View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7291_low_3 (Length: 614)

Name: NF7291_low_3
Description: NF7291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7291_low_3
NF7291_low_3
[»] scaffold0202 (1 HSPs)
scaffold0202 (1-241)||(4910-5145)
[»] chr8 (25 HSPs)
chr8 (333-508)||(27927959-27928140)
chr8 (333-485)||(8885500-8885652)
chr8 (333-485)||(44106183-44106335)
chr8 (333-485)||(42280938-42281093)
chr8 (333-486)||(34853290-34853441)
chr8 (336-468)||(3094644-3094776)
chr8 (336-508)||(37248521-37248699)
chr8 (336-486)||(31519938-31520088)
chr8 (337-508)||(16310563-16310740)
chr8 (333-463)||(28916743-28916873)
chr8 (336-508)||(21004353-21004525)
chr8 (386-508)||(40994805-40994933)
chr8 (333-483)||(9073464-9073614)
chr8 (333-456)||(36404232-36404353)
chr8 (333-456)||(41530629-41530753)
chr8 (359-445)||(35676625-35676711)
chr8 (367-436)||(11698382-11698451)
chr8 (359-458)||(17119954-17120053)
chr8 (336-456)||(7971073-7971193)
chr8 (365-449)||(33472059-33472143)
chr8 (381-466)||(4259702-4259788)
chr8 (365-407)||(10840881-10840923)
chr8 (443-485)||(14164104-14164146)
chr8 (365-485)||(40392526-40392648)
chr8 (365-485)||(6395075-6395196)
[»] chr4 (31 HSPs)
chr4 (333-508)||(19835488-19835669)
chr4 (333-485)||(25491442-25491594)
chr4 (333-492)||(17933177-17933336)
chr4 (336-508)||(55052637-55052815)
chr4 (333-485)||(54631509-54631662)
chr4 (333-485)||(7931626-7931777)
chr4 (333-508)||(40703631-40703813)
chr4 (342-508)||(46440292-46440464)
chr4 (333-508)||(48319082-48319263)
chr4 (336-485)||(38536141-38536290)
chr4 (336-508)||(29822590-29822768)
chr4 (342-486)||(25752490-25752634)
chr4 (338-463)||(25539017-25539142)
chr4 (333-486)||(2506077-2506232)
chr4 (336-486)||(23523877-23524028)
chr4 (336-486)||(32441782-32441931)
chr4 (336-466)||(3703316-3703446)
chr4 (360-486)||(8106387-8106514)
chr4 (333-415)||(53894108-53894190)
chr4 (365-486)||(34972864-34972985)
chr4 (382-482)||(41413150-41413249)
chr4 (336-486)||(6228859-6229007)
chr4 (394-485)||(31582469-31582560)
chr4 (336-486)||(6003719-6003869)
chr4 (336-483)||(49396979-49397126)
chr4 (336-450)||(38416536-38416650)
chr4 (342-412)||(50392529-50392599)
chr4 (414-484)||(52077012-52077082)
chr4 (365-405)||(5865208-5865248)
chr4 (45-105)||(55781542-55781602)
chr4 (45-105)||(55845722-55845782)
[»] chr2 (24 HSPs)
chr2 (333-484)||(39447122-39447273)
chr2 (333-484)||(45153834-45153985)
chr2 (333-486)||(17474840-17474993)
chr2 (333-508)||(44465740-44465922)
chr2 (333-508)||(33452456-33452637)
chr2 (333-484)||(25217834-25217984)
chr2 (333-486)||(32187910-32188064)
chr2 (333-484)||(15995156-15995308)
chr2 (334-485)||(41510470-41510622)
chr2 (349-468)||(4268297-4268416)
chr2 (365-484)||(41854942-41855061)
chr2 (336-486)||(36948986-36949136)
chr2 (365-486)||(36874977-36875098)
chr2 (365-508)||(42894369-42894518)
chr2 (338-449)||(5507381-5507494)
chr2 (333-431)||(9847521-9847619)
chr2 (338-508)||(34517066-34517242)
chr2 (365-449)||(33366920-33367003)
chr2 (367-431)||(38308890-38308954)
chr2 (366-492)||(38066708-38066834)
chr2 (359-483)||(41203230-41203354)
chr2 (333-431)||(25715323-25715423)
chr2 (366-466)||(19110076-19110176)
chr2 (374-426)||(34817092-34817144)
[»] chr7 (29 HSPs)
chr7 (333-508)||(28230486-28230666)
chr7 (333-486)||(3936068-3936221)
chr7 (336-508)||(24042206-24042384)
chr7 (333-484)||(43737084-43737234)
chr7 (336-486)||(36629168-36629318)
chr7 (336-486)||(47202457-47202607)
chr7 (333-486)||(37518341-37518494)
chr7 (333-485)||(19225645-19225798)
chr7 (336-484)||(42925689-42925837)
chr7 (338-508)||(36468555-36468730)
chr7 (328-508)||(36408325-36408512)
chr7 (354-485)||(8154880-8155011)
chr7 (336-485)||(31643004-31643153)
chr7 (332-409)||(9151773-9151850)
chr7 (336-486)||(3304804-3304955)
chr7 (333-424)||(42877153-42877244)
chr7 (333-484)||(33151167-33151319)
chr7 (366-441)||(33574125-33574200)
chr7 (359-449)||(7115354-7115444)
chr7 (343-486)||(6467665-6467811)
chr7 (426-508)||(9151849-9151937)
chr7 (367-461)||(31985589-31985685)
chr7 (365-448)||(37218189-37218272)
chr7 (426-486)||(42865148-42865208)
chr7 (359-412)||(26555161-26555214)
chr7 (333-389)||(28349227-28349283)
chr7 (365-425)||(48775574-48775634)
chr7 (359-393)||(28349192-28349226)
chr7 (342-399)||(28346116-28346173)
[»] chr6 (27 HSPs)
chr6 (333-486)||(3717329-3717482)
chr6 (336-485)||(17264373-17264522)
chr6 (333-490)||(14587602-14587759)
chr6 (333-468)||(7412788-7412922)
chr6 (340-508)||(32035080-32035249)
chr6 (336-485)||(4508349-4508498)
chr6 (336-473)||(5699521-5699658)
chr6 (336-508)||(23406759-23406937)
chr6 (334-486)||(1945576-1945727)
chr6 (336-472)||(33413407-33413542)
chr6 (336-472)||(2813284-2813422)
chr6 (57-200)||(31096251-31096398)
chr6 (342-508)||(24604379-24604552)
chr6 (390-486)||(5638879-5638975)
chr6 (38-176)||(31080594-31080735)
chr6 (418-486)||(2539496-2539564)
chr6 (7-160)||(31035435-31035593)
chr6 (359-447)||(9905104-9905192)
chr6 (333-471)||(21517542-21517670)
chr6 (4-180)||(31069919-31070097)
chr6 (37-122)||(31110481-31110566)
chr6 (30-123)||(31056712-31056806)
chr6 (91-181)||(31045951-31046044)
chr6 (77-182)||(31027096-31027204)
chr6 (194-241)||(31096172-31096219)
chr6 (359-449)||(29289710-29289799)
chr6 (194-239)||(31110875-31110920)
[»] chr1 (33 HSPs)
chr1 (333-486)||(32817657-32817810)
chr1 (333-486)||(15069887-15070041)
chr1 (336-486)||(33611456-33611606)
chr1 (333-508)||(42545928-42546108)
chr1 (333-485)||(44573143-44573295)
chr1 (359-508)||(34162740-34162894)
chr1 (342-481)||(40650726-40650865)
chr1 (368-486)||(49677478-49677596)
chr1 (336-490)||(49786232-49786385)
chr1 (338-486)||(23442703-23442851)
chr1 (341-508)||(45046868-45047041)
chr1 (336-486)||(41584716-41584866)
chr1 (336-485)||(18583591-18583740)
chr1 (333-468)||(45567940-45568076)
chr1 (333-456)||(43319272-43319395)
chr1 (333-482)||(40907983-40908133)
chr1 (336-485)||(17000342-17000490)
chr1 (333-486)||(7011169-7011323)
chr1 (365-486)||(32542388-32542506)
chr1 (360-486)||(34006246-34006373)
chr1 (365-456)||(30829542-30829632)
chr1 (333-412)||(52744937-52745016)
chr1 (336-486)||(6223782-6223934)
chr1 (359-485)||(28866677-28866803)
chr1 (365-456)||(24471390-24471481)
chr1 (333-508)||(38885199-38885368)
chr1 (365-449)||(800885-800969)
chr1 (336-422)||(27794818-27794903)
chr1 (390-456)||(38950286-38950352)
chr1 (366-419)||(26723597-26723649)
chr1 (365-431)||(890500-890566)
chr1 (365-403)||(9446183-9446221)
chr1 (367-412)||(24472950-24472995)
[»] chr5 (36 HSPs)
chr5 (336-508)||(15799150-15799328)
chr5 (333-508)||(38372231-38372412)
chr5 (333-508)||(38692801-38692982)
chr5 (338-484)||(6156658-6156804)
chr5 (333-486)||(28083424-28083577)
chr5 (333-486)||(39524698-39524851)
chr5 (336-508)||(4064738-4064916)
chr5 (342-485)||(20891544-20891687)
chr5 (342-508)||(38871602-38871774)
chr5 (335-486)||(40620036-40620187)
chr5 (336-486)||(33487535-33487685)
chr5 (339-508)||(25746954-25747128)
chr5 (333-485)||(15957672-15957823)
chr5 (337-486)||(26190344-26190493)
chr5 (367-486)||(31221385-31221504)
chr5 (333-486)||(24203730-24203879)
chr5 (381-508)||(29862582-29862715)
chr5 (336-486)||(12465156-12465302)
chr5 (336-484)||(27212633-27212782)
chr5 (336-456)||(26319043-26319162)
chr5 (365-460)||(14111851-14111946)
chr5 (337-470)||(37183843-37183977)
chr5 (336-424)||(37095023-37095110)
chr5 (365-456)||(34440688-34440778)
chr5 (359-484)||(32842019-32842145)
chr5 (333-449)||(36359669-36359784)
chr5 (359-466)||(8032219-8032326)
chr5 (333-409)||(31929229-31929304)
chr5 (367-485)||(26095047-26095166)
chr5 (426-485)||(31929171-31929230)
chr5 (359-412)||(34529976-34530029)
chr5 (409-486)||(13908545-13908623)
chr5 (338-380)||(28108308-28108350)
chr5 (367-426)||(11186282-11186341)
chr5 (365-403)||(28445540-28445578)
chr5 (342-412)||(43388189-43388259)
[»] chr3 (32 HSPs)
chr3 (333-466)||(47739998-47740131)
chr3 (336-485)||(50716215-50716364)
chr3 (336-485)||(50796483-50796632)
chr3 (336-508)||(3902824-3903002)
chr3 (333-486)||(38977794-38977947)
chr3 (342-485)||(51540661-51540804)
chr3 (333-484)||(35142037-35142185)
chr3 (340-508)||(46622802-46622977)
chr3 (333-486)||(39149770-39149922)
chr3 (337-485)||(33438486-33438633)
chr3 (358-508)||(501159-501315)
chr3 (333-485)||(3352113-3352266)
chr3 (361-485)||(34821390-34821514)
chr3 (336-486)||(47301982-47302133)
chr3 (333-438)||(34821490-34821595)
chr3 (336-486)||(2358668-2358819)
chr3 (333-466)||(51258363-51258495)
chr3 (336-485)||(28872966-28873117)
chr3 (365-484)||(52777223-52777342)
chr3 (333-402)||(47123066-47123135)
chr3 (333-402)||(47130432-47130501)
chr3 (333-449)||(48303951-48304067)
chr3 (383-486)||(43473015-43473118)
chr3 (340-439)||(45244356-45244455)
chr3 (340-430)||(3937355-3937445)
chr3 (333-485)||(49096274-49096425)
chr3 (367-508)||(30721822-30721974)
chr3 (359-409)||(42936686-42936736)
chr3 (375-449)||(32024985-32025059)
chr3 (437-485)||(27143463-27143511)
chr3 (359-394)||(33700775-33700810)
chr3 (414-459)||(47980080-47980125)
[»] scaffold0027 (1 HSPs)
scaffold0027 (333-508)||(141981-142161)
[»] scaffold0137 (1 HSPs)
scaffold0137 (336-486)||(9543-9693)
[»] scaffold0508 (1 HSPs)
scaffold0508 (333-485)||(3442-3596)
[»] scaffold0182 (1 HSPs)
scaffold0182 (343-471)||(23092-23220)
[»] scaffold0018 (1 HSPs)
scaffold0018 (91-181)||(170686-170779)
[»] scaffold0010 (1 HSPs)
scaffold0010 (333-377)||(140568-140612)


Alignment Details
Target: scaffold0202 (Bit Score: 142; Significance: 3e-74; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 5145 - 4910
Alignment:
Q  1 taaatattggagtttcttcttctactgtaaccttgtgcatgagtttagacttgtaactttggttttctcttaagatatgtagt-ataccgcaacaagtcc 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| ||||||||||    
T  5145 taaatattcgagtttcttcttctactgtaaccttgtgcatgagtttagacttgtaactttggttttctcttaaggtatgcagtaataccacaacaagtcc 5046  T
Q  100 cacatcgagtatacgttaaaaca-gcactgaagtt--tttataaaataagagtgtgtatcacttagtaactcatagttggggaccaatctattacttttg 196  Q
    ||||| ||||||||||||||||| ||||||| |||  | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||       
T  5045 cacatagagtatacgttaaaacaggcactgaggtttatctataaaataagagtgtatatcacttattaactcatagttggggaccaatctattactt--- 4949  T
Q  197 ttgtggttgttgctgggaattacaagcgattgcatttttaaataa 241  Q
          |||||||||||||||| ||| ||||||||||||||||||    
T  4948 ------ttgttgctgggaattataagtgattgcatttttaaataa 4910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 7e-63; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 333 - 508
Target Start/End: Complemental strand, 27928140 - 27927959
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  27928140 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatca 27928041  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||||||||||||  |||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  27928040 ggaaaccccctaaacaccatttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 27927959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 8885652 - 8885500
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  8885652 taaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 8885553  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||||||||||| | ||||||||||||||||||||  |||||||||||    
T  8885552 ggaaaccccctaaacacccattttcaaggtaaaacagttcggattatataatc 8885500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 333 - 485
Target Start/End: Original strand, 44106183 - 44106335
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  44106183 taaagggtgaaaaaatgagtaacggatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 44106282  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  44106283 ggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatc 44106335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 42281093 - 42280938
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgtta---catgatgtttccggattatataa 429  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||   |||||||||||| ||||| ||||    
T  42281093 taaagggtgaaaaaatgagtaacggatttttccggatttcgtaatccgaaaacttcaaaaaatagagcgcgttacatcatgatgtttccagattacataa 42280994  T
Q  430 tctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    || ||||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  42280993 tccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatc 42280938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 333 - 486
Target Start/End: Original strand, 34853290 - 34853441
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||    
T  34853290 taaagggtaagaaaatgagta-cgggtttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttccggattaca-aatct 34853387  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||| |||||||| |||||||||||||||||||| |  ||||||||||||    
T  34853388 ggaaaccctctaaacaccctttttcaaggtaaaacagtccggattatataatcc 34853441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 336 - 468
Target Start/End: Original strand, 3094644 - 3094776
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||    
T  3094644 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccggattacataatccgga 3094743  T
Q  436 aaccccctaaacactctttttcaaggtaaaaca 468  Q
    ||||||||||||||  |||||||||||||||||    
T  3094744 aaccccctaaacaccatttttcaaggtaaaaca 3094776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 336 - 508
Target Start/End: Original strand, 37248521 - 37248699
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  ||    
T  37248521 agggtgaaaaatggagttacgggtttttctggattttgtaatccgaaaacttaaaaaaatagggcgcgttagatgatgtttccggattacataatccaga 37248620  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    ||||||||||||||  ||||||||||||||||||||   ||||||||||||      || |||||||||||||||||||    
T  37248621 aaccccctaaacaccatttttcaaggtaaaacagtttgaattatataatccgaattgtatcagcacaaattctaaacat 37248699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 31520088 - 31519938
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| |||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  31520088 agggtgaaaaatggagttacggctttttccggattttgtaatccagaaacttcaaaaaatagagcgcgttacatgatgtttccggattacataatccgga 31519989  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||||||||| |||||| ||||||||| |||||  ||||||||||||    
T  31519988 aaccccctaaacacccttttttaaggtaaaatagttcggattatataatcc 31519938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 337 - 508
Target Start/End: Original strand, 16310563 - 16310740
Alignment:
Q  337 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaa 436  Q
    ||||||||||  |||| || |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||| | ||||  |||    
T  16310563 gggtgaaaaatggagttacaggtttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttagatgatttttccggattacacaatccagaa 16310662  T
Q  437 accccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    || |||||||||| ||||||||||||||||||||||| ||||||||||||      || |||||||||||||||||||    
T  16310663 actccctaaacaccctttttcaaggtaaaacagttcaaattatataatccgaactatatcagcacaaattctaaacat 16310740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 333 - 463
Target Start/End: Original strand, 28916743 - 28916873
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||| |||| |     
T  28916743 taaagggtgaaaaaatgggtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttaaatgatgtttctggattacataaacc 28916842  T
Q  433 ggaaaccccctaaacactctttttcaaggta 463  Q
    ||||||||||||||||| |||| | ||||||    
T  28916843 ggaaaccccctaaacaccctttcttaaggta 28916873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 508
Target Start/End: Original strand, 21004353 - 21004525
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| |||||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||||| |||||| | |    
T  21004353 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaactttaaaaaataaggcgcgttacat-atgtttccggattacataatccgaa 21004451  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc-taacagcacaaattctaaacat 508  Q
    ||| ||||||||||  ||||| ||||||||| |||||  |||||||||||| || ||| |||||| ||||||||    
T  21004452 aactccctaaacaccattttttaaggtaaaatagttcggattatataatccgtatcagtacaaatcctaaacat 21004525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 386 - 508
Target Start/End: Original strand, 40994805 - 40994933
Alignment:
Q  386 ttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||  |||||||||||    
T  40994805 ttcaaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccctttatcaaggtaaaacagttcggattatataatc 40994904  T
