773 ttgttacctgttcttagtcaaaaatcgggatttcgggctacttgatcagattgctctgaaacttccccagaaaatcagaaaaaattcaaggatcatgact 38308674  T
Q  131 cccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||| ||||||||| |||||   ||||||||||||||||||||||||||||||| ||||||||    
T  38308673 cccttagaagggaatttttattggactccgcccctcaaaatccaaaattccattgtttagac 38308612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 5507621 - 5507794
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaa-aattca 118  Q
    |||||||  ||||| ||| ||||||||||  |||||  ||||||||| | ||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  5507621 gttttgggtcattgctacctgttcttagtcaaaaatcaggttttcgggcaacttgatcggattgctccgaaacttccccagaaaatcagaaaaaaattca 5507720  T
Q  119 aggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||| ||| |||||||||||||  |||| ||  || ||||||||||||||||||||||||||||||||||||||    
T  5507721 aggatcatgactcccatagaagaaacttcttatggaactccgcccctcaaaatccaaaattccatcgtttagac 5507794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 53 - 192
Target Start/End: Original strand, 27670729 - 27670870
Alignment:
Q  53 aaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttg 150  Q
    ||||| |||||||||||||||||  ||||||||||||||||||| |||| ||||||||||||||||||| |||||| |||||| |||||| ||| | ||     
T  27670729 aaaatcgggttttcggactacttgatcggattgctccgaaactttcccataaaatcagaaaaaattcaacgaccatgactcccttagaagagacctctta 27670828  T
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
     |||||||||||||||||||| ||||||||||||||||||||    
T  27670829 tgggactccgcccctcaaaattcaaaattccatcgtttagac 27670870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 17474682 - 17474578
Alignment:
Q  88 gaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtt 187  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||  |||| || |||||||||||||||||||||||||||||||||||||    
T  17474682 gaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaagaaacttcttacgggactccgcccctcaaaatccaaaattccatcgtt 17474583  T
Q  188 tagac 192  Q
    |||||    
T  17474582 tagac 17474578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 38065519 - 38065357
Alignment:
Q  32 attgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcac 129  Q
    |||||||| ||||||||||  |||||| | ||||| | ||| ||  ||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||    
T  38065519 attgttacctgttcttagtaaaaaattagattttcaggctatttgatcggattgctccgaaactttcccataaaatcagaaaaaattcaaggatcatgac 38065420  T
Q  130 tcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||  |||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  38065419 tcctgtagaagagacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagac 38065357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 32187842 - 32187664
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  ||||||||| ||||||| ||  ||||| |||||||||||||||||  |||||||||||||||||||||||    
T  32187842 cttcctaactctcatccttctgttttgggtcattgttacctgttcttggtcaaaaatcgggttttcggactacttgatcggattgctccgaaacttcccc 32187743  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||||||||||||||               ||||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  32187742 agaaaatcagaaaaaattcaaggaccat---------------gacttcttacgggactccacccctcaaaatccaaaattccatcgtttagac 32187664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 41203138 - 41202969
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  |||||||| ||||||| | ||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  41203138 gttttgggtcattgttacctgttcttagttaaaaattggattttcgggcaacttgatcggattgctccgaaacttccccagaaaattagaaaaaattcaa 41203039  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||   | |||| | |||||| ||||  || | ||||||||||| ||||||||||||||| ||||||||||||    
T  41203038 gga---tgactctcgtagaagagactccttacaggactccgcccatcaaaatccaaaatttcatcgtttagac 41202969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 41854800 - 41854683
Alignment:
Q  76 tcggattgctccgaaacttccccagaaaatcagaaaaaa-ttcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatcca 174  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||| ||| || ||  ||||||| |||| ||  |||||||||||||||||||||||    
T  41854800 tcggattgctctgaaacttccccagaaaatcagaaaaaaattcaaggatcatgacaccattagaaggaacttcttatgggactccgcccctcaaaatcca 41854701  T
Q  175 aaattccatcgtttagac 192  Q
    ||||||||||||||||||    
T  41854700 aaattccatcgtttagac 41854683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 39447373 - 39447531
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaa-ttcaaggaccatc 127  Q
    ||||||||| ||||||||||  ||||| |||| ||| |||| |||  ||||||||||| |||||||||| |||||||||||||||| ||||||||||||     
T  39447373 cattgttacatgttcttagtcaaaaatcgggtcttccgactgcttgatcggattgctctgaaacttccctagaaaatcagaaaaaaattcaaggaccatg 39447472  T