Q  486 c------taacagcacaaattctaaacat 508  Q
    |      || |||||||||||||||||||    
T  40994905 cgaactgtatcagcacaaattctaaacat 40994933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 333 - 483
Target Start/End: Original strand, 9073464 - 9073614
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||| ||||||||||||||||  |||| |||||||  ||||||| ||||||||||||||| |   ||||||||||||||||||||||| ||||||     
T  9073464 taaagggttaaaaaatgagtaacggactttttcggatttgttaatccggaaacttcaaaaaataagattcgttacatgatgtttccggattacataatcc 9073563  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataa 483  Q
     ||||||||||||||||  |||||||| || ||| |||||  |||||||||    
T  9073564 agaaaccccctaaacaccttttttcaaagtgaaatagttcggattatataa 9073614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 36404353 - 36404232
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||||||  ||||||||||||||| |||||||||| ||| ||||||||||||||     
T  36404353 taaagggtgaaaaaatgagttacggattattccggattttgtaatccgaaaatctcaaaaaatagggcgtgttacatgat-ttttcggattatataatc- 36404256  T
Q  433 ggaaaccccctaaacactcttttt 456  Q
     |||| | ||||||||| ||||||    
T  36404255 cgaaaactcctaaacacccttttt 36404232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 41530629 - 41530753
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatga-tgtttccggattatataatc 431  Q
    ||||||||| |||||||||| |||| |||||||| ||||||||||||| |||  ||||||||||||||||||||||||| | ||| | ||||| ||||||    
T  41530629 taaagggtggaaaaatgagttacggatttttccgaattttgtaatccggaaatctcaaaaaatagggcgcgttacatgatttttttcagattacataatc 41530728  T
Q  432 tggaaaccccctaaacactcttttt 456  Q
    || | |||||||||| || ||||||    
T  41530729 tgaacaccccctaaaaacccttttt 41530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 445
Target Start/End: Complemental strand, 35676711 - 35676625
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaa 445  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| || ||||| ||||||||||| |||||| | | |||||||||    
T  35676711 tttttccggattttgtaatccggaaactacaaaaaatagggcgcgctatatgatttttccggattacataatccgaacaccccctaa 35676625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 367 - 436
Target Start/End: Complemental strand, 11698451 - 11698382
Alignment:
Q  367 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaa 436  Q
    |||||||||||||| ||||||||||||||| | || |||||||||||||||||||||| |||||| ||||    
T  11698451 gattttgtaatccggaaacttcaaaaaataagacgtgttacatgatgtttccggattacataatccggaa 11698382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 458
Target Start/End: Complemental strand, 17120053 - 17119954
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 458  Q
    ||||| |||||| | |||||||||||||||||||||| ||||||| ||  |||| ||| ||| |||||||||||| | ||||| |||||||  |||||||    
T  17120053 ttttttcggattatataatccgaaaacttcaaaaaattgggcgcgctatttgattttttcggtttatataatctgaacaccccttaaacaccatttttca 17119954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 456
Target Start/End: Complemental strand, 7971193 - 7971073
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatg-tttccggattatataatctgg 434  Q
    |||||||||||  |||| |||| |||||||||||||||||||| | |||||||| |||||||| |||| ||| ||||| |||| |||||| ||||||       
T  7971193 agggtgaaaaacggagttacggatttttccggattttgtaatctggaaacttca-aaaataggacgcgctacgtgatgttttctggattacataatccaa 7971095  T
Q  435 aaaccccctaaacactcttttt 456  Q
    | ||||| ||||||| ||||||    
T  7971094 acaccccataaacacccttttt 7971073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 449
Target Start/End: Original strand, 33472059 - 33472143
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 449  Q
    |||||| | |||||||||||| ||||||||||||||||| ||  |||| ||| ||||||||| |||||    |||||||||||||    
T  33472059 cggattctataatccgaaaacctcaaaaaatagggcgcgctatttgattttttcggattatagaatctaaccaccccctaaacac 33472143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 4259788 - 4259702
Alignment:
Q  381 aaaacttcaaaaaa-tagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaa 466  Q
    |||||||||||||| ||||||| ||| | |||| ||| ||||||||||||| ||   |||||||||||||  |||||||||| ||||    
T  4259788 aaaacttcaaaaaaatagggcgtgttccttgattttttcggattatataatttgagcaccccctaaacaccatttttcaagggaaaa 4259702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 407
Target Start/End: Complemental strand, 10840923 - 10840881
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttac 407  Q
    |||||||| |||||||||||| |||||||||||||||| ||||    
T  10840923 cggattttataatccgaaaacctcaaaaaatagggcgcattac 10840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 443 - 485
Target Start/End: Complemental strand, 14164146 - 14164104
Alignment:
Q  443 taaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||| ||||||||||||||||||||||  |||||||||||    
T  14164146 taaacaccctttttcaaggtaaaacagttcggattatataatc 14164104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 485
Target Start/End: Original strand, 40392526 - 40392648
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatga-tgtttccggattatataatctggaaaccccctaaacactctttttcaa-ggt 462  Q
    |||||||| |||||| ||||||||||||||||||||| || || ||| | ||| ||||| |||||||| | | || | || ||||| | ||||||| ||     
T  40392526 cggattttataatccaaaaacttcaaaaaatagggcgtgtcacttgatttttttcggatgatataatccgaacactctctgaacacccgttttcaaggga 40392625  T
Q  463 aaaacagttcatattatataatc 485  Q
    ||||||||||  |||||||||||    
T  40392626 aaaacagttcggattatataatc 40392648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 485
Target Start/End: Original strand, 6395075 - 6395196
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 464  Q
    |||||||| |||||| ||||| |||||||||||| |||| ||| | || ||| | ||| ||||||||   | | ||| ||||||| ||||||||||| ||    
T  6395075 cggattttataatccaaaaacctcaaaaaataggacgcgctacttaattttttctgatcatataatccaaacaacccttaaacaccctttttcaaggaaa 6395174  T
Q  465 a-acagttcatattatataatc 485  Q
    | ||||| || |||||||||||    
T  6395175 agacagtgcaaattatataatc 6395196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 2e-60; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 333 - 508
Target Start/End: Original strand, 19835488 - 19835669
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||||| ||||||     
T  19835488 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaactttgaaaaatagggtgcgttacatgatgtttccggattacataatcc 19835587  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  19835588 ggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 19835669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 25491594 - 25491442
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||     
T  25491594 taaagggtgaaaaaatgagtaacgagttttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatcc 25491495  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    |||||||||||||||||  ||||||||||||||||| |||  |||||||||||    
T  25491494 ggaaaccccctaaacaccttttttcaaggtaaaacaattcggattatataatc 25491442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 333 - 492
Target Start/End: Complemental strand, 17933336 - 17933177
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||| |||||||| |||||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17933336 taaagggtgcaaaaatgaataacggatttttccagattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatct 17933237  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcctaacag 492  Q
    ||||||||| ||||||| |||||| |||||||||||||||  |||||||||||| |||||    
T  17933236 ggaaaccccttaaacacccttttttaaggtaaaacagttcggattatataatccgaacag 17933177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 336 - 508
Target Start/End: Complemental strand, 55052815 - 55052637
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| ||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||| |||    
T  55052815 agggtgaaaaatggagttacgggtttttccggattatgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattatataatccgga 55052716  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  55052715 aaccccctaaacaccctttttcaaggtaaaacagttcgaattatataatccgaactttatcagcacaaattctaaacat 55052637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 54631662 - 54631509
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||||     
T  54631662 taaagggtggaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaagtatggcgcgttacatgatgtttccggattacataatcc 54631563  T
Q  433 ggaaaccccctaaacac-tctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||||||||||| | |||||||||||||||||||||  |||||| ||||    
T  54631562 ggaaaccccctaaacacatttttttcaaggtaaaacagttcggattatacaatc 54631509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 333 - 485
Target Start/End: Original strand, 7931626 - 7931777
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||     
T  7931626 taaagggtgaaaaaatgagtaacgggtttttccggattttgcaatccggaaacttcaaaaaatagggcgcgttacattatgtttccggattacataatcc 7931725  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||||||||||| | || |||| ||||||||||||  |||||||||||    
T  7931726 ggaaaccccctaaacac-ccttctcaatgtaaaacagttcggattatataatc 7931777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 333 - 508
Target Start/End: Original strand, 40703631 - 40703813
Alignment:
Q  333 taaagggtgaaaa-aatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 431  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||||||||| || ||||||||||||||||||||| |||| |    
T  40703631 taaagggtgaaaagaatgagtaacggatttttccggattttgtaatccggaaatttcaaaaaatagggtgcattacatgatgtttccggattacataacc 40703730  T
Q  432 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    || ||||||||||||||| ||||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  40703731 tgaaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 40703813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 342 - 508
Target Start/End: Complemental strand, 46440464 - 46440292
Alignment:
Q  342 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 441  Q
    ||||||||| ||||||||||||||| ||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  46440464 aaaaaatgaataacgggtttttccgaattttataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaacccc 46440365  T
Q  442 ctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  46440364 ctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactatatcagcacaaattctaaacat 46440292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 333 - 508
Target Start/End: Complemental strand, 48319263 - 48319082
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||     
T  48319263 taaagggtgaaaaaatgagtgacggatttttccggattt-gtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatcc 48319165  T
Q  433 ggaaaccccctaaaca-ctctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    | |||||||||||||| || |||||||||||||||||| ||  ||||||||||||      || |||||||||||||||||||    
T  48319164 gaaaaccccctaaacacctttttttcaaggtaaaacagctcggattatataatccgaactgtatcagcacaaattctaaacat 48319082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 336 - 485
Target Start/End: Original strand, 38536141 - 38536290
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||   ||| |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||| |||||| |||    
T  38536141 agggtgaaaaatgaagttacgggtttttccggattttgtaattcggaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccgga 38536240  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||||||||  |||||||||||||||||||||  |||||||||||    
T  38536241 aaccccctaaacaccttttttcaaggtaaaacagttcggattatataatc 38536290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 336 - 508
Target Start/End: Original strand, 29822590 - 29822768
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||| |||||| |||    
T  29822590 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatacagcgcgttacatgatgttttcggattacataatccgga 29822689  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||| ||||||| || ||||||||||||||| |||  ||||||||||||      || |||||||||||||||||||    
T  29822690 aaccccataaacaccctctttcaaggtaaaacaattcggattatataatccgaactgtatcagcacaaattctaaacat 29822768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 342 - 486
Target Start/End: Complemental strand, 25752634 - 25752490
Alignment:
Q  342 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 441  Q
    ||||||||||||| || |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||| |||||| | |||||||    
T  25752634 aaaaaatgagtaatggatttttccggattttgtaatccggaaatttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaacccc 25752535  T
Q  442 ctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
     ||||||| ||||||||||||||||||||||  ||||||| ||||    
T  25752534 ataaacaccctttttcaaggtaaaacagttcggattatatgatcc 25752490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 338 - 463
Target Start/End: Complemental strand, 25539142 - 25539017
Alignment:
Q  338 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa 437  Q
    |||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||| |||||| |||||| |||||    
T  25539142 ggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttctggattacataatccggaaa 25539043  T
Q  438 ccccctaaacactctttttcaaggta 463  Q
    ||||||||||||| ||||||||||||    
T  25539042 ccccctaaacactatttttcaaggta 25539017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 333 - 486
Target Start/End: Complemental strand, 2506232 - 2506077
Alignment:
Q  333 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaata-gggcgcgttacatgatgtttccggattatataat 430  Q
    ||||||||||||||| |||||||||| |||||||  ||||||| || |  |||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  2506232 taaagggtgaaaaaaatgagtaacggatttttccaaattttgtgattcagaaacatcaaaaaataagggcgcgttacatgatgtttccggattacataat 2506133  T
Q  431 ctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    | ||||||||||||||||| |||||||||||||||||||||   ||||||||||||    
T  2506132 ccggaaaccccctaaacaccctttttcaaggtaaaacagtttggattatataatcc 2506077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 336 - 486
Target Start/End: Original strand, 23523877 - 23524028
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||  ||    
T  23523877 agggtgaaaaatggagttacggattttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccaga 23523976  T
Q  436 aaccccctaaacactc-tttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||||||||| | ||||| ||||||||| | |||  ||||||||||||    
T  23523977 aaccccctaaacaccctttttttaaggtaaaataattcggattatataatcc 23524028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 486
Target Start/End: Original strand, 32441782 - 32441931
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| | || |||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  32441782 agggtgaaaaatggagttaaggatttttctggattttgtaatccggaaacttcaaaaaatagcgcgcgttacatgatgtttccggattacataatccgga 32441881  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    || |||||||||||  ||||| ||||||||| |||||  ||||||||||||    
T  32441882 aa-cccctaaacacatttttttaaggtaaaatagttcggattatataatcc 32441931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 336 - 466
Target Start/End: Complemental strand, 3703446 - 3703316
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| || |||||||||| ||| ||||||| |||||  | |    
T  3703446 agggtgaaaaaatgagttacggattttttcggattttgtaatccgaaaacttcaaaaaataggacgtgttacatgattttttcggattacataattcgaa 3703347  T
Q  436 aaccccctaaacactctttttcaaggtaaaa 466  Q
     |||||||||||||  |||||||||| ||||    
T  3703346 caccccctaaacaccatttttcaagggaaaa 3703316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 360 - 486
Target Start/End: Original strand, 8106387 - 8106514
Alignment:
Q  360 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttc-a 458  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||| | | |||||||||||||  |||||| |    
T  8106387 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgctacatgatttttccgtattacataatccgaacaccccctaaacaccatttttcta 8106486  T
Q  459 aggtaaaacagttcatattatataatcc 486  Q
     || |||| |||||| ||||||||||||    
T  8106487 gggaaaaatagttcagattatataatcc 8106514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 333 - 415
Target Start/End: Complemental strand, 53894190 - 53894108
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtt 415  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  53894190 taaagggtgaaaaaatgactaacgggtttttccggattttgcaatcaggaaacttcaaaaaatagggcgcgttacatgatgtt 53894108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 365 - 486
Target Start/End: Original strand, 34972864 - 34972985
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 464  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||||| |||| || |||||| | |||||||||||||||  ||||| |||||||    
T  34972864 cggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcggactacataatccgaaaaccccctaaacaccattttttaaggtaa 34972963  T
Q  465 aacagttcatattatataatcc 486  Q
    || |||||  ||||||||||||    
T  34972964 aatagttcggattatataatcc 34972985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 382 - 482
Target Start/End: Complemental strand, 41413249 - 41413150
Alignment:
Q  382 aaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatat 481  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| |||||  |||||||    
T  41413249 aaacttcaaaaaatagga-gcgttacatgatgtttccggattacataatccggaaaccccctaaacactcttttttaaggtaaaatagttcggattatat 41413151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 6229007 - 6228859
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||  |||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||   |||  |||    
T  6229007 agggtgaaaaatggagctacggatttttccggattttgtaacccggaaacttcaaaaaatagggcgcgttacatgatgtttccggatta---aattcgga 6228911  T
Q  436 aaccccctaaacactc--tttttcaaggtaaaacagttcatattatataatcc 486  Q
    || ||||||||||| |  ||||| ||||||||| |||||  ||||||||||||    
T  6228910 aa-cccctaaacacccctttttttaaggtaaaatagttcggattatataatcc 6228859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 394 - 485
Target Start/End: Complemental strand, 31582560 - 31582469
Alignment:
Q  394 atagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||| ||||||||||||| | ||||| |||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  31582560 atagggcgcattacatgatgttttctgattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatc 31582469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 6003869 - 6003719
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaat--agggcgcgttacatgatgtttccggattatataatctg 433  Q
    |||||||||||  |||| |||| ||||| || ||||| ||||||| |||||| ||||||   || | |||||||||||||||||||||||| |||||| |    
T  6003869 agggtgaaaaatggagttacggattttttcgaattttataatccggaaacttaaaaaaaataagagtgcgttacatgatgtttccggattacataatccg 6003770  T
Q  434 gaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||||||||||| |||||| ||||||||| |||||  ||||||||||||    
T  6003769 gaaaccccctaaacac-cttttt-aaggtaaaatagttcggattatataatcc 6003719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 336 - 483
Target Start/End: Original strand, 49396979 - 49397126
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||  |||||| |||||| | |    
T  49396979 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaataggatgcgttacaagatgtttttggattacataatccgaa 49397078  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataa 483  Q
    || ||| ||||||   ||||| || |||||| |||||  |||||||||    
T  49397079 aatcccttaaacatcattttttaatgtaaaatagttcggattatataa 49397126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 38416536 - 38416650
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||||||||  ||| ||||| |  ||||||||||||| |||| | |||||||||||| ||||||||||| ||| ||||||| |||||| | |    
T  38416536 agggtgaaaaaatgagttgcggattttttcaaattttgtaatccggaaacataaaaaaatagggcacgttacatgattttttcggattacataatccgaa 38416635  T
Q  436 aaccccctaaacact 450  Q
     ||||||||||||||    
T  38416636 caccccctaaacact 38416650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 50392599 - 50392529
Alignment:
Q  342 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 412  Q
    ||||||||||| |||| |||||||||||||||||||||| |||  ||||||||| ||||||||||||||||    
T  50392599 aaaaaatgagttacggatttttccggattttgtaatccggaaatctcaaaaaatggggcgcgttacatgat 50392529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 52077012 - 52077082
Alignment:
Q  414 tttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat 484  Q
    ||||||||| | |||||| ||||||| |||||| ||  |||||||||||||||||||||| ||||||||||    
T  52077012 tttccggatcacataatccggaaacctcctaaataccatttttcaaggtaaaacagttcagattatataat 52077082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 5865248 - 5865208
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgtt 405  Q
    |||||||| ||||| ||||| ||||||||||||||||||||    
T  5865248 cggattttataatctgaaaatttcaaaaaatagggcgcgtt 5865208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 55781542 - 55781602
Alignment:
Q  45 ttagacttgtaactttggttttctcttaagatatgtagtataccgcaacaagtcccacatc 105  Q
    ||||||||| ||||||| |||||| || |||  ||| ||||||| ||||||||||||||||    
T  55781542 ttagacttgaaactttgattttcttttcagacgtgtggtataccacaacaagtcccacatc 55781602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 55845722 - 55845782
Alignment:
Q  45 ttagacttgtaactttggttttctcttaagatatgtagtataccgcaacaagtcccacatc 105  Q
    ||||||||| ||||||| |||||| || |||  ||| ||||||| ||||||||||||||||    
T  55845722 ttagacttgaaactttgattttcttttcagacgtgtggtataccacaacaagtcccacatc 55845782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 1e-58; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 333 - 484
Target Start/End: Original strand, 39447122 - 39447273
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  39447122 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatct 39447221  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat 484  Q
    ||||||||| ||||||| |||||||||||||||| |||||  ||||||||||    
T  39447222 ggaaaccccataaacaccctttttcaaggtaaaatagttcggattatataat 39447273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 333 - 484
Target Start/End: Complemental strand, 45153985 - 45153834
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  45153985 taaagggtgaaaaaatgagtaacgggtttttctgaattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 45153886  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat 484  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  45153885 ggaaaccccctaaacaccctttttcaaggtaaaacagtttagattatataat 45153834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 333 - 486
Target Start/End: Complemental strand, 17474993 - 17474840
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||     
T  17474993 taaaaggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaactttaaaaaatagggcgcgttacatgatgtttccggattacataatcc 17474894  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||||||||||||  ||||||||||||||||||||   ||||||||||||    
T  17474893 ggaaaccccctaaacacaatttttcaaggtaaaacagtttggattatataatcc 17474840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 333 - 508
Target Start/End: Complemental strand, 44465922 - 44465740
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat-gtttccggattatataatc 431  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  |||||| ||| ||    
T  44465922 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatagtttatggattacatactc 44465823  T
Q  432 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
     ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  44465822 cggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaaatgtatcagcacaaattctaaacat 44465740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 333 - 508
Target Start/End: Complemental strand, 33452637 - 33452456
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| | ||||||     
T  33452637 taaagggtggaaaaatgagtaacggatttttctggattttgtaattcggaaacttcaaaaaatagggcgcgttacatgatgtttccggatcacataatcc 33452538  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcctaac------agcacaaattctaaacat 508  Q
    |||||| |||||||||| ||||||||||||||||||||||  |||||||||||| |||      ||||||||||||||||||    
T  33452537 ggaaactccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtattagcacaaattctaaacat 33452456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 333 - 484
Target Start/End: Complemental strand, 25217984 - 25217834
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||     
T  25217984 taaagggtgaaaaaatgagtaacggattttttcggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatcc 25217885  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat 484  Q
    ||||| ||||||||||| | ||||||||||||||||||||  ||||||||||    
T  25217884 ggaaa-cccctaaacaccccttttcaaggtaaaacagttcggattatataat 25217834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 333 - 486
Target Start/End: Complemental strand, 32188064 - 32187910
Alignment:
Q  333 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 431  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  32188064 taaagggtgaaaaaaatgagtaacgggtttttctggattttgtaatctggaaacttcaaaaaatagggcgagttacatgatgtttccggattacataatc 32187965  T
Q  432 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
     |||||||||| ||||||  |||||||||||||||||||||  ||||||||||||    
T  32187964 cggaaacccccgaaacaccatttttcaaggtaaaacagttcggattatataatcc 32187910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 333 - 484
Target Start/End: Complemental strand, 15995308 - 15995156
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttccggattatataatc 431  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  15995308 taaagggtgaaaaaattagtaacgggtttttccggattttgtaatcgggaaacttcaaaaaaatagggcgcgttgcatgatgtttccggattacataatc 15995209  T
Q  432 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat 484  Q
     | ||||||||||||||| |||||||||| |||||||||||  ||||||||||    
T  15995208 cgaaaaccccctaaacaccctttttcaagctaaaacagttcggattatataat 15995156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 334 - 485
Target Start/End: Complemental strand, 41510622 - 41510470
Alignment:
Q  334 aaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||| |||||||||| ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  41510622 aaagggtgaaaaaaatgagtaacggatttttccagatttcgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatct 41510523  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||||||||||| | |||||||||||||||||| |  |||||||||||    
T  41510522 ggaaaccccctaaacaccccttttcaaggtaaaacagtccggattatataatc 41510470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 349 - 468
Target Start/End: Complemental strand, 4268416 - 4268297
Alignment:
Q  349 gagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaaca 448  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  4268416 gagtaatgggttttttcggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaaca 4268317  T
Q  449 ctctttttcaaggtaaaaca 468  Q
    | ||||||||||||||||||    
T  4268316 ccctttttcaaggtaaaaca 4268297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 365 - 484
Target Start/End: Complemental strand, 41855061 - 41854942
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 464  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||    
T  41855061 cggattttgtaatccggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacatgatccggaaaccccctaaacaccctttttcaaggtaa 41854962  T
Q  465 aacagttcatattatataat 484  Q
    ||||||||  ||||||||||    
T  41854961 aacagttcggattatataat 41854942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 36949136 - 36948986
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||    
T  36949136 agggtgaaaaatggagttacggatttttccggattttgtaatctgcaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccgga 36949037  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||||||||||||  ||| | ||||||||| ||||   ||||||||||||    
T  36949036 aaccccctaaacaccatttgttaaggtaaaatagtttggattatataatcc 36948986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 365 - 486
Target Start/End: Original strand, 36874977 - 36875098
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 464  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||| || |||||  |||||||||||||    
T  36874977 cggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccctctgaacaccatttttcaaggtaa 36875076  T
Q  465 aacagttcatattatataatcc 486  Q
    |||||| |  ||||||||||||    
T  36875077 aacagtccggattatataatcc 36875098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 365 - 508
Target Start/End: Original strand, 42894369 - 42894518
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 464  Q
    |||||| | ||||||| |||||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||    
T  42894369 cggattatataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaa 42894468  T
Q  465 aacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||| |  |||||||| |||      || |||||||||||||||||||    
T  42894469 aacagtccggattatatattccgaactgtatcagcacaaattctaaacat 42894518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 338 - 449
Target Start/End: Original strand, 5507381 - 5507494
Alignment:
Q  338 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatga--tgtttccggattatataatctgga 435  Q
    ||||||||||||||| || | ||||| || |||||||||||| |||||||||||||||| | ||||||||||||  | ||| |||||||||||||| | |    
T  5507381 ggtgaaaaaatgagttacagattttttcgaattttgtaatccaaaaacttcaaaaaataagacgcgttacatgattttttttcggattatataatccgaa 5507480  T
Q  436 aaccccctaaacac 449  Q
     |||||||||||||    
T  5507481 caccccctaaacac 5507494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 333 - 431
Target Start/End: Complemental strand, 9847619 - 9847521
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 431  Q
    ||||| |||||||||||||| || | ||||||| ||||||||||||||||||  ||||||||| |||||||||||||||| ||| || |||| ||||||    
T  9847619 taaagagtgaaaaaatgagttactgatttttccagattttgtaatccgaaaatctcaaaaaattgggcgcgttacatgattttttcgtattacataatc 9847521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 338 - 508
Target Start/End: Original strand, 34517066 - 34517242
Alignment:
Q  338 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa 437  Q
    ||||||||||||||| |||  ||||| ||||||||||||||  ||||  |||||||||||||||||||||||||| ||| ||||||| ||||||   | |    
T  34517066 ggtgaaaaaatgagttacgaattttttcggattttgtaatcgaaaaatctcaaaaaatagggcgcgttacatgat-ttttcggattacataatccaaata 34517164  T
Q  438 ccccctaaacactctttttcaa-ggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||| |||||||  |||||||| || |||||||||   ||||||||||||      || |||||||||||||||||||    
T  34517165 ccccttaaacaccatttttcaagggaaaaacagtttggattatataatccgaactgtatcagcacaaattctaaacat 34517242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 365 - 449
Target Start/End: Original strand, 33366920 - 33367003
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 449  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||| ||||||||||| |||||| | ||||||||| |||||    
T  33366920 cggattttgtaatccgaaaacttcaaaaa-taagacgcgttacatgatatttccggattacataatccgaaaacccccttaacac 33367003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 38308954 - 38308890
Alignment:
Q  367 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 431  Q
    |||| |||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||    
T  38308954 gattatgtaatccgaaaacttcaaaaaatagggcgcgctatttgatttttccggattatataatc 38308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 492
Target Start/End: Complemental strand, 38066834 - 38066708
Alignment:
Q  366 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaac-cccctaaacactctttttcaa-ggta 463  Q
    ||||||| |||||||||||||||||||||||||| | |||| ||||| ||| ||||||| |||| |   |||| ||| ||||||| | ||||||| || |    
T  38066834 ggattttataatccgaaaacttcaaaaaatagggtgtgttatatgattttttcggattacataacc--caaacacccataaacaccccttttcaagggaa 38066737  T
Q  464 aaacagttcatattatataatcctaacag 492  Q
    |||||||||||||||||||| || |||||    
T  38066736 aaacagttcatattatataaaccgaacag 38066708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 483
Target Start/End: Complemental strand, 41203354 - 41203230
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttc-aaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttc 457  Q
    |||||||||||||||||||||| ||||| | ||||||||||| ||  ||||| || |||| |||||| |||||| | | ||||| ||||||| ||||||     
T  41203354 tttttccggattttgtaatccggaaactacaaaaaaatagggtgc--tacataatttttctggattacataatccgaacaccccgtaaacacccttttta 41203257  T
Q  458 aag-gtaaaacagttcatattatataa 483  Q
    ||| | ||||||||||| |||||||||    
T  41203256 aagagaaaaacagttcagattatataa 41203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 431
Target Start/End: Original strand, 25715323 - 25715423
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttc--cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataat 430  Q
    |||||||||||||||||||| ||   |||||   |||| |||||||||| ||||  |||||| |||||||||||||| |||| ||| ||||||| |||||    
T  25715323 taaagggtgaaaaaatgagttacaaattttttttcggactttgtaatccaaaaatctcaaaagatagggcgcgttacctgattttttcggattacataat 25715422  T