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
           |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  39447473 c------tagaagggacttcttacgggactccgcccctcaaaatccaaaattacatcgtttagac 39447531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 30763907 - 30764024
Alignment:
Q  76 tcggattgctccgaaacttccccagaaaatcagaaaaaat-tcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatcca 174  Q
    ||||||||||||||||||||| |||||||||||||||||  |||| || ||  |||| |||||||||||||| || ||||||||||||||||||||||||    
T  30763907 tcggattgctccgaaacttcctcagaaaatcagaaaaaaaatcaaagatcaagactctcatagaagggacttcttacgggactccgcccctcaaaatcca 30764006  T
Q  175 aaattccatcgtttagac 192  Q
    ||||| |||||| |||||    
T  30764007 aaatttcatcgtctagac 30764024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 35251141 - 35251306
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcaga--aaaaattcaaggaccat 126  Q
    |||||||| |||||||||||  |||||  ||||||||| ||||||  || |||||||||||||||| ||||||||||||||  |||||  |||||| ||     
T  35251141 cattgttagttgttcttagtcgaaaatccggttttcgggctacttgatcagattgctccgaaactttcccagaaaatcagagaaaaaaaccaaggatcaa 35251240  T
Q  127 cactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
     |||||||||||| | |||| ||  |  ||||||||||| ||||||||||||| ||||||||||||    
T  35251241 gactcccatagaaagtacttcttatgaaactccgccccttaaaatccaaaatttcatcgtttagac 35251306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 16750381 - 16750275
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||  ||||||||||  ||||| || ||||||||||||||  ||||||||  |||||||||||||||| |||||||||||||||||    
T  16750381 gttttgggtcattgttatctgttcttagtaaaaaatcggattttcggactacttgatcggattgtaccgaaacttccccagacaatcagaaaaaattcaa 16750282  T
Q  120 ggaccat 126  Q
    |||||||    
T  16750281 ggaccat 16750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 33440401 - 33440291
Alignment:
Q  81 ttgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattc 180  Q
    |||||||||||||||||||||||||||| |||     ||||| ||  ||||| ||| ||||||||| || |||||||||||| |||||||| ||||||||    
T  33440401 ttgctccgaaacttccccagaaaatcaggaaaggcctaaggatcaagactcctataaaagggacttcttacgggactccgcctctcaaaattcaaaattc 33440302  T
Q  181 catcgtttaga 191  Q
    |||||||||||    
T  33440301 catcgtttaga 33440291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 17133035 - 17133099
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||| |||||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  17133035 actcccttagaagagactttttacgggactccgaccctcaaaatccaaaatttcatcgtttagac 17133099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 11457209 - 11457326
Alignment:
Q  79 gattgctccgaaacttccccagaaaatcagaa----aaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatcca 174  Q
    ||||||| ||| ||||||||||||||| | ||    |||| ||||||| ||  | ||||||||||||||||| || || ||||||| ||||||||||  |    
T  11457209 gattgctgcgatacttccccagaaaattaaaagaaaaaaaatcaaggatcaaaattcccatagaagggacttcttacgagactccgtccctcaaaattta 11457308  T
Q  175 aaattccatcgtttagac 192  Q
    ||||||||||||||||||    
T  11457309 aaattccatcgtttagac 11457326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 192
Target Start/End: Complemental strand, 16750263 - 16750224
Alignment:
Q  153 ggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16750263 ggactccgcccctcaaaatccaaaattccatcgtttagac 16750224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 19109958 - 19109839
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcag--aaaaaattcaaggaccat 126  Q
    ||||||||  ||||||||||  |||||   ||||| |||||||||  |||||||||||||||||||| ||||||| ||||  |||||| ||||||| ||     
T  19109958 cattgttagctgttcttagtcaaaaatccagtttttggactacttgatcggattgctccgaaacttcaccagaaattcaggaaaaaaaatcaaggatcaa 19109859  T
Q  127 cactcccatagaagggactt 146  Q
     |||| ||||||||||||||    
T  19109858 gactctcatagaagggactt 19109839  T

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Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 36875166 - 36875305
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||| ||  |||||||  |||||||||  ||||||||   ||||| |||||||| ||||||||  ||| ||||||||||| |||||||    
T  36875166 cttcctaactctcatccttctgttttgggtcattgttacccgttcttaggcaaaaatcgggttttcagactacttaatcgaattgctccgaatcttcccc 36875265  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaa 139  Q
    | ||||| | ||||||||||||||| || |||||| |||||    
T  36875266 ataaaataa-aaaaaattcaaggactatgactcccgtagaa 36875305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 27900497 - 27900396
Alignment:
Q  89 aaacttccccagaaaatcag-aaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtt 187  Q
    ||||||||||| ||||| || |||||| ||||||| ||| |||  | ||  || |||||||| || |||||| ||||||| |||||||||||||||||||    