Q  431 c 431  Q
    |    
T  25715423 c 25715423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 466
Target Start/End: Complemental strand, 19110176 - 19110076
Alignment:
Q  366 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaa 465  Q
    ||||||| |||||| ||||  | ||||||||||||| ||| | |||| ||| | ||||||| ||||||   ||||||||||||| ||||||||||| |||    
T  19110176 ggattttataatccaaaaatctgaaaaaatagggcgtgttccttgattttttctgattatagaatctgatcaccccctaaacaccctttttcaagggaaa 19110077  T
Q  466 a 466  Q
    |    
T  19110076 a 19110076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 374 - 426
Target Start/End: Original strand, 34817092 - 34817144
Alignment:
Q  374 taatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattata 426  Q
    |||| ||||||| |||||||||||| || ||||| |||||||| |||||||||    
T  34817092 taattcgaaaacctcaaaaaataggacgtgttacttgatgttttcggattata 34817144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 4e-58; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 333 - 508
Target Start/End: Complemental strand, 28230666 - 28230486
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||     
T  28230666 taaagggt-aaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacttgatgtttccggattacataatcc 28230568  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  28230567 ggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 28230486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 333 - 486
Target Start/End: Original strand, 3936068 - 3936221
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  3936068 taaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 3936167  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
      ||||||||||||||| |||||||||||||||||||| |  ||||||||||||    
T  3936168 aaaaaccccctaaacaccctttttcaaggtaaaacagtccgaattatataatcc 3936221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 336 - 508
Target Start/End: Complemental strand, 24042384 - 24042206
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||| |||    
T  24042384 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaataaggcgcgttacatgatgtttccggattacataatccgga 24042285  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    ||||||||||||||  |||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  24042284 aaccccctaaacaccatttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 24042206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 333 - 484
Target Start/End: Original strand, 43737084 - 43737234
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||     
T  43737084 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatcc 43737183  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat 484  Q
    ||||||||||||||||| |||||| ||||||||| |||||  ||||||||||    
T  43737184 ggaaaccccctaaacacccttttt-aaggtaaaatagttcggattatataat 43737234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 336 - 486
Target Start/End: Original strand, 36629168 - 36629318
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  36629168 agggtgaaaaaatgagtaacggatttttccggattttgtaatctggtaacttaaaaaaatagggcgcgttacatgatgtttccggattacataatctgga 36629267  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||| ||||||||  ||||| |||||||||||||||  ||||||||||||    
T  36629268 aaccctctaaacaccattttttaaggtaaaacagttcggattatataatcc 36629318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 336 - 486
Target Start/End: Original strand, 47202457 - 47202607
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  47202457 agggtgaaaaatggagttacggatttttccagattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgga 47202556  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||||||||| |||||| ||||||||| |||||  ||||||||||||    
T  47202557 aaccccctaaacacccttttttaaggtaaaatagttcggattatataatcc 47202607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 333 - 486
Target Start/End: Complemental strand, 37518494 - 37518341
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||||  |||||||||||||||||||| ||||||||| |||||||||||| ||||||     
T  37518494 taaagggtgaaaaaataagtaacggatttttccggattttataatccagaaacttcaaaaaatagggcgtgttacatgaagtttccggattacataatcc 37518395  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||||||||||||  |||||||||||||||||||||  ||||||||||||    
T  37518394 ggaaaccccctaaacaccatttttcaaggtaaaacagttcggattatataatcc 37518341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 19225798 - 19225645
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggttttt-ccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 431  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  19225798 taaagggtgaaaaaatgagtaacggattttttccggattttgtaatccaaaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatc 19225699  T
Q  432 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
     ||||| |||||||||||  ||||||||| ||||||| |||  |||||||||||    
T  19225698 cggaaatcccctaaacaccatttttcaagataaaacaattcggattatataatc 19225645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 336 - 484
Target Start/End: Complemental strand, 42925837 - 42925689
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||    
T  42925837 agggtgaaaaatggagttacgggtttttcctgattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatccgga 42925738  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataat 484  Q
    ||||||||||||||  |||||||||||||||||||||  ||||||||||    
T  42925737 aaccccctaaacaccttttttcaaggtaaaacagttcggattatataat 42925689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 338 - 508
Target Start/End: Complemental strand, 36468730 - 36468555
Alignment:
Q  338 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa 437  Q
    |||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||||||| |||||||||||||| | ||||| |||||| |||||    
T  36468730 ggtgaaaaaatgagtaacggatttttccggattttgtaatatggaaacttcaaaaaatagggcgtgttacatgatgttt-cagattacataatccggaaa 36468632  T
Q  438 ccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||||||| |||||||||||||||||||||   ||||||||||||      || |||||||||||||||||||    
T  36468631 ccccctaaacaccctttttcaaggtaaaacagtttgaattatataatccgaactgtatcagcacaaattctaaacat 36468555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 328 - 508
Target Start/End: Original strand, 36408325 - 36408512
Alignment:
Q  328 cttggtaaagggtgaaaa-aatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattata 426  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||| |    
T  36408325 cttgttaaagggtgaaaaaaatgagtaacggatttttccggattttgtaatccagaaacttcaaaaaataaggcgcgatacatgatgtttccggattaca 36408424  T
Q  427 taatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    ||||| ||||||| | |||||||  | |||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  36408425 taatccggaaacctcataaacaccatctttcaaggtaaaacagttcgaattatataatccgaactgtatcagcacaaattctaaacat 36408512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 354 - 485
Target Start/End: Original strand, 8154880 - 8155011
Alignment:
Q  354 acgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctt 453  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||| |||    
T  8154880 acggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaaccccctaaacaccctt 8154979  T
Q  454 tttcaaggtaaaacagttcatattatataatc 485  Q
    ||| ||||||||| |||||  |||||||||||    
T  8154980 ttttaaggtaaaatagttcggattatataatc 8155011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 485
Target Start/End: Original strand, 31643004 - 31643153
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| |||||| |||| |||||||  | |||||||||||||||||| | |||||||||||||||||||||| |||||| |||    
T  31643004 agggtgaaaaatggagttacggatttttctggatcttgtaatttggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacataatccgga 31643103  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||| |||||| |||||| ||||||||| |||||  |||||||||||    
T  31643104 aaccccccaaacacccttttttaaggtaaaatagttcggattatataatc 31643153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 9151773 - 9151850
Alignment:
Q  332 gtaaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacat 409  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  9151773 gtaaagggtgaaaaaatgagtaacaggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcattacat 9151850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 3304955 - 3304804
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttccggattatataatctgg 434  Q
    |||||||||||  |||| |||| |||||||||||||||||||||  ||||||||||||| ||||| | |||||||||| ||||||||||| ||||||       
T  3304955 agggtgaaaaatggagttacggatttttccggattttgtaatccagaaacttcaaaaaaatagggtgtgttacatgatatttccggattacataatccaa 3304856  T
Q  435 aaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||| |||||| |||||  ||||||||| |||||  ||||||||||||    
T  3304855 aaaccccccaaacacccttttctaaggtaaaatagttcggattatataatcc 3304804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 333 - 424
Target Start/End: Complemental strand, 42877244 - 42877153
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggatta 424  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | ||| |  ||||||||||||||||||||| ||||||||||||||    
T  42877244 taaagggtgaaaaaatgagtaacgtgtttttccggattttgtaatcgggaaaataaaaaaaatagggcgcgttacataatgtttccggatta 42877153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 333 - 484
Target Start/End: Original strand, 33151167 - 33151319
Alignment:
Q  333 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaa-aatagggcgcgttacatgatgtttccggattatataat 430  Q
    ||||||||||||||| |||| ||||| |||||   ||||||||||| || |||||| |||| |||||||||| ||| ||||||| | ||||||| |||||    
T  33151167 taaagggtgaaaaaaatgaggaacggattttta--gattttgtaattcggaaacttaaaaaaaatagggcgcattatatgatgtcttcggattacataat 33151264  T
Q  431 ctggaaaccccctaaacactc-tttttcaaggtaaaacagttcatattatataat 484  Q
    | ||||| ||||||||||||| ||||| |||||||||||||||  ||||||||||    
T  33151265 ccggaaatcccctaaacactcattttttaaggtaaaacagttcggattatataat 33151319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 441
Target Start/End: Complemental strand, 33574200 - 33574125
Alignment:
Q  366 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 441  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||| |||||| | |||||||    
T  33574200 ggattttgtaatccggaaactttaaaaaatagggtgcgttacatgatgttttcggattacataatccgaaaacccc 33574125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 7115444 - 7115354
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 449  Q
    ||||| |||||| | ||||||||| || ||||||||||||| ||||||| |||| ||| || ||||||||||||| |||||||||||||||    
T  7115444 ttttttcggattatataatccgaagacctcaaaaaatagggtgcgttacttgattttttcgaattatataatctgaaaaccccctaaacac 7115354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 486
Target Start/End: Original strand, 6467665 - 6467811
Alignment:
Q  343 aaaaatgagtaacgggtttttccggattttgtaa--tccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccc 440  Q
    |||||||||| |||| |||||||| ||| |||||  |||  |||  ||||||||||||| | |||||||||| | | ||||||| |||||| | | ||||    
T  6467665 aaaaatgagttacggatttttccgaattatgtaaaatccagaaatctcaaaaaatagggtgtgttacatgatttgttcggattacataatccgaacaccc 6467764  T
Q  441 cctaaacactctttttcaa-ggtaaaacagttcatattatataatcc 486  Q
    ||||||||| ||||||||| || ||||||||||  ||||||||||||    
T  6467765 cctaaacaccctttttcaagggaaaaacagttcggattatataatcc 6467811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 426 - 508
Target Start/End: Original strand, 9151849 - 9151937
Alignment:
Q  426 ataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||| ||||||||||||||||  |||||||||||||||||||| || ||||||||||||      || |||||||||||||||||||    
T  9151849 ataatccggaaaccccctaaacatcctttttcaaggtaaaacagtccagattatataatccgaactgtatcagcacaaattctaaacat 9151937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 367 - 461
Target Start/End: Complemental strand, 31985685 - 31985589
Alignment:
Q  367 gattttgtaatccgaaaacttcaaaaaa--tagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaagg 461  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||| ||| ||||||| |||||  | | ||||| |||||||  ||||||||||    
T  31985685 gattttgtaatccgaaaacctcaaaaaaaatagggcgcgttacatgattttttcggattacataattcgaacaccccttaaacaccatttttcaagg 31985589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 448
Target Start/End: Complemental strand, 37218272 - 37218189
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaaca 448  Q
    |||||||| ||||||||||||||||||||||||||| | || | |||| ||| ||||||||||||| || | ||||||| ||||    
T  37218272 cggattttataatccgaaaacttcaaaaaatagggcacattccttgattttttcggattatataatatgaacaccccctgaaca 37218189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 486
Target Start/End: Complemental strand, 42865208 - 42865148
Alignment:
Q  426 ataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||| ||||||||||||||||| | |||||||||||||||||| |  ||||||||||||    
T  42865208 ataatccggaaaccccctaaacaccccttttcaaggtaaaacagtccggattatataatcc 42865148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 26555214 - 26555161
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 412  Q
    ||||| |||||||||||||||||| |   |||||||||||||||||||||||||    
T  26555214 ttttttcggattttgtaatccgaatatcacaaaaaatagggcgcgttacatgat 26555161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 28349283 - 28349227
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttca 389  Q
    |||| ||||||||||||||| |||  |||||| | ||||||||||||||||||||||    
T  28349283 taaatggtgaaaaaatgagttacgaatttttctgaattttgtaatccgaaaacttca 28349227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 48775574 - 48775634
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattat 425  Q
    |||||||| |||| ||||||| ||||||||||||| || |||| |||||||| ||||||||    
T  48775574 cggattttataattcgaaaacctcaaaaaatagggtgcattacttgatgttttcggattat 48775634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 359 - 393
Target Start/End: Complemental strand, 28349226 - 28349192
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaa 393  Q
    ||||||||||||||||||| |||||||||||||||    
T  28349226 tttttccggattttgtaattcgaaaacttcaaaaa 28349192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 28346116 - 28346173
Alignment:
Q  342 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaataggg 399  Q
    ||||||||||| |||| | |||||| ||||||||||||  |||||||||||| |||||    
T  28346116 aaaaaatgagttacggatgtttccgaattttgtaatccagaaacttcaaaaagtaggg 28346173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 2e-57; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 333 - 486
Target Start/End: Complemental strand, 3717482 - 3717329
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3717482 taaagggtgaaaaaatgagtaatgggcttttccgaattttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattatataatct 3717383  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||||| |||||||||  |||||||||||||||||||||  ||||||||||||    
T  3717382 ggaaacctcctaaacacaatttttcaaggtaaaacagttcggattatataatcc 3717329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 336 - 485
Target Start/End: Original strand, 17264373 - 17264522
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  17264373 agggtgaaaaaatgagtaacggatttttccggattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgga 17264472  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    |||||||||||||| |||||||||||||||| |||||  |||||||||||    
T  17264473 aaccccctaaacaccctttttcaaggtaaaatagttcggattatataatc 17264522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 333 - 490
Target Start/End: Complemental strand, 14587759 - 14587602
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||     
T  14587759 taaagggtgaaaaaatgagtaagggatttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttcctgattacataatcc 14587660  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcctaac 490  Q
      |||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||    
T  14587659 ataaaccccctaaacaccatttttcaaggtaaaacagttcggattatataatcataac 14587602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 333 - 468
Target Start/End: Original strand, 7412788 - 7412922
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||     
T  7412788 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggattacataatc- 7412886  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaaca 468  Q
     |||| ||||||||||| ||||||||||||||||||    
T  7412887 cgaaaacccctaaacaccctttttcaaggtaaaaca 7412922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 340 - 508
Target Start/End: Original strand, 32035080 - 32035249
Alignment:
Q  340 tgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacc 439  Q
    |||||||  |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  32035080 tgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacc 32035179  T
Q  440 ccctaaacactctttttcaaggtaaaacagttcatattatataatc-ctaacagcacaaattctaaacat 508  Q
    |||||||||| |||||| ||||||||| |||||  |||||||||||  || |||||||||| ||||||||    
T  32035180 ccctaaacacccttttttaaggtaaaatagttcggattatataatctgtatcagcacaaatcctaaacat 32035249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 336 - 485
Target Start/End: Complemental strand, 4508498 - 4508349
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||||||||||||| |||||||||||||| ||||||  ||| |||||||| ||||||| ||||||||||||||||||||||||||||| |||    
T  4508498 agggtgaaaaaatgagtaacggatttttccggattttataatccagaaatttcaaaaattagggcgtgttacatgatgtttccggattatataatccgga 4508399  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    || ||||||||||   |||||||||||||||||||||  |||||||||||    
T  4508398 aatcccctaaacaacttttttcaaggtaaaacagttcggattatataatc 4508349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 336 - 473
Target Start/End: Original strand, 5699521 - 5699658
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| |||    
T  5699521 agggtgaaaaatggagttacgggttttttcgaattttgtaatccggaaacttgaaaaaatagggcgcgttacatgatgtttccggattacataatccgga 5699620  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttca 473  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  5699621 aaccccctaaacaccctttttcaaggtaatacagttca 5699658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 336 - 508
Target Start/End: Original strand, 23406759 - 23406937
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| ||| ||||||||| |||| |||||||| |||||||||||||||||||||||||  ||||||||| |||||| |||||| |||    
T  23406759 agggtgaaaaatggagttacgagtttttccgaatttcgtaatccggaaacttcaaaaaatagggcgcgttagttgatgtttctggattacataatccgga 23406858  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    ||||||||||||||  |||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  23406859 aaccccctaaacaccatttttcaaggtaaaacagttcgaattatataatccgaactgtatcagcacaaattctaaacat 23406937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 334 - 486
Target Start/End: Complemental strand, 1945727 - 1945576
Alignment:
Q  334 aaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctg 433  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |  |||||||||||||||||||     
T  1945727 aaagggtgaaaaaatgagttacggatttttccggattttgtaatccgaaaacttcaaaaactagggtgcgttacataaattttccggattatataatct- 1945629  T
Q  434 gaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||  ||||||||| |  |||||||||  |||||| |||| ||||||||||||    
T  1945628 gaacacccctaaaccccatttttcaagtgaaaacaattcagattatataatcc 1945576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 336 - 472
Target Start/End: Complemental strand, 33413542 - 33413407
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||  |||||| | ||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  33413542 agggtgaaaaatggagttacgaatttttctgaattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccagattacataatctgga 33413444  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttc 472  Q
    |||||||||||||  ||||||||||||||||||||||    
T  33413443 aaccccctaaacaacctttttcaaggtaaaacagttc 33413407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 336 - 472
Target Start/End: Complemental strand, 2813422 - 2813284
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggat--tttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctg 433  Q
    |||||||||||  |||| || | |||||||||||  ||||||||||| ||||||||||||||| || | |||||||||||||||||||||| |||||| |    
T  2813422 agggtgaaaaatggagttacagatttttccggatattttgtaatccggaaacttcaaaaaataaggtgtgttacatgatgtttccggattacataatccg 2813323  T
Q  434 gaaaccccctaaacactctttttcaaggtaaaacagttc 472  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  2813322 gaaaccccctaaacaccctttttcaaggtaaaacggttc 2813284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 31096398 - 31096251
Alignment:
Q  57 ctttggttttctcttaagatatgtagtataccgcaacaagtcccacatcgagtatacgttaaaaca-gcactgaagttt---ttataaaataagagtgtg 152  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||| | ||||| ||||||   |||||||||||||||||     
T  31096398 ctttggttttctcttaaggtatgtaatataccacaacaagtcccacatcgagtatacgttaaaataggcact-aagttttacttataaaataagagtgta 31096300  T
Q  153 tatcacttagtaactcatagttgggga-ccaatctattacttttgttgt 200  Q
     |||||||| |||| |||||||||||| |||||||| ||||||||||||    
T  31096299 catcacttattaacacatagttggggacccaatctaatacttttgttgt 31096251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 342 - 508
Target Start/End: Complemental strand, 24604552 - 24604379
Alignment:
Q  342 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 441  Q
    ||||||||||| | || |||||||| |||||||||||| |||||||||||||||||||||  ||||||||| | | ||||||| |||||| | | |||||    
T  24604552 aaaaaatgagttaaggatttttccgaattttgtaatccaaaaacttcaaaaaatagggcgtcttacatgatttcttcggattacataatccgaacacccc 24604453  T
Q  442 ctaaacactctttttcaa-ggtaaaacagttcatattatataatc------ctaacagcacaaattctaaacat 508  Q
     |||||||  |||||||| || |||||||||||||||||||||||      ||| |||||||||||||||||||    
T  24604452 ttaaacaccatttttcaagggaaaaacagttcatattatataatctgaactctatcagcacaaattctaaacat 24604379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 5638879 - 5638975
Alignment:
Q  390 aaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||  |||||||||| ||||||||||||||||||||||  ||||||||||||    
T  5638879 aaaaatagggcgcgttacatgatgtttccggattacataatttgaaaaatccctaaacaccctttttcaaggtaaaacagttcggattatataatcc 5638975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 38 - 176
Target Start/End: Original strand, 31080594 - 31080735
Alignment:
Q  38 catgagtttagacttgtaactttggttttctcttaagatatgtagtataccgcaacaagtcccacatcgagtatacgttaaaaca-gcactgaagtttt- 135  Q
    |||||||||||||||  ||||||||||||||||| | | |||||||||||| ||||||||||||||| ||||||  ||||||||| |||| |||| |||     
T  31080594 catgagtttagacttaaaactttggttttctcttcaaacatgtagtataccacaacaagtcccacatagagtatgtgttaaaacatgcac-gaaggttta 31080692  T
Q  136 --tataaaataagagtgtgtatcacttagtaactcatagttgg 176  Q
      |||||||||||||||| ||| |||||  |||||||||||||    
T  31080693 cctataaaataagagtgtatataacttatcaactcatagttgg 31080735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 418 - 486
Target Start/End: Original strand, 2539496 - 2539564
Alignment:
Q  418 cggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  2539496 cggattacataatctggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatcc 2539564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 31035435 - 31035593
Alignment:
Q  7 ttggagtttcttcttctactgtaaccttgtgc--atgagtttagacttgtaactttggttttctcttaagatatgtagtataccgcaacaagtcccacat 104  Q
    |||||||||||||||||  ||||||||| |||  ||  ||||| ||||| ||||| ||||||||||| | | |||||||||||| |||||||| ||||||    
T  31035435 ttggagtttcttcttctcttgtaaccttctgcgcatttgtttaaacttgaaacttaggttttctcttcaaacatgtagtataccacaacaagttccacat 31035534  T
Q  105 cgagtatacgttaaaacagcactgaagtttt---tataaaataagagtgtgtatcactt 160  Q
    |||||||  ||||||||||   ||||| |||   ||||||| |||||||| ||||||||    
T  31035535 cgagtatgtgttaaaacagtcatgaaggttttcctataaaagaagagtgtatatcactt 31035593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 359 - 447
Target Start/End: Original strand, 9905104 - 9905192
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaac 447  Q
    ||||||||||||||||||| || ||| |||||||||||||||||| ||| |||| ||||||||||| |||||| | | |||||||||||    
T  9905104 tttttccggattttgtaattcggaaatttcaaaaaatagggcgcgctacgtgatttttccggattacataatccgaacaccccctaaac 9905192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 471
Target Start/End: Complemental strand, 21517670 - 21517542
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||| |||||| ||||||||||||          | |||| |||||||||||||| | ||||| |||||||||||||| |||||      
T  21517670 taaagggtgaaaaaatgaataacggatttttccggatt----------acaactccaaaaaatagggcgtgctacataatgtttccggattacataattc 21517581  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagtt 471  Q
    ||||||||| |||||||  |||||||| |||||||||||    
T  21517580 ggaaaccccttaaacaccatttttcaaagtaaaacagtt 21517542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 31069919 - 31070097
Alignment:
Q  4 atattggagtttcttcttctactgtaaccttgtgcatgagtttagacttgtaactttggtt-ttctcttaagatatgtagtataccgcaacaagtcccac 102  Q
    |||||||||||||| | |||  ||||||||| |||||||||||||| ||| |||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  31069919 atattggagtttctgcatctcttgtaacctt-tgcatgagtttagatttg-aactttggttattctcttaagacatgtagtataccacagctagtcccac 31070016  T
Q  103 atcgagtatacgttaaaacagcactgaagtttt---tataaaataagagtgtgtatcacttagtaactcatagttggggac 180  Q
    |||||| ||  || |||||||     ||| |||   |||||||||||||||| ||||||  | ||| ||||||||||||||    
T  31070017 atcgaggatgtgtcaaaacagtcagaaagatttacctataaaataagagtgtatatcaccaattaagtcatagttggggac 31070097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 31110481 - 31110566
Alignment:
Q  37 gcatgagtttagacttgtaactttggttttctcttaagatatgtagtataccgcaacaagtcccacatcgagtatacgttaaaaca 122  Q
    ||||||||||||||||| ||||| ||||||||||| ||  |||||||| ||  |||||| |||||||||||||||  |||||||||    
T  31110481 gcatgagtttagacttgaaacttcggttttctcttcaggcatgtagtaaacaacaacaaatcccacatcgagtatgtgttaaaaca 31110566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 31056712 - 31056806
Alignment:
Q  30 accttgtgcatgagtttagacttgtaactttggtttt-ctcttaagatatgtagtataccgcaacaagtcccacatcgagtatacgttaaaacag 123  Q
    ||||| |||||||||||||||| | ||||||| |||| ||||  |   |||||||||||| ||||||||||||||||||||||  ||||||||||    
T  31056712 accttctgcatgagtttagactcgaaactttgatttttctctacaagcatgtagtataccacaacaagtcccacatcgagtatgtgttaaaacag 31056806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 31045951 - 31046044
Alignment:
Q  91 aacaagtcccacatcgagtatacgttaaaacagcactgaagtttt---tataaaataagagtgtgtatcacttagtaactcatagttggggacc 181  Q
    |||||||||||||||||||||  ||||||||||   ||||| |||   |||||||||||||||| ||||||  | || ||||||||||||||||    
T  31045951 aacaagtcccacatcgagtatgtgttaaaacaggcatgaagatttccctataaaataagagtgtatatcacccattatctcatagttggggacc 31046044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 31027096 - 31027204
Alignment:
Q  77 atgtagtataccgcaacaagtcccacatcgagtatacgttaaaacag-cactgaagtttt--tataaaataagagtgtgtatcacttagtaactcatagt 173  Q
    |||||||||||| |||| |||| ||||||||||||  |||||||||| ||| || ||||   |||||||||||||||| ||||||  | | | |||||||    
T  31027096 atgtagtataccacaactagtctcacatcgagtatgtgttaaaacaggcacagaggtttacctataaaataagagtgtatatcaccaatttagtcatagt 31027195  T
Q  174 tggggacca 182  Q
    |||||||||    
T  31027196 tggggacca 31027204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 31096219 - 31096172
Alignment:
Q  194 ttgttgtggttgttgctgggaattacaagcgattgcatttttaaataa 241  Q
    ||||| ||||||||  ||||||||||||| ||||||||||||||||||    
T  31096219 ttgttttggttgtttttgggaattacaagtgattgcatttttaaataa 31096172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 29289799 - 29289710
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 449  Q
    ||||| |||||||||||||| |||| | | |||||||||| | || ||  |||| |||||||||||||||||||| | ||||| |||||||    
T  29289799 ttttttcggattttgtaatctgaaaccct-aaaaaataggacacgctatttgatttttccggattatataatctgaacaccccttaaacac 29289710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 31110875 - 31110920
Alignment:
Q  194 ttgttgtggttgttgctgggaattacaagcgattgcatttttaaat 239  Q
    ||||||||||||||| ||||  ||||||| ||||||||||||||||    
T  31110875 ttgttgtggttgttgttgggctttacaagtgattgcatttttaaat 31110920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 2e-57; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 333 - 486
Target Start/End: Complemental strand, 32817810 - 32817657
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||     
T  32817810 taaagggtgaaaaaatgagtaacgggtttttccagattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccagattacataatcc 32817711  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    | ||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  32817710 gaaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatcc 32817657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 333 - 486
Target Start/End: Complemental strand, 15070041 - 15069887
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||| ||| ||||||||||||| | ||| |||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||     
T  15070041 taaagggagaacaaatgagtaacggatattttcggattttgtaatccggaaacttcaaaaaataggacgtgttacatgatgtttccggattatataatcc 15069942  T
Q  433 ggaaa-ccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||| ||||||||||||  ||||||||| |||||||||||| ||||||||||||    
T  15069941 ggaaacccccctaaacaccatttttcaagataaaacagttcagattatataatcc 15069887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 33611606 - 33611456
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| ||||| |||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33611606 agggtgaaaaatggagttacggattttttcggattttgtaatttggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctgga 33611507  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||||||||| |||||| ||||||||| |||||  ||||||||||||    
T  33611506 aaccccctaaacacccttttttaaggtaaaatagttcggattatataatcc 33611456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 333 - 508
Target Start/End: Original strand, 42545928 - 42546108
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | || |||     
T  42545928 taaagggtgaaaaa-tgaataacggatttttccggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggataacatgatcc 42546026  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    | ||||||||||| ||| ||||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  42546027 gaaaaccccctaagcaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 42546108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 44573295 - 44573143
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||     
T  44573295 taaagggtgaaaaaatgagtaacagattttttcggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatcc 44573196  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||| ||| ||||| |  ||||||||||||||| |||||  |||||||||||    
T  44573195 ggaaatcccttaaactccttttttcaaggtaaaatagttcggattatataatc 44573143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 359 - 508
Target Start/End: Complemental strand, 34162894 - 34162740
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 458  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  34162894 tttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacaccctttttca 34162795  T
Q  459 aggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||| |||||||||  ||||||||||||      || |||||||||||||||||||    
T  34162794 aggt-aaacagttcgaattatataatccgaactgtatcagcacaaattctaaacat 34162740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 342 - 481
Target Start/End: Complemental strand, 40650865 - 40650726
Alignment:
Q  342 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 441  Q
    |||||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| |||||| |||||||||    
T  40650865 aaaaaatgagtaacggattttttcggaatttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttctggattacataatccggaaacccc 40650766  T
Q  442 ctaaacactctttttcaaggtaaaacagttcatattatat 481  Q
     |||||||  |||||||||||||||||||||  |||||||    
T  40650765 ttaaacaccatttttcaaggtaaaacagttcggattatat 40650726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 368 - 486
Target Start/End: Original strand, 49677478 - 49677596
Alignment:
Q  368 attttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaac 467  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||| | |||||||||||||||    
T  49677478 attttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccagaaaccccctaaacaccccttttcaaggtaaaac 49677577  T
Q  468 agttcatattatataatcc 486  Q
    |||||  ||||||||||||    
T  49677578 agttcggattatataatcc 49677596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 336 - 490
Target Start/End: Original strand, 49786232 - 49786385
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| | || ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |||    