T  27900497 aaacttccccataaaattaggaaaaaaatcaaggatcatgactttcgtaagagagactttttacgagactcctcccctcataatccaaaattccatcgtt 27900398  T
Q  188 ta 189  Q
    ||    
T  27900397 ta 27900396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 42604855 - 42604806
Alignment:
Q  143 actttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||    
T  42604855 actttttacgggacttcgccccttaaaatccaaaatttcatcgtttagac 42604806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 45293939 - 45294000
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    |||||| |||||||||||| |||  ||||| | ||||||||||||||||||| |||||||||    
T  45293939 actcccctagaagggacttcttgttggacttcacccctcaaaatccaaaatttcatcgttta 45294000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 42478984 - 42479071
Alignment:
Q  61 gttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactt 146  Q
    |||||||| ||||||  || |||||||| |||||||||||| ||||||| |||||| ||||||| ||  |||||| |||||| |||||    
T  42478984 gttttcgggctacttgatcagattgctctgaaacttccccaaaaaatcataaaaaaatcaaggatcaagactcccgtagaagagactt 42479071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 32069131 - 32069031
Alignment:
Q  79 gattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaat 178  Q
    |||||||| ||||||| |||| ||||| |||||||  ||||||| ||| |||| | ||| || ||||| || | || ||||| |||||||||||||||||    
T  32069131 gattgctctgaaactttccca-aaaattagaaaaatatcaaggatcatgactctcctagtagtgacttcttacaggtctccgtccctcaaaatccaaaat 32069033  T
Q  179 tc 180  Q
    ||    
T  32069032 tc 32069031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 8388980 - 8389016
Alignment:
Q  156 ctccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  8388980 ctccacccttcaaaatccaaaattccatcgtttagac 8389016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 9847149 - 9847086
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||| ||||| || ||||||||||| | |||||||||||||| ||||| |||||||    
T  9847149 actcccttagaagagacttcttacgggactccgctc-tcaaaatccaaaatcccatcatttagac 9847086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 25715795 - 25715834
Alignment:
Q  152 gggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  25715795 gggactccgccc-tcaaaatccaaaattccatcatttagac 25715834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 140696 - 140861
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaa-aattcaaggaccatc 127  Q
    ||||||||||||||||||||  ||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  140696 cattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaaattcaaggaccatg 140795  T
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagaca 193  Q
    ||||||||| ||||||||| || ||||||| |||||||||||||||||| || |||||||||||||    
T  140796 actcccataaaagggacttcttacgggacttcgcccctcaaaatccaaagtttcatcgtttagaca 140861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 4508259 - 4508087
Alignment:
Q  22 gttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaa 119  Q
    |||||||  ||||||||| ||||||||||  ||||| |||||||||| ||||||  | ||||||||||||||||||| |||||||||||||| |||||||    
T  4508259 gttttgggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgattggattgctccgaaacttccgcagaaaatcagaaacaattcaa 4508160  T
Q  120 ggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| ||||||| ||||| ||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  4508159 ggaccatgactcccacagaagagacttcttaagggactccgcccctcaaaatccaaaattccatcgtttagac 4508087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 2539692 - 2539825
Alignment:
Q  61 gttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactc 158  Q
    |||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| ||||| || ||||||||    
T  2539692 gttttcggactacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaattcaaggaccatgactctcatagaagtgacttcttacgggactc 2539791  T
Q  159 cgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||| |||||||||||    
T  2539792 cgcccctcaaaatccaaaattcaatcgtttagac 2539825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 21514979 - 21514816
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaa-ttcaaggaccatc 127  Q
    ||||||||| ||||||||||  ||||| || ||||||||||||||  |||||||||||||||||||||||| ||||| |||||||| |||||||| |||     
T  21514979 cattgttacctgttcttagtcaaaaatcggattttcggactacttgatcggattgctccgaaacttccccataaaattagaaaaaaattcaaggatcat- 21514881  T
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  21514880 actcccttagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 21514816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 3717230 - 3717067
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| |||||||| ||||||||  ||||||||||||||||| |||||| ||||||||||||||||||||||||||      