T  49786232 agggtgaaaaatggagttatggatttttccggattttgcaatccgaaaactttaaaaaataggacgcgttacatgatgtttccggattacataatccgga 49786331  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcctaac 490  Q
    ||||||| |||||| |||||| ||| ||||| |||||  ||||||||||||||||    
T  49786332 aaccccc-aaacacccttttttaagataaaatagttcggattatataatcctaac 49786385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 338 - 486
Target Start/End: Original strand, 23442703 - 23442851
Alignment:
Q  338 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa 437  Q
    |||||||||  |||| |||| |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  23442703 ggtgaaaaatggagttacggatttttccggattttataatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataattcggaaa 23442802  T
Q  438 ccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||| |||||   ||||| ||||||||| |||||  ||||||||||||    
T  23442803 ccccccaaacatctttttttaaggtaaaatagttcggattatataatcc 23442851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 341 - 508
Target Start/End: Complemental strand, 45047041 - 45046868
Alignment:
Q  341 gaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccc 440  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||| |||| |||||| ||||||||    
T  45047041 gaaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcaaaaaagagggc-cattacatgatgtttccgaattacataatccggaaaccc 45046943  T
Q  441 cctaaaca-ctctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||| | | ||||||| |||||| |||||  ||| ||||||||      || |||||||||||||||||||    
T  45046942 cctaaacacccccttttcaatgtaaaatagttcggattgtataatccgaactgtatcagcacaaattctaaacat 45046868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 41584866 - 41584716
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||   ||| ||||||||||| ||||||||||||||| ||| |||||||| ||||||  |||||||||||||| ||||||| |||||| |||    
T  41584866 agggtgaaaaatgaagttacgggtttttctggattttgtaatccggaaatttcaaaaactagggcatgttacatgatgttttcggattacataatccgga 41584767  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||||||||  ||||||||||||||| ||||||  ||||||||||||    
T  41584766 aaccccctaaacatcctttttcaaggtaaatcagttcggattatataatcc 41584716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 485
Target Start/End: Complemental strand, 18583740 - 18583591
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||   ||| ||||  ||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| ||||||| |||||| |||    
T  18583740 agggtgaaaaatgaagttacggacttttccggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcggattacataatccgga 18583641  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||||||||  ||||| ||||||||| |||||  |||||||||||    
T  18583640 aaccccctaaacacctttttttaaggtaaaatagttcggattatataatc 18583591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 333 - 468
Target Start/End: Complemental strand, 45568076 - 45567940
Alignment:
Q  333 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 431  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||||||| |||||||| |||  |||||| || |||    
T  45568076 taaagggtgaaaaaaatgagtaacgggtttttccgaattttgtaattcggaaacttcaaaaaatagggcgcgctacatgatatttttggattacatgatc 45567977  T
Q  432 tggaaaccccctaaacactctttttcaaggtaaaaca 468  Q
     | ||||||||||||||| |||||| |||||||||||    
T  45567976 cgaaaaccccctaaacaccctttttaaaggtaaaaca 45567940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 43319395 - 43319272
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| |||  | |||||||| ||||||||||||||| ||| ||||||| ||||||     
T  43319395 taaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctaaaaaaatatggcgcgttacatgattttttcggattacataatcc 43319296  T
Q  433 ggaaaccccctaaacactcttttt 456  Q
    | ||||||||||||||||||||||    
T  43319295 gaaaaccccctaaacactcttttt 43319272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 333 - 482
Target Start/End: Complemental strand, 40908133 - 40907983
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||||| |||||  | |||||| |||||| |||||||||||||| ||||| | |||||||||||| ||||||| ||||||     
T  40908133 taaagggtgaaaaaatgagtaacggattttttagaattttgcaatccggaaacttcaaaaaattgggcgtgctacatgatgttttcggattacataatcc 40908034  T
Q  433 ggaaaccccctaaacactc-tttttcaaggtaaaacagttcatattatata 482  Q
    | ||||||||||||||| | ||||| |||||||||||||||  ||||||||    
T  40908033 gaaaaccccctaaacaccctttttttaaggtaaaacagttcggattatata 40907983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 485
Target Start/End: Original strand, 17000342 - 17000490
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| ||||||||||||||||||| || |||| ||||| |||||||| ||||| |||||||||| |||||| |||||| |||    
T  17000342 agggtgaaaaatggagttacgg-tttttccggattttgtaattcggaaacatcaaataatagggcacgttagatgatgtttctggattacataatccgga 17000440  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||||||||  ||||||||||||||||||||   |||||||||||    
T  17000441 aaccccctaaacaccatttttcaaggtaaaacagtttgaattatataatc 17000490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 333 - 486
Target Start/End: Original strand, 7011169 - 7011323
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttcc-ggattttgtaatccgaaaacttcaaaaaata-gggcgcgttacatgatgtttccggattatataat 430  Q
    |||||||||||||| |||||||||| ||||| | ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| || || ||||    
T  7011169 taaagggtgaaaaa-tgagtaacggattttttctggattttgtaatccggaaacttcaaaaaaaaagggcgcgttacatgatgtttccgaatcatgtaat 7011267  T
Q  431 ctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    | | ||||||||||||||   ||||||||||||||| |||||  ||||||||||||    
T  7011268 ccgaaaaccccctaaacatcatttttcaaggtaaaatagttcggattatataatcc 7011323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 365 - 486
Target Start/End: Original strand, 32542388 - 32542506
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 464  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||||||| ||||||| ||||||  |||||||||||||||| ||||   |||||||    
T  32542388 cggattttgtaatccggaatcttcaaaaaatagggtgcgttacatgatgtttacggattacataatccagaaaccccctaaacacccttt---aaggtaa 32542484  T
Q  465 aacagttcatattatataatcc 486  Q
    || |||||  ||||||||||||    
T  32542485 aatagttcggattatataatcc 32542506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 360 - 486
Target Start/End: Original strand, 34006246 - 34006373
Alignment:
Q  360 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaa 459  Q
    ||||||||||||| ||||||| ||| |||||||||||||||| | |||||||| ||||||||||| ||||| || | ||||| ||||||| |||||||||    
T  34006246 ttttccggattttttaatccggaaaattcaaaaaatagggcgggctacatgatttttccggattacataatttgaacaccccataaacaccctttttcaa 34006345  T
Q  460 -ggtaaaacagttcatattatataatcc 486  Q
     || ||||||||||| ||||||||||||    
T  34006346 gggaaaaacagttcagattatataatcc 34006373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 365 - 456
Target Start/End: Complemental strand, 30829632 - 30829542
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactcttttt 456  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||| |||||| | ||||||||||||||| ||||||    
T  30829632 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgttttcggattacataatccgaaaaccccctaaacacccttttt 30829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 333 - 412
Target Start/End: Complemental strand, 52745016 - 52744937
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 412  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||    
T  52745016 taaagtgtgaaaaaatgagtaacggatttttccgaattttgtaatctgaaaacttcaaaaaatagggcgcgctacatgat 52744937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 6223934 - 6223782
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaa-aaaatagggcgcgttacatgatgtttccggattatataatctgg 434  Q
    ||||||||||||||||| |||| ||||| || |||||  |||||||||||||||| ||||||| |||| ||||||||| |||  |||||| |||||| |     
T  6223934 agggtgaaaaaatgagttacggattttttcgaatttttcaatccgaaaacttcaaaaaaatagagcgcattacatgatttttttggattacataatccga 6223835  T
Q  435 aaaccccctaaacactctttttcaaggt-aaaacagttcatattatataatcc 486  Q
    | ||||| ||||||  |||||||||||| ||||||||||  ||||||||||||    
T  6223834 acaccccataaacatcctttttcaaggtaaaaacagttcggattatataatcc 6223782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 359 - 485
Target Start/End: Complemental strand, 28866803 - 28866677
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 458  Q
    |||||||||||||||||||||| || ||  ||||||||||||||| |||||||| ||||||||||| |||||||| | |||| |||||||| |||||| |    
T  28866803 tttttccggattttgtaatccggaa-ctataaaaaatagggcgcgctacatgatttttccggattacataatctgaacacccgctaaacaccctttttaa 28866705  T
Q  459 a-ggtaaaacagttcatattatataatc 485  Q
    | || ||||||||||  |||||||||||    
T  28866704 agggaaaaacagttcggattatataatc 28866677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 365 - 456
Target Start/End: Complemental strand, 24471481 - 24471390
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa-ccccctaaacactcttttt 456  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||| | ||| |||||||||||| ||||||    
T  24471481 cggattttgtaatccagaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatccgaaaacccccctaaacacccttttt 24471390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 333 - 508
Target Start/End: Original strand, 38885199 - 38885368
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||| | ||||||||||||           | |||| |||||| |||||| ||||||||||||||| | |||| ||||||     
T  38885199 taaagggtgaaaaaatgagtaacagatttttccggatt-----------acacttaaaaaaagagggcgtgttacatgatgtttcag-attacataatcc 38885286  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    ||||||||| ||||||| |||||||||||||||||| |||  ||||||||||||      || |||||||||||||||||||    
T  38885287 ggaaaccccttaaacaccctttttcaaggtaaaacatttcggattatataatccgaactgtatcagcacaaattctaaacat 38885368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 365 - 449
Target Start/End: Complemental strand, 800969 - 800885
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 449  Q
    ||||||||||||||||||||  |||||||||||||||| |||  |||| ||| ||||||||| |||| | | |||||||||||||    
T  800969 cggattttgtaatccgaaaatctcaaaaaatagggcgctttatttgattttttcggattatagaatccgaacaccccctaaacac 800885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 27794818 - 27794903
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggat 422  Q
    ||||||||||||||||| | || ||||| | ||||||||||||||||||  || ||||||||||||| ||||||||| ||| |||||    
T  27794818 agggtgaaaaaatgagttatggattttttcagattttgtaatccgaaaatctc-aaaaatagggcgctttacatgattttttcggat 27794903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 38950286 - 38950352
Alignment:
Q  390 aaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactcttttt 456  Q
    ||||||||||||||||||||||| ||| | ||||| |||||| | |||| |||||||||||||||||    
T  38950286 aaaaatagggcgcgttacatgattttttcagattacataatccgaaaactccctaaacactcttttt 38950352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 26723649 - 26723597
Alignment:
Q  366 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccg 419  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||| ||||||    
T  26723649 ggattttgtaatccggaaacttcaaaaaatagggcg-gctacatgatttttccg 26723597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 431
Target Start/End: Original strand, 890500 - 890566
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 431  Q
    |||||||| |||||||||||| ||||||||||||||| ||| | || | ||| ||||||||| ||||    
T  890500 cggattttataatccgaaaacctcaaaaaatagggcgtgttccctgcttttttcggattatagaatc 890566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 9446221 - 9446183
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcg 403  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  9446221 cggattttgtaatccgaaaatctcaaaaaatagggcgcg 9446183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 24472995 - 24472950
Alignment:
Q  367 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 412  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||    
T  24472995 gattttataatccgaaaacttcaaaaaatagggtgcgctacttgat 24472950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 6e-54; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 336 - 508
Target Start/End: Original strand, 15799150 - 15799328
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| | |    
T  15799150 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaa 15799249  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||||||||| ||||||||| |||||||| |||| ||||||||||||      || |||||||||||||||||||    
T  15799250 aaccccctaaacaccctttttcaacgtaaaacatttcagattatataatccgaactgtatcagcacaaattctaaacat 15799328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 333 - 508
Target Start/End: Original strand, 38372231 - 38372412
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| |||||      
T  38372231 taaagggtgaaaaaatgagtaacggatttttctggattttgtaatccggaaacttaaaaaaatagggcgggttacatgatgtttccggattacataattc 38372330  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcctaac------agcacaaattctaaacat 508  Q
    ||||||||| |||| || ||||||||||||||||||||||| |||||||||||| |||      ||||||||||||||||||    
T  38372331 ggaaaccccttaaataccctttttcaaggtaaaacagttcagattatataatccgaactgtattagcacaaattctaaacat 38372412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 333 - 508
Target Start/End: Complemental strand, 38692982 - 38692801
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggttttt-ccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 431  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  38692982 taaagggtgaaaaaatgagtaacgggttttttccgaattttgtaatccggaaacttaaaaaaatagggcgcgttacgtgatgtttccggattacataatc 38692883  T
Q  432 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
     ||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  38692882 cggaaa-cccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 38692801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 338 - 484
Target Start/End: Original strand, 6156658 - 6156804
Alignment:
Q  338 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa 437  Q
    |||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6156658 ggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaa 6156757  T
Q  438 ccccctaaacactctttttcaaggtaaaacagttcatattatataat 484  Q
    |||||||||||| || |||||||||||||| ||||  ||||||||||    
T  6156758 ccccctaaacaccctctttcaaggtaaaaccgttcggattatataat 6156804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 333 - 486
Target Start/End: Complemental strand, 28083577 - 28083424
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||| ||||||     
T  28083577 taaagggtgagaaaatgagtaacgggtttttccggattttgtaatccggaaaattcaaaaaatagggcgcattacatgatatttccggattacataatcc 28083478  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||| |||||||| ||||||||| |||||||||| |  ||||||||||||    
T  28083477 ggaaaccctctaaacaccctttttcaacgtaaaacagtccggattatataatcc 28083424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 333 - 486
Target Start/End: Original strand, 39524698 - 39524851
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||| || || |||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||| |||||      
T  39524698 taaagggtgaaaaaatgagcaatggatttttccggattttgtaatccggaaacttaaaaaaatagggcgtgttacatgatgttttcggattacataattc 39524797  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  39524798 ggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatcc 39524851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 336 - 508
Target Start/End: Complemental strand, 4064916 - 4064738
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| ||||||||||||||||| ||||||||| |||||| ||||||||||||| |||| ||||||||||||||||| |||||| |||    
T  4064916 agggtgaaaaatggagttacgggtttttccggattatgtaatccggaaactttaaaaaatagggcgtgttagatgatgtttccggattacataatccgga 4064817  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  4064816 aaccccctaaacaccctttttcaaggtaaaacagttcgaattatataatccgaactttatcagcacaaattctaaacat 4064738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 342 - 485
Target Start/End: Original strand, 20891544 - 20891687
Alignment:
Q  342 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 441  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||| |||| |||||| | |||||||    
T  20891544 aaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttccgaattacataatccgaaaacccc 20891643  T
Q  442 ctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    |||||||| ||||||||||||||||||||||  |||||||||||    
T  20891644 ctaaacaccctttttcaaggtaaaacagttcggattatataatc 20891687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 342 - 508