T  3717230 cattgttacatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacatccccaaaaaatcagaaaaaattcaaggaccatgg 3717131  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||| ||||| || ||||||||||||||||||||||||||||||||  ||||||||    
T  3717130 ctcccctagaagagacttcttacgggactccgcccctcaaaatccaaaattccactgtttagac 3717067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 2813172 - 2813007
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaa--ttcaaggaccat 126  Q
    ||||||||| ||||||||||  ||||| |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  2813172 cattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaaaattcaaggaccat 2813073  T
Q  127 cactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
     |||||| ||||| |||||| ||  |||||||| ||||||||||||||||||| ||||||||||||    
T  2813072 gactcccttagaatggacttcttatgggactccacccctcaaaatccaaaatttcatcgtttagac 2813007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 31 - 191
Target Start/End: Original strand, 17264621 - 17264782
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||||| ||||| || ||||||  | ||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  17264621 cattgttacctgttcttagttaaaaattgagtttttgggctacttgatgggattgctccgaaacttccccagaaaatcagaaaa-attcaaggaccatga 17264719  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttaga 191  Q
    ||||| |||||||||||| || ||||||| || |||||||||||||||||| |||||||||||    
T  17264720 ctcccctagaagggacttcttacgggacttcgtccctcaaaatccaaaatttcatcgtttaga 17264782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 5639073 - 5639232
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| |||||||| |  ||||| |||||| ||| ||||||  || |||||||| ||||||| |||| |||||||||||| ||||||||||||| |    
T  5639073 cattgttacctgttcttaatcaaaaatcgggtttccgggctacttggtcagattgctctgaaactttcccaaaaaatcagaaaa-attcaaggaccatga 5639171  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||||  |||||| ||||| || |||||||||||||||||||||||||||||||||||||||    
T  5639172 ctcctttagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgttta 5639232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 14587538 - 14587349
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| ||||||  ||| ||| |||||||  ||||||||| ||||||||||  |||| ||| |||| || ||||||  | |||||||| |||||||||||     
T  14587538 cttcctaactctaatccttatgttttgggtcattgttacatgttcttagtaaaaaaatggatttttgggctacttgattggattgcttcgaaacttccc- 14587440  T
Q  99 agaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||||||| |||||||||||||||||||  |||||| ||||||| |||| || |||||||||||| |||||||||||||||||||| |||||    
T  14587439 agaaaattagaaaaaattcaaggaccaagactcccttagaaggaacttcttacgggactccgccactcaaaatccaaaattccattgttta 14587349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 24604309 - 24604146
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||||||  ||||| ||||||| || ||||||  ||  |||||| | |||| |||| ||||||| | |||||||||||||| ||| |    
T  24604309 cattgttacctgttcttagtcaaaaatcgggtttttgggctacttgatcacattgcttctaaacatccctagaaaataaaaaaaaattcaaggatcatga 24604210  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||||    
T  24604209 ctcccttagaagggacttcttgcggaactccgcctctcaaaatccaaaattccaccgtttagac 24604146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 237051 - 237172
Alignment:
Q  76 tcggattgctccgaaacttccccagaaaatcagaa-----aaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaa 170  Q
    ||||||||||| |||||||  ||| ||||||||||     |||| ||||||||||  | |||| |||||||| ||| || ||||||||||||||||||||    
T  237051 tcggattgctctgaaacttggccataaaatcagaagaagaaaaaatcaaggaccaagaatcccttagaagggtcttcttacgggactccgcccctcaaaa 237150  T
Q  171 tccaaaattccatcgtttagac 192  Q
    ||||||||||||||||||||||    
T  237151 tccaaaattccatcgtttagac 237172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 5699777 - 5699861
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaa 113  Q
    ||||||||| | ||||||||  ||||| ||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  5699777 cattgttacctattcttagtcaaaaatcgggatttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaa 5699861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 7412990 - 7413065
Alignment:
Q  60 ggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactccc 133  Q
    ||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  7412990 ggttttcggactagttgatcggattgctccgaaacttccacagaaaatcagaaaaaactcaaggaccataactccc 7413065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 29519490 - 29519650
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    ||||||||| ||||||| ||  ||||| |||||||||  ||||||  ||  ||||||||||||||||| ||||||||||||||| ||||||||||   ||    
T  29519490 cattgttacgtgttcttggtcaaaaatcgggttttcgagctacttgatcaaattgctccgaaacttcctcagaaaatcagaaaatattcaaggac---ca 29519586  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatcc-aaaattccatcgtttagac 192  Q