Target Start/End: Original strand, 38871602 - 38871774
Alignment:
Q  342 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 441  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||| | ||||||     
T  38871602 aaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcataaaatagggggcgttacatgatgtttccggattacataatccgaaaaccct 38871701  T
Q  442 ctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||   |||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  38871702 ctaaacatcttttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 38871774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 335 - 486
Target Start/End: Complemental strand, 40620187 - 40620036
Alignment:
Q  335 aagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgg 434  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||||| |||||| ||    
T  40620187 aagggtgaaaaaatgagtaacagatttttccggattttgtaatccggaaacttcaaaaaatagggcacgttatatgatgttttcggattacataatccgg 40620088  T
Q  435 aaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||||||||||||   ||||||||||||||| | |||| ||||||||||||    
T  40620087 aaaccccctaaacatcatttttcaaggtaaaatatttcagattatataatcc 40620036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 336 - 486
Target Start/End: Original strand, 33487535 - 33487685
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||| |||    
T  33487535 agggtgaaaaatggagttacgggtttttccgaattttgtaatccgaaaacttcaaaaaatagggcgcgttatatgatgttttcgggttacataatccgga 33487634  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||| |||||||||| | ||||||||||||||||||||  ||||||||||||    
T  33487635 aactccctaaacaccccttttcaaggtaaaacagttcggattatataatcc 33487685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 339 - 508
Target Start/End: Original strand, 25746954 - 25747128
Alignment:
Q  339 gtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaac 438  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||     
T  25746954 gtgaaaaaatgagtaacggatttttccggattttctaatccggaaacttcaaaa-atagggcgcgttacatgatgttttcggattacataatccggaaat 25747052  T
Q  439 cccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||||||  ||||| |||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  25747053 cccctaaacaccattttttaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 25747128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 333 - 485
Target Start/End: Original strand, 15957672 - 15957823
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||| |||||||| || ||||||||||||||||||| || ||||||| ||||||||||||  ||||||||||||||||||||| ||||||     
T  15957672 taaagggtgaaaa-atgagtaatggatttttccggattttgtaattcggaaacttcgaaaaatagggcgtattacatgatgtttccggattaaataatcc 15957770  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    ||||||||||||||||| | |||||||||||||||||||   |||||||||||    
T  15957771 ggaaaccccctaaacacccattttcaaggtaaaacagtttggattatataatc 15957823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 337 - 486
Target Start/End: Complemental strand, 26190493 - 26190344
Alignment:
Q  337 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaa 436  Q
    ||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||| |||||   |||    
T  26190493 gggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgttttcggattacataattcagaa 26190394  T
Q  437 accccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||||||||||| |||||| ||||||||| |||||  ||||||||||||    
T  26190393 accccctaaacacccttttttaaggtaaaatagttcggattatataatcc 26190344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 367 - 486
Target Start/End: Complemental strand, 31221504 - 31221385
Alignment:
Q  367 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaa 466  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||||||| |||||||| ||||||||||||||||    
T  31221504 gattctgtaatccgaaaacttcaaaaaatatggcgcgttacatgatgtttctggattacataatccggaaaccctctaaacaccctttttcaaggtaaaa 31221405  T
Q  467 cagttcatattatataatcc 486  Q
    ||||||  ||||||||||||    
T  31221404 cagttcggattatataatcc 31221385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 333 - 486
Target Start/End: Complemental strand, 24203879 - 24203730
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||| |||||||| |||| | ||||| ||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| ||||||     
T  24203879 taaagggtggaaaaatgattaacagattttttcggattttgtaatcg----acttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 24203784  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    ||||||||||||||||| |||||| | |||||||||||||   |||||||||||    
T  24203783 ggaaaccccctaaacacccttttttagggtaaaacagttcgggttatataatcc 24203730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 381 - 508
Target Start/End: Original strand, 29862582 - 29862715
Alignment:
Q  381 aaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattata 480  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||||||||  ||||||    
T  29862582 aaaacttcaaaaaatagggcgcgttaggtgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagttcgaattata 29862681  T
Q  481 taatcc------taacagcacaaattctaaacat 508  Q
    ||||||      || |||||||||||||||||||    
T  29862682 taatccgaactgtatcagcacaaattctaaacat 29862715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 12465302 - 12465156
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||   |||| |||    
T  12465302 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggatta---aatccgga 12465206  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    || |||||||||||  |||||  |||||||| |||||  | ||||||||||    
T  12465205 aa-cccctaaacaccatttttttaggtaaaatagttctgagtatataatcc 12465156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 336 - 484
Target Start/End: Original strand, 27212633 - 27212782
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||  ||||||||||||| |||||||||||| ||| ||||||| |||| | | |    
T  27212633 agggtgaaaaaatgagttacgggttttttcggattttgtaatccgaaaatctcaaaaaatagggtgcgttacatgattttttcggattacataaccagaa 27212732  T
Q  436 aaccccctaaacactctttttcaa-ggtaaaacagttcatattatataat 484  Q
     || |||| ||||| |||||| || || ||||||||||  ||||||||||    
T  27212733 cacaccctgaacaccctttttgaagggaaaaacagttcggattatataat 27212782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 26319043 - 26319162
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||| |||||||||||||||| ||||| ||||||| |||| ||||| |||||||||||||||||||||||| |||||| | |    
T  26319043 agggtgaaaaatggagttacggatttttccggattttgttatccggaaacttccaaaa-tagggtgcgttacatgatgtttccggattacataatccgaa 26319141  T
Q  436 aaccccctaaacactcttttt 456  Q
    |||||||||||||| ||||||    
T  26319142 aaccccctaaacacccttttt 26319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 365 - 460
Target Start/End: Original strand, 14111851 - 14111946
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaag 460  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||  |||||| |||||||| ||| ||||||||||| ||||||||||    
T  14111851 cggattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttttggattacataatctgaaaatcccctaaacaccctttttcaag 14111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 337 - 470
Target Start/End: Complemental strand, 37183977 - 37183843
Alignment:
Q  337 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaa 436  Q
    ||||||||||||||||||| | ||||||  ||||||||||||   ||||||||||||||||||| ||||||||||| ||| | ||||| |||||| ||||    
T  37183977 gggtgaaaaaatgagtaacagatttttctagattttgtaatcttgaaacttcaaaaaatagggcacgttacatgatattttcagattacataatccggaa 37183878  T
Q  437 accccctaaacactc-tttttcaaggtaaaacagt 470  Q
    |||| |||||||| | |||||||||| ||||||||    
T  37183877 accctctaaacacccttttttcaaggcaaaacagt 37183843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 37095110 - 37095023
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggatta 424  Q
    |||||||||||  |||| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  37095110 agggtgaaaaatggagttacggatttttccggattttgtaatccgaaaactt-aaaaaataaggcgcgttacatgatgtttccggatta 37095023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 365 - 456
Target Start/End: Original strand, 34440688 - 34440778
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactcttttt 456  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||  |||||| | ||||||||||||||| ||||||    
T  34440688 cggattttgtaatccgaaaacttcaaaaa-taggacgcgttacatgatgttttcggattgcataatccgaaaaccccctaaacacccttttt 34440778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 32842145 - 32842019
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 458  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || || || ||||  ||||| |||||| | | ||||| ||||||| ||||||||    
T  32842145 tttttccggattttgtaatccggaaacttcaaaaaatagggcgcgctagataatttttcaagattacataatccgaacaccccataaacaccctttttca 32842046  T
Q  459 a-ggtaaaacagttcatattatataat 484  Q
    | || ||||||||||  ||||||||||    
T  32842045 agggaaaaacagttcggattatataat 32842019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 333 - 449
Target Start/End: Complemental strand, 36359784 - 36359669
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||| ||||| ||||  |||| |||||||||||||||  |||  |||||||||||| ||||| ||||||| ||| ||||||| |||||||    
T  36359784 taaagggtgaaaaa-tgagttacggaatttttcggattttgtaatccagaaatctcaaaaaataggacgcgtaacatgattttttcggattacataatct 36359686  T
Q  433 ggaaaccccctaaacac 449  Q
    | |||||||||||||||    
T  36359685 gaaaaccccctaaacac 36359669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 359 - 466
Target Start/End: Original strand, 8032219 - 8032326
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 458  Q
    ||||| |||||||||||||| | ||| ||||||||||||||| | ||||||||| ||||||||||| |||||| | | ||| ||||||||| ||||||||    
T  8032219 ttttttcggattttgtaatctggaaatttcaaaaaatagggcacattacatgatttttccggattacataatccgaacacctcctaaacaccctttttca 8032318  T
Q  459 aggtaaaa 466  Q
    ||| ||||    
T  8032319 agggaaaa 8032326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 31929304 - 31929229
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacat 409  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||  ||| ||||||||||||||||| ||||||    
T  31929304 taaagggtgaaaaa-tgagtaacggatttttccggattttgtaatccagaaatttcaaaaaatagggcgcattacat 31929229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 367 - 485
Target Start/End: Original strand, 26095047 - 26095166
Alignment:
Q  367 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttc-aaggtaaa 465  Q
    ||||||||||||| |||||  |||||||||| |||||||||||  | ||| ||||||| |||||| | | ||||| ||||||||||||||| |||| |||    
T  26095047 gattttgtaatccaaaaaccacaaaaaatagagcgcgttacatatttttttcggattacataatccgaacaccccataaacactctttttcaaaggaaaa 26095146  T
Q  466 acagttcatattatataatc 485  Q
    | |||||  |||||||||||    
T  26095147 atagttcggattatataatc 26095166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 426 - 485
Target Start/End: Complemental strand, 31929230 - 31929171
Alignment:
Q  426 ataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||||  |||||||||||    
T  31929230 ataatccggaaaccccctaaacaccccttttcaaggtaaaacagttcggattatataatc 31929171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 359 - 412
Target Start/End: Original strand, 34529976 - 34530029
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 412  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  34529976 ttttttcggattttgtaatccaaaaacctcaaaaaatagggcgtgttacatgat 34530029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 486
Target Start/End: Original strand, 13908545 - 13908623
Alignment:
Q  409 tgatgtttccggattatataatctggaaaccccctaaacactctttttcaa-ggtaaaacagttcatattatataatcc 486  Q
    |||| ||| ||||||||||||| || | ||| ||||||||||||||||||| || ||||||||||  ||||||||||||    
T  13908545 tgattttttcggattatataatttgaacacctcctaaacactctttttcaagggaaaaacagttcggattatataatcc 13908623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 28108308 - 28108350
Alignment:
Q  338 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccg 380  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  28108308 ggtgagaaaatgagtaacgggtttttccagattttgtaatccg 28108350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 11186341 - 11186282
Alignment:
Q  367 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattata 426  Q
    |||||| |||||||||||| ||||||||||||||||||| | || | ||| |||||||||    
T  11186341 gattttataatccgaaaacctcaaaaaatagggcgcgttccttgcttttttcggattata 11186282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 28445578 - 28445540
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcg 403  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  28445578 cggattttgtaatccgaaaatctcaaaaaatagggcgcg 28445540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 43388259 - 43388189
Alignment:
Q  342 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 412  Q
    ||||||||||| |||| || ||  ||||||||||||||| |||  | |||||||||||||| |||||||||    
T  43388259 aaaaaatgagttacggattcttttggattttgtaatccggaaatctaaaaaaatagggcgcattacatgat 43388189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 333 - 466
Target Start/End: Complemental strand, 47740131 - 47739998
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  47740131 taaagggtgaaaaaatgagcaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 47740032  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaa 466  Q
    ||||||||||||||||| ||||||||||||||||    
T  47740031 ggaaaccccctaaacaccctttttcaaggtaaaa 47739998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 336 - 485
Target Start/End: Original strand, 50716215 - 50716364
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||    
T  50716215 agggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccgga 50716314  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    |||||||||||||| |||||||||||||||||| |||  |||||||||||    
T  50716315 aaccccctaaacaccctttttcaaggtaaaacaattcggattatataatc 50716364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 336 - 485
Target Start/End: Complemental strand, 50796632 - 50796483
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||    
T  50796632 agggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccgga 50796533  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    |||||||||||||| |||||||||||||||||| |||  |||||||||||    
T  50796532 aaccccctaaacaccctttttcaaggtaaaacaattcggattatataatc 50796483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 336 - 508
Target Start/End: Complemental strand, 3903002 - 3902824
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    ||||||||||   |||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||| |||    
T  3903002 agggtgaaaagtggagttactggtttttccggattttgtaatccgaaaacttcaaaaaatagagcgcgttacatgatgtttttggattacataatccgga 3902903  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  3902902 aaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 3902824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 333 - 486
Target Start/End: Complemental strand, 38977947 - 38977794
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||| |||||||| ||||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||  |||||| ||||||     
T  38977947 taaagggtgaaaaaataagtaacggatttttctagattttgtaatccggaaacttcaaaaaatagggcgcgttacatggtgttttgggattacataatcc 38977848  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    | |||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  38977847 gaaaaccccctaaacaccttttttcaaggtaaaacagttcaaattatataatcc 38977794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 342 - 485
Target Start/End: Complemental strand, 51540804 - 51540661
Alignment:
Q  342 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 441  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||    
T  51540804 aaaaaatgagtaacggatttttctggattttggaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccgaattacataatccggaaacccc 51540705  T
Q  442 ctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
     |||||||  |||||||||||||||||||||  |||||||||||    
T  51540704 ttaaacaccgtttttcaaggtaaaacagttcggattatataatc 51540661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 333 - 484
Target Start/End: Original strand, 35142037 - 35142185
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||   ||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||     
T  35142037 taaagggtgaaaaaa---gtaacggatttttccgggttttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattacataatcc 35142133  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat 484  Q
    |||||||||||||||||  ||||| |||||||||||||||  ||||||||||    
T  35142134 ggaaaccccctaaacaccattttttaaggtaaaacagttcggattatataat 35142185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 340 - 508
Target Start/End: Complemental strand, 46622977 - 46622802
Alignment:
Q  340 tgaaaaaatgagtaacgggtttttccggattttgtaat-ccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaac 438  Q
    |||||||||||||||||| |||||||||||||| |||  ||| ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||    
T  46622977 tgaaaaaatgagtaacggatttttccggattttataaaaccggaaacttcaaaaaataggacacgttacatgatgtttccggattacataatctggaaac 46622878  T
Q  439 cccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    |||||||||||  |||||||| ||||||||||||  ||||||||||||      || |||||||||||||||||||    
T  46622877 cccctaaacaccatttttcaaagtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacat 46622802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 333 - 486
Target Start/End: Original strand, 39149770 - 39149922
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||| || ||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||  ||||||||||||| ||||||     
T  39149770 taaagggtgaaaaaattagcaacggatttttccggattttgtaatccagaaact-caaaaaatagggcgcgttacatagtgtttccggattacataatcc 39149868  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||||||||||||  |||||||||||||||||||||   |||||||||||    
T  39149869 ggaaaccccctaaacaccatttttcaaggtaaaacagttcgggttatataatcc 39149922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 337 - 485
Target Start/End: Original strand, 33438486 - 33438633
Alignment:
Q  337 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaa 436  Q
    |||||||||||| |||||||| |||||| | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  33438486 gggtgaaaaaataagtaacggatttttctgaattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatg-ttccggattacataatgtggaa 33438584  T
Q  437 accccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    |||| | ||||||  |||||||||||||||||||||  |||||||||||    
T  33438585 accctcaaaacaccatttttcaaggtaaaacagttcggattatataatc 33438633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 358 - 508
Target Start/End: Complemental strand, 501315 - 501159
Alignment:
Q  358 gtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgg-aaaccccctaaacactcttttt 456  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||| || |||||||||||||||  |||||    
T  501315 gtttttccggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattgcataatccggaaaaccccctaaacacctttttt 501216  T
Q  457 caaggtaaaacagttcatattatataatcctaac------agcacaaattctaaacat 508  Q
    ||||||||||||||||  |||||||||||| |||      ||||||||||||||||||    
T  501215 caaggtaaaacagttc-gattatataatccgaactgtataagcacaaattctaaacat 501159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 3352266 - 3352113
Alignment:
Q  333 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 431  Q
    ||||||||||||||| |||||||||  |||||||  ||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||| |||||     
T  3352266 taaagggtgaaaaaaatgagtaacgaatttttccaaattttgtaatcaggaaacttaaaaaaatagggtgcgttacatgatgtttccggattacataatt 3352167  T
Q  432 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
     ||||||||||||||||| |||| |||||||||||||||||  |||||||||||    
T  3352166 cggaaaccccctaaacaccctttatcaaggtaaaacagttcgaattatataatc 3352113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 361 - 485
Target Start/End: Complemental strand, 34821514 - 34821390
Alignment:
Q  361 tttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaag 460  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||  |||||||||    
T  34821514 tttccgaattttgtaatccggaaacttcaaaaaatagagcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttttcaag 34821415  T
Q  461 gtaaaacagttcatattatataatc 485  Q
    |||||| |||||  |||||||||||    
T  34821414 gtaaaatagttcggattatataatc 34821390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 336 - 486
Target Start/End: Original strand, 47301982 - 47302133
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| | || |||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| |||||| | |    
T  47301982 agggtgaaaaatggagttatggatttttccggattttgtaatccggaaacttaaaaaaataaggcgcgttacatgatgtttccggattacataatccgaa 47302081  T
Q  436 aaccccctaaacactc-tttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||| ||||||||| | ||||| ||||||||| |||||  ||||||||||||    
T  47302082 aacctcctaaacaccctttttttaaggtaaaatagttcggattatataatcc 47302133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 34821595 - 34821490
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| | |||||     
T  34821595 taaagggtgaaaaaatgagtaacggaattttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacctgatgtttccgaattttgtaatcc 34821496  T
Q  433 ggaaac 438  Q
    ||||||    
T  34821495 ggaaac 34821490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 2358819 - 2358668
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttccggattatataatctgg 434  Q
    |||||||||||  |||| |||| |||| | ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||| |||||| ||    
T  2358819 agggtgaaaaatggagttacggattttcctggattttgtaatccggaaacttcaaaaaaatagggcgtgttacatgatgtttccggcttacataatccgg 2358720  T
Q  435 aaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||| | |||||| |||||| ||||||||| |||||  ||||||||||||    
T  2358719 aaaccctccaaacacccttttttaaggtaaaatagttcggattatataatcc 2358668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 333 - 466
Target Start/End: Original strand, 51258363 - 51258495
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||  ||| |||||||||||||||||||||||| || ||| ||||||| ||||||     
T  51258363 taaagggtgaaaaa-tgagttacggatttttccggattttgtaatccataaatttcaaaaaatagggcgcgttacataattttttcggattacataatcc 51258461  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaa 466  Q
    | | |||||||||||||  |||||||||| ||||    
T  51258462 gaacaccccctaaacaccatttttcaagggaaaa 51258495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 336 - 485
Target Start/End: Original strand, 28872966 - 28873117
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||   ||| ||| ||||||| ||||||| ||||||||||| ||||||||||||| |||||||||| |||||||||||||| ||||||        
T  28872966 agggtgaaaaatgaagttacgagtttttctggattttataatccgaaaatttcaaaaaataggacgcgttacattatgtttccggattacataatccaac 28873065  T
Q  436 aaccccctaaaca--ctctttttcaaggtaaaacagttcatattatataatc 485  Q
    |||||||||||||  || ||||| |||||||||||||||  |||||||||||    
T  28873066 aaccccctaaacacccttttttttaaggtaaaacagttcggattatataatc 28873117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 365 - 484
Target Start/End: Original strand, 52777223 - 52777342
Alignment:
Q  365 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactc-tttttcaaggta 463  Q
    |||||||||||||||| |||||||||||| ||| || | ||||||||||||||||||||| |||||  ||||||||||||||||| | ||||||||||||    
T  52777223 cggattttgtaatccggaaacttcaaaaa-tagagcactttacatgatgtttccggattacataataaggaaaccccctaaacacccttttttcaaggta 52777321  T
Q  464 aaacagttcatattatataat 484  Q
    |||||||||  ||||||||||    
T  52777322 aaacagttcggattatataat 52777342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 47123066 - 47123135
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgc 402  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  47123066 taaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47123135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 47130432 - 47130501
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgc 402  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  47130432 taaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 333 - 449
Target Start/End: Original strand, 48303951 - 48304067
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| |||  ||||||||||||| | |||||||||| ||| | ||||| ||||||     
T  48303951 taaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctcaaaaaatagggtgtgttacatgattttttcagattacataatcc 48304050  T
Q  433 ggaaaccccctaaacac 449  Q
    | ||||||||| |||||    
T  48304051 gaaaaccccctcaacac 48304067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 383 - 486
Target Start/End: Complemental strand, 43473118 - 43473015
Alignment:
Q  383 aacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatata 482  Q
    |||||||||||||| || || ||||||||||||||||||||| |||||| |||||||||||||||||  ||||| ||||||||| |||||  ||||||||    
T  43473118 aacttcaaaaaatatggtgcattacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaatagttcgaattatata 43473019  T
Q  483 atcc 486  Q
    ||||    
T  43473018 atcc 43473015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 340 - 439
Target Start/End: Original strand, 45244356 - 45244455
Alignment:
Q  340 tgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacc 439  Q
    ||||||||||||| | || ||||||||||||||||||| ||||||  |||||||||||||||||||||||||| ||| ||||||| |||||||| |||||    
T  45244356 tgaaaaaatgagttatggatttttccggattttgtaattcgaaaatctcaaaaaatagggcgcgttacatgattttttcggattacataatctgaaaacc 45244455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 340 - 430
Target Start/End: Original strand, 3937355 - 3937445
Alignment:
Q  340 tgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataat 430  Q
    |||||||  |||| ||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  3937355 tgaaaaatggagttacgagtttttccgaattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataat 3937445  T

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Target: chr3; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 49096425 - 49096274
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||| | ||| |||| |||||||||||||||||||||| |||  |||||||||| |||  |||||||||| ||| || |||| ||||||     
T  49096425 taaagggtgaaaaa-taagttacggatttttccggattttgtaatccggaaatctcaaaaaatatggcatgttacatgattttttcgaattacataatcc 49096327  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
      | ||||||||||||  ||||||||||| |||||||||   |||||||||||    
T  49096326 aaacaccccctaaacagcctttttcaaggaaaaacagtttgaattatataatc 49096274  T

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Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 367 - 508
Target Start/End: Complemental strand, 30721974 - 30721822
Alignment:
Q  367 gattttgtaatccgaaaacttcaaaaaatagggcgc---gttacatgatgtttccggattatataatctggaaac-cccctaaacactctttttcaa-gg 461  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||| ||| ||||||| |||||| | | || |||||||||||  |||||||| ||    
T  30721974 gattttgtaatccgaaaacttcaaaaaatagggcgcaatattacatgattttttcggattacataatccgaacactcccctaaacaccatttttcaaggg 30721875  T
Q  462 taaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
     |||| |||||| ||||||||||||      || |||||||||||||||||||    
T  30721874 aaaaatagttcagattatataatccgaactgtatcagcacaaattctaaacat 30721822  T

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Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 409
Target Start/End: Original strand, 42936686 - 42936736
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacat 409  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  42936686 tttttccggattttgtaatccgaaaacttcaaaaaatagggtgcgctacat 42936736  T

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Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 449
Target Start/End: Original strand, 32024985 - 32025059
Alignment:
Q  375 aatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 449  Q
    ||||||||||  ||||||||||||||||  || ||||| ||| ||||||||| |||||| | |||||||||||||    
T  32024985 aatccgaaaatctcaaaaaatagggcgcactatatgattttttcggattatagaatctgaacaccccctaaacac 32025059  T

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Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 437 - 485
Target Start/End: Complemental strand, 27143511 - 27143463
Alignment:
Q  437 accccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    |||| |||||||| ||||||||||| ||||||||||| |||||||||||    
T  27143511 accctctaaacaccctttttcaaggaaaaacagttcaaattatataatc 27143463  T

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Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 394
Target Start/End: Original strand, 33700775 - 33700810
Alignment:
Q  359 tttttccggattttgtaatccgaaaacttcaaaaaa 394  Q
    ||||||| ||||||||||||||||||||||||||||    
T  33700775 tttttccagattttgtaatccgaaaacttcaaaaaa 33700810  T

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Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 459
Target Start/End: Complemental strand, 47980125 - 47980080
Alignment:
Q  414 tttccggattatataatctggaaaccccctaaacactctttttcaa 459  Q
    ||||||||||||| |||||| | |||||||||||||| ||||||||    
T  47980125 tttccggattatagaatctgaacaccccctaaacactttttttcaa 47980080  T

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Target: scaffold0027 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 333 - 508
Target Start/End: Complemental strand, 142161 - 141981
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 432  Q
    |||||||||||||| || ||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  142161 taaagggtgaaaaa-tgtgtaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 142063  T
Q  433 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------taacagcacaaattctaaacat 508  Q
    ||||||||||||||||| ||||||||||||||||  ||| | ||||||||||||      || |||||||||||||||||||    
T  142062 ggaaaccccctaaacaccctttttcaaggtaaaattgttgagattatataatccgaactgtatcagcacaaattctaaacat 141981  T

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Target: scaffold0137 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 336 - 486
Target Start/End: Complemental strand, 9693 - 9543
Alignment:
Q  336 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 435  Q
    |||||||||||  |||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| | |    
T  9693 agggtgaaaaatagagttacgggtttttccgaattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccgaa 9594  T
Q  436 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc 486  Q
    |||||||| ||||| ||||||||| ||||||||||||  ||||||||||||    
T  9593 aaccccctgaacaccctttttcaaagtaaaacagttcggattatataatcc 9543  T

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Target: scaffold0508 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 3596 - 3442
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttc--cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataat 430  Q
    ||||||||||||||||||||||||  |||||   || |||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3596 taaagggtgaaaaaatgagtaacgaattttttttcgaattttgtaatctagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataat 3497  T
Q  431 ctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 485  Q
    | ||||||||| ||||||| ||||||||||||||||||||||  |||||||||||    
T  3496 ccggaaaccccataaacaccctttttcaaggtaaaacagttcggattatataatc 3442  T

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Target: scaffold0182 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 471
Target Start/End: Original strand, 23092 - 23220
Alignment:
Q  343 aaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccc 442  Q
    ||||||||||||||| |||||||| ||||| ||||||| |||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  23092 aaaaatgagtaacggatttttccgaattttataatccggaaacttcaaaaaatagggtgcattacatgatgtttccggattatataatccggaaaccccc 23191  T
Q  443 taaacactctttttcaaggtaaaacagtt 471  Q
    |||||||  ||||||||  ||||||||||    
T  23192 taaacaccttttttcaaaataaaacagtt 23220  T

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Target: scaffold0018 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 170779 - 170686
Alignment:
Q  91 aacaagtcccacatcgagtatacgttaaaacagcactgaagtttt---tataaaataagagtgtgtatcacttagtaactcatagttggggacc 181  Q
    |||||||||||||||||||||| |||||||||     |||| |||   |||||||||||||||||||||||||| |||| ||||||||||||||    
T  170779 aacaagtcccacatcgagtatatgttaaaacatagaagaaggtttacctataaaataagagtgtgtatcacttattaacccatagttggggacc 170686  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 333 - 377
Target Start/End: Original strand, 140568 - 140612
Alignment:
Q  333 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaat 377  Q
    |||| ||||||||||||||||| || |||||||||||||||||||    
T  140568 taaaaggtgaaaaaatgagtaaaggatttttccggattttgtaat 140612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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