    |||||  |||||  |||| ||  |||||||| || |||||||||| |||||||||||||||||||    
T  29519587 ctccctaagaagaaacttctt-tgggactcctcctctcaaaatccaaaaattccatcgtttagac 29519650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13801005 - 13800894
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttcccc 98  Q
    |||| |||||| |||||||| |||||||  |||||||| |||||||||||  ||||| || |||| | |||||||  ||||||||||||||||||| ||     
T  13801005 cttcctaactctcatcattatgttttgggtcattgttagttgttcttagtcaaaaatcggatttttgaactacttgatcggattgctccgaaacttgcct 13800906  T
Q  99 agaaaatcagaa 110  Q
    ||||||||||||    
T  13800905 agaaaatcagaa 13800894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 5699918 - 5699972
Alignment:
Q  138 aagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||| |||| || ||||||||||||||||||||||||||||||||||||||||||    
T  5699918 aaggaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 5699972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 9905396 - 9905437
Alignment:
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9905396 cgggactccgcccctcaaaatccaaaattccatcgtttagac 9905437  T

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Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 1945408 - 1945367
Alignment:
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  1945408 cgggactccgcccctcaaaatccaaaattccaacgtttagac 1945367  T

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Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 16450407 - 16450592
Alignment:
Q  13 catcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaa 110  Q
    |||||||| ||||| |  ||||||||  ||||||||||  |||||| |||||| || ||||||  || ||||||| |||||||| || ||||||||||||    
T  16450407 catcattatgttttaggtcattgttagctgttcttagtcaaaaatttggtttttgggctacttgatcagattgcttcgaaacttacctagaaaatcagaa 16450506  T
Q  111 ----aaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
        |||| | ||||| ||  |||  | || ||||||||  ||  | |||||||||| ||||||||||||||||||||||||||||    
T  16450507 ggaaaaaaattaaggatcaagactttcttaaaagggactacttatgagactccgcccatcaaaatccaaaattccatcgtttagac 16450592  T

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Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 23407008 - 23407090
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaa 111  Q
    |||| |||||||||||||||  |||||   |||||||| ||||||  |  |||||||||||||||||||||||||||||||||    
T  23407008 cattattacttgttcttagtcaaaaatcaagttttcgggctacttgatttgattgctccgaaacttccccagaaaatcagaaa 23407090  T

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Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 17501305 - 17501358
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||||||||||||||| |||||||||| || ||||||||||||||| |||||||||    
T  17501305 tagaagggactttttacgggactccg-ccatcaaaatccaaaatttcatcgttta 17501358  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 192
Target Start/End: Original strand, 7413106 - 7413141
Alignment:
Q  157 tccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||||||||| ||||||||||||    
T  7413106 tccgcccctcaaaatccaaaatttcatcgtttagac 7413141  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 192
Target Start/End: Original strand, 7416125 - 7416160
Alignment:
Q  157 tccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||||||||||||| |||||||||||    
T  7416125 tccgcccctcaaaatccaaaattcaatcgtttagac 7416160  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 14037913 - 14037748
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatca 128  Q
    |||||||| |||||||||||  |||||   |||||||  ||||||  || ||||||||| |||| |||| | ||||| |||||||  ||||||| ||  |    
T  14037913 cattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctccaaaacatcccaataaaattagaaaaatatcaaggatcaaga 14037814  T
Q  129 ctcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagacac 194  Q
    ||||     || |||||| || |||||||| || ||||||||||||| ||||||||||||| ||||    
T  14037813 ctccacggaaaaggacttcttacgggactctgctcctcaaaatccaacattccatcgtttatacac 14037748  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 29630806 - 29630749
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| ||||| ||  ||||| | |||||||||||||||||||| ||||||||||||    
T  29630806 tagaagagacttcttatgggaccctgcccctcaaaatccaaaatttcatcgtttagac 29630749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 34528661 - 34528737
Alignment:
Q  41 tgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaat 115  Q
    ||||||||||  |||||  ||||||||| ||||||  |||||||||||| |||||||| || |||||||| ||||||    
T  34528661 tgttcttagtcaaaaatctggttttcggtctacttgatcggattgctccaaaacttcctcataaaatcaggaaaaat 34528737  T

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Target: scaffold0018 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 174279 - 174144
Alignment:
Q  59 gggttttcggactactttcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactc 158  Q
    ||||||| |||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||  |||||||||||| || || |||||    
T  174279 gggtttttggactacaatcggattgctccgaaacttccctagaaaatcagaaaaaattcaaggaccatgactcctgtagaagggacttcttacgagactc 174180  T
Q  159 cgcccctcaaaatccaaaattccatcgtttagacac 194  Q
    ||||||||||||| ||||||||||||||||||||||    
T  174179 cgcccctcaaaattcaaaattccatcgtttagacac 174144  T

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Target: scaffold0508 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 3373 - 3178
Alignment:
Q  1 cttcgtaactcccatcattacgttttggagcattgttacttgttcttagtgcaaaattg-ggttttcggactactt--tcggattgctccgaaacttccc 97  Q
    ||||||||||| |||| ||  |||||||  ||||||||||||||||||||  |||| |  ||||||||| ||||||  || |||||||| ||||||||||    
T  3373 cttcgtaactctcatccttctgttttgggtcattgttacttgttcttagtaaaaaaatcaggttttcgggctacttgatcagattgctctgaaacttccc 3274  T
Q  98 cagaaaatcagaaaaaa-ttcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||| || ||||||||| || ||| |||||||||||| ||  ||||| || ||||||||||||||||||||||||||||||||    
T  3273 cagaaaatcagaaaaaaatttaaggaccatgacccccttagaagggacttcttatgggaccccacccctcaaaatccaaaattccatcgtttagac 3178  T

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Target: scaffold0137 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 9463 - 9283
Alignment:
Q  13 catcattacgttttggagcattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaa 110  Q
    |||||||  |||||||  ||||||||| ||||||||||  ||||| || |||||||| |||||  ||||||||||| ||||||| || |||||||||||     
T  9463 catcattctgttttgggtcattgttacatgttcttagttaaaaatcggattttcggattacttgatcggattgctctgaaacttgcctagaaaatcagag 9364  T
Q  111 aaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||||||||||| | |||||| ||||| |||||| || ||||||||||||||||||||| |||||| |||||||||||||    
T  9363 aaaattcaaggaccttgactcccttagaa-ggacttcttacgggactccgcccctcaaaattcaaaataccatcgtttagac 9283  T

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Target: scaffold0027 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 141912 - 141824
Alignment:
Q  31 cattgttacttgttcttagtgcaaaattgggttttcggactactt--tcggattgctccgaaacttccccagaaaatcagaaaaaattc 117  Q
    ||||||| | ||||||||||  ||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  141912 cattgttgcatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 141824  T

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Target: scaffold0027; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 141819 - 141779
Alignment:
Q  152 gggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  141819 gggactctgcccctcaaaatccaaaattccatcgtttagac 141779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 4629 - 4745
Alignment:
Q  76 tcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatcactcccatagaagggactttttgcgggactccgcccctcaaaatccaa 175  Q
    |||||||||||||||||||  ||||||||||| |||||| | ||||| |   ||| ||  | ||||||||| || ||||||||| |||||||||||||||    
T  4629 tcggattgctccgaaacttggccagaaaatcataaaaaaataaaggaacgagacttcctcaaaagggacttcttacgggactccacccctcaaaatccaa 4728  T
Q  176 aattccatcgtttagac 192  Q
    |||| ||||||||||||    
T  4729 aattacatcgtttagac 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 23306 - 23347
Alignment:
Q  151 cgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23306 cgggactccgcccctcaaaatccaaaattccatcgtttagac 23347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 205951 - 205895
Alignment:
Q  135 tagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    ||||| |||||| || ||||||||||||| |||||||||||||||||||| |||||||    
T  205951 tagaaaggacttcttacgggactccgccc-tcaaaatccaaaattccatcatttagac 205895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 205747 - 205684
Alignment:
Q  128 actcccatagaagggactttttgcgggactccgcccctcaaaatccaaaattccatcgtttagac 192  Q
    |||||| |||||| ||||| || ||||||||| ||| ||||||||||||||| |||| |||||||    
T  205747 actcccttagaagagacttcttacgggactccaccc-tcaaaatccaaaatttcatcatttagac 205684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 4122 - 4156
Alignment:
Q  155 actccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||||||||||||||||||||||||||||| |||||    
T  4122 actccgcccctcaaaatccaaaattccattgttta 4156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 102426 - 102460
Alignment:
Q  155 actccgcccctcaaaatccaaaattccatcgttta 189  Q
    ||||||||||||||||||||||||||||| |||||    
T  102426 actccgcccctcaaaatccaaaattccattgttta 102460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